View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18360_low_5 (Length: 507)

Name: NF18360_low_5
Description: NF18360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18360_low_5
NF18360_low_5
[»] chr8 (43 HSPs)
chr8 (15-490)||(17751661-17752136)
chr8 (15-490)||(17760648-17761123)
chr8 (129-359)||(17737641-17737872)
chr8 (133-363)||(15734182-15734413)
chr8 (57-129)||(29510233-29510304)
chr8 (64-129)||(4673354-4673418)
chr8 (84-129)||(15816058-15816103)
chr8 (84-129)||(22652061-22652106)
chr8 (57-125)||(5813640-5813707)
chr8 (56-128)||(24205749-24205820)
chr8 (57-129)||(36450694-36450765)
chr8 (55-129)||(949205-949278)
chr8 (63-129)||(39820482-39820547)
chr8 (84-129)||(8343041-8343086)
chr8 (84-129)||(8343401-8343446)
chr8 (84-129)||(22197671-22197716)
chr8 (92-129)||(26902104-26902141)
chr8 (84-129)||(29447529-29447574)
chr8 (85-129)||(13436910-13436954)
chr8 (87-127)||(16987990-16988030)
chr8 (378-426)||(17737876-17737924)
chr8 (63-127)||(44067580-44067644)
chr8 (87-130)||(16641908-16641951)
chr8 (90-129)||(25566910-25566949)
chr8 (86-129)||(27213601-27213644)
chr8 (94-129)||(31514938-31514973)
chr8 (57-132)||(34450958-34451032)
chr8 (91-129)||(4298830-4298867)
chr8 (84-130)||(11803344-11803390)
chr8 (87-129)||(21465500-21465542)
chr8 (86-128)||(29447040-29447082)
chr8 (86-124)||(31109463-31109501)
chr8 (89-135)||(37283749-37283795)
chr8 (84-129)||(11944750-11944795)
chr8 (84-129)||(12570438-12570483)
chr8 (84-129)||(12570664-12570709)
chr8 (84-129)||(13397625-13397670)
chr8 (84-129)||(18407793-18407838)
chr8 (84-117)||(22943301-22943334)
chr8 (84-129)||(30067968-30068013)
chr8 (56-129)||(38487157-38487230)
chr8 (84-129)||(40064036-40064081)
chr8 (21-53)||(39954314-39954346)
[»] chr4 (54 HSPs)
chr4 (57-129)||(53381530-53381602)
chr4 (57-129)||(24343560-24343632)
chr4 (57-131)||(23292924-23292997)
chr4 (63-129)||(18513175-18513241)
chr4 (56-129)||(7012124-7012197)
chr4 (84-129)||(11596297-11596342)
chr4 (57-130)||(28964187-28964259)
chr4 (84-129)||(715545-715590)
chr4 (84-129)||(752871-752916)
chr4 (57-129)||(944602-944674)
chr4 (84-124)||(3712458-3712498)
chr4 (57-129)||(12895214-12895285)
chr4 (57-129)||(34306744-34306815)
chr4 (90-129)||(5775304-5775343)
chr4 (84-131)||(8423656-8423703)
chr4 (85-128)||(14465006-14465049)
chr4 (86-129)||(36635406-36635449)
chr4 (86-129)||(40784029-40784072)
chr4 (84-126)||(28084598-28084640)
chr4 (84-129)||(18966583-18966628)
chr4 (84-129)||(29205542-29205587)
chr4 (84-129)||(37203326-37203371)
chr4 (90-130)||(2054123-2054163)
chr4 (57-129)||(2361915-2361986)
chr4 (84-128)||(3947702-3947746)
chr4 (84-128)||(5922532-5922576)
chr4 (84-128)||(30982808-30982852)
chr4 (84-128)||(40965345-40965389)
chr4 (94-129)||(3064868-3064903)
chr4 (93-128)||(4383449-4383484)
chr4 (84-127)||(22440559-22440602)
chr4 (86-129)||(30094089-30094132)
chr4 (90-129)||(30299009-30299048)
chr4 (90-129)||(30327877-30327916)
chr4 (92-130)||(23386240-23386278)
chr4 (91-129)||(28470446-28470484)
chr4 (15-53)||(35723420-35723458)
chr4 (85-130)||(12884346-12884391)
chr4 (84-129)||(12895055-12895100)
chr4 (84-129)||(16184905-16184950)
chr4 (15-52)||(17345451-17345488)
chr4 (84-129)||(19482753-19482798)
chr4 (84-125)||(27706110-27706151)
chr4 (86-127)||(28000672-28000713)
chr4 (57-130)||(35157924-35157996)
chr4 (88-129)||(42640602-42640643)
chr4 (11-55)||(847933-847977)
chr4 (57-129)||(10133756-10133828)
chr4 (69-129)||(11931350-11931410)
chr4 (93-129)||(18844423-18844459)
chr4 (57-129)||(20521785-20521857)
chr4 (86-130)||(25950471-25950515)
chr4 (97-129)||(42015047-42015079)
chr4 (57-129)||(49431074-49431145)
[»] chr1 (60 HSPs)
chr1 (57-130)||(22515826-22515898)
chr1 (57-129)||(31694639-31694710)
chr1 (70-130)||(16812616-16812676)
chr1 (57-127)||(42359391-42359460)
chr1 (84-129)||(6427549-6427594)
chr1 (56-129)||(32899937-32900010)
chr1 (57-130)||(47989556-47989628)
chr1 (57-129)||(1815305-1815376)
chr1 (84-132)||(2218302-2218350)
chr1 (84-129)||(9828129-9828174)
chr1 (84-129)||(21365992-21366037)
chr1 (84-129)||(40917834-40917879)
chr1 (85-129)||(22881567-22881611)
chr1 (85-129)||(30359440-30359484)
chr1 (57-129)||(37598879-37598950)
chr1 (54-130)||(38075908-38075984)
chr1 (84-127)||(1486646-1486689)
chr1 (84-127)||(16297223-16297266)
chr1 (86-129)||(22947806-22947849)
chr1 (86-129)||(27965940-27965983)
chr1 (84-130)||(18556384-18556430)
chr1 (92-130)||(35702541-35702579)
chr1 (84-129)||(5944368-5944413)
chr1 (84-129)||(17831462-17831507)
chr1 (84-129)||(29144320-29144365)
chr1 (57-130)||(46348322-46348394)
chr1 (84-129)||(46940748-46940793)
chr1 (57-129)||(6936334-6936406)
chr1 (84-128)||(10233330-10233374)
chr1 (57-129)||(18337377-18337448)
chr1 (85-129)||(36878541-36878585)
chr1 (84-128)||(40258874-40258918)
chr1 (57-129)||(51410073-51410144)
chr1 (87-130)||(113370-113413)
chr1 (69-128)||(2445932-2445991)
chr1 (86-129)||(7918154-7918197)
chr1 (86-129)||(15765834-15765877)
chr1 (94-129)||(17705546-17705581)
chr1 (89-124)||(26830666-26830701)
chr1 (14-53)||(36878446-36878485)
chr1 (90-132)||(398730-398772)
chr1 (15-53)||(2896156-2896194)
chr1 (87-129)||(5898206-5898248)
chr1 (84-130)||(6574051-6574097)
chr1 (15-53)||(17831566-17831604)
chr1 (63-129)||(20157284-20157350)
chr1 (63-129)||(22794018-22794084)
chr1 (91-129)||(34741927-34741965)
chr1 (91-129)||(35919226-35919264)
chr1 (56-130)||(42004881-42004954)
chr1 (86-132)||(43113010-43113056)
chr1 (84-129)||(1704935-1704980)
chr1 (99-128)||(5927281-5927310)
chr1 (11-52)||(8842750-8842791)
chr1 (93-130)||(9630560-9630597)
chr1 (84-125)||(48040418-48040459)
chr1 (54-114)||(19637813-19637872)
chr1 (57-129)||(38078601-38078672)
chr1 (11-55)||(41877503-41877547)
chr1 (93-129)||(48450550-48450586)
[»] chr3 (46 HSPs)
chr3 (54-129)||(40993275-40993349)
chr3 (84-130)||(34185051-34185097)
chr3 (84-129)||(11610583-11610628)
chr3 (57-129)||(20503513-20503584)
chr3 (57-129)||(55401123-55401194)
chr3 (54-128)||(8789489-8789564)
chr3 (84-129)||(27505325-27505370)
chr3 (84-129)||(40052386-40052431)
chr3 (85-129)||(2408590-2408634)
chr3 (85-125)||(14829776-14829816)
chr3 (63-127)||(24204983-24205047)
chr3 (57-129)||(52369834-52369906)
chr3 (84-127)||(4987222-4987265)
chr3 (86-129)||(14979225-14979268)
chr3 (86-128)||(34910393-34910435)
chr3 (58-128)||(37077418-37077488)
chr3 (79-129)||(49651716-49651766)
chr3 (88-129)||(18427027-18427068)
chr3 (56-129)||(25074841-25074914)
chr3 (84-129)||(41961579-41961624)
chr3 (84-124)||(1509641-1509681)
chr3 (93-129)||(4990912-4990948)
chr3 (84-128)||(15999951-15999995)
chr3 (94-129)||(8842413-8842448)
chr3 (84-127)||(25775581-25775624)
chr3 (97-128)||(32804485-32804516)
chr3 (84-130)||(3163970-3164016)
chr3 (11-53)||(5441066-5441108)
chr3 (15-53)||(8383243-8383281)
chr3 (57-123)||(12704597-12704663)
chr3 (91-129)||(16789103-16789141)
chr3 (88-129)||(3730108-3730149)
chr3 (84-133)||(8039760-8039809)
chr3 (57-129)||(10955000-10955074)
chr3 (57-130)||(21211341-21211414)
chr3 (84-128)||(1389912-1389956)
chr3 (54-122)||(3631729-3631796)
chr3 (20-56)||(8039867-8039903)
chr3 (86-130)||(8101891-8101935)
chr3 (89-129)||(8903514-8903554)
chr3 (93-129)||(11493336-11493372)
chr3 (86-130)||(12083959-12084003)
chr3 (94-126)||(15544768-15544800)
chr3 (93-129)||(21861658-21861694)
chr3 (84-128)||(25211604-25211648)
chr3 (86-130)||(35223014-35223058)
[»] chr7 (43 HSPs)
chr7 (56-130)||(7133211-7133285)
chr7 (57-129)||(24339701-24339772)
chr7 (84-129)||(5409771-5409816)
chr7 (57-129)||(21880200-21880271)
chr7 (84-135)||(6490790-6490841)
chr7 (84-122)||(18215144-18215182)
chr7 (84-129)||(598282-598327)
chr7 (84-129)||(9778579-9778624)
chr7 (84-129)||(43027404-43027449)
chr7 (84-128)||(32287404-32287448)
chr7 (54-128)||(20549836-20549909)
chr7 (84-130)||(40287301-40287347)
chr7 (84-129)||(1401097-1401142)
chr7 (84-129)||(1433533-1433578)
chr7 (85-126)||(8842282-8842323)
chr7 (84-129)||(14729777-14729822)
chr7 (84-129)||(29763129-29763174)
chr7 (57-129)||(15680857-15680928)
chr7 (93-129)||(35862034-35862070)
chr7 (86-129)||(21568561-21568604)
chr7 (11-54)||(22484007-22484050)
chr7 (84-130)||(32093953-32094000)
chr7 (65-124)||(43250059-43250118)
chr7 (11-53)||(2425768-2425810)
chr7 (84-130)||(17852074-17852120)
chr7 (91-129)||(28973881-28973919)
chr7 (91-129)||(29812598-29812636)
chr7 (95-129)||(30813882-30813916)
chr7 (15-53)||(32308106-32308144)
chr7 (59-129)||(41229237-41229307)
chr7 (92-129)||(3991395-3991432)
chr7 (11-56)||(5235968-5236013)
chr7 (84-129)||(21864882-21864927)
chr7 (84-129)||(24105752-24105797)
chr7 (22-55)||(28155563-28155596)
chr7 (84-129)||(40131939-40131984)
chr7 (84-124)||(13770770-13770810)
chr7 (98-130)||(19213881-19213913)
chr7 (86-130)||(25822742-25822786)
chr7 (15-55)||(27945027-27945067)
chr7 (95-127)||(28943351-28943383)
chr7 (85-129)||(38134335-38134379)
chr7 (57-129)||(38804489-38804561)
[»] chr2 (36 HSPs)
chr2 (57-127)||(2438661-2438730)
chr2 (57-129)||(37419802-37419873)
chr2 (86-129)||(11223793-11223836)
chr2 (85-135)||(44635568-44635618)
chr2 (57-130)||(18840952-18841024)
chr2 (79-130)||(15907850-15907901)
chr2 (84-130)||(38117098-38117144)
chr2 (84-129)||(26769596-26769641)
chr2 (57-129)||(35056927-35056998)
chr2 (87-130)||(21782743-21782786)
chr2 (86-127)||(19942341-19942382)
chr2 (84-129)||(37559051-37559096)
chr2 (88-129)||(39323316-39323357)
chr2 (84-129)||(42511322-42511367)
chr2 (54-106)||(5367237-5367288)
chr2 (84-124)||(23058389-23058429)
chr2 (62-129)||(6180790-6180857)
chr2 (86-129)||(10535685-10535728)
chr2 (86-129)||(12748743-12748786)
chr2 (57-128)||(28596517-28596587)
chr2 (86-128)||(3444827-3444869)
chr2 (87-129)||(18622679-18622721)
chr2 (91-129)||(34221463-34221501)
chr2 (93-135)||(34691763-34691805)
chr2 (93-135)||(34714175-34714217)
chr2 (88-129)||(22084756-22084797)
chr2 (91-128)||(23354582-23354619)
chr2 (84-129)||(24975255-24975300)
chr2 (84-129)||(32749754-32749799)
chr2 (57-129)||(15972921-15972992)
chr2 (86-130)||(18631350-18631394)
chr2 (93-129)||(19536361-19536397)
chr2 (21-53)||(21616754-21616786)
chr2 (91-127)||(23354926-23354962)
chr2 (85-129)||(30717459-30717503)
chr2 (84-128)||(44860405-44860449)
[»] chr6 (46 HSPs)
chr6 (57-129)||(10339054-10339125)
chr6 (54-129)||(7378024-7378098)
chr6 (57-130)||(28152146-28152218)
chr6 (57-126)||(32978842-32978910)
chr6 (93-129)||(426478-426514)
chr6 (57-129)||(4877991-4878061)
chr6 (57-129)||(9107299-9107370)
chr6 (57-129)||(16766756-16766827)
chr6 (84-128)||(31959224-31959268)
chr6 (57-129)||(34595182-34595253)
chr6 (90-129)||(10770607-10770646)
chr6 (86-129)||(17327590-17327633)
chr6 (84-130)||(7248443-7248489)
chr6 (84-126)||(8389411-8389453)
chr6 (84-126)||(9025448-9025490)
chr6 (86-127)||(5569825-5569866)
chr6 (84-129)||(7938174-7938219)
chr6 (84-129)||(8365448-8365493)
chr6 (84-129)||(8776908-8776953)
chr6 (88-129)||(12236737-12236778)
chr6 (86-127)||(26178620-26178661)
chr6 (87-128)||(31385007-31385048)
chr6 (57-130)||(34446618-34446691)
chr6 (84-129)||(34894968-34895013)
chr6 (57-129)||(8714039-8714110)
chr6 (84-128)||(17841530-17841574)
chr6 (83-130)||(34073277-34073324)
chr6 (95-129)||(7723199-7723233)
chr6 (84-130)||(13360312-13360358)
chr6 (15-53)||(20371145-20371183)
chr6 (96-130)||(32511605-32511639)
chr6 (84-129)||(3209473-3209518)
chr6 (54-127)||(7265535-7265607)
chr6 (92-129)||(8805524-8805561)
chr6 (93-130)||(9997792-9997829)
chr6 (20-53)||(19040343-19040376)
chr6 (84-129)||(25207814-25207859)
chr6 (100-129)||(28919488-28919517)
chr6 (93-129)||(2117139-2117175)
chr6 (93-129)||(5732474-5732510)
chr6 (57-129)||(5970037-5970108)
chr6 (93-129)||(10649371-10649407)
chr6 (89-129)||(10842612-10842652)
chr6 (57-129)||(18367895-18367966)
chr6 (85-129)||(28715370-28715414)
chr6 (89-129)||(32839571-32839611)
[»] scaffold0652 (1 HSPs)
scaffold0652 (57-128)||(403-473)
[»] chr5 (45 HSPs)
chr5 (84-129)||(19820328-19820373)
chr5 (57-130)||(39698600-39698672)
chr5 (87-129)||(14873599-14873641)
chr5 (57-127)||(21190998-21191067)
chr5 (91-130)||(17123128-17123167)
chr5 (86-129)||(21576685-21576728)
chr5 (91-130)||(35017124-35017163)
chr5 (84-126)||(39268541-39268583)
chr5 (84-129)||(7677790-7677835)
chr5 (84-121)||(17088365-17088402)
chr5 (84-129)||(32766872-32766917)
chr5 (84-129)||(38464313-38464358)
chr5 (84-129)||(42893434-42893479)
chr5 (84-129)||(43564955-43565000)
chr5 (93-129)||(10298633-10298669)
chr5 (57-117)||(15382533-15382592)
chr5 (93-129)||(22423764-22423800)
chr5 (57-129)||(28588614-28588685)
chr5 (87-127)||(43001882-43001922)
chr5 (86-129)||(21194063-21194106)
chr5 (86-129)||(40000493-40000536)
chr5 (57-120)||(43554574-43554636)
chr5 (84-130)||(16304365-16304411)
chr5 (87-129)||(17593663-17593705)
chr5 (11-53)||(27144445-27144487)
chr5 (63-129)||(41558588-41558654)
chr5 (84-129)||(2419941-2419986)
chr5 (84-129)||(2436985-2437030)
chr5 (92-125)||(4105341-4105374)
chr5 (14-51)||(6035468-6035505)
chr5 (90-123)||(6035559-6035592)
chr5 (15-56)||(15410480-15410521)
chr5 (93-130)||(24906251-24906288)
chr5 (54-127)||(30502330-30502402)
chr5 (54-127)||(30542673-30542745)
chr5 (84-129)||(31084402-31084447)
chr5 (84-129)||(37328775-37328820)
chr5 (20-53)||(38816730-38816763)
chr5 (92-128)||(3966596-3966632)
chr5 (87-127)||(19579789-19579829)
chr5 (57-129)||(21522809-21522880)
chr5 (57-129)||(21533375-21533446)
chr5 (23-55)||(27932229-27932261)
chr5 (86-130)||(30098413-30098457)
chr5 (21-53)||(34879342-34879374)
[»] scaffold0053 (1 HSPs)
scaffold0053 (57-129)||(8846-8917)
[»] scaffold0793 (1 HSPs)
scaffold0793 (84-129)||(4821-4866)
[»] scaffold0003 (2 HSPs)
scaffold0003 (84-129)||(241679-241724)
scaffold0003 (86-129)||(236914-236957)
[»] scaffold0019 (1 HSPs)
scaffold0019 (57-129)||(71784-71855)
[»] scaffold0475 (1 HSPs)
scaffold0475 (86-129)||(3384-3427)
[»] scaffold0020 (1 HSPs)
scaffold0020 (84-130)||(135262-135308)
[»] scaffold0004 (2 HSPs)
scaffold0004 (86-128)||(92898-92940)
scaffold0004 (15-55)||(92793-92833)
[»] scaffold0136 (1 HSPs)
scaffold0136 (57-129)||(3778-3849)
[»] scaffold0086 (1 HSPs)
scaffold0086 (85-129)||(3014-3058)
[»] scaffold0027 (1 HSPs)
scaffold0027 (94-130)||(46741-46777)
[»] scaffold0007 (1 HSPs)
scaffold0007 (63-127)||(225199-225263)
[»] scaffold0009 (1 HSPs)
scaffold0009 (84-122)||(188474-188512)
[»] scaffold0450 (1 HSPs)
scaffold0450 (84-129)||(8564-8609)
[»] scaffold0380 (1 HSPs)
scaffold0380 (84-129)||(8675-8720)
[»] scaffold0361 (1 HSPs)
scaffold0361 (84-129)||(14601-14646)
[»] scaffold0103 (1 HSPs)
scaffold0103 (87-128)||(51900-51941)
[»] scaffold0011 (1 HSPs)
scaffold0011 (84-129)||(17542-17587)
[»] scaffold0154 (1 HSPs)
scaffold0154 (57-129)||(13472-13543)
[»] scaffold0128 (1 HSPs)
scaffold0128 (84-128)||(32778-32822)
[»] scaffold0057 (1 HSPs)
scaffold0057 (93-129)||(24119-24155)
[»] scaffold0018 (1 HSPs)
scaffold0018 (15-55)||(192282-192322)


