View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18355_low_29 (Length: 223)
Name: NF18355_low_29
Description: NF18355
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18355_low_29 |
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Alignment Details
Target: chr3 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 9 - 173
Target Start/End: Original strand, 29747259 - 29747423
Alignment:
| Q |
9 |
agatgaagtgatgaatatggtatacgatggagagcgcaagattgaagcagtccaacaaagtaagtgattcacacactttcgattagtttataaagagcta |
108 |
Q |
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| T |
29747259 |
agatgaagtgatgaatatggtatacgatggagagcgcaagattgaagcagtccaacaaagtaagtgattcacacactttcgattagtttataaagagcta |
29747358 |
T |
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| Q |
109 |
ggaaagaagaaaacaaaccctaaaaagatacaaattgtgatagtgatacaccaacatccataatt |
173 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29747359 |
ggaaagaagaaaacaaaccctaaaaagatacaaattgtgatagtgatacaccaacatccataatt |
29747423 |
T |
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