View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18356_high_6 (Length: 414)
Name: NF18356_high_6
Description: NF18356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18356_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 341; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 15 - 401
Target Start/End: Original strand, 41129798 - 41130181
Alignment:
| Q |
15 |
aacccaatctctactatccataaacaacaaccgattactggtaattacaagatatagatattagataatgtcaattttcaacatcagattattacttcaa |
114 |
Q |
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| T |
41129798 |
aacccaatatccactatccataaacaacaaccgattactggtaattacgagatatagatattagataatgtcaattttcaacatcagattattacttcaa |
41129897 |
T |
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| Q |
115 |
taagctaaagaagaattatacactattcgtactagcagattagatgtgaacattattttattttgaagggtactagatgtaaacttatcaccattcacta |
214 |
Q |
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| T |
41129898 |
taagctaaagaagagttatacactattcgtactag---attagatgtgaacattgttttattttgaagggtactagatgtaaagttatcaccattcacca |
41129994 |
T |
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| Q |
215 |
caaaatttacatgtgaatatatttggaatgtaaaagtcactcctaaattttcttcattacccgcaatttcaaggaggcactgtactctccatcgtatctc |
314 |
Q |
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| T |
41129995 |
caaaatttacatgtgaatatatttggaatgtaaaagtcactcctaaattttcttcattacccgcaatttcaaggaggcactgtactctccatcgtatctc |
41130094 |
T |
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| Q |
315 |
accattccagtactccagagattgattaacccctgcaaaactaaaagaccaaaataatttaatatttgagtttctattcaactaatt |
401 |
Q |
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| T |
41130095 |
accattccagtactccagagattgattaacccctgcaaaaataaaagaccaaaataatttaatatttgagtttctattcaactaatt |
41130181 |
T |
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