Alignment Details
Target: chr8 (Bit Score: 424; Significance: 0; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 424; E-Value: 0
Query Start/End: Original strand, 15 - 490
Target Start/End: Original strand, 17751661 - 17752136
Alignment:
Q  15 gacaatgacacgccggcaccgctaataatttgagaaaattatgtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagt 114  Q
    |||| |||||||||| ||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17751661 gacactgacacgccgacaccggtagtaatttcagaaaattatgtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatccgaggagt 17751760  T
Q  115 gtccgtgcttcatagtgtgtgtcaatacaatatttatttcatctattgtttcattaaactttgaagtagtggccataccgctacacactatacaactata 214  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17751761 gtccgcgcttcatagtgtgtgtcaatacaatatttatttcatctattgtttcattaaactttgaagtagtggccataccgctacacactatacaactata 17751860  T
Q  215 acattttggtggttttggttacactccgccatcctttattgactgcatagatcttagaatattttgggtttttaattgtacatgtaagatcgattggttg 314  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17751861 acattttggtggttttggttacacttcgccatcctttattgactgcatagatcttagaatattttgggtttttaattgtacatgtaagatcgattggttg 17751960  T
Q  315 ccctaattaggaaaaatgttcggagcagattgtcaaatgcagattaacatccttgtagttatggctataattgatgctgaattaggcatactctctgttt 414  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17751961 ccctaattaggaaaaatgttaggagcagattgtcaaatgcagattaacatccttgtagttatggctataattgatgccgaattaggcatactctctgttt 17752060  T
Q  415 tcatccgaaaattcccaaggagggaaaatgtaggtctcctggatacccagggtatgggatagatagttttctgtat 490  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  17752061 tcatccgaaaatccccaaggagggaaaatgtaggtctcctggataccccgggtatgggatagatagttttcagtat 17752136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 424; E-Value: 0
Query Start/End: Original strand, 15 - 490
Target Start/End: Original strand, 17760648 - 17761123
Alignment:
Q  15 gacaatgacacgccggcaccgctaataatttgagaaaattatgtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagt 114  Q
    |||| |||||||||| ||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17760648 gacactgacacgccgacaccggtagtaatttcagaaaattatgtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatccgaggagt 17760747  T
Q  115 gtccgtgcttcatagtgtgtgtcaatacaatatttatttcatctattgtttcattaaactttgaagtagtggccataccgctacacactatacaactata 214  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17760748 gtccgcgcttcatagtgtgtgtcaatacaatatttatttcatctattgtttcattaaactttgaagtagtggccataccgctacacactatacaactata 17760847  T
Q  215 acattttggtggttttggttacactccgccatcctttattgactgcatagatcttagaatattttgggtttttaattgtacatgtaagatcgattggttg 314  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17760848 acattttggtggttttggttacacttcgccatcctttattgactgcatagatcttagaatattttgggtttttaattgtacatgtaagatcgattggttg 17760947  T
Q  315 ccctaattaggaaaaatgttcggagcagattgtcaaatgcagattaacatccttgtagttatggctataattgatgctgaattaggcatactctctgttt 414  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17760948 ccctaattaggaaaaatgttaggagcagattgtcaaatgcagattaacatccttgtagttatggctataattgatgccgaattaggcatactctctgttt 17761047  T
Q  415 tcatccgaaaattcccaaggagggaaaatgtaggtctcctggatacccagggtatgggatagatagttttctgtat 490  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  17761048 tcatccgaaaatccccaaggagggaaaatgtaggtctcctggataccccgggtatgggatagatagttttcagtat 17761123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 129 - 359
Target Start/End: Original strand, 17737641 - 17737872
Alignment:
Q  129 gtgtgtgtcaatacaatatttatttcatctattgtttcattaaactttgaagtagtggccataccgctacacactatacaactataacattttggtggtt 228  Q
    ||||| || ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  17737641 gtgtgcgttaatacaatattaatttcatcaattgtttcattaaactttgaagtagtggccataccgctacacactatacagctatatcattttggtggtt 17737740  T
Q  229 ttggttacactccgccatcctttattgactgcatagatcttagaatattttgggtttttaa-ttgtacatgtaagatcgattggttgccctaattaggaa 327  Q
    |||||||||||||||| | ||| | |||    |||||||||| |||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||    
T  17737741 ttggttacactccgccgttcttcaatgatcatatagatcttacaatattttgggtatttaatttgtatatgtaagatcgattggttgccctaattaggaa 17737840  T
Q  328 aaatgttcggagcagattgtcaaatgcagatt 359  Q
    ||||||| ||||||||||| ||| ||||||||    
T  17737841 aaatgttgggagcagattgccaattgcagatt 17737872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 133 - 363
Target Start/End: Original strand, 15734182 - 15734413
Alignment:
Q  133 gtgtcaatacaatatttatttcatctattgtttcattaaactttgaagtagtggccataccgctacacactatacaactataacattttggtggttttgg 232  Q
    |||| ||||||||||  ||||||| |||||||||||||||||||||||| |||| ||||||||||| ||||||||| ||||| |||||| ||||||||||    
T  15734182 gtgttaatacaatataaatttcatgtattgtttcattaaactttgaagtggtggtcataccgctacccactatacagctatagcatttttgtggttttgg 15734281  T
Q  233 ttacactccgccatcctttattgactgcatagatcttagaatattttgggtttttaa-ttgtacatgtaagatcgattggttgccctaattaggaaaaat 331  Q
    |||||||||||||| ||| ||||||    |||||||||||||||||||||| ||||| ||||| ||||||  ||||||||||||||||||||||||||||    
T  15734282 ttacactccgccattcttcattgaccatgtagatcttagaatattttgggtatttaatttgtatatgtaaagtcgattggttgccctaattaggaaaaat 15734381  T
Q  332 gttcggagcagattgtcaaatgcagattaaca 363  Q
    ||| ||||||||||| ||  ||||||| ||||    
T  15734382 gttaggagcagattgccatttgcagatcaaca 15734413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 29510304 - 29510233
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| ||||| |  ||||||||||||||| ||||||| ||||||||||||||||||||||    
T  29510304 gtgtcggtgtcggacac-gacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 29510233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 4673418 - 4673354
Alignment:
Q  64 tgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||| |||||||| |||||||||| ||||||||||||  ||||||||| |||||||||||    
T  4673418 tgtcggacac-gacgcatatccgacaccggaacacgcctaatccaaggagtgtctgtgcttcatag 4673354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 15816103 - 15816058
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  15816103 ccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 15816058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 22652061 - 22652106
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||    
T  22652061 ccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22652106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 5813640 - 5813707
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttc 125  Q
    ||||||||||||||||| ||| | |  ||||||||||||||||||||||  ||||||||||||||||||    
T  5813640 gtgtcggtgtcggacac-gacacgtgtccgacaccgggacacgcctaattggaggagtgtccgtgcttc 5813707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 24205820 - 24205749
Alignment:
Q  56 tgtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    ||||||||||||| ||||| ||||||  | |||||||| |||||||||||| |||||||||||||| ||||||    
T  24205820 tgtgtcggtgtcgaacaca-acgcatgtctgacaccggaacacgcctaatccgaggagtgtccgtgtttcata 24205749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 36450765 - 36450694
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||| |||||||||||| ||||| |  |||||||| |||||||||||||| |||||||||| |||||||||||    
T  36450765 gtgtaggtgtcggacac-gacgcgtgtccgacaccaggacacgcctaatccgaggagtgtctgtgcttcatag 36450694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 949278 - 949205
Alignment:
Q  55 atgtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||| |||| || ||| |||| ||||||||| ||||| ||||||||||||| ||| ||||||||||||    
T  949278 atgtgtcggtgccggatac-gacacatatccgacaccgagacactcctaatctgaggaatgttcgtgcttcatag 949205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 129
Target Start/End: Original strand, 39820482 - 39820547
Alignment:
Q  63 gtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||| ||||| |  ||||||| ||||||||||||||| ||| ||||||||||||||||||    
T  39820482 gtgtcggacaccgacgcgtgtccgacac-gggacacgcctaatccgagaagtgtccgtgcttcatag 39820547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 8343041 - 8343086
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||||||||| || ||||||| |||||||||||    
T  8343041 ccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatag 8343086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 8343401 - 8343446
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||||||||| || ||||||| |||||||||||    
T  8343401 ccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatag 8343446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 22197716 - 22197671
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||  ||||||||||||||||||||||||||||| ||||    
T  22197716 ccgacaccggatcacgcctaatctgaggagtgtccgtgctttatag 22197671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 26902141 - 26902104
Alignment:
Q  92 gggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  26902141 gggacacgccttatctgaggagtgtccgtgcttcatag 26902104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 29447529 - 29447574
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||| | |||||| ||||||||||||||||||||||    
T  29447529 ccgacaccgggacaggtctaatcggaggagtgtccgtgcttcatag 29447574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 13436954 - 13436910
Alignment:
Q  85 cgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||||||||  ||||||||| |||||||||||    
T  13436954 cgacaccgggacacgcctaatccaaggagtgtctgtgcttcatag 13436910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 16987990 - 16988030
Alignment:
Q  87 acaccgggacacgcctaatctgaggagtgtccgtgcttcat 127  Q
    |||||||||||| ||||||| ||||||||||||||||||||    
T  16987990 acaccgggacacccctaatccgaggagtgtccgtgcttcat 16988030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 426
Target Start/End: Original strand, 17737876 - 17737924
Alignment:
Q  378 gctataattgatgctgaattaggcatactctctgttttcatccgaaaat 426  Q
    ||||||||||||||  ||||||  |||||||||||||||||||||||||    
T  17737876 gctataattgatgccaaattagctatactctctgttttcatccgaaaat 17737924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 44067580 - 44067644
Alignment:
Q  63 gtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcat 127  Q
    ||||||||||| || || |  |||||||| |||||||||||||  ||||||||||||||||||||    
T  44067580 gtgtcggacactgatgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 44067644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 130
Target Start/End: Complemental strand, 16641951 - 16641908
Alignment:
Q  87 acaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    |||||||||||| ||||||| |||||||||| ||||||||||||    
T  16641951 acaccgggacacacctaatccgaggagtgtctgtgcttcatagt 16641908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 129
Target Start/End: Original strand, 25566910 - 25566949
Alignment:
Q  90 ccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| |||||||||| |||||||||||    
T  25566910 ccgggacacgcctaatccgaggagtgtctgtgcttcatag 25566949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 129
Target Start/End: Original strand, 27213601 - 27213644
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||    
T  27213601 gacaccgggacacggctaatccgagaagtgtccgtgcttcatag 27213644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 129
Target Start/End: Original strand, 31514938 - 31514973
Alignment:
Q  94 gacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||| ||||||||||||||||||||||    
T  31514938 gacacgcctaatccgaggagtgtccgtgcttcatag 31514973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 132
Target Start/End: Complemental strand, 34451032 - 34450958
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagtgt 132  Q
    ||||||||||||||||| ||| | |  | ||||| ||||||||||| |||  ||||||||||||||||||||||||    
T  34451032 gtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagtgt 34450958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 91 - 129
Target Start/End: Complemental strand, 4298867 - 4298830
Alignment:
Q  91 cgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  4298867 cgggacacgcctaatctgaggagtgt-cgtgcttcatag 4298830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 11803344 - 11803390
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||||| || ||||| |||||| |||||||||||||||||||||||    
T  11803344 ccgacacaggtacacgtctaatccgaggagtgtccgtgcttcatagt 11803390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 21465500 - 21465542
Alignment:
Q  87 acaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||| |||| ||||||||| |||||||||||||||||||||||    
T  21465500 acacagggatacgcctaatttgaggagtgtccgtgcttcatag 21465542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 86 - 128
Target Start/End: Complemental strand, 29447082 - 29447040
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    |||||| ||||||||||||||  ||||||||||||||||||||    
T  29447082 gacaccaggacacgcctaatcctaggagtgtccgtgcttcata 29447040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 86 - 124
Target Start/End: Complemental strand, 31109501 - 31109463
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgctt 124  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  31109501 gacactgggacacgcctaatccgaggagtgtccgtgctt 31109463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 37283795 - 37283749
Alignment:
Q  89 accgggacacgcctaatctgaggagtgtccgtgcttcatagtgtgtg 135  Q
    ||||||||||| |||||| |||||||| |||||||||||||| ||||    
T  37283795 accgggacacgtctaatccgaggagtgcccgtgcttcatagtttgtg 37283749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 11944750 - 11944795
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||| ||||||||||||| || |||||| ||||||||||||    
T  11944750 ccgacaccgagacacgcctaatccgatgagtgttcgtgcttcatag 11944795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 12570483 - 12570438
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||| ||||||||||||||||| || ||||||||||| ||||    
T  12570483 ccgacaccaggacacgcctaatctgaagattgtccgtgctttatag 12570438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 12570709 - 12570664
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||| ||||||||||||||||| || ||||||||||| ||||    
T  12570709 ccgacaccaggacacgcctaatctgaagattgtccgtgctttatag 12570664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 13397625 - 13397670
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||| ||||||||||||   |||||||||||||||||||||    
T  13397625 ccgacaccgagacacgcctaattcaaggagtgtccgtgcttcatag 13397670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 18407793 - 18407838
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||  |||||||||||||  ||||||||||||||||||||||    
T  18407793 ccgacactaggacacgcctaattggaggagtgtccgtgcttcatag 18407838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 117
Target Start/End: Complemental strand, 22943334 - 22943301
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtc 117  Q
    ||||||||||||||||||||||| ||||||||||    
T  22943334 ccgacaccgggacacgcctaatccgaggagtgtc 22943301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 30068013 - 30067968
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||| ||||||| ||||||| || |||||||||||||||||||    
T  30068013 ccgacactgggacacacctaatccgatgagtgtccgtgcttcatag 30067968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 38487230 - 38487157
Alignment:
Q  56 tgtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||| ||| |||||||| ||||| |  |||||||| |||||| | ||||| |||||||||| |||||||||||    
T  38487230 tgtgttggtttcggacaccgacgcgtgtccgacacccggacacacataatccgaggagtgtctgtgcttcatag 38487157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 40064036 - 40064081
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||||  |||||| |||||||||||||||| |||||    
T  40064036 ccgacaccgggacacatctaatccgaggagtgtccgtgctacatag 40064081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 39954346 - 39954314
Alignment:
Q  21 gacacgccggcaccgctaataatttgagaaaat 53  Q
    ||||||||| |||||||||||||||||||||||    
T  39954346 gacacgccgacaccgctaataatttgagaaaat 39954314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 3e-21; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 53381602 - 53381530
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| ||||| || ||||||||||||||| ||||||| ||||||||||||||||||||||    
T  53381602 gtgtcggtgtcggacactgacgcgtatccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 53381530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 24343560 - 24343632
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||| ||||| ||||| |  |||||||||||||||||||| |||||||||||||||||||||||||    
T  24343560 gtgtcggtgtccgacaccgacgcgtgtccgacaccgggacacgcctattctgaggagtgtccgtgcttcatag 24343632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 57 - 131
Target Start/End: Complemental strand, 23292997 - 23292924
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagtg 131  Q
    ||||||||||||||||| ||| | |  ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23292997 gtgtcggtgtcggacac-gacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatagtg 23292924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 63 - 129
Target Start/End: Complemental strand, 18513241 - 18513175
Alignment:
Q  63 gtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||||||||    
T  18513241 gtgtcggacaccgacgtgtgtccgacaccaggacacgcctaatctgaggagtgtccgtgcttcatag 18513175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 7012124 - 7012197
Alignment:
Q  56 tgtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||||||| ||||| || |||||||||||  || ||||||  ||||||||||||||||||||||    
T  7012124 tgtgtcggtgtcggacaccgacgcgtatccgacaccggggaacacctaatgcgaggagtgtccgtgcttcatag 7012197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 11596342 - 11596297
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  11596342 ccgacatcgggacacgcctaatctgaggagtgtccgtgcttcatag 11596297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 28964259 - 28964187
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||| ||||||||||| ||| |||| ||||||| ||||||||||||||| ||||||||||| |||||||||||    
T  28964259 gtgtctgtgtcggacac-gacacatatccgacactgggacacgcctaatccgaggagtgtccatgcttcatagt 28964187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 715590 - 715545
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||    
T  715590 ccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 715545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 752916 - 752871
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||    
T  752916 ccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 752871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 944674 - 944602
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||| |||||| |||||||||| |  ||||||||||||||| ||||||||||||||| || | |||||||||    
T  944674 gtgtcagtgtcgaacacagacgcgtgtccgacaccgggacacacctaatctgaggagtctctgagcttcatag 944602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 124
Target Start/End: Complemental strand, 3712498 - 3712458
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgctt 124  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  3712498 ccgacaccgggacacggctaatctgaggagtgtccgtgctt 3712458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 12895285 - 12895214
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| |||   || |||||| |||||||||||||||| ||||||||| ||||||||||||    
T  12895285 gtgtcggtgtcggacac-gacatgtatccgacatcgggacacgcctaatccgaggagtgttcgtgcttcatag 12895214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 34306815 - 34306744
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| ||| | |  ||||||||| ||||||||||||||||||| ||| ||||||||||||    
T  34306815 gtgtcggtgtcggacac-gacacgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcatag 34306744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 5775343 - 5775304
Alignment:
Q  90 ccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  5775343 ccgggacacgcctaatccgaggagtgtccgtgcttcatag 5775304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 8423703 - 8423656
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagtg 131  Q
    ||||||||||||||||||||||| ||| ||||||||||| ||||||||    
T  8423703 ccgacaccgggacacgcctaatcggagaagtgtccgtgcgtcatagtg 8423656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 85 - 128
Target Start/End: Complemental strand, 14465049 - 14465006
Alignment:
Q  85 cgacaccgggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    |||||| |||||||| ||||||||||||||||||||||||||||    
T  14465049 cgacactgggacacgtctaatctgaggagtgtccgtgcttcata 14465006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 129
Target Start/End: Original strand, 36635406 - 36635449
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||||||| || |||||||||||||||||||    
T  36635406 gacaccgggacacgcctaatccgaagagtgtccgtgcttcatag 36635449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 129
Target Start/End: Original strand, 40784029 - 40784072
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||    
T  40784029 gacaccgggacacacctaatccgaggagtgtccgtgcttcatag 40784072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 126
Target Start/End: Original strand, 28084598 - 28084640
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttca 126  Q
    ||||||| ||||||||||||||| |||||||||||||||||||    
T  28084598 ccgacactgggacacgcctaatccgaggagtgtccgtgcttca 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 18966583 - 18966628
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||| ||||| ||||||||||| |||||||||||||||||||||    
T  18966583 ccgacaacgggatacgcctaatctaaggagtgtccgtgcttcatag 18966628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 29205542 - 29205587
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  29205542 ccgacactgggacacgcctaatccgaggagtgttcgtgcttcatag 29205587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 37203326 - 37203371
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||||    
T  37203326 ccgacaccgggacacgtctaatccgagaagtgtccgtgcttcatag 37203371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 2054123 - 2054163
Alignment:
Q  90 ccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    |||||||||||||||||||| ||||||||||| ||||||||    
T  2054123 ccgggacacgcctaatctgaagagtgtccgtgtttcatagt 2054163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 2361986 - 2361915
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| ||| | |  | ||||||| ||||| |||||||||| |||||||||||||||||||    
T  2361986 gtgtcggtgtcggacac-gactcgtgtctgacaccgagacacacctaatctgacgagtgtccgtgcttcatag 2361915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 3947746 - 3947702
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    |||||||| |||||| ||||||| |||||||||||||||||||||    
T  3947746 ccgacaccaggacacacctaatccgaggagtgtccgtgcttcata 3947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 5922576 - 5922532
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    ||||||| ||||||||||||||||||||||||||  |||||||||    
T  5922576 ccgacactgggacacgcctaatctgaggagtgtctctgcttcata 5922532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 30982852 - 30982808
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    |||||||||||||||||||||||  | ||||||||||||||||||    
T  30982852 ccgacaccgggacacgcctaatccaaagagtgtccgtgcttcata 30982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 40965345 - 40965389
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||    
T  40965345 ccgacaccaagacacgcctaatctgaggagtgtcggtgcttcata 40965389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 129
Target Start/End: Complemental strand, 3064903 - 3064868
Alignment:
Q  94 gacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||| ||||||||||||||||||||||    
T  3064903 gacacgcctaatccgaggagtgtccgtgcttcatag 3064868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 4383449 - 4383484
Alignment:
Q  93 ggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    |||||||||||||| |||||||||||||||||||||    
T  4383449 ggacacgcctaatccgaggagtgtccgtgcttcata 4383484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 127
Target Start/End: Complemental strand, 22440602 - 22440559
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcat 127  Q
    |||||||  |||||||||||||| ||||||||||||||||||||    
T  22440602 ccgacactaggacacgcctaatccgaggagtgtccgtgcttcat 22440559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 129
Target Start/End: Original strand, 30094089 - 30094132
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||||||| || ||||||||||||| |||||    
T  30094089 gacaccgggacacgcctaatccgaagagtgtccgtgctacatag 30094132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 129
Target Start/End: Original strand, 30299009 - 30299048
Alignment:
Q  90 ccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  30299009 ccgggacacgtctaatccgaggagtgtccgtgcttcatag 30299048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 129
Target Start/End: Original strand, 30327877 - 30327916
Alignment:
Q  90 ccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  30327877 ccgggacacgtctaatccgaggagtgtccgtgcttcatag 30327916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 23386240 - 23386278
Alignment:
Q  92 gggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    |||||| |||||||| |||||||||||||||||||||||    
T  23386240 gggacatgcctaatcagaggagtgtccgtgcttcatagt 23386278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 91 - 129
Target Start/End: Original strand, 28470446 - 28470484
Alignment:
Q  91 cgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  28470446 cgggacatgcctaatccgaggagtgtccgtgcttcatag 28470484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 35723458 - 35723420
Alignment:
Q  15 gacaatgacacgccggcaccgctaataatttgagaaaat 53  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  35723458 gacactgacacgccgacaccgctaataatttgagaaaat 35723420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 12884391 - 12884346
Alignment:
Q  85 cgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||| |||| |||| |||||| |||||||||||||||||||||||    
T  12884391 cgacatcggggcacgtctaatccgaggagtgtccgtgcttcatagt 12884346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 12895100 - 12895055
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||| |||||||||  || |||||||||||||||||||    
T  12895100 ccgacaccgggatacgcctaattcgaagagtgtccgtgcttcatag 12895055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 16184905 - 16184950
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||| ||||||||||||||| |||||||||  |||||||||||    
T  16184905 ccgacactgggacacgcctaatccgaggagtgtttgtgcttcatag 16184950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 17345488 - 17345451
Alignment:
Q  15 gacaatgacacgccggcaccgctaataatttgagaaaa 52  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  17345488 gacactgacacgccgacaccgctaataatttgagaaaa 17345451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 19482753 - 19482798
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||| ||||||| ||||||| ||||||||| ||||||||||||    
T  19482753 ccgacactgggacacacctaatccgaggagtgttcgtgcttcatag 19482798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 27706151 - 27706110
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttc 125  Q
    |||| |||||||||||||||||||||||| ||| ||||||||    
T  27706151 ccgataccgggacacgcctaatctgaggaatgtacgtgcttc 27706110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 28000713 - 28000672
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcat 127  Q
    ||||||| ||||| |||||||||| |||||||||||||||||    
T  28000713 gacaccgagacacacctaatctgatgagtgtccgtgcttcat 28000672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 35157996 - 35157924
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||||||||| ||||| ||| |||  || ||||||| |||||| ||||| ||| |||||||||||||||||||    
T  35157996 gtgtcggtgtctgacac-gacacatgtccaacaccggaacacgcttaatccgagaagtgtccgtgcttcatagt 35157924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 129
Target Start/End: Original strand, 42640602 - 42640643
Alignment:
Q  88 caccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||| |||||||||||||| ||||||| ||||||||||||||    
T  42640602 caccaggacacgcctaatccgaggagtttccgtgcttcatag 42640643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 847933 - 847977
Alignment:
Q  11 cacagacaatgacacgccggcaccgctaataatttgagaaaatta 55  Q
    |||||||| ||||||||||   |||||||||||||||||||||||    
T  847933 cacagacactgacacgccgatgccgctaataatttgagaaaatta 847977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 10133756 - 10133828
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||| ||||| ||||| |  |||||||| |||||| |||||||||||||  || | ||||||||||    
T  10133756 gtgtcggtgtcagacactgacgcgtgtccgacaccaggacacacctaatctgaggaacgttcatgcttcatag 10133828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 11931350 - 11931410
Alignment:
Q  69 gacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||| |||||||  |||||||| |||||| |||||||   ||||||||||||||||||||    
T  11931350 gacaccgacgcatgtccgacaccaggacacacctaatccatggagtgtccgtgcttcatag 11931410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 18844459 - 18844423
Alignment:
Q  93 ggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  18844459 ggacacgcctaatccgagaagtgtccgtgcttcatag 18844423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 20521857 - 20521785
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| |||||||  |||| |||  |||||||||||||  |||||  |||| |||||||||    
T  20521857 gtgtcggtgtcggacaccgacgcatgtccgaaaccatgacacgcctaatccaaggagaatccgagcttcatag 20521785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 25950515 - 25950471
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||||| ||||| ||||||| ||||||||||| |||||||||||    
T  25950515 gacaccgagacacacctaatccgaggagtgtccatgcttcatagt 25950471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 42015047 - 42015079
Alignment:
Q  97 acgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||||| |||||||||||||    
T  42015047 acgcctaatctgaggagtgaccgtgcttcatag 42015079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 49431074 - 49431145
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| ||| | |  || |||||||||||||||| ||| ||||||||||| ||||| ||||    
T  49431074 gtgtcggtgtcggacac-gacacgtgtccaacaccgggacacgccttatccgaggagtgtccatgctttatag 49431145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 22515898 - 22515826
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||||||||||||||| ||| |||| ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  22515898 gtgtcggtgtcggacac-gacacatatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatagt 22515826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 31694710 - 31694639
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||||||| || ||||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  31694710 gtgtcggtgtcggacaca-acacatattcgacaccggaacacgcctaatctgaggagtgtccgtgcttcatag 31694639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 16812616 - 16812676
Alignment:
Q  70 acacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    |||| ||||| || |||| ||||||||||||||||||||||||||||||||||||||||||    
T  16812616 acaccgacgcttatccgaaaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 16812676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 57 - 127
Target Start/End: Complemental strand, 42359460 - 42359391
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcat 127  Q
    |||||||||||||||| |||||  |  ||||||||||||||||||||||| ||||||||||||||||||||    
T  42359460 gtgtcggtgtcggaca-agacgtgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 6427549 - 6427594
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  6427549 ccgacaccgggacacgcctaatctgatgagtgtccgtgcttcatag 6427594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 32899937 - 32900010
Alignment:
Q  56 tgtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||||||| |||||||  | ||||||||||||| ||||||| ||||| ||||| ||||||||||    
T  32899937 tgtgtcggtgtcggacaccgacgcatgtcggacaccgggacacccctaatccgaggattgtccttgcttcatag 32900010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 47989556 - 47989628
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||||||||||||||| ||| |||  | |||| |||||||||||||||| |||||||||||||||||||||||    
T  47989556 gtgtcggtgtcggacac-gacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttcatagt 47989628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 1815305 - 1815376
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||| ||||| ||| |||  |||||||||||||||||||||||||||||||| ||||| |||||||    
T  1815305 gtgtcggtgtccgacac-gacacatgtccgacaccgggacacgcctaatctgaggagtgaccgtgattcatag 1815376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 2218302 - 2218350
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagtgt 132  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||    
T  2218302 ccgacactaggacacgcctaatctgaggagtgtccgtgcttcatagtgt 2218350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 9828129 - 9828174
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||    
T  9828129 ccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 9828174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 21366037 - 21365992
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||    
T  21366037 ccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 21365992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 40917834 - 40917879
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  40917834 ccgacaccgggacacgcctaatccgaggactgtccgtgcttcatag 40917879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 22881611 - 22881567
Alignment:
Q  85 cgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||    
T  22881611 cgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22881567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 30359440 - 30359484
Alignment:
Q  85 cgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||    
T  30359440 cgacaacgggacacgccaaatctgaggagtgtccgtgcttcatag 30359484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 37598879 - 37598950
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| ||| | |  ||||||  ||||||||||||||| ||||||||||||||||||||||    
T  37598879 gtgtcggtgtcggacac-gacacgtgtccgacaatgggacacgcctaatccgaggagtgtccgtgcttcatag 37598950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 38075984 - 38075908
Alignment:
Q  54 tatgtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    |||||||||||||||||||  || |  |  |||||||||||||||||||||| |||||||||| | |||||||||||    
T  38075984 tatgtgtcggtgtcggacatcgatgtgtgaccgacaccgggacacgcctaatttgaggagtgtacatgcttcatagt 38075908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 84 - 127
Target Start/End: Complemental strand, 1486689 - 1486646
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcat 127  Q
    ||||||||||||||||||||||| |||||||||| |||||||||    
T  1486689 ccgacaccgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 84 - 127
Target Start/End: Complemental strand, 16297266 - 16297223
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcat 127  Q
    |||||||| |||||||||||||| ||||||||||||||||||||    
T  16297266 ccgacaccaggacacgcctaatccgaggagtgtccgtgcttcat 16297223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 129
Target Start/End: Original strand, 22947806 - 22947849
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||| |||||||||||||| ||||||||||||||||||||||    
T  22947806 gacacctggacacgcctaatccgaggagtgtccgtgcttcatag 22947849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 129
Target Start/End: Complemental strand, 27965983 - 27965940
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||    
T  27965983 gacaccgggacacgcctaatccgaggagtgtccatgcttcatag 27965940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 18556430 - 18556384
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||||||    
T  18556430 ccgacactgggacacgcctaatccgagaagtgtccgtgcttcatagt 18556384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 35702579 - 35702541
Alignment:
Q  92 gggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  35702579 gggacacgcctaatccgaggagtgtccgtgcttcatagt 35702541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 5944368 - 5944413
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||| |||||||||| ||||||||| ||||||||||||    
T  5944368 ccgacaccgggatacgcctaatccgaggagtgttcgtgcttcatag 5944413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 17831507 - 17831462
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||||||||||||| |||||||||| || |||||||    
T  17831507 ccgacaccgggacacgcctaatcttaggagtgtccatgtttcatag 17831462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 29144365 - 29144320
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||| |||||||||||| || |||||||||||||||||||    
T  29144365 ccgacaccggaacacgcctaatccgaagagtgtccgtgcttcatag 29144320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 46348394 - 46348322
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||||||||||||||| ||| | |  ||||||||| ||||||||| ||| |||| ||||||||||||||||||    
T  46348394 gtgtcggtgtcggacac-gacacgtgtccgacaccgagacacgcctgatccgaggtgtgtccgtgcttcatagt 46348322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 46940793 - 46940748
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||| |||||||||||| ||||||||| ||||||||||||    
T  46940793 ccgacaccggaacacgcctaatccgaggagtgttcgtgcttcatag 46940748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 6936406 - 6936334
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||| ||||||||||| |||||||| |||||||| | | || | ||||| ||||||||||| ||||||||||    
T  6936406 gtgtctgtgtcggacaccgacgcatatccgacaccagaatacccttaatccgaggagtgtccatgcttcatag 6936334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 10233330 - 10233374
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    |||||||| |||||| ||||||| |||||||||||||||||||||    
T  10233330 ccgacaccaggacacacctaatcagaggagtgtccgtgcttcata 10233374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 18337377 - 18337448
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||||||| || | |  ||||||| |||||| |||| ||| ||||||||||||||||||||||    
T  18337377 gtgtcggtgtcggacaca-acacgtgtccgacactgggacatgcctgatccgaggagtgtccgtgcttcatag 18337448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 36878541 - 36878585
Alignment:
Q  85 cgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||| |||||||||||||||  |||||||||||||||||||||    
T  36878541 cgacacggggacacgcctaatcccaggagtgtccgtgcttcatag 36878585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 40258918 - 40258874
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    |||||||| |||||||||||||| ||||||||||| |||||||||    
T  40258918 ccgacaccaggacacgcctaatccgaggagtgtccatgcttcata 40258874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 51410073 - 51410144
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| ||| | || ||||||||| |||||||||||||  |||||| | ||||||||||||    
T  51410073 gtgtcggtgtcggacac-gacacgtatccgacaccgagacacgcctaatccaaggagtattcgtgcttcatag 51410144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 130
Target Start/End: Original strand, 113370 - 113413
Alignment:
Q  87 acaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    |||||||||||||||||||| |||||||| || |||||||||||    
T  113370 acaccgggacacgcctaatccgaggagtgcccatgcttcatagt 113413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 2445932 - 2445991
Alignment:
Q  69 gacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    |||||||||||||  || | ||||||||||||||||| |||||||||||| || ||||||    
T  2445932 gacacagacgcatgtccaataccgggacacgcctaatttgaggagtgtccttgattcata 2445991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 129
Target Start/End: Complemental strand, 7918197 - 7918154
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||| |||||| ||||||| ||||||||||||||||||||||    
T  7918197 gacaccaggacacacctaatccgaggagtgtccgtgcttcatag 7918154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 129
Target Start/End: Original strand, 15765834 - 15765877
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||| ||||||||||||||| || |||||||||||||||||||    
T  15765834 gacactgggacacgcctaatccgaagagtgtccgtgcttcatag 15765877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 129
Target Start/End: Complemental strand, 17705581 - 17705546
Alignment:
Q  94 gacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||| ||||||||||||||||||||||||||||    
T  17705581 gacacgcttaatctgaggagtgtccgtgcttcatag 17705546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 124
Target Start/End: Original strand, 26830666 - 26830701
Alignment:
Q  89 accgggacacgcctaatctgaggagtgtccgtgctt 124  Q
    |||||||||||||||||| |||||||||||||||||    
T  26830666 accgggacacgcctaatcagaggagtgtccgtgctt 26830701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 36878446 - 36878485
Alignment:
Q  14 agacaatgacacgccggcaccgctaataatttgagaaaat 53  Q
    ||||| |||||||||| |||||||||||||||||||||||    
T  36878446 agacactgacacgccgacaccgctaataatttgagaaaat 36878485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 398772 - 398730
Alignment:
Q  90 ccgggacacgcctaatctgaggagtgtccgtgcttcatagtgt 132  Q
    |||||||||||||||||| || |||||||||||||||| ||||    
T  398772 ccgggacacgcctaatctaagaagtgtccgtgcttcatcgtgt 398730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 2896194 - 2896156
Alignment:
Q  15 gacaatgacacgccggcaccgctaataatttgagaaaat 53  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  2896194 gacactgacacgccgacaccgctaataatttgagaaaat 2896156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 129
Target Start/End: Complemental strand, 5898248 - 5898206
Alignment:
Q  87 acaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||| |||||| ||||||||||||||||| ||||    
T  5898248 acaccgggacacgtctaatccgaggagtgtccgtgctttatag 5898206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 6574051 - 6574097
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||||| |||||||||||||||  ||||||| ||||||||||||||    
T  6574051 ccgacactgggacacgcctaatccaaggagtgaccgtgcttcatagt 6574097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 17831604 - 17831566
Alignment:
Q  15 gacaatgacacgccggcaccgctaataatttgagaaaat 53  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  17831604 gacactgacacgccgacaccgctaataatttgagaaaat 17831566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 63 - 129
Target Start/End: Complemental strand, 20157350 - 20157284
Alignment:
Q  63 gtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||| ||||| ||||| |  ||||||||| ||||| |||||| |||||||| ||||||||||||||    
T  20157350 gtgtccgacaccgacgcgtgtccgacaccgagacacacctaatttgaggagtatccgtgcttcatag 20157284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 63 - 129
Target Start/End: Complemental strand, 22794084 - 22794018
Alignment:
Q  63 gtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||| ||||| |||||||  ||||| ||||||||| ||||||  ||||||||| ||||||||||||    
T  22794084 gtgtccgacactgacgcatgtccgactccgggacacacctaattcgaggagtgtacgtgcttcatag 22794018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 91 - 129
Target Start/End: Original strand, 34741927 - 34741965
Alignment:
Q  91 cgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||||| || |||||||||||||||||||    
T  34741927 cgggacacgcctaatccgaagagtgtccgtgcttcatag 34741965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 91 - 129
Target Start/End: Complemental strand, 35919264 - 35919226
Alignment:
Q  91 cgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  35919264 cgggacacgcctaatcggaggactgtccgtgcttcatag 35919226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 42004954 - 42004881
Alignment:
Q  56 tgtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    |||||||||||||||||| |||||||  |||||||    |||||||||||  || ||||||||||||||||||||    
T  42004954 tgtgtcggtgtcggacaccgacgcatgtccgacactaa-acacgcctaattcgaagagtgtccgtgcttcatagt 42004881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 43113010 - 43113056
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcatagtgt 132  Q
    ||||||||||||| |||||||||| ||| ||| ||||||||||||||    
T  43113010 gacaccgggacacacctaatctgaagagagtctgtgcttcatagtgt 43113056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 1704980 - 1704935
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||| |||||||||||||  |||||||||| ||||||||||    
T  1704980 ccgacaccgagacacgcctaatccaaggagtgtccatgcttcatag 1704935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 128
Target Start/End: Complemental strand, 5927310 - 5927281
Alignment:
Q  99 gcctaatctgaggagtgtccgtgcttcata 128  Q
    ||||||||||||||||||||||||||||||    
T  5927310 gcctaatctgaggagtgtccgtgcttcata 5927281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 8842791 - 8842750
Alignment:
Q  11 cacagacaatgacacgccggcaccgctaataatttgagaaaa 52  Q
    |||||||| ||||||||||||||| ||| |||||||||||||    
T  8842791 cacagacactgacacgccggcaccactagtaatttgagaaaa 8842750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 130
Target Start/End: Complemental strand, 9630597 - 9630560
Alignment:
Q  93 ggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  9630597 ggacacgcctaatccgaggagtgttcgtgcttcatagt 9630560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 48040459 - 48040418
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttc 125  Q
    ||||||| ||||||||||||||  ||||||||||||||||||    
T  48040459 ccgacactgggacacgcctaattggaggagtgtccgtgcttc 48040418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 114
Target Start/End: Original strand, 19637813 - 19637872
Alignment:
Q  54 tatgtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagt 114  Q
    |||||||||||||||||||| ||  |||| ||||||||||||| | ||||||| |||||||    
T  19637813 tatgtgtcggtgtcggacac-gatacatatccgacaccgggacgcccctaatccgaggagt 19637872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 38078672 - 38078601
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| ||| |||   | ||||| |||||||||||||| ||||||| | ||||||||||||    
T  38078672 gtgtcggtgtcggacac-gacacatgttcaacaccaggacacgcctaatccgaggagtattcgtgcttcatag 38078601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 41877547 - 41877503
Alignment:
Q  11 cacagacaatgacacgccggcaccgctaataatttgagaaaatta 55  Q
    |||||||| ||  |||||| |||||||||||||||||||||||||    
T  41877547 cacagacactggtacgccgacaccgctaataatttgagaaaatta 41877503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 48450586 - 48450550
Alignment:
Q  93 ggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  48450586 ggacacgtctaatccgaggagtgtccgtgcttcatag 48450550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 3e-18; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 40993349 - 40993275
Alignment:
Q  54 tatgtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||||||||| ||| |||  ||||||||||||||||||||||| ||||||||||| ||||||||||    
T  40993349 tatgtgtcggtgtcggacac-gacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcatag 40993275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 34185097 - 34185051
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  34185097 ccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatagt 34185051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 11610583 - 11610628
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  11610583 ccgacatcgggacacgcctaatctgaggagtgtccgtgcttcatag 11610628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 20503513 - 20503584
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||| |||||| ||| |||  | ||||||||||||||||||||| ||||||||||||||||||||||    
T  20503513 gtgtcggtgttggacac-gacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 20503584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 55401123 - 55401194
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| ||| | |  ||||||||| ||||||||||||| ||||||||||||||||||||||    
T  55401123 gtgtcggtgtcggacac-gacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 55401194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 128
Target Start/End: Complemental strand, 8789564 - 8789489
Alignment:
Q  54 tatgtgtcggtgtcggacac-agacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    |||||||||||||||||||| | || |||  | ||||||| ||||||||||||| |||||||||||||||||||||    
T  8789564 tatgtgtcggtgtcggacacgacacacatgtcggacaccgagacacgcctaatccgaggagtgtccgtgcttcata 8789489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 27505325 - 27505370
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||    
T  27505325 ccgacaccgggacatgcctaatccgaggagtgtccgtgcttcatag 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 40052386 - 40052431
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||    
T  40052386 ccgacaccgggacacgcctaatccgaggagtgttcgtgcttcatag 40052431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 2408634 - 2408590
Alignment:
Q  85 cgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||    
T  2408634 cgacaccgggacacgcctaatctaaggagtctccgtgcttcatag 2408590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 14829776 - 14829816
Alignment:
Q  85 cgacaccgggacacgcctaatctgaggagtgtccgtgcttc 125  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  14829776 cgacaccgggacacgcctaatctgaggaatgtccgtgcttc 14829816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 63 - 127
Target Start/End: Complemental strand, 24205047 - 24204983
Alignment:
Q  63 gtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcat 127  Q
    ||||||||||| ||||| |  |||||||| |||||||||||||  ||||||||||||||||||||    
T  24205047 gtgtcggacactgacgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 24204983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 52369834 - 52369906
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||| |||||||| ||||| |  || |||||||||||| |||| || ||||||||||||||||||||||    
T  52369834 gtgtcggtatcggacaccgacgcgtgtccaacaccgggacacacctattccgaggagtgtccgtgcttcatag 52369906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 84 - 127
Target Start/End: Complemental strand, 4987265 - 4987222
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcat 127  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||    
T  4987265 ccgacaccgggacacgcctaatccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 129
Target Start/End: Original strand, 14979225 - 14979268
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||||| | ||||||||||||||||||||||    
T  14979225 gacaccgggacacgcctaacccgaggagtgtccgtgcttcatag 14979268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 128
Target Start/End: Original strand, 34910393 - 34910435
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  34910393 gacaccgggacacgtctaatccgaggagtgtccgtgcttcata 34910435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 128
Target Start/End: Original strand, 37077418 - 37077488
Alignment:
Q  58 tgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    ||||||||||| |||| |||||||  ||||||| ||||||| |||||||  |||| |||||||||||||||    
T  37077418 tgtcggtgtcgtacacggacgcatgtccgacacggggacacacctaatccaaggaatgtccgtgcttcata 37077488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 129
Target Start/End: Complemental strand, 49651766 - 49651716
Alignment:
Q  79 catagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||| ||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  49651766 catatccgacaccgggacacacctaatccgagaagtgtccgtgcttcatag 49651716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 88 - 129
Target Start/End: Original strand, 18427027 - 18427068
Alignment:
Q  88 caccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||| |||||||||||||||||||||| |||||||    
T  18427027 caccgggacacacctaatctgaggagtgtccgtgtttcatag 18427068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 25074841 - 25074914
Alignment:
Q  56 tgtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||| |||||  |||| |  ||||||| ||||||| ||||||| ||||||||| ||||||||||||    
T  25074841 tgtgtcggtgtctgacaccaacgcgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcatag 25074914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 41961624 - 41961579
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||||||    
T  41961624 ccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 41961579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 124
Target Start/End: Original strand, 1509641 - 1509681
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgctt 124  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  1509641 ccgacaccggtacacgcctaatcggaggagtgtccgtgctt 1509681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 4990948 - 4990912
Alignment:
Q  93 ggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||| ||||||||||||||||||||||    
T  4990948 ggacacgcctaatccgaggagtgtccgtgcttcatag 4990912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 15999995 - 15999951
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    |||||||||||||||||||||||  |||||||||||||| |||||    
T  15999995 ccgacaccgggacacgcctaatccaaggagtgtccgtgcatcata 15999951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 129
Target Start/End: Original strand, 8842413 - 8842448
Alignment:
Q  94 gacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||| ||||||||||||||||||||||    
T  8842413 gacacgcctaatccgaggagtgtccgtgcttcatag 8842448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 127
Target Start/End: Original strand, 25775581 - 25775624
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcat 127  Q
    |||||||| |||||||||||||| ||||||||| ||||||||||    
T  25775581 ccgacaccaggacacgcctaatccgaggagtgttcgtgcttcat 25775624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 128
Target Start/End: Complemental strand, 32804516 - 32804485
Alignment:
Q  97 acgcctaatctgaggagtgtccgtgcttcata 128  Q
    ||||||||||||||||||||||||||||||||    
T  32804516 acgcctaatctgaggagtgtccgtgcttcata 32804485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 3164016 - 3163970
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||||||| ||||||||||||  ||||||||||| |||||||||||    
T  3164016 ccgacaccgagacacgcctaattcgaggagtgtccatgcttcatagt 3163970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 5441108 - 5441066
Alignment:
Q  11 cacagacaatgacacgccggcaccgctaataatttgagaaaat 53  Q
    |||||||| |||||||||| ||||||||| |||||||||||||    
T  5441108 cacagacactgacacgccgtcaccgctaaaaatttgagaaaat 5441066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 8383243 - 8383281
Alignment:
Q  15 gacaatgacacgccggcaccgctaataatttgagaaaat 53  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  8383243 gacattgacacgccgacaccgctaataatttgagaaaat 8383281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 57 - 123
Target Start/End: Complemental strand, 12704663 - 12704597
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgct 123  Q
    |||||||||||||||||  ||||||  |||||||| | ||||| ||||||  |||||||||||||||    
T  12704663 gtgtcggtgtcggacaccaacgcatgtccgacaccagaacacgtctaatcctaggagtgtccgtgct 12704597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 91 - 129
Target Start/End: Original strand, 16789103 - 16789141
Alignment:
Q  91 cgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||| |||||| |||||||||||||||||||||||    
T  16789103 cgggacacacctaatttgaggagtgtccgtgcttcatag 16789141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 129
Target Start/End: Complemental strand, 3730149 - 3730108
Alignment:
Q  88 caccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||    
T  3730149 caccgggacacacctaatccgaggagtgtccatgcttcatag 3730108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 8039809 - 8039760
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagtgtg 133  Q
    ||||||||||||||||| ||||| || |||| || |||||||||||||||    
T  8039809 ccgacaccgggacacgcttaatccgaagagtatctgtgcttcatagtgtg 8039760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 10955000 - 10955074
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgagg---agtgtccgtgcttcatag 129  Q
    ||||||||||||||||| ||| | |  ||||||| ||||||||||||||| ||||   ||||||||||||||||||    
T  10955000 gtgtcggtgtcggacac-gacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 10955074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 21211341 - 21211414
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||||||||  ||||| ||||| |  ||||||| ||||||| ||||||| |||||||||  ||||||||||||    
T  21211341 gtgtcggtgttcgacaccgacgcgtgtccgacactgggacactcctaatccgaggagtgtttgtgcttcatagt 21211414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 1389912 - 1389956
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    |||||||| ||||| ||||||||  ||||||||||||||||||||    
T  1389912 ccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 1389956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 3631729 - 3631796
Alignment:
Q  54 tatgtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgc 122  Q
    |||||| | ||||||||||| ||| |||  |||||||| ||||||||||| || |||||||||||||||    
T  3631729 tatgtgccagtgtcggacac-gacacatgtccgacaccaggacacgcctagtccgaggagtgtccgtgc 3631796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 8039903 - 8039867
Alignment:
Q  20 tgacacgccggcaccgctaataatttgagaaaattat 56  Q
    |||||||||  ||||||||||||||||||||||||||    
T  8039903 tgacacgccaacaccgctaataatttgagaaaattat 8039867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 8101935 - 8101891
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||| || ||||| |||||||||||||||| |||||||||||||    
T  8101935 gacactggtacacgtctaatctgaggagtgttcgtgcttcatagt 8101891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 8903514 - 8903554
Alignment:
Q  89 accgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||| ||||||| ||||||||| ||||||||||||    
T  8903514 accgggacacacctaatccgaggagtgttcgtgcttcatag 8903554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 11493372 - 11493336
Alignment:
Q  93 ggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  11493372 ggacacgcctaatatgaggaatgtccgtgcttcatag 11493336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 12083959 - 12084003
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    |||||| ||||  ||||||||||||||||||| ||||||||||||    
T  12083959 gacacctggacgtgcctaatctgaggagtgtctgtgcttcatagt 12084003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 94 - 126
Target Start/End: Original strand, 15544768 - 15544800
Alignment:
Q  94 gacacgcctaatctgaggagtgtccgtgcttca 126  Q
    ||||||||| |||||||||||||||||||||||    
T  15544768 gacacgccttatctgaggagtgtccgtgcttca 15544800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 21861658 - 21861694
Alignment:
Q  93 ggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  21861658 ggacacacctaatccgaggagtgtccgtgcttcatag 21861694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 25211604 - 25211648
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    |||||||| |||||||||||||||||| |||||  ||||||||||    
T  25211604 ccgacaccaggacacgcctaatctgagaagtgtttgtgcttcata 25211648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 35223014 - 35223058
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||| ||||||||| | ||| |||||||||||||||||||||||    
T  35223014 gacacggggacacgctttatccgaggagtgtccgtgcttcatagt 35223058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 7133285 - 7133211
Alignment:
Q  56 tgtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    |||||||||||||||||| ||||| |  ||||||| ||||||| |||||||||||||| ||||||||||||||||    
T  7133285 tgtgtcggtgtcggacaccgacgcgtgtccgacactgggacacacctaatctgaggagcgtccgtgcttcatagt 7133211  T

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Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 24339701 - 24339772
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| ||| | || ||||||||||||||||||||||| |||||||| |||||||||||||    
T  24339701 gtgtcggtgtcggacac-gacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttcatag 24339772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 5409816 - 5409771
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  5409816 ccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 5409771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 21880200 - 21880271
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| ||| |||  |||||||| |||||||||||||| ||| ||||||||||||||||||    
T  21880200 gtgtcggtgtcggacac-gacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcatag 21880271  T

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Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 6490790 - 6490841
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagtgtgtg 135  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||    
T  6490790 ccgacaccgggacacgcttaatccgaggagtgtccgtgcttcatagtttgtg 6490841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 18215182 - 18215144
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgc 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18215182 ccgacaccgggacacgcctaatctgaggagtgtccgtgc 18215144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 598282 - 598327
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  598282 ccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 9778579 - 9778624
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||||||||||||  |||||||||||||||||||||    
T  9778579 ccgacaccgggacacgcctaatccaaggagtgtccgtgcttcatag 9778624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 43027449 - 43027404
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||||||||| || |||||||||||||||||||    
T  43027449 ccgacaccgggacacgcctaatccgatgagtgtccgtgcttcatag 43027404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 32287448 - 32287404
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||    
T  32287448 ccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 128
Target Start/End: Original strand, 20549836 - 20549909
Alignment:
Q  54 tatgtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    ||||||||||||||||||||| || |||  ||||||  | ||||||||||||| |||||||| ||||||||||||    
T  20549836 tatgtgtcggtgtcggacaca-acacatgtccgacaatgagacacgcctaatccgaggagtgcccgtgcttcata 20549909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 40287347 - 40287301
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    |||||||||||||| |||||||| |||||||||||||||||| ||||    
T  40287347 ccgacaccgggacatgcctaatccgaggagtgtccgtgcttcgtagt 40287301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 1401097 - 1401142
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||    
T  1401097 ccgacatcgggacacacctaatctgaggagtgtccatgcttcatag 1401142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 1433533 - 1433578
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||| ||||||| |||||| ||||||||||||||||||||||    
T  1433533 ccgacaccaggacacgtctaatccgaggagtgtccgtgcttcatag 1433578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 126
Target Start/End: Complemental strand, 8842323 - 8842282
Alignment:
Q  85 cgacaccgggacacgcctaatctgaggagtgtccgtgcttca 126  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  8842323 cgacaccgggacacgcctaatccaaggagtgtccgtgcttca 8842282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 14729777 - 14729822
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||||||    
T  14729777 ccgacaccgggacacgcttaatccgaggagtgtccgtacttcatag 14729822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 29763174 - 29763129
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||| | |||||||||||||| ||||||||||||||||||||||    
T  29763174 ccgacatcaggacacgcctaatccgaggagtgtccgtgcttcatag 29763129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 15680857 - 15680928
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| ||| | |  ||||||||| |||||| |||||  ||||||||||||||||||||||    
T  15680857 gtgtcggtgtcggacac-gacacgtgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttcatag 15680928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 35862034 - 35862070
Alignment:
Q  93 ggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||| ||||||||||||||||||||||    
T  35862034 ggacacgcctaatccgaggagtgtccgtgcttcatag 35862070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 129
Target Start/End: Complemental strand, 21568604 - 21568561
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||| || |||||||||||||||| |||||||||||    
T  21568604 gacaccgggacatgcttaatctgaggagtgtctgtgcttcatag 21568561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 54
Target Start/End: Original strand, 22484007 - 22484050
Alignment:
Q  11 cacagacaatgacacgccggcaccgctaataatttgagaaaatt 54  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  22484007 cacagacactgacacgccgacaccgctaataattttagaaaatt 22484050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 32094000 - 32093953
Alignment:
Q  84 ccgacaccggg-acacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||||||||| |||||||||||| ||||||||| |||||||||||||    
T  32094000 ccgacaccggggacacgcctaatccgaggagtgttcgtgcttcatagt 32093953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 124
Target Start/End: Original strand, 43250059 - 43250118
Alignment:
Q  65 gtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgctt 124  Q
    ||||||||| ||||| |  |||||||| |||||||||||||  |||||||||||||||||    
T  43250059 gtcggacactgacgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgctt 43250118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 2425810 - 2425768
Alignment:
Q  11 cacagacaatgacacgccggcaccgctaataatttgagaaaat 53  Q
    |||||| | |||||||||||||||| |||||||||||||||||    
T  2425810 cacagatactgacacgccggcaccgttaataatttgagaaaat 2425768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 17852074 - 17852120
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||||||| ||||| ||||||  |||||||||||||||||||||||    
T  17852074 ccgacaccgagacacacctaattcgaggagtgtccgtgcttcatagt 17852120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 91 - 129
Target Start/End: Complemental strand, 28973919 - 28973881
Alignment:
Q  91 cgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  28973919 cgggacacgcctaatccgaggtgtgtccgtgcttcatag 28973881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 91 - 129
Target Start/End: Complemental strand, 29812636 - 29812598
Alignment:
Q  91 cgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||||| ||| ||||||||||||||||||    
T  29812636 cgggacacgcctaatccgagaagtgtccgtgcttcatag 29812598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 95 - 129
Target Start/End: Original strand, 30813882 - 30813916
Alignment:
Q  95 acacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||| ||||||||||||||||||||||    
T  30813882 acacgcctaatccgaggagtgtccgtgcttcatag 30813916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 32308106 - 32308144
Alignment:
Q  15 gacaatgacacgccggcaccgctaataatttgagaaaat 53  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  32308106 gacactgacacgccgacaccgctaataatttgagaaaat 32308144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 59 - 129
Target Start/End: Complemental strand, 41229307 - 41229237
Alignment:
Q  59 gtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||||  |||| |  ||| ||| | |||||||||||| |||| ||||||||||||||||||    
T  41229307 gtcggtgtcggacaccaacgcgtgtccgtcactgcgacacgcctaatatgagaagtgtccgtgcttcatag 41229237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 3991395 - 3991432
Alignment:
Q  92 gggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||| |||||||||||| |||||||||    
T  3991395 gggacacgcctaatccgaggagtgtccgggcttcatag 3991432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 5235968 - 5236013
Alignment:
Q  11 cacagacaatgacacgccggcaccgctaataatttgagaaaattat 56  Q
    |||||||| ||||||| || ||||||||||||||| ||||||||||    
T  5235968 cacagacactgacacgtcgacaccgctaataatttaagaaaattat 5236013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 21864882 - 21864927
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||||| |||||  |||||||||| |||||||||||    
T  21864882 ccgacaccgggacacgtctaattcgaggagtgtctgtgcttcatag 21864927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 24105752 - 24105797
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||||||| | |||||||||  |||||||||||    
T  24105752 ccgacaccgggacacgcctaacccgaggagtgtttgtgcttcatag 24105797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 28155563 - 28155596
Alignment:
Q  22 acacgccggcaccgctaataatttgagaaaatta 55  Q
    |||||||| |||||||||||||||||||||||||    
T  28155563 acacgccgacaccgctaataatttgagaaaatta 28155596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 40131984 - 40131939
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||| |||||||| |||||| |||||||||| |||||||||||    
T  40131984 ccgacacagggacacgtctaatccgaggagtgtctgtgcttcatag 40131939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 124
Target Start/End: Original strand, 13770770 - 13770810
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgctt 124  Q
    |||||||||| |||||||||||| || ||||||||||||||    
T  13770770 ccgacaccggaacacgcctaatccgaagagtgtccgtgctt 13770810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 98 - 130
Target Start/End: Original strand, 19213881 - 19213913
Alignment:
Q  98 cgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||||||| |||||||||||||||||||||||    
T  19213881 cgcctaatccgaggagtgtccgtgcttcatagt 19213913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 25822742 - 25822786
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    |||| ||||||| ||||||||| ||||||||||||| ||||||||    
T  25822742 gacatcgggacatgcctaatctaaggagtgtccgtgtttcatagt 25822786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 27945027 - 27945067
Alignment:
Q  15 gacaatgacacgccggcaccgctaataatttgagaaaatta 55  Q
    |||| |||||||||| |||| ||||||||||||||||||||    
T  27945027 gacactgacacgccgacaccactaataatttgagaaaatta 27945067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 95 - 127
Target Start/End: Complemental strand, 28943383 - 28943351
Alignment:
Q  95 acacgcctaatctgaggagtgtccgtgcttcat 127  Q
    |||| ||||||||||||||||||||||||||||    
T  28943383 acacacctaatctgaggagtgtccgtgcttcat 28943351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 38134379 - 38134335
Alignment:
Q  85 cgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||| |||||||||||||||| |||||||||  |||||||||||    
T  38134379 cgacatcgggacacgcctaatccgaggagtgtatgtgcttcatag 38134335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 38804561 - 38804489
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||| |||||||||||| ||||  |  ||||| |||||||| |||||||| |||||||||  |||||||||||    
T  38804561 gtgttggtgtcggacaccgacgtgtgtccgacgccgggacatgcctaatccgaggagtgtatgtgcttcatag 38804489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 57 - 127
Target Start/End: Complemental strand, 2438730 - 2438661
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcat 127  Q
    ||||||||||||||||| ||| |||  ||||||||||||||||||||||| ||||||||||||||||||||    
T  2438730 gtgtcggtgtcggacac-gacacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 37419802 - 37419873
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| || || |  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  37419802 gtgtcggtgtcggacac-gatgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 37419873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 86 - 129
Target Start/End: Complemental strand, 11223836 - 11223793
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  11223836 gacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 11223793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 85 - 135
Target Start/End: Original strand, 44635568 - 44635618
Alignment:
Q  85 cgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagtgtgtg 135  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  44635568 cgacaccgagacacgcctaatctgaggagtgtccgtgcttcatagcgtgtg 44635618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 18841024 - 18840952
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||||||||| ||||| ||| |||  ||||||||||||||| ||||||| |||||||||||||||||||||||    
T  18841024 gtgtcggtgtcagacac-gacacatgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatagt 18840952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 130
Target Start/End: Complemental strand, 15907901 - 15907850
Alignment:
Q  79 catagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    |||| |||||||||||||||||| ||||||| ||||||||||||||||||||    
T  15907901 catatccgacaccgggacacgcccaatctgatgagtgtccgtgcttcatagt 15907850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 38117144 - 38117098
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||    
T  38117144 ccgacaccgggacacgcctaatccgaggggtgtccgtgcttcatagt 38117098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 26769596 - 26769641
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||    
T  26769596 ccgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 26769641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 35056927 - 35056998
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| ||| | |  ||||||| |  |||||||||||||||||||||||||||||||||||    
T  35056927 gtgtcggtgtcggacac-gacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttcatag 35056998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 87 - 130
Target Start/End: Complemental strand, 21782786 - 21782743
Alignment:
Q  87 acaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||||||||||| |||||||| |||||||||||||||||||||    
T  21782786 acaccgggacacgtctaatctgtggagtgtccgtgcttcatagt 21782743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 19942341 - 19942382
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcat 127  Q
    ||||||||||||||||||||| ||||||||||| ||||||||    
T  19942341 gacaccgggacacgcctaatccgaggagtgtccatgcttcat 19942382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 37559051 - 37559096
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||| |||||| ||||| ||||||||||||||||||||||    
T  37559051 ccgacaccggtacacgcttaatccgaggagtgtccgtgcttcatag 37559096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 88 - 129
Target Start/End: Original strand, 39323316 - 39323357
Alignment:
Q  88 caccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||| ||||| |||||||||||||||||||||||||||||||    
T  39323316 cacctggacaggcctaatctgaggagtgtccgtgcttcatag 39323357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 42511367 - 42511322
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||| |||||||| |||||| ||||||||||||||||||||||    
T  42511367 ccgacacagggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 5367237 - 5367288
Alignment:
Q  54 tatgtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatc 106  Q
    |||||||||||||||||||| ||| |||| ||||| |||||||||||||||||    
T  5367237 tatgtgtcggtgtcggacac-gacacatatccgactccgggacacgcctaatc 5367288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 124
Target Start/End: Complemental strand, 23058429 - 23058389
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgctt 124  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  23058429 ccgacaccgggacacgcctaatccgagaagtgtccgtgctt 23058389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 129
Target Start/End: Complemental strand, 6180857 - 6180790
Alignment:
Q  62 ggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||| ||| |||  |||| || | ||||| ||||||||||||||| ||||||||||||||    
T  6180857 ggtgtcggacaccgactcatgtccgatactgagacacacctaatctgaggagtttccgtgcttcatag 6180790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 129
Target Start/End: Complemental strand, 10535728 - 10535685
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||| |||||||||||||| ||||||||| ||||||||||||    
T  10535728 gacaccaggacacgcctaatccgaggagtgttcgtgcttcatag 10535685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 129
Target Start/End: Original strand, 12748743 - 12748786
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||| ||||||| ||||||||||| |||||||||||    
T  12748743 gacaccgggacatgcctaatttgaggagtgtctgtgcttcatag 12748786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 128
Target Start/End: Original strand, 28596517 - 28596587
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    ||||||||||||||||| ||| | |  |||||||  |||||| ||||||| |||||||||||||||||||||    
T  28596517 gtgtcggtgtcggacac-gacacgtgtccgacactcggacactcctaatccgaggagtgtccgtgcttcata 28596587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 86 - 128
Target Start/End: Complemental strand, 3444869 - 3444827
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    ||||| |||||| |||||||| |||||||||||||||||||||    
T  3444869 gacactgggacatgcctaatccgaggagtgtccgtgcttcata 3444827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 18622679 - 18622721
Alignment:
Q  87 acaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||| | ||||| ||||||||||||||||||||||    
T  18622679 acaccgggacacacttaatccgaggagtgtccgtgcttcatag 18622721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 91 - 129
Target Start/End: Complemental strand, 34221501 - 34221463
Alignment:
Q  91 cgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  34221501 cgggacacgcctaatccgaggagtttccgtgcttcatag 34221463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 34691805 - 34691763
Alignment:
Q  93 ggacacgcctaatctgaggagtgtccgtgcttcatagtgtgtg 135  Q
    |||||||||||||| |||||||||||||| |||||| ||||||    
T  34691805 ggacacgcctaatccgaggagtgtccgtgtttcataatgtgtg 34691763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 34714217 - 34714175
Alignment:
Q  93 ggacacgcctaatctgaggagtgtccgtgcttcatagtgtgtg 135  Q
    |||||||||||||| |||||||||||||| |||||| ||||||    
T  34714217 ggacacgcctaatccgaggagtgtccgtgtttcataatgtgtg 34714175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 129
Target Start/End: Complemental strand, 22084797 - 22084756
Alignment:
Q  88 caccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||||| || ||||||| |||||||||||    
T  22084797 caccgggacacgcctaatccgatgagtgtctgtgcttcatag 22084756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 23354619 - 23354582
Alignment:
Q  91 cgggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    |||||||||||||||| |||||||||||||| ||||||    
T  23354619 cgggacacgcctaatccgaggagtgtccgtggttcata 23354582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 24975300 - 24975255
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||| ||||||   |||||||||||||||||||||||||||||    
T  24975300 ccgacactgggacaaatctaatctgaggagtgtccgtgcttcatag 24975255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 32749799 - 32749754
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||| ||||||||||| |||| ||||||||||| |||||||||    
T  32749799 ccgacactgggacacgccttatctaaggagtgtccgcgcttcatag 32749754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 15972921 - 15972992
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| ||| | |  ||||| ||||||||| ||||||| || || ||||||||||||||||    
T  15972921 gtgtcggtgtcggacac-gacacgtgtccgacgccgggacacacctaatccgaagaatgtccgtgcttcatag 15972992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 18631394 - 18631350
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||| ||||||||||||||  |||||||||||| ||||||||||    
T  18631394 gacactgggacacgcctaatgcgaggagtgtccgagcttcatagt 18631350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 19536397 - 19536361
Alignment:
Q  93 ggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  19536397 ggacacgcctaatccgaggagtgtccatgcttcatag 19536361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 21616754 - 21616786
Alignment:
Q  21 gacacgccggcaccgctaataatttgagaaaat 53  Q
    ||||||||| |||||||||||||||||||||||    
T  21616754 gacacgccgacaccgctaataatttgagaaaat 21616786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 23354962 - 23354926
Alignment:
Q  91 cgggacacgcctaatctgaggagtgtccgtgcttcat 127  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  23354962 cgggacacgcctaatccgaggagtgtccttgcttcat 23354926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 30717503 - 30717459
Alignment:
Q  85 cgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||| |||| ||||||||||  |||||||||||||||||||||    
T  30717503 cgacactgggatacgcctaatccaaggagtgtccgtgcttcatag 30717459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 44860405 - 44860449
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    |||||| |||||||| ||||||  |||||||||||||||||||||    
T  44860405 ccgacatcgggacacacctaattcgaggagtgtccgtgcttcata 44860449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 10339125 - 10339054
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| ||| |||  ||||||| ||||||||||||||| ||||||||||||||||||||||    
T  10339125 gtgtcggtgtcggacac-gacacatgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 10339054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 7378024 - 7378098
Alignment:
Q  54 tatgtgtcggtgtcggacac-agacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||||||||| | | ||||  |||||||||||||||| |||||||||| ||||||||||||||||||    
T  7378024 tatgtgtcggtgtcggacacgacatgcat--ccgacaccgggacacggctaatctgagaagtgtccgtgcttcatag 7378098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 28152146 - 28152218
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||||||||||||||| ||| | |  |||||||||||||| |||||||| ||||||||| |||||||||||||    
T  28152146 gtgtcggtgtcggacac-gacacgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcatagt 28152218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 32978910 - 32978842
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttca 126  Q
    ||||||||||||||||| ||| |||  |||||||||||||||| ||||||  ||||||||||||||||||    
T  32978910 gtgtcggtgtcggacac-gacacatgtccgacaccgggacacgtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 426514 - 426478
Alignment:
Q  93 ggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||||||||||||||||||||||||||    
T  426514 ggacacgcctaatctgaggagtgtccgtgcttcatag 426478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 4877991 - 4878061
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| ||| |||  ||||||| || |||||||||||| ||||||||||||||||||||||    
T  4877991 gtgtcggtgtcggacac-gacacatgtccgacacagg-acacgcctaatccgaggagtgtccgtgcttcatag 4878061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 9107370 - 9107299
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||||||| |||  |  ||||||||||||||| ||||||| |||||||| |||||||||||||    
T  9107370 gtgtcggtgtcggacaca-acgtgtgtccgacaccgggacacacctaatccgaggagtgcccgtgcttcatag 9107299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 16766756 - 16766827
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||||||| || | |  ||||||||||||||||||||||| || || ||||||||||||||||    
T  16766756 gtgtcggtgtcggacaca-acacgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttcatag 16766827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 31959224 - 31959268
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||    
T  31959224 ccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 31959268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 34595182 - 34595253
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| ||| | |  | ||||||||||||| ||||||| ||||||||||||||||||||||    
T  34595182 gtgtcggtgtcggacac-gacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 34595253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 10770646 - 10770607
Alignment:
Q  90 ccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  10770646 ccgggacatgcctaatctgaggagtgtccgtgcttcatag 10770607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 129
Target Start/End: Complemental strand, 17327633 - 17327590
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||    
T  17327633 gacacagggacacgcctaatccgaggagtgtccgtgcttcatag 17327590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 7248443 - 7248489
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    |||||||||||||||| | |||| |||||||||||||||||||||||    
T  7248443 ccgacaccgggacacgtcaaatccgaggagtgtccgtgcttcatagt 7248489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 126
Target Start/End: Complemental strand, 8389453 - 8389411
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttca 126  Q
    ||||||||||||||| ||||||| |||||||||||||||||||    
T  8389453 ccgacaccgggacacacctaatccgaggagtgtccgtgcttca 8389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 126
Target Start/End: Complemental strand, 9025490 - 9025448
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttca 126  Q
    ||||||||||||||||||||||| ||| |||||||||||||||    
T  9025490 ccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 5569825 - 5569866
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcat 127  Q
    |||||| | |||||||||||||||||||||||||||||||||    
T  5569825 gacacctgaacacgcctaatctgaggagtgtccgtgcttcat 5569866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 7938174 - 7938219
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||||    
T  7938174 ccgacaccgagacacgcctgatccgaggagtgtccgtgcttcatag 7938219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 8365493 - 8365448
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||| ||||||||||||||| ||||||| ||||||||||||||    
T  8365493 ccgacactgggacacgcctaatccgaggagtctccgtgcttcatag 8365448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 8776953 - 8776908
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  8776953 ccgacaccgagacacacctaatccgaggagtgtccgtgcttcatag 8776908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 88 - 129
Target Start/End: Original strand, 12236737 - 12236778
Alignment:
Q  88 caccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| ||||||||||| ||||||||||||    
T  12236737 caccgggacacgcctaacctgaggagtgttcgtgcttcatag 12236778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 26178661 - 26178620
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcat 127  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  26178661 gacaccgggacacgcctaatcggaggagtgtctgtgcttcat 26178620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 31385007 - 31385048
Alignment:
Q  87 acaccgggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  31385007 acaccgggacacgcctaatccaaggagtgtccgtgcttcata 31385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 34446618 - 34446691
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    |||||||||||  |||| ||||| || | ||||| ||||||| |||||||  ||||||||||||||||||||||    
T  34446618 gtgtcggtgtccaacaccgacgcgtatctgacactgggacacacctaatccaaggagtgtccgtgcttcatagt 34446691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 34895013 - 34894968
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||| ||||||| |||||| |||||||||||||||||||||||    
T  34895013 ccgacacagggacacacctaatatgaggagtgtccgtgcttcatag 34894968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 8714039 - 8714110
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| ||| |||  |||||| ||||||||||| |||| ||||||||||  ||||||||||    
T  8714039 gtgtcggtgtcggacac-gacacatttccgacatcgggacacgcccaatccgaggagtgtctttgcttcatag 8714110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 17841574 - 17841530
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    ||||||| | ||||||||||||| |||||||||||||||||||||    
T  17841574 ccgacactgagacacgcctaatccgaggagtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 130
Target Start/End: Complemental strand, 34073324 - 34073277
Alignment:
Q  83 gccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||||||||||||||  |||||  |||||||||||||||||||||||    
T  34073324 gccgacaccgggacacctctaattcgaggagtgtccgtgcttcatagt 34073277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 95 - 129
Target Start/End: Complemental strand, 7723233 - 7723199
Alignment:
Q  95 acacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||| ||||||||||||||||||||||    
T  7723233 acacgcctaatccgaggagtgtccgtgcttcatag 7723199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 13360358 - 13360312
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||||| | ||||||||||||| || ||||||||||||||||||||    
T  13360358 ccgacactgagacacgcctaatccgaagagtgtccgtgcttcatagt 13360312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 20371183 - 20371145
Alignment:
Q  15 gacaatgacacgccggcaccgctaataatttgagaaaat 53  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  20371183 gacattgacacgccgacaccgctaataatttgagaaaat 20371145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 130
Target Start/End: Complemental strand, 32511639 - 32511605
Alignment:
Q  96 cacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||||||||| |||||||||||||||||||||||    
T  32511639 cacgcctaatcggaggagtgtccgtgcttcatagt 32511605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 3209473 - 3209518
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||| |||||||||||||| |||||||||  |||||||||||    
T  3209473 ccgacacccggacacgcctaatccgaggagtgtttgtgcttcatag 3209518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 7265607 - 7265535
Alignment:
Q  54 tatgtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcat 127  Q
    ||||||||||||||||||||| |  |||  |||||||||| | | |||||||| |||||| |||||||||||||    
T  7265607 tatgtgtcggtgtcggacaca-atacatgtccgacaccggaatatgcctaatccgaggagcgtccgtgcttcat 7265535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 8805561 - 8805524
Alignment:
Q  92 gggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  8805561 gggacatgcctaatccgaggagtgtccgtgcttcatag 8805524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 130
Target Start/End: Original strand, 9997792 - 9997829
Alignment:
Q  93 ggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  9997792 ggacacccctaatctgaggagtgtccgtgcttcgtagt 9997829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 19040343 - 19040376
Alignment:
Q  20 tgacacgccggcaccgctaataatttgagaaaat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  19040343 tgacacgccgacaccgctaataatttgagaaaat 19040376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 25207814 - 25207859
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||||||||||| |||||||||| | ||||| ||||    
T  25207814 ccgacaccgggacacgcctaatatgaggagtgttcatgctttatag 25207859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 129
Target Start/End: Complemental strand, 28919517 - 28919488
Alignment:
Q  100 cctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||||||||||||||||    
T  28919517 cctaatctgaggagtgtccgtgcttcatag 28919488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 2117139 - 2117175
Alignment:
Q  93 ggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  2117139 ggacatgcctaatcggaggagtgtccgtgcttcatag 2117175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 5732510 - 5732474
Alignment:
Q  93 ggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  5732510 ggacacgcctaatccgaggagtgtccatgcttcatag 5732474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 5970108 - 5970037
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| ||| |||  |||||| ||||||||||| |||| |||||||| |  ||||||||||    
T  5970108 gtgtcggtgtcggacac-gacacatttccgacatcgggacacgcccaatccgaggagtgactatgcttcatag 5970037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 10649371 - 10649407
Alignment:
Q  93 ggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||  |||||||||||||||||||||    
T  10649371 ggacacgcctaatccaaggagtgtccgtgcttcatag 10649407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 10842612 - 10842652
Alignment:
Q  89 accgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||| |||||| |||||| ||||||||||||||||||||||    
T  10842612 accgagacacggctaatccgaggagtgtccgtgcttcatag 10842652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 18367895 - 18367966
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||| ||||| ||| |||  | ||||| ||||||||||| |||  |||||||||||||||||||||    
T  18367895 gtgtcggtgtcagacac-gacacatgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 18367966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 28715370 - 28715414
Alignment:
Q  85 cgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||||||||||  ||| ||||| ||||||||||||    
T  28715370 cgacaccgggacacgcctaattcgagaagtgtacgtgcttcatag 28715414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 32839611 - 32839571
Alignment:
Q  89 accgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||||||| ||| |||||| |||||||||||    
T  32839611 accgggacacgcctaatccgagaagtgtctgtgcttcatag 32839571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 57 - 128
Target Start/End: Complemental strand, 473 - 403
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    ||||||||||||||||| ||||| |  ||||||||||||||| ||||||| |||||||||||||||||||||    
T  473 gtgtcggtgtcggacac-gacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 19820373 - 19820328
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  19820373 ccgacaccgggacacgcctaatcagaggagtgtccgtgcttcatag 19820328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 39698600 - 39698672
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||||||||||||||| |||   || ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  39698600 gtgtcggtgtcggacac-gacatgtatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatagt 39698672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 14873599 - 14873641
Alignment:
Q  87 acaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  14873599 acaccgggacacgcctaatccgaggagtgtccgtgcttcatag 14873641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 57 - 127
Target Start/End: Complemental strand, 21191067 - 21190998
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcat 127  Q
    |||||||||||||||||| || | |  ||||| ||||||||||||||||| ||||||||||||||||||||    
T  21191067 gtgtcggtgtcggacaca-acacgtgtccgactccgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 91 - 130
Target Start/End: Original strand, 17123128 - 17123167
Alignment:
Q  91 cgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  17123128 cgggacacgcctaatccgaggagtgtccgtgcttcatagt 17123167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 129
Target Start/End: Complemental strand, 21576728 - 21576685
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||    
T  21576728 gacactgggacacgcctaatccgaggagtgtccgtgcttcatag 21576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 91 - 130
Target Start/End: Original strand, 35017124 - 35017163
Alignment:
Q  91 cgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  35017124 cgggacacgcctaatccgaggagtgtccgtgcttcatagt 35017163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 126
Target Start/End: Complemental strand, 39268583 - 39268541
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttca 126  Q
    ||||||| ||||||||||||||| |||||||||||||||||||    
T  39268583 ccgacactgggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 7677790 - 7677835
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||||    
T  7677790 ccgacaccgggacacgcctaatccgaggagagtcggtgcttcatag 7677835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 121
Target Start/End: Original strand, 17088365 - 17088402
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtg 121  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  17088365 ccgacaccgggacacgcctaatccgaggagtgtccgtg 17088402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 32766917 - 32766872
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||| ||| ||| |||||||||||||||||||||||||||||    
T  32766917 ccgacaccaggatacgtctaatctgaggagtgtccgtgcttcatag 32766872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 38464358 - 38464313
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||||    
T  38464358 ccgacaccgggacacacctaatccgaggagtgtctgtgcttcatag 38464313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 42893434 - 42893479
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||    
T  42893434 ccgacaccaggacacgcctaatatgaggagtgtccatgcttcatag 42893479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 43564955 - 43565000
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||||    
T  43564955 ccgacgccgggacacgcctaatccgagaagtgtccgtgcttcatag 43565000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 10298633 - 10298669
Alignment:
Q  93 ggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||| ||||||||||||||||||||||    
T  10298633 ggacacgcctaatccgaggagtgtccgtgcttcatag 10298669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 15382533 - 15382592
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtc 117  Q
    |||||||||| |||||| ||| |||  ||||||||||||||||||||||| ||||||||||    
T  15382533 gtgtcggtgttggacac-gacacatgtccgacaccgggacacgcctaatccgaggagtgtc 15382592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 22423800 - 22423764
Alignment:
Q  93 ggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||| ||||||||||||||||||||||    
T  22423800 ggacacgcctaatccgaggagtgtccgtgcttcatag 22423764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 28588685 - 28588614
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| ||| |||| | |||||| |||||||| ||||| || |||||||| ||||||||||    
T  28588685 gtgtcggtgtcggacac-gacacatatctgacaccaggacacgcttaatccgaagagtgtccatgcttcatag 28588614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 43001882 - 43001922
Alignment:
Q  87 acaccgggacacgcctaatctgaggagtgtccgtgcttcat 127  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  43001882 acacctggacacgcctaatccgaggagtgtccgtgcttcat 43001922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 129
Target Start/End: Complemental strand, 21194106 - 21194063
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||| ||||||||||| ||||||||||||||||| ||||    
T  21194106 gacaccggggcacgcctaatccgaggagtgtccgtgctttatag 21194063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 129
Target Start/End: Complemental strand, 40000536 - 40000493
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||| |||||| || ||||||||||||||||||||||||||    
T  40000536 gacaccgagacacgtcttatctgaggagtgtccgtgcttcatag 40000493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 120
Target Start/End: Original strand, 43554574 - 43554636
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgt 120  Q
    ||||||||||||||||| ||||| |  ||||||| ||||||||||||||| ||| |||||||||    
T  43554574 gtgtcggtgtcggacaccgacgcgtgtccgacac-gggacacgcctaatccgagaagtgtccgt 43554636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 16304411 - 16304365
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||||||| |||||| |||||| ||||| |||||||||||||||||    
T  16304411 ccgacaccgagacacgtctaatccgaggaatgtccgtgcttcatagt 16304365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 129
Target Start/End: Complemental strand, 17593705 - 17593663
Alignment:
Q  87 acaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||    
T  17593705 acaccgggacacgcttaatccgaggagtgtccgtacttcatag 17593663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 27144445 - 27144487
Alignment:
Q  11 cacagacaatgacacgccggcaccgctaataatttgagaaaat 53  Q
    |||||||| |||||||||| |||||||||||||||||| ||||    
T  27144445 cacagacactgacacgccgacaccgctaataatttgaggaaat 27144487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 63 - 129
Target Start/End: Complemental strand, 41558654 - 41558588
Alignment:
Q  63 gtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||| || |  |||||||| ||| ||||||||| ||| ||||||| |||||||||||    
T  41558654 gtgtcggacacagatgcgtgaccgacaccaggatacgcctaatttgaagagtgtcagtgcttcatag 41558588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 2419941 - 2419986
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||| ||||||||| ||||||| || |||||||||||||||||||    
T  2419941 ccgaccccgggacacacctaatccgatgagtgtccgtgcttcatag 2419986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 2436985 - 2437030
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||  ||||||||||||| ||||||||| ||||||||||||    
T  2436985 ccgacaccaagacacgcctaatccgaggagtgttcgtgcttcatag 2437030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 125
Target Start/End: Original strand, 4105341 - 4105374
Alignment:
Q  92 gggacacgcctaatctgaggagtgtccgtgcttc 125  Q
    ||||||||||||||| ||||||||||||||||||    
T  4105341 gggacacgcctaatccgaggagtgtccgtgcttc 4105374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 6035468 - 6035505
Alignment:
Q  14 agacaatgacacgccggcaccgctaataatttgagaaa 51  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  6035468 agacactgacacgccgacaccgctaataatttgagaaa 6035505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 123
Target Start/End: Original strand, 6035559 - 6035592
Alignment:
Q  90 ccgggacacgcctaatctgaggagtgtccgtgct 123  Q
    |||||||||||||||||||||||||||| |||||    
T  6035559 ccgggacacgcctaatctgaggagtgtctgtgct 6035592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 15410521 - 15410480
Alignment:
Q  15 gacaatgacacgccggcaccgctaataatttgagaaaattat 56  Q
    |||| |||||||||| ||||||||||||||| ||||||||||    
T  15410521 gacactgacacgccgacaccgctaataatttaagaaaattat 15410480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 130
Target Start/End: Complemental strand, 24906288 - 24906251
Alignment:
Q  93 ggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    |||||||||||||  |||||||||||||||||||||||    
T  24906288 ggacacgcctaattcgaggagtgtccgtgcttcatagt 24906251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 30502402 - 30502330
Alignment:
Q  54 tatgtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcat 127  Q
    |||||||||||||||||||| ||| |||  ||||||| |||||| ||||||||  |||| ||| ||||||||||    
T  30502402 tatgtgtcggtgtcggacac-gacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30502330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 30542745 - 30542673
Alignment:
Q  54 tatgtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcat 127  Q
    |||||||||||||||||||| ||| |||  ||||||| |||||| ||||||||  |||| ||| ||||||||||    
T  30542745 tatgtgtcggtgtcggacac-gacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30542673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 31084402 - 31084447
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||| |||||| |||||||| |||||||||||||| |||||||    
T  31084402 ccgacactgggacatgcctaatccgaggagtgtccgtggttcatag 31084447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 37328820 - 37328775
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||| ||||||| |||| ||||| ||||||||||||||||||||||    
T  37328820 ccgataccgggatacgcttaatccgaggagtgtccgtgcttcatag 37328775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 38816763 - 38816730
Alignment:
Q  20 tgacacgccggcaccgctaataatttgagaaaat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  38816763 tgacacgccgacaccgctaataatttgagaaaat 38816730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 3966596 - 3966632
Alignment:
Q  92 gggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    |||||||| |||||| |||||||||||||||||||||    
T  3966596 gggacacgtctaatccgaggagtgtccgtgcttcata 3966632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 19579789 - 19579829
Alignment:
Q  87 acaccgggacacgcctaatctgaggagtgtccgtgcttcat 127  Q
    |||||||||||||||||||| ||||||||| |||| |||||    
T  19579789 acaccgggacacgcctaatccgaggagtgtacgtgtttcat 19579829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 21522809 - 21522880
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| ||| | |  ||| |||||||||||||||||||  | |||||||||||| ||||||    
T  21522809 gtgtcggtgtcggacac-gacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatag 21522880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 21533375 - 21533446
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| ||| | |  ||| |||||||||||||||||||  | |||||||||||| ||||||    
T  21533375 gtgtcggtgtcggacac-gacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatag 21533446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 27932229 - 27932261
Alignment:
Q  23 cacgccggcaccgctaataatttgagaaaatta 55  Q
    ||||||| |||||||||||||||||||||||||    
T  27932229 cacgccgacaccgctaataatttgagaaaatta 27932261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 30098413 - 30098457
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    |||||| |||||| ||||||| ||||| |||||||||||||||||    
T  30098413 gacaccaggacacacctaatccgaggaatgtccgtgcttcatagt 30098457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 34879342 - 34879374
Alignment:
Q  21 gacacgccggcaccgctaataatttgagaaaat 53  Q
    ||||||||||||||||||| |||||||||||||    
T  34879342 gacacgccggcaccgctaaaaatttgagaaaat 34879374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 8846 - 8917
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| ||| | |  ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  8846 gtgtcggtgtcggacac-gacacgtgtccgacaccgagacacgcctaatctgaggagtctccgtgcttcatag 8917  T

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Target: scaffold0793 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 4866 - 4821
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||    
T  4866 ccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 4821  T

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Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 241679 - 241724
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  241679 ccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 241724  T

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Target: scaffold0003; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 129
Target Start/End: Complemental strand, 236957 - 236914
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||| |||||||||||||||||| |||||||||||    
T  236957 gacaccgggacacacctaatctgaggagtgtctgtgcttcatag 236914  T

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Target: scaffold0019 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 71784 - 71855
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||||||| || | |  |||||||||||||||| |||||| |||||||||| |||||||||||    
T  71784 gtgtcggtgtcggacaca-acacgtgtccgacaccgggacacgactaatccgaggagtgtcggtgcttcatag 71855  T

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Target: scaffold0475 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 129
Target Start/End: Original strand, 3384 - 3427
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||    
T  3384 gacactgggacacgcctaatccgaggagtgtccgtgcttcatag 3427  T

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Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 135308 - 135262
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    |||||||| ||||||||||||||||||| |||| |||||||||||||    
T  135308 ccgacaccaggacacgcctaatctgaggcgtgttcgtgcttcatagt 135262  T

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Target: scaffold0004 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 128
Target Start/End: Original strand, 92898 - 92940
Alignment:
Q  86 gacaccgggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    |||||| |||||||||||||| |||||||||||||||||||||    
T  92898 gacacctggacacgcctaatccgaggagtgtccgtgcttcata 92940  T

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Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 92793 - 92833
Alignment:
Q  15 gacaatgacacgccggcaccgctaataatttgagaaaatta 55  Q
    |||| |||||||||| |||||||||||||||||||||||||    
T  92793 gacactgacacgccgacaccgctaataatttgagaaaatta 92833  T

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Target: scaffold0136 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 3849 - 3778
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||| |||||||||||| ||| |||  |||||| || ||||||||||||| ||||||||||| ||||||||||    
T  3849 gtgttggtgtcggacac-gacacatgtccgacatcgagacacgcctaatccgaggagtgtccttgcttcatag 3778  T

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Target: scaffold0086 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 3014 - 3058
Alignment:
Q  85 cgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||| |||||||||||| |||||||||||||||| |||||    
T  3014 cgacaccggaacacgcctaatccgaggagtgtccgtgctccatag 3058  T

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Target: scaffold0027 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 130
Target Start/End: Original strand, 46741 - 46777
Alignment:
Q  94 gacacgcctaatctgaggagtgtccgtgcttcatagt 130  Q
    ||||||||||||| |||||||||||||||||||||||    
T  46741 gacacgcctaatccgaggagtgtccgtgcttcatagt 46777  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 127
Target Start/End: Complemental strand, 225263 - 225199
Alignment:
Q  63 gtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcat 127  Q
    ||||||||||| ||||| |   ||||||| |||||||||||||  ||||||||||||||||||||    
T  225263 gtgtcggacactgacgcgtgttcgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 225199  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 188474 - 188512
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgc 122  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  188474 ccgacaccaggacacgcctaatccgaggagtgtccgtgc 188512  T

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Target: scaffold0450 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 8609 - 8564
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||| || |||||||||||  ||||||||||||||||||||||    
T  8609 ccgacactggtacacgcctaattcgaggagtgtccgtgcttcatag 8564  T

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Target: scaffold0380 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 8675 - 8720
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||| |||| ||||||||||  |||||||||||||||||||||    
T  8675 ccgacactