View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18359_low_15 (Length: 384)
Name: NF18359_low_15
Description: NF18359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18359_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 336; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 16 - 367
Target Start/End: Original strand, 33885117 - 33885468
Alignment:
| Q |
16 |
atggattaacaattgtattagagtgttcaactcaataatatgttacaatgttttcctcatctttgatcttcttgatgctgttttatgtgttatctataga |
115 |
Q |
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| T |
33885117 |
atggattaacaattgtattagagtgttcaactcaataatatgttacattgttttcctcatctttgatcttcttgatgctgttttatgtgttatctataga |
33885216 |
T |
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| Q |
116 |
taccttgatgaacgcattgatggggtggcctcttcttgttgttgctctaaatgggagatacagaagaagatggtgatgaatgatgaagatgatggtgttt |
215 |
Q |
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| T |
33885217 |
taccttgatgaacgcattgatggggtggcctcttcttgttgttgctctaaatgggagagacagaagaagatggtgatgaatgatgaagatgatggtgttt |
33885316 |
T |
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| Q |
216 |
cagaaagtttgtatgagaggaagaacatgtttagagaaataggtttgcttcaatttggtagaaaaagggaggaagaagattctaatggaaaatgtggtgg |
315 |
Q |
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| T |
33885317 |
cagaaagtttgtatgagaggaagaacatgtttagagaaataggtttgcttcaatttggtggaaaaagggaggaagaagattcttatggaaaatgtggtgg |
33885416 |
T |
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| Q |
316 |
aaggatagtgaaaagttggtctgattgtggatgtgagtcttgtctttcatgg |
367 |
Q |
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| T |
33885417 |
aaggatagtgaaaagttggtctgattgtggatgtgagtcttgtctttcatgg |
33885468 |
T |
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