View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18355_low_12 (Length: 364)

Name: NF18355_low_12
Description: NF18355
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18355_low_12
NF18355_low_12
[»] chr3 (23 HSPs)
chr3 (1-225)||(34898023-34898247)
chr3 (274-343)||(2229987-2230056)
chr3 (274-343)||(19830433-19830502)
chr3 (274-343)||(43719949-43720018)
chr3 (274-344)||(29586340-29586410)
chr3 (274-343)||(27033655-27033724)
chr3 (274-343)||(34373835-34373904)
chr3 (274-345)||(1995448-1995519)
chr3 (274-345)||(10474438-10474509)
chr3 (274-345)||(33632827-33632897)
chr3 (274-337)||(34373593-34373656)
chr3 (274-345)||(54911658-54911729)
chr3 (274-345)||(31523668-31523739)
chr3 (286-343)||(24754673-24754730)
chr3 (286-343)||(24763670-24763727)
chr3 (274-343)||(46167397-46167466)
chr3 (275-339)||(25285843-25285907)
chr3 (274-345)||(48084823-48084895)
chr3 (274-345)||(42613084-42613155)
chr3 (278-345)||(44637950-44638017)
chr3 (274-345)||(49679270-49679341)
chr3 (274-345)||(51982585-51982656)
chr3 (277-343)||(40851781-40851847)
[»] chr6 (21 HSPs)
chr6 (274-345)||(7215852-7215923)
chr6 (274-345)||(2800611-2800682)
chr6 (274-343)||(4804452-4804521)
chr6 (274-340)||(27826542-27826608)
chr6 (274-343)||(21159371-21159440)
chr6 (274-343)||(7162088-7162157)
chr6 (274-343)||(12412641-12412710)
chr6 (274-343)||(13089751-13089820)
chr6 (274-343)||(17944166-17944235)
chr6 (274-345)||(17828568-17828639)
chr6 (274-345)||(24484883-24484954)
chr6 (274-345)||(32254031-32254102)
chr6 (274-343)||(1249150-1249217)
chr6 (274-323)||(29698167-29698216)
chr6 (274-345)||(13888522-13888594)
chr6 (274-344)||(227564-227635)
chr6 (274-345)||(2142293-2142364)
chr6 (301-339)||(9954332-9954370)
chr6 (286-340)||(23936269-23936323)
chr6 (216-248)||(7215949-7215981)
chr6 (278-345)||(7545645-7545713)
[»] chr1 (19 HSPs)
chr1 (274-345)||(39426214-39426285)
chr1 (274-343)||(12151771-12151840)
chr1 (274-345)||(5047381-5047452)
chr1 (274-345)||(26860050-26860121)
chr1 (274-340)||(32887785-32887851)
chr1 (286-343)||(7840681-7840738)
chr1 (274-339)||(26372256-26372321)
chr1 (274-343)||(50294065-50294134)
chr1 (274-343)||(50484390-50484459)
chr1 (278-345)||(24977248-24977315)
chr1 (274-345)||(30077644-30077715)
chr1 (274-345)||(32618805-32618875)
chr1 (274-336)||(24413291-24413353)
chr1 (274-343)||(48327156-48327224)
chr1 (274-345)||(18976304-18976376)
chr1 (274-345)||(52280039-52280110)
chr1 (274-331)||(12380924-12380981)
chr1 (274-331)||(12384991-12385048)
chr1 (302-339)||(35534788-35534825)
[»] chr5 (25 HSPs)
chr5 (274-345)||(29340999-29341070)
chr5 (274-343)||(4895737-4895806)
chr5 (274-343)||(35660611-35660680)
chr5 (274-343)||(14349807-14349876)
chr5 (274-343)||(18625423-18625492)
chr5 (274-343)||(32129619-32129688)
chr5 (274-343)||(37266735-37266804)
chr5 (274-343)||(11775797-11775866)
chr5 (274-343)||(40753164-40753233)
chr5 (274-345)||(31653039-31653110)
chr5 (274-343)||(13032122-13032191)
chr5 (274-343)||(34827196-34827265)
chr5 (275-343)||(43309113-43309181)
chr5 (274-345)||(2984390-2984461)
chr5 (274-341)||(10362018-10362085)
chr5 (274-345)||(36290606-36290677)
chr5 (278-339)||(14688582-14688643)
chr5 (277-345)||(27428881-27428949)
chr5 (274-345)||(3057154-3057225)
chr5 (294-345)||(18653385-18653436)
chr5 (274-345)||(31279918-31279989)
chr5 (274-337)||(43222130-43222193)
chr5 (274-328)||(4592804-4592858)
chr5 (274-343)||(39902419-39902488)
chr5 (314-346)||(11999598-11999630)
[»] chr2 (23 HSPs)
chr2 (275-345)||(30709115-30709185)
chr2 (274-343)||(13238685-13238754)
chr2 (274-339)||(28564896-28564961)
chr2 (274-343)||(35316829-35316898)
chr2 (274-345)||(4446896-4446967)
chr2 (274-345)||(15709772-15709843)
chr2 (274-345)||(19908784-19908854)
chr2 (274-345)||(8988859-8988930)
chr2 (274-345)||(21454495-21454565)
chr2 (274-345)||(35315288-35315359)
chr2 (274-345)||(36929720-36929791)
chr2 (274-345)||(38397085-38397156)
chr2 (275-345)||(34512025-34512095)
chr2 (274-343)||(23259489-23259558)
chr2 (274-345)||(374997-375068)
chr2 (274-345)||(30857678-30857749)
chr2 (274-345)||(31618767-31618838)
chr2 (206-248)||(6946245-6946287)
chr2 (278-345)||(19905889-19905956)
chr2 (274-345)||(23459846-23459917)
chr2 (276-345)||(2063359-2063429)
chr2 (274-340)||(4603114-4603180)
chr2 (275-345)||(15722239-15722309)
[»] chr8 (20 HSPs)
chr8 (274-343)||(30426671-30426740)
chr8 (274-343)||(28069723-28069792)
chr8 (274-343)||(36991360-36991429)
chr8 (274-345)||(18689495-18689566)
chr8 (274-345)||(24557181-24557252)
chr8 (274-345)||(26749548-26749619)
chr8 (274-345)||(36748492-36748562)
chr8 (274-345)||(42761717-42761788)
chr8 (274-345)||(6014198-6014270)
chr8 (274-338)||(10672519-10672583)
chr8 (274-345)||(21360280-21360351)
chr8 (291-345)||(17520403-17520457)
chr8 (278-343)||(40695249-40695314)
chr8 (274-345)||(34612568-34612639)
chr8 (274-343)||(10652619-10652688)
chr8 (274-339)||(24102020-24102085)
chr8 (274-323)||(28318924-28318973)
chr8 (274-343)||(41511266-41511335)
chr8 (274-323)||(44859189-44859238)
chr8 (274-345)||(45113274-45113346)
[»] chr7 (29 HSPs)
chr7 (274-343)||(4888471-4888540)
chr7 (274-343)||(25084730-25084799)
chr7 (274-343)||(12139330-12139400)
chr7 (274-343)||(9559056-9559125)
chr7 (274-345)||(32915960-32916031)
chr7 (274-345)||(39855813-39855884)
chr7 (274-345)||(40023256-40023327)
chr7 (274-345)||(47799900-47799971)
chr7 (274-345)||(989133-989204)
chr7 (274-345)||(7712367-7712438)
chr7 (295-345)||(29844316-29844366)
chr7 (274-343)||(7362572-7362641)
chr7 (274-343)||(21151156-21151225)
chr7 (274-343)||(45260429-45260498)
chr7 (274-345)||(33450510-33450582)
chr7 (274-345)||(47500282-47500354)
chr7 (274-345)||(8149613-8149684)
chr7 (274-345)||(24193597-24193668)
chr7 (274-337)||(29631052-29631115)
chr7 (275-345)||(7373872-7373942)
chr7 (274-343)||(16366522-16366591)
chr7 (274-337)||(30588539-30588602)
chr7 (286-345)||(46802331-46802390)
chr7 (274-343)||(18198260-18198329)
chr7 (290-343)||(44647984-44648037)
chr7 (303-343)||(18064588-18064628)
chr7 (278-345)||(19027683-19027751)
chr7 (278-345)||(20726885-20726953)
chr7 (216-248)||(47270512-47270544)
[»] chr4 (29 HSPs)
chr4 (274-343)||(19901920-19901989)
chr4 (274-343)||(5416468-5416536)
chr4 (274-343)||(5763164-5763233)
chr4 (274-343)||(56558283-56558352)
chr4 (274-345)||(56269076-56269147)
chr4 (274-345)||(56453820-56453891)
chr4 (277-343)||(23610649-23610715)
chr4 (274-343)||(3952172-3952241)
chr4 (274-343)||(24073620-24073689)
chr4 (274-339)||(34778425-34778490)
chr4 (274-345)||(23474115-23474186)
chr4 (274-345)||(48914518-48914589)
chr4 (274-340)||(18207045-18207111)
chr4 (274-339)||(30567905-30567970)
chr4 (274-345)||(1871281-1871352)
chr4 (274-345)||(5524451-5524522)
chr4 (274-345)||(36688188-36688259)
chr4 (274-345)||(42844187-42844258)
chr4 (274-345)||(50483556-50483627)
chr4 (274-340)||(13493276-13493342)
chr4 (274-340)||(33262557-33262623)
chr4 (274-343)||(33247132-33247201)
chr4 (274-310)||(46804635-46804671)
chr4 (274-345)||(1015854-1015925)
chr4 (286-345)||(36532641-36532700)
chr4 (287-345)||(47922366-47922425)
chr4 (274-312)||(12241441-12241479)
chr4 (274-343)||(12312477-12312547)
chr4 (274-340)||(38079725-38079791)
[»] scaffold0250 (1 HSPs)
scaffold0250 (274-343)||(7151-7220)
[»] scaffold0121 (1 HSPs)
scaffold0121 (274-345)||(29569-29640)
[»] scaffold0062 (2 HSPs)
scaffold0062 (274-345)||(58684-58755)
scaffold0062 (275-345)||(70796-70866)
[»] scaffold0035 (1 HSPs)
scaffold0035 (274-343)||(16399-16468)
[»] scaffold0012 (1 HSPs)
scaffold0012 (274-343)||(208067-208136)
[»] scaffold0008 (1 HSPs)
scaffold0008 (274-343)||(9203-9272)
[»] scaffold0171 (1 HSPs)
scaffold0171 (274-340)||(17311-17377)
[»] scaffold0126 (1 HSPs)
scaffold0126 (274-337)||(22450-22513)


Alignment Details
Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 34898247 - 34898023
Alignment:
Q  1 ccattcatacaataggcaaaagggatcatttacatcaaatatatttgttcttggtcaaatgcttaatccgcatgatattccttcgtttacaacgtaagat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34898247 ccattcatacaataggcaaaagggatcatttacatcaaatatatttgttcttggtcaaatgctcaatccgcatgatattccttcgtttacaacgtaagat 34898148  T
Q  101 ccagtgagtcgtcaaactcaatattatacatcttacgtctatataagggacatgttactaccaatcaagatatgttcattcattcactcaatacctccca 200  Q
     ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34898147 tcagtgagtcatcaaactcaatactatacatcttacgtctatataagggacatgttactaccaatcaagatatgttcattcattcactcaatacctccca 34898048  T
Q  201 ctcgagtcaagatcttctccatttt 225  Q
    |||||||||||||||||||||||||    
T  34898047 ctcgagtcaagatcttctccatttt 34898023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 2229987 - 2230056
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||| | ||||||| ||||||||||||| ||||||||| |||||||||||||||||||    
T  2229987 taattaatgatggtggaaaccacttagtggtaggacccatcatctattttttgtgtctatctctctccaa 2230056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 19830502 - 19830433
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||||||||||||||||||||||  ||||||||| ||||||||| |||| ||||    
T  19830502 taattaatgatggtgggacccacttaatggtaggacccaccatctattttttgtgtctatttctccccaa 19830433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 43720018 - 43719949
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||||||||| ||||||||||||  || |||||| |||||||||||||||||||    
T  43720018 taattaatgatggtgggacccacttagtggtaggacccacaatttattttttgtgtctatctctctccaa 43719949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 274 - 344
Target Start/End: Original strand, 29586340 - 29586410
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaa 344  Q
    ||||||||||| ||| |||||||||||| ||| |||  | |||||||||||||||||||||||||||||||    
T  29586340 taattaatgatggtgagacccacttaatagtaagacttactatctattttatgtgtctatctctctccaaa 29586410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 27033655 - 27033724
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||| ||||||| ||||||||||||  ||||||||  |||||||||||||||||||    
T  27033655 taattaatgatggtgggatccacttagtggtaggacccaccatctatttcttgtgtctatctctctccaa 27033724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 34373835 - 34373904
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||| | ||| ||||||||||||  ||||||||| |||||||||||||||||||    
T  34373835 taattaatgatggtgggacctaattagtggtaggacccaccatctattttttgtgtctatctctctccaa 34373904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 1995448 - 1995519
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| ||| ||| |||||| ||||||||| ||||||||||||| | ||||||||||||| |||||    
T  1995448 taattaatgatggtgagactcacttattggtaggactcattatctattttctatgtctatctctcttcaaat 1995519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 10474509 - 10474438
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||| | |||| || |||||||| |||||| |||||||||||||||||||||||| |||||| ||||    
T  10474509 taattaatgttggtggaactcacttaatagtaggatccattatctattttatgtgtctatatctctcaaaat 10474438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 33632827 - 33632897
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| |||| | ||| ||||| |||||| ||| ||||||||||||||||||||||||||||||||    
T  33632827 taattaatgat-gtggaatccatttaatagtaggatccactatctattttatgtgtctatctctctccaaat 33632897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 337
Target Start/End: Complemental strand, 34373656 - 34373593
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctct 337  Q
    ||||||||||| |||||||||||||| ||||||||||||  |||||||||  ||||||||||||    
T  34373656 taattaatgatggtgggacccacttagtggtaggacccaccatctatttttagtgtctatctct 34373593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 54911658 - 54911729
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| |||| || || |||||||||||||||| || ||||||||||| ||||||||||| |||||    
T  54911658 taattaatgatggtggaactcatttaatggtaggacccactacctattttatgtctctatctctcttcaaat 54911729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 31523739 - 31523668
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| |||||||||||||| |  |||||||||  |  |||||| |||||||||||||||||||||    
T  31523739 taattaatgatggtgggacccacttagtaataggacccaccacttattttttgtgtctatctctctccaaat 31523668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 343
Target Start/End: Original strand, 24754673 - 24754730
Alignment:
Q  286 gtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    |||||||||||||| |||||||||  |  ||||||||| |||||||||||||||||||    
T  24754673 gtgggacccacttagtggtaggacataccatctattttgtgtgtctatctctctccaa 24754730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 343
Target Start/End: Original strand, 24763670 - 24763727
Alignment:
Q  286 gtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    |||||||||||||| |||||||||  |  ||||||||| |||||||||||||||||||    
T  24763670 gtgggacccacttagtggtaggacataccatctattttgtgtgtctatctctctccaa 24763727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 46167397 - 46167466
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    |||||||| || || ||| ||||||| ||||||||||||  || |||||| |||||||||||||||||||    
T  46167397 taattaataatggtaggatccacttagtggtaggacccaccatatattttttgtgtctatctctctccaa 46167466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 25285907 - 25285843
Alignment:
Q  275 aattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctct 339  Q
    |||| ||||| ||||| | || |||||| ||||| ||| ||||||||||||||||||||||||||    
T  25285907 aattgatgatggtgggtctcatttaatgataggatccactatctattttatgtgtctatctctct 25285843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 48084823 - 48084895
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctctccaaat 345  Q
    |||||||||||  ||||||||||||| |||| |||||||  ||||||| || |||||||||||||| ||||||    
T  48084823 taattaatgatgatgggacccacttagtggttggacccaccatctattcttttgtgtctatctctccccaaat 48084895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 42613084 - 42613155
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| |||||||||||||| || |||||||||  |  |||||| | ||||||||||||| |||||    
T  42613084 taattaatgatggtgggacccacttagtgataggacccaccacttattttttttgtctatctctcttcaaat 42613155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 345
Target Start/End: Original strand, 44637950 - 44638017
Alignment:
Q  278 taatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||||| ||| ||||| ||||||| |||||  ||| |||||||||||||||| |||||||||| ||||    
T  44637950 taatgacagtaggacctacttaatagtagggtccactatctattttatgtgtttatctctctcaaaat 44638017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 49679341 - 49679270
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| |||||||||| ||| || ||||||||   |  |||||| |||||||||||||||||||||    
T  49679341 taattaatgatggtgggacccatttagtgataggacccgccacttattttttgtgtctatctctctccaaat 49679270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 51982656 - 51982585
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||||||||||  | | || ||||||||| ||| ||||| || ||||||||||| |||||||||||||||||    
T  51982656 taattaatgatgatagaactcacttaatgatagaacccactaactattttatgtatctatctctctccaaat 51982585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 343
Target Start/End: Original strand, 40851781 - 40851847
Alignment:
Q  277 ttaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    |||||||| || ||||||||||| |||| | |||||  ||||||||| ||||||||||| |||||||    
T  40851781 ttaatgatggtaggacccacttagtggttgaacccaccatctattttttgtgtctatctttctccaa 40851847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 7215923 - 7215852
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  7215923 taattaatgatagtgggacccaattagtggtaggacccactatctattttatgtgtctatctctctccaaat 7215852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 2800682 - 2800611
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||| |||||| |||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||    
T  2800682 taatcaatgatggtgggacccacttaatggtatgatccactatctattttatgtgtctatctctctccaaat 2800611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 4804452 - 4804521
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| |||||||||||||||||||    
T  4804452 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaa 4804521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 274 - 340
Target Start/End: Original strand, 27826542 - 27826608
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctc 340  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||||||||||||||||    
T  27826542 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctc 27826608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 21159440 - 21159371
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||||||||| |||||||||    
T  21159440 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatttctctccaa 21159371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 7162088 - 7162157
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||||||||| | ||||||||||  ||||||||  |||||||||||||||||||    
T  7162088 taattaatgatggtgggacccacttagtagtaggacccaccatctatttcttgtgtctatctctctccaa 7162157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 12412641 - 12412710
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||| ||||||||| ||||||||||||  ||||||||  |||||||||||||||||||    
T  12412641 taattaatgatggtggaacccacttagtggtaggacccaccatctatttcttgtgtctatctctctccaa 12412710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 13089820 - 13089751
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| ||||| |||||||| ||||||||||||  |||||| || |||||||||||||||||||    
T  13089820 taattaatgatggtggggcccacttagtggtaggacccaccatctatattttgtgtctatctctctccaa 13089751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 17944166 - 17944235
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||||| ||| |||||||||| |  ||||||||| |||||||||||||||||||    
T  17944166 taattaatgatggtgggacccatttagtggtaggacctaccatctattttttgtgtctatctctctccaa 17944235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 17828639 - 17828568
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||||| ||||  ||||| ||||||||| |||| | ||| ||||||||||||||||||||||||||||||||    
T  17828639 taattattgatgatgggatccacttaatagtagaatccactatctattttatgtgtctatctctctccaaat 17828568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 24484883 - 24484954
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| |||||||||||||| || |||||||||  |  |||||| |||||||||||||||||||||    
T  24484883 taattaatgatggtgggacccacttagtgataggacccaccacttattttttgtgtctatctctctccaaat 24484954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 32254102 - 32254031
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||||||||||| ||||||||| |||||||||  | || |||| | |||||||||| ||||||||    
T  32254102 taattaatgatagtgggactcacttaatgataggacccaccaccttttttttttgtctatctccctccaaat 32254031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 1249217 - 1249150
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||  | ||||| |||||||||||    
T  1249217 taattaatgatggtgggacccacttagtggtaggacccaccatctattt--tttgtctgtctctctccaa 1249150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 323
Target Start/End: Original strand, 29698167 - 29698216
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctatttt 323  Q
    ||||||||||| ||||||||||||||||||||||| |||  |||||||||    
T  29698167 taattaatgatggtgggacccacttaatggtaggatccaccatctatttt 29698216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 13888594 - 13888522
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctctccaaat 345  Q
    |||||||||||  ||||||||| |||||||||||| |||  ||||||| || ||||| |||||||||||||||    
T  13888594 taattaatgatgatgggacccagttaatggtaggaaccaccatctattattttgtgtatatctctctccaaat 13888522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 344
Target Start/End: Complemental strand, 227635 - 227564
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctctccaaa 344  Q
    |||| ||||||  ||||| ||||||| ||||||||||||  ||||||| || ||||||||||||||||||||    
T  227635 taatcaatgatgatgggatccacttagtggtaggacccaccatctattcttttgtgtctatctctctccaaa 227564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 2142364 - 2142293
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| |||| |||||| ||||| | |||||||  |  |||||| |||||||||||||||||||||    
T  2142364 taattaatgatggtggaacccacctaatgatgggacccaccacttattttttgtgtctatctctctccaaat 2142293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 9954370 - 9954332
Alignment:
Q  301 tggtaggacccattatctattttatgtgtctatctctct 339  Q
    |||| ||||||| ||||||||||||||||||||||||||    
T  9954370 tggtgggacccactatctattttatgtgtctatctctct 9954332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 340
Target Start/End: Original strand, 23936269 - 23936323
Alignment:
Q  286 gtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctc 340  Q
    ||||||||||||||||||||| | ||  |||| || |||||||||||||||||||    
T  23936269 gtgggacccacttaatggtagaatccgctatccatcttatgtgtctatctctctc 23936323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 248
Target Start/End: Complemental strand, 7215981 - 7215949
Alignment:
Q  216 tctccattttttcatttggagagatatagactc 248  Q
    ||||||||| |||||||||||||||||||||||    
T  7215981 tctccatttcttcatttggagagatatagactc 7215949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 345
Target Start/End: Original strand, 7545645 - 7545713
Alignment:
Q  278 taatgatagtgggacccacttaatggtaggacccattatctattttat-gtgtctatctctctccaaat 345  Q
    |||||||||||||| ||||||| || |||||||||  |  |||||| | ||||||||||||||||||||    
T  7545645 taatgatagtgggatccacttagtgataggacccaccacttattttttggtgtctatctctctccaaat 7545713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 39426214 - 39426285
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  39426214 taattaatgatagtgggacccaattagtggtaggacccactatctattttatgtgtctatctctctccaaat 39426285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 12151771 - 12151840
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||||||| |||||||||||    
T  12151771 taattaatgatggtgggacccacttagtggtaggacccacaatctattttttgtgtctttctctctccaa 12151840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 5047452 - 5047381
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| ||||||||||| || |||||||| |||||||||||||||||  || ||||||||||||||    
T  5047452 taattaatgatggtgggacccacatagtggtaggatccattatctattttatgcatcaatctctctccaaat 5047381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 26860121 - 26860050
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| |||||| ||||||| || ||||||| | |||||||||||||||||||||||||| |||||    
T  26860121 taattaatgattgtgggatccacttagtgataggacctactatctattttatgtgtctatctctcttcaaat 26860050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 274 - 340
Target Start/End: Complemental strand, 32887851 - 32887785
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctc 340  Q
    ||||||||||| |||||||||| |||||||||||| ||| ||| |||||||||||||||||| ||||    
T  32887851 taattaatgatggtgggacccatttaatggtaggatccactatttattttatgtgtctatctttctc 32887785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 343
Target Start/End: Complemental strand, 7840738 - 7840681
Alignment:
Q  286 gtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||| |||||||||||||||||| ||||||||  |||||||||||||||||||    
T  7840738 gtgggacccgcttaatggtaggacccatcatctatttcttgtgtctatctctctccaa 7840681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 274 - 339
Target Start/End: Original strand, 26372256 - 26372321
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctct 339  Q
    ||||||||| | ||||||||||||||||||||||| | ||| ||||||||| ||||||||||||||    
T  26372256 taattaatggtggtgggacccacttaatggtaggatctattgtctattttacgtgtctatctctct 26372321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 50294134 - 50294065
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| || ||| ||||||| ||||||||||||  ||||||||| |||||||||||||||||||    
T  50294134 taattaatgatggtaggatccacttagtggtaggacccaccatctattttttgtgtctatctctctccaa 50294065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 50484390 - 50484459
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||  |||||||||||||| |||| | |||||  ||||||||| |||||||||||||||||||    
T  50484390 taattaatgacggtgggacccacttagtggttgtacccaccatctattttttgtgtctatctctctccaa 50484459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 345
Target Start/End: Original strand, 24977248 - 24977315
Alignment:
Q  278 taatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||| |||| ||||||||| |||||||| |||  ||||||||| |||||||||||||||| ||||    
T  24977248 taatgattgtggaacccacttagtggtaggatccaccatctattttttgtgtctatctctctctaaat 24977315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 30077715 - 30077644
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||||||||||| |||||| || ||| |||||  |  |||||| |||||||||||||||||||||    
T  30077715 taattaatgatagtgggactcacttagtgatagaacccaccacttattttttgtgtctatctctctccaaat 30077644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 32618805 - 32618875
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| |||||||| ||||||| |||||| ||| |||||| ||||| |||| ||||||||||||||    
T  32618805 taattaatgatggtgggacctacttaatagtaggatccactatcta-tttatatgtccatctctctccaaat 32618875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 336
Target Start/End: Complemental strand, 24413353 - 24413291
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctc 336  Q
    ||||||||||| |||||||||| |||||| |||||||||  ||| ||||| ||||||||||||    
T  24413353 taattaatgatggtgggacccatttaatgataggacccaccatccattttttgtgtctatctc 24413291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 48327224 - 48327156
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||| ||||||||| ||||||||| ||  ||||||||| | |||||||||||||||||    
T  48327224 taattaatgatggtgg-acccacttagtggtaggactcaccatctattttttttgtctatctctctccaa 48327156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 18976376 - 18976304
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctctccaaat 345  Q
    |||||||||||  ||||||| |||||||||| ||| |||  ||||||| || |||||||||||||||||||||    
T  18976376 taattaatgatgatgggacctacttaatggttggatccaccatctattcttttgtgtctatctctctccaaat 18976304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 52280110 - 52280039
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| |||||| ||||||| || |||||||||  |  |||||| | |||||||||||||||||||    
T  52280110 taattaatgatggtgggatccacttagtgataggacccaccacttattttttatgtctatctctctccaaat 52280039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 331
Target Start/End: Complemental strand, 12380981 - 12380924
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtct 331  Q
    ||||||||||| ||||||| |||||| |||||| |||||  ||||||||| |||||||    
T  12380981 taattaatgatggtgggactcacttagtggtagaacccaccatctattttttgtgtct 12380924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 331
Target Start/End: Complemental strand, 12385048 - 12384991
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtct 331  Q
    ||||||||||| ||||||| |||||| |||||| |||||  ||||||||| |||||||    
T  12385048 taattaatgatggtgggactcacttagtggtagaacccaccatctattttttgtgtct 12384991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 35534825 - 35534788
Alignment:
Q  302 ggtaggacccattatctattttatgtgtctatctctct 339  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  35534825 ggtaggatccactatctattttatgtgtctatctctct 35534788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 4e-23; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 29340999 - 29341070
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| |||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||    
T  29340999 taattaatgatggtgggacccacttaatagtaggacccactatctattttctgtgtctatctctctccaaat 29341070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 4895806 - 4895737
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| |||||||||||||||||||    
T  4895806 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaa 4895737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 35660680 - 35660611
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| |||||||||||||||||||    
T  35660680 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaa 35660611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 14349807 - 14349876
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||||||| |||||||||||    
T  14349807 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctgtctctctccaa 14349876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 18625492 - 18625423
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||||||| |||||||||||    
T  18625492 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaa 18625423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 32129688 - 32129619
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||||||||| ||||||||||||  |||||||||  ||||||||||||||||||    
T  32129688 taattaatgatggtgggacccacttagtggtaggacccaccatctatttttggtgtctatctctctccaa 32129619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 37266735 - 37266804
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||||||||| ||||| ||||||  ||||||||| |||||||||||||||||||    
T  37266735 taattaatgatggtgggacccacttagtggtatgacccaccatctattttttgtgtctatctctctccaa 37266804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 11775797 - 11775866
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||  |||||||||||||| |||||||| |||  ||||||||| |||||||||||||||||||    
T  11775797 taattaatgacggtgggacccacttagtggtaggatccaccatctattttttgtgtctatctctctccaa 11775866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 40753233 - 40753164
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||||||||| ||||||||||||  || |||||| ||||||||||| |||||||    
T  40753233 taattaatgatggtgggacccacttagtggtaggacccaccatatattttttgtgtctatctttctccaa 40753164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 31653039 - 31653110
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| ||| ||| |||||||| ||||||| |  |||||||||||||||| |||||||||||||||    
T  31653039 taattaatgattgtgagactcacttaatagtaggactcgctatctattttatgtgtttatctctctccaaat 31653110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 13032122 - 13032191
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||||| ||| ||||||||| ||  ||||||||  |||||||||||||||||||    
T  13032122 taattaatgatggtgggacccatttagtggtaggactcaccatctatttcttgtgtctatctctctccaa 13032191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 34827196 - 34827265
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||| ||| |||||||||||||| |||||||| |||  ||||||||| | |||||||||||||||||    
T  34827196 taattaaagatggtgggacccacttagtggtaggatccaccatctattttttttgtctatctctctccaa 34827265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 43309113 - 43309181
Alignment:
Q  275 aattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    |||||||||| |||| ||||| ||||||||| || ||| |||||||||| | |||||||||||||||||    
T  43309113 aattaatgatggtggaacccatttaatggtaagatccactatctattttttatgtctatctctctccaa 43309181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 2984461 - 2984390
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| |||||||||| ||| || |||||  ||| |  ||||||||||||||||||||||||||||    
T  2984461 taattaatgatggtgggacccatttagtgataggattcatcacttattttatgtgtctatctctctccaaat 2984390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 341
Target Start/End: Complemental strand, 10362085 - 10362018
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctcc 341  Q
    ||||||||||  ||| ||||||||||||||||||| ||| || | ||||||||| |||||||||||||    
T  10362085 taattaatgacggtgagacccacttaatggtaggatccactaccaattttatgtctctatctctctcc 10362018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 36290606 - 36290677
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| |||||| ||||||| || |||||||||  |  |||||| |||||||||||||||||||||    
T  36290606 taattaatgatggtgggatccacttagtgataggacccaccacttattttttgtgtctatctctctccaaat 36290677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 339
Target Start/End: Original strand, 14688582 - 14688643
Alignment:
Q  278 taatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctct 339  Q
    ||||||| |||| | |||||||||||||| | ||| ||||||||||||||||| ||||||||    
T  14688582 taatgatggtggaatccacttaatggtagaatccaatatctattttatgtgtcgatctctct 14688643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 27428949 - 27428881
Alignment:
Q  277 ttaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||||||| |||| || |||||||||||||||  ||  ||||||||| ||||||||||||| |||||||    
T  27428949 ttaatgatggtggaactcacttaatggtaggattcaccatctattttttgtgtctatctctttccaaat 27428881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 3057225 - 3057154
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||||||||||  || ||| ||||||||||||||| |||  ||||||||| ||||| ||||||| |||||||    
T  3057225 taattaatgattatgtgactcacttaatggtaggatccaccatctattttttgtgtttatctctatccaaat 3057154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 294 - 345
Target Start/End: Original strand, 18653385 - 18653436
Alignment:
Q  294 cacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||||| || || |||||||||| ||||||||||||||| |||||    
T  18653385 cacttaatggtagaactcactatctattttttgtgtctatctctcttcaaat 18653436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 31279918 - 31279989
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||||||| || || |||||||| ||||| |||||||||  || ||||||||||||||| | ||||||||||    
T  31279918 taattaattatggtaggacccacataatgataggacccacaatttattttatgtgtctagcactctccaaat 31279989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 337
Target Start/End: Original strand, 43222130 - 43222193
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctct 337  Q
    ||||||||||| |||||| ||| |||||| || ||||||  ||||||||| |||||||||||||    
T  43222130 taattaatgatggtgggatccatttaatgataagacccaccatctattttttgtgtctatctct 43222193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 328
Target Start/End: Original strand, 4592804 - 4592858
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtg 328  Q
    ||||||||||| |||||||||||||| ||||| ||||||  ||||||||| ||||    
T  4592804 taattaatgatggtgggacccacttagtggtaagacccaccatctattttttgtg 4592858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 39902419 - 39902488
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||| | ||| ||| ||||||||||||  ||||||||  ||||| |||||||||||||    
T  39902419 taattaatgatggtggaatccatttagtggtaggacccaccatctatttcttgtgtttatctctctccaa 39902488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 11999630 - 11999598
Alignment:
Q  314 tatctattttatgtgtctatctctctccaaata 346  Q
    ||||||||||||||||||||||||||| |||||    
T  11999630 tatctattttatgtgtctatctctctctaaata 11999598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 2e-22; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 275 - 345
Target Start/End: Original strand, 30709115 - 30709185
Alignment:
Q  275 aattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||||||||| |||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  30709115 aattaatgatggtgggatccacttagtggtaggacccaatatctattttatgtgtctatctctctccaaat 30709185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 13238685 - 13238754
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||||||||  ||||||||||||  ||||||||| |||||||||||||||||||    
T  13238685 taattaatgatggtgggacccacttggtggtaggacccaccatctattttttgtgtctatctctctccaa 13238754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 339
Target Start/End: Original strand, 28564896 - 28564961
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctct 339  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| |||||||||||||||    
T  28564896 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctct 28564961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 35316829 - 35316898
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||||||||| |||||||| |||  ||||||||| |||||||||||||||||||    
T  35316829 taattaatgatggtgggacccacttagtggtaggatccaccatctattttttgtgtctatctctctccaa 35316898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 4446967 - 4446896
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||||||||||||||  ||||| ||| |||||||| ||| |||||||||||||||||||||||||| |||||    
T  4446967 taattaatgatagtgaaacccaattagtggtaggatccactatctattttatgtgtctatctctcttcaaat 4446896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 15709772 - 15709843
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||||||||||  ||| |||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||    
T  15709772 taattaatgatgatggaacccacttaatggtaggatccactatctattttatatgtttatctctctccaaat 15709843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 19908784 - 19908854
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| |||||||||||||||  ||||||| || ||||||||||||||||||||||| ||||||||    
T  19908784 taattaatgatggtgggacccacttaaaagtaggactcactatctattttatgtgtctatctc-ctccaaat 19908854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 8988859 - 8988930
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| |||||||||||||| || ||||||| || |  |||||| |||||||||||||||||||||    
T  8988859 taattaatgatggtgggacccacttagtgataggacctatcacttattttttgtgtctatctctctccaaat 8988930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 21454565 - 21454495
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| |||| ||||||||||||||| ||||||  ||||||||| |||||||||||||||| ||||    
T  21454565 taattaatgatggtggaacccacttaatggtatgacccacaatctatttt-tgtgtctatctctctctaaat 21454495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 35315359 - 35315288
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||||||| || ||||||| || ||||| ||| || |||||||||||||||||||||||||||||| |||||    
T  35315359 taattaataatggtgggactcaattaatagtaagatccattatctattttatgtgtctatctctcttcaaat 35315288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 36929720 - 36929791
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| | || | ||| ||||||||||||| || || |||||||||||||||||||||||||||||    
T  36929720 taattaatgatggcggaatccatttaatggtaggacacactacctattttatgtgtctatctctctccaaat 36929791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 38397085 - 38397156
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||||| |||| ||||||| |||||||| |||| ||||| |||||||||||| ||||||||||||| |||||    
T  38397085 taattattgatggtgggactcacttaatagtagcacccactatctattttatttgtctatctctcttcaaat 38397156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 345
Target Start/End: Complemental strand, 34512095 - 34512025
Alignment:
Q  275 aattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||||||||| ||| |||| ||||||| |||  ||||| |||||||||||||||||||||| |||||||||    
T  34512095 aattaatgattgtgagacctacttaatagtataacccactatctattttatgtgtctatctttctccaaat 34512025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 23259558 - 23259489
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||| ||||||| | ||||||||||  | ||||||| |||||||||||||||||||    
T  23259558 taattaatgatggtgggatccacttagtagtaggacccaccagctattttttgtgtctatctctctccaa 23259489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 374997 - 375068
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| |||||||||||||| |  |||||||||  |  |||||| |||||||||||||||||||||    
T  374997 taattaatgatggtgggacccacttagtaataggacccaccacttattttttgtgtctatctctctccaaat 375068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 30857749 - 30857678
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| ||| || ||| ||||| |||||| |||||||||||||| |||||||| |||||| |||||    
T  30857749 taattaatgatggtgtgatccatttaatagtaggatccattatctattttttgtgtctacctctcttcaaat 30857678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 31618838 - 31618767
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| ||||||| ||||||||| || ||| || |||||||||||| | ||||||| |||||||||    
T  31618838 taattaatgattgtgggactcacttaatgatatgactcactatctattttatatatctatctttctccaaat 31618767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 6946245 - 6946287
Alignment:
Q  206 gtcaagatcttctccattttttcatttggagagatatagactc 248  Q
    ||||||||||||| |||||||| ||||||||||||||||||||    
T  6946245 gtcaagatcttcttcattttttaatttggagagatatagactc 6946287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 345
Target Start/End: Original strand, 19905889 - 19905956
Alignment:
Q  278 taatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||| ||||||| ||||||||  || | ||||  |||||||||||||||||||||||||| ||||    
T  19905889 taatgatggtgggactcacttaataatatgtcccaccatctattttatgtgtctatctctctcaaaat 19905956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 23459917 - 23459846
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| |||||||||| ||| || ||||||||   |  |||||| |||||||||||||||||||||    
T  23459917 taattaatgatggtgggacccatttagtgataggacccgccacttattttttgtgtctatctctctccaaat 23459846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 2063359 - 2063429
Alignment:
Q  276 attaatgatagtgggacccacttaatggtaggacccatt-atctattttatgtgtctatctctctccaaat 345  Q
    ||||||||| |||| ||||||||  |||||||||| |   ||||||||| |||||||||||||||||||||    
T  2063359 attaatgatggtggaacccacttggtggtaggaccaaaccatctattttttgtgtctatctctctccaaat 2063429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 340
Target Start/End: Complemental strand, 4603180 - 4603114
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctc 340  Q
    ||||||||||| ||||||||||  ||||||||| || |||||| |||| | | ||||||||||||||    
T  4603180 taattaatgatggtgggacccatctaatggtagaactcattatatattgtctatgtctatctctctc 4603114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 345
Target Start/End: Original strand, 15722239 - 15722309
Alignment:
Q  275 aattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||||||||| |||| ||||| ||||||||||||   | |||||||||||| ||| ||||||| |||||||    
T  15722239 aattaatgatggtggaacccatttaatggtaggataaactatctattttatatgtttatctctttccaaat 15722309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 30426740 - 30426671
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| |||||||||||||||||||    
T  30426740 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaa 30426671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 28069723 - 28069792
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||||||| |||||||||||    
T  28069723 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaa 28069792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 36991360 - 36991429
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||||||||| ||||||||||||| ||||||||  | |||||||||||||||||    
T  36991360 taattaatgatggtgggacccacttagtggtaggacccatcatctatttcttatgtctatctctctccaa 36991429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 18689495 - 18689566
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||||||||||  ||| |||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||    
T  18689495 taattaatgatgatggaacccacttaatggtaggatccactatctattttatatgtttatctctctccaaat 18689566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 24557252 - 24557181
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||||||||||  |||||| |||||||||||||||||||||| ||||||||||| | ||||||| |||||||    
T  24557252 taattaatgatgatgggactcacttaatggtaggacccattacctattttatgtctatatctctttccaaat 24557181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 26749619 - 26749548
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| |||||||||||||| || |||||||||| |  |||||| |||||||||||||||||||||    
T  26749619 taattaatgatggtgggacccacttagtgataggacccatcacttattttttgtgtctatctctctccaaat 26749548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 36748562 - 36748492
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| |||||| |||||||||||||||||||  | |||||||| ||||||||||| |||||||||    
T  36748562 taattaatgatggtgggatccacttaatggtaggacccgctgtctatttt-tgtgtctatctatctccaaat 36748492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 42761717 - 42761788
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||||||||||  ||| ||||||| | |||||||| ||| |||||||||||||||||||||||||| |||||    
T  42761717 taattaatgatgatggaacccactgagtggtaggatccactatctattttatgtgtctatctctcttcaaat 42761788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 6014198 - 6014270
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctctccaaat 345  Q
    |||||||||||| | ||| |||||||||||||||||| || ||||||| || ||||||||||| |||||||||    
T  6014198 taattaatgataataggatccacttaatggtaggacctatcatctattcttttgtgtctatctttctccaaat 6014270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 274 - 338
Target Start/End: Complemental strand, 10672583 - 10672519
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctc 338  Q
    ||||||||||| ||||||| |||||| |||||||| |||  ||||||||| ||||||||||||||    
T  10672583 taattaatgatggtgggactcacttagtggtaggatccaccatctattttttgtgtctatctctc 10672519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 21360280 - 21360351
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||||||| || |||||  ||||||||||||| || | ||||||||| |||||||| |||||||||||||||    
T  21360280 taattaataatggtggggtccacttaatggtatgatctattatctatattatgtgtttatctctctccaaat 21360351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 345
Target Start/End: Original strand, 17520403 - 17520457
Alignment:
Q  291 acccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| ||||||| |  |||||||||||||||||||| |||||||||||    
T  17520403 acccacttaatagtaggactcgctatctattttatgtgtctatatctctccaaat 17520457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 343
Target Start/End: Complemental strand, 40695314 - 40695249
Alignment:
Q  278 taatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||| |||| || |||||| |||||||||| |  ||||||||| |||||||||||||||||||    
T  40695314 taatgatggtggaactcacttagtggtaggacctaccatctattttttgtgtctatctctctccaa 40695249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 34612568 - 34612639
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| ||| |||||||||| || |||||||||  |  |||||| |||||||||||||||| ||||    
T  34612568 taattaatgatggtgagacccacttagtgataggacccaccacttattttttgtgtctatctctctctaaat 34612639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 10652688 - 10652619
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||||| ||| | ||| ||||||  ||| ||||| ||| |||||||||||||||    
T  10652688 taattaatgatggtgggacccaattagtagtatgacccaccatcaattttttgtatctatctctctccaa 10652619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 339
Target Start/End: Original strand, 24102020 - 24102085
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctct 339  Q
    ||||||||||| |||| || |||||| |||||||| |||  ||||||||| | |||||||||||||    
T  24102020 taattaatgatggtggaactcacttagtggtaggatccaccatctattttttatgtctatctctct 24102085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 323
Target Start/End: Complemental strand, 28318973 - 28318924
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctatttt 323  Q
    ||||||||||| || ||||||||||| |||||||||||| ||||| ||||    
T  28318973 taattaatgatggttggacccacttagtggtaggacccactatctttttt 28318924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 41511266 - 41511335
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||| | ||||||| || ||||||||| |||||||||| | | ||||||||| |||||    
T  41511266 taattaatgatggtggaaaccacttagtgataggacccactatctattttttatatctatctctttccaa 41511335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 323
Target Start/End: Complemental strand, 44859238 - 44859189
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctatttt 323  Q
    ||||||||||| |||||||||||||| |||||| |||||  |||||||||    
T  44859238 taattaatgatggtgggacccacttagtggtagaacccaccatctatttt 44859189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 45113274 - 45113346
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctctccaaat 345  Q
    |||||||||||  |||||| |||||| |||| |||||||  ||||||| || ||||||||| |||||||||||    
T  45113274 taattaatgatgatgggacacacttagtggttggacccaccatctattcttttgtgtctatgtctctccaaat 45113346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 4888471 - 4888540
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||| ||||| |||||||||||| |||||||||| |||||||||||||||||||    
T  4888471 taattaatgatggtgggacctacttagtggtaggacccactatctattttttgtgtctatctctctccaa 4888540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 25084799 - 25084730
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| |||||||||||||||||||    
T  25084799 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaa 25084730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 12139330 - 12139400
Alignment:
Q  274 taattaatgatagtgggaccc-acttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| ||||||||| ||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  12139330 taattaatgatggtgggaccccacttaatggtaggacccaccatctattttttgtgtctatctctctccaa 12139400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 9559125 - 9559056
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||| |||||||||||||||    
T  9559125 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtatctatctctctccaa 9559056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 32915960 - 32916031
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||| ||||| ||||||| ||||||||||||||||||| ||| |||||| ||||||||||||||| |||||    
T  32915960 taattcatgatggtgggactcacttaatggtaggacccactatttattttttgtgtctatctctcttcaaat 32916031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 39855884 - 39855813
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||||||||||  ||||||||||||| |||||||||| |  |||| ||||||||||||||||||||||||||    
T  39855884 taattaatgatgatgggacccacttagtggtaggaccgaccatcttttttatgtgtctatctctctccaaat 39855813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 40023327 - 40023256
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||| | |||||||||||||||||||| || |||||| ||||||||| ||||||||| |||||||||    
T  40023327 taattaatggtggtgggacccacttaatggtaagatccattaactattttatatgtctatctttctccaaat 40023256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 47799971 - 47799900
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| |||||||||||||| || |||||||||| |  |||||| |||||||||||||||||||||    
T  47799971 taattaatgatggtgggacccacttagtgataggacccatcacttattttttgtgtctatctctctccaaat 47799900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 989133 - 989204
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||||||| || || ||||| ||||| |||||||||||| ||| |||||| |||||||||||||||||||||    
T  989133 taattaattatggttggacctacttagtggtaggacccactatatattttttgtgtctatctctctccaaat 989204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 7712438 - 7712367
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||| ||| |||| ||||||||||||||||||| || ||||||| |||||| |||||||||||| ||||    
T  7712438 taattaaagatggtggcacccacttaatggtaggactcactatctatcttatgtctctatctctctctaaat 7712367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 29844316 - 29844366
Alignment:
Q  295 acttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||| |||||| ||||| ||||||||||||||||||||||||||||||||    
T  29844316 acttagtggtagaacccactatctattttatgtgtctatctctctccaaat 29844366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 7362572 - 7362641
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||| ||||| ||| ||||| ||||||  ||||||||| |||||||||||||||||||    
T  7362572 taattaatgatggtggaacccatttagtggtacgacccaccatctattttttgtgtctatctctctccaa 7362641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 21151156 - 21151225
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||||||||| |||||||| ||   ||||||||  |||||||||||||||||||    
T  21151156 taattaatgatggtgggacccacttagtggtaggatcctccatctatttcttgtgtctatctctctccaa 21151225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 45260498 - 45260429
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    |||||||||||  ||||| ||||||| |||||||| |||  ||||||||| |||||||||||||||||||    
T  45260498 taattaatgatgatgggatccacttagtggtaggatccacaatctattttttgtgtctatctctctccaa 45260429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 33450510 - 33450582
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctctccaaat 345  Q
    |||||||||||  ||||||||||||| |||| |||||||  ||||||| || |||||||||||||||||||||    
T  33450510 taattaatgatgatgggacccacttagtggttggacccaccatctattcttttgtgtctatctctctccaaat 33450582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 47500354 - 47500282
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctctccaaat 345  Q
    |||||||||||  ||||||||||||| |||| |||||||  ||||||| || |||||||||||||||||||||    
T  47500354 taattaatgatgatgggacccacttagtggttggacccaccatctattcttttgtgtctatctctctccaaat 47500282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 8149613 - 8149684
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| ||||||||||||||||| || |||||| ||  ||||||| || ||||||||||| |||||    
T  8149613 taattaatgatggtgggacccacttaatgatatgacccactacttattttacgtctctatctctcttcaaat 8149684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 24193597 - 24193668
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||||| ||||  ||||| ||| ||||||||| ||| |||| |||||||||||||||||||||||| |||||    
T  24193597 taattactgatgatgggatccatttaatggtaagactcattgtctattttatgtgtctatctctcttcaaat 24193668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 337
Target Start/End: Original strand, 29631052 - 29631115
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctct 337  Q
    |||||||||||||||||||| || || |||| ||||||| ||||||| || |||||||||||||    
T  29631052 taattaatgatagtgggacctacatagtggttggacccactatctatgttttgtgtctatctct 29631115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 345
Target Start/End: Original strand, 7373872 - 7373942
Alignment:
Q  275 aattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||||||||| | ||||||| ||| |||||| | |||||||| |||  ||||||||||||||||    
T  7373872 aattaatgatagtgggatctacttaatagtaagacccactgtctattttttgtacctatctctctccaaat 7373942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 16366522 - 16366591
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| ||||||| |||||| |||||||| |||  ||||||||  | |||||||||||||||||    
T  16366522 taattaatgatggtgggacacacttagtggtaggatccaccatctatttcttatgtctatctctctccaa 16366591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 337
Target Start/End: Original strand, 30588539 - 30588602
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctct 337  Q
    ||||||||||| |||||||||||||| || |||||||| | |  |||||| |||||||||||||    
T  30588539 taattaatgatggtgggacccacttagtgataggacccgtcacttattttttgtgtctatctct 30588602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 46802390 - 46802331
Alignment:
Q  286 gtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||||||||||||| ||||||||||||   |||||||| | |||||||||||||| ||||    
T  46802390 gtgggacccacttagtggtaggacccaccgtctattttttatgtctatctctctctaaat 46802331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 18198260 - 18198329
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| ||||||| |||||| ||| || |||||  ||||||||| ||||||||| | |||||||    
T  18198260 taattaatgatggtgggactcacttagtggcagaacccaccatctattttttgtgtctatttatctccaa 18198329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 343
Target Start/End: Original strand, 44647984 - 44648037
Alignment:
Q  290 gacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    |||||||||| |||| ||| |||  ||||||||| |||||||||||||||||||    
T  44647984 gacccacttagtggtcggatccaccatctattttttgtgtctatctctctccaa 44648037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 343
Target Start/End: Original strand, 18064588 - 18064628
Alignment:
Q  303 gtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||| || | ||||||||||||||||||||||||||||    
T  18064588 gtaggactcactgtctattttatgtgtctatctctctccaa 18064628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 345
Target Start/End: Complemental strand, 19027751 - 19027683
Alignment:
Q  278 taatgatagtgggacccacttaatggtaggacccattatctattttat-gtgtctatctctctccaaat 345  Q
    ||||||| |||||| ||||||| || |||||||||  || |||||| | ||||||||||||||||||||    
T  19027751 taatgatggtgggatccacttagtgataggacccaccatttatttttttgtgtctatctctctccaaat 19027683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 345
Target Start/End: Original strand, 20726885 - 20726953
Alignment:
Q  278 taatgatagtgggacccacttaatggtaggacccattatctattttat-gtgtctatctctctccaaat 345  Q
    ||||||| |||||| ||||||| || |||||||||  || |||||| | ||||||||||||||||||||    
T  20726885 taatgatggtgggatccacttagtgataggacccaccatttatttttttgtgtctatctctctccaaat 20726953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 248
Target Start/End: Original strand, 47270512 - 47270544
Alignment:
Q  216 tctccattttttcatttggagagatatagactc 248  Q
    ||||||||| |||||||||||||||||||||||    
T  47270512 tctccatttcttcatttggagagatatagactc 47270544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 19901989 - 19901920
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| |||||||||||||||||||    
T  19901989 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaa 19901920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 5416536 - 5416468
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| |||||||||||||||||||    
T  5416536 taattaatgatggtgggacccacttagtggtaggacccacaatctatttt-tgtgtctatctctctccaa 5416468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 5763233 - 5763164
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||||||||| ||| |||||||||||||||    
T  5763233 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtttctatctctctccaa 5763164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 56558283 - 56558352
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||||||||||||| || |||||||||  ||||||||| |||||||||||||||||||    
T  56558283 taattaatgatggtgggacccacttagtgataggacccaccatctattttttgtgtctatctctctccaa 56558352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 56269147 - 56269076
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| |||||||||||||| ||||||||||||  |  |||||| |||||||||||||||||||||    
T  56269147 taattaatgatggtgggacccacttagtggtaggacccaccacttattttttgtgtctatctctctccaaat 56269076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 56453891 - 56453820
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||| |||||| ||||||||||||||||| |||||||||  | ||||||| |||||||||||||||||||||    
T  56453891 taatgaatgatggtgggacccacttaatgataggacccaccacctattttttgtgtctatctctctccaaat 56453820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 277 - 343
Target Start/End: Original strand, 23610649 - 23610715
Alignment:
Q  277 ttaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    |||||||| |||||||||||||| ||||| ||||||  ||||||||| |||||||||||||||||||    
T  23610649 ttaatgatggtgggacccacttagtggtatgacccaccatctattttttgtgtctatctctctccaa 23610715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 3952241 - 3952172
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| ||| |||||||||| ||||||||||||  ||||||||| | |||||||||||||||||    
T  3952241 taattaatgatggtgagacccacttagtggtaggacccaccatctattttttttgtctatctctctccaa 3952172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 24073620 - 24073689
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| | |||||||||||| ||||||||||||  ||||||||  |||||||||||||||||||    
T  24073620 taattaatgatggcgggacccacttagtggtaggacccaccatctatttgttgtgtctatctctctccaa 24073689  T

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Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 274 - 339
Target Start/End: Original strand, 34778425 - 34778490
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctct 339  Q
    ||||||||||| |||||||||||||| |||||||| |||  ||||||||| |||||||||||||||    
T  34778425 taattaatgatggtgggacccacttagtggtaggatccaccatctattttttgtgtctatctctct 34778490  T

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Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 23474115 - 23474186
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| ||||||  |||| ||| ||||||||||  |||||||||||||||||||||||| ||||||    
T  23474115 taattaatgatggtgggattcactcaatagtaggacccaccatctattttatgtgtctatctctccccaaat 23474186  T

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Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 48914589 - 48914518
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||||| || |||||||| ||| |||||||||  |||||||||||||||| ||||||||| ||||    
T  48914589 taattaatgatagcggaacccactttatgataggacccacaatctattttatgtgtcgatctctctctaaat 48914518  T

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Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 274 - 340
Target Start/End: Complemental strand, 18207111 - 18207045
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctc 340  Q
    |||||||||||  ||||||||||||| ||||||||||||  ||||||||| | ||||||||||||||    
T  18207111 taattaatgatgatgggacccacttagtggtaggacccaccatctattttttttgtctatctctctc 18207045  T

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Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 339
Target Start/End: Original strand, 30567905 - 30567970
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctct 339  Q
    |||||||||||  ||| ||||||||| ||||||||||||  ||||||||| |||||||||||||||    
T  30567905 taattaatgatgatggaacccacttagtggtaggacccaccatctattttttgtgtctatctctct 30567970  T

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Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 1871281 - 1871352
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||||||||||  ||||||||||||| | |||||| ||| ||||||| || | |||||||||||||||||||    
T  1871281 taattaatgatgatgggacccacttagtagtaggatccactatctatattttttgtctatctctctccaaat 1871352  T

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Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 5524451 - 5524522
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| |||||||||||||| || |||||||||  |  |||||| | |||||||||||||||||||    
T  5524451 taattaatgatggtgggacccacttactgataggacccaccacttattttttatgtctatctctctccaaat 5524522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 36688259 - 36688188
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| |||||||||||||| || |||||| ||  |  |||||| |||||||||||||||||||||    
T  36688259 taattaatgatggtgggacccacttagtgataggactcaacacttattttttgtgtctatctctctccaaat 36688188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 42844258 - 42844187
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| | |||| ||| ||||| ||||||| || | |||||||||||||||||||| |||||||||    
T  42844258 taattaatgatggagggatccatttaatagtaggacacactctctattttatgtgtctatctatctccaaat 42844187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 50483627 - 50483556
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||||||||||| || ||| ||||||||||| ||| | | ||||||||||| |||||||||| |||||||||    
T  50483627 taattaatgataatgtgactcacttaatggtgggatcgaatatctattttacgtgtctatctgtctccaaat 50483556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 340
Target Start/End: Original strand, 13493276 - 13493342
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctc 340  Q
    ||||||||||||  ||||| |||||| |||| ||| ||| ||||||||||| |||||||||||||||    
T  13493276 taattaatgataaagggactcacttagtggtgggatccactatctattttacgtgtctatctctctc 13493342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 340
Target Start/End: Complemental strand, 33262623 - 33262557
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctc 340  Q
    ||||||||||| |||||||| | ||| |||||||| |||  ||||||||| ||||||||||||||||    
T  33262623 taattaatgatggtgggacctatttagtggtaggatccaccatctattttttgtgtctatctctctc 33262557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 33247201 - 33247132
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||| ||||| ||| |||||| |||||  ||||||||  |||||||||||||||||||    
T  33247201 taattaatgatggtggaacccatttagtggtagaacccaccatctatttcttgtgtctatctctctccaa 33247132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 310
Target Start/End: Original strand, 46804635 - 46804671
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacc 310  Q
    |||||||||||||| ||||||||||||||||||||||    
T  46804635 taattaatgatagttggacccacttaatggtaggacc 46804671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 1015925 - 1015854
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||| ||||||||||| ||||| | |||||||  |  |||||| |||||||||||||||| ||||    
T  1015925 taattaatgatggtgggacccacctaatgatgggacccaccacttattttttgtgtctatctctctctaaat 1015854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 345
Target Start/End: Original strand, 36532641 - 36532700
Alignment:
Q  286 gtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||| ||||||| |||| ||||| ||| ||| ||||||||||||||||||||||| ||||    
T  36532641 gtggaacccactgaatgataggatccactatttattttatgtgtctatctctctctaaat 36532700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 47922425 - 47922366
Alignment:
Q  287 tgggacccacttaatggtaggacccattatctatt-ttatgtgtctatctctctccaaat 345  Q
    ||||||||||||| ||||||||||||  ||||||| || ||||||||| |||||||||||    
T  47922425 tgggacccacttagtggtaggacccaccatctattcttttgtgtctatatctctccaaat 47922366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Complemental strand, 12241479 - 12241441
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggaccca 312  Q
    ||||||||||| |||||||||||||| ||||||||||||    
T  12241479 taattaatgatggtgggacccacttagtggtaggaccca 12241441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 12312547 - 12312477
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatcta-ttttatgtgtctatctctctccaa 343  Q
    |||||||||||  ||||||||||||| |||||||| |||  ||||| |||| | |||||||||||||||||    
T  12312547 taattaatgatgatgggacccacttagtggtaggatccaccatctatttttttttgtctatctctctccaa 12312477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 340
Target Start/End: Complemental strand, 38079791 - 38079725
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctc 340  Q
    ||||||||||| |||| | ||||||| | ||||||||||  ||||||||  ||||||||||||||||    
T  38079791 taattaatgatggtggaatccacttagtagtaggacccaccatctatttcttgtgtctatctctctc 38079725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 7151 - 7220
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||| ||||||||||| ||||||||||  ||||||||| |||||||||||||||||||    
T  7151 taattaatgatggtggaacccacttaatagtaggacccaccatctattttttgtgtctatctctctccaa 7220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 29640 - 29569
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    ||||||||||||||||||| ||| ||||| ||||||| |||| ||||||||||| |||||||||||| ||||    
T  29640 taattaatgatagtgggactcacgtaatgctaggacctattacctattttatgtctctatctctctctaaat 29569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 58684 - 58755
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||||||||||  ||| |||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||    
T  58684 taattaatgatgatggaacccacttaatggtaggatccactatctattttatatgtttatctctctccaaat 58755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 345
Target Start/End: Original strand, 70796 - 70866
Alignment:
Q  275 aattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaaat 345  Q
    |||||||||| |||| ||||| ||||||||||||   | |||||||||||| ||| ||||||| |||||||    
T  70796 aattaatgatggtggaacccatttaatggtaggataaactatctattttatatgtttatctctttccaaat 70866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 16468 - 16399
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    |||||||||||  ||||||||||||| ||||||||||||  || |||||| |||||||||||||||||||    
T  16468 taattaatgatgatgggacccacttagtggtaggacccaccatttattttttgtgtctatctctctccaa 16399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 208067 - 208136
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    |||||||||||  ||||||||||||| ||||||||||||  ||||||||| ||||| |||||||||||||    
T  208067 taattaatgatgatgggacccacttagtggtaggacccaccatctattttttgtgtttatctctctccaa 208136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 9272 - 9203
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctccaa 343  Q
    ||||||||||| |||| | ||||||| |||| |||||||  ||||||||| |||||||||||||||||||    
T  9272 taattaatgatggtggaatccacttagtggttggacccaccatctattttctgtgtctatctctctccaa 9203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 340
Target Start/End: Complemental strand, 17377 - 17311
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctctctc 340  Q
    ||||||||||| |||||||||||||| || |||||||||  |  |||||| ||||||||||||||||    
T  17377 taattaatgatggtgggacccacttagtgataggacccagcacttattttttgtgtctatctctctc 17311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 337
Target Start/End: Complemental strand, 22513 - 22450
Alignment:
Q  274 taattaatgatagtgggacccacttaatggtaggacccattatctattttatgtgtctatctct 337  Q
    |||||||| || |||| || |||||| |||||||| ||| |||||||||| |||||||||||||    
T  22513 taattaattattgtggaactcacttagtggtaggatccactatctattttttgtgtctatctct 22450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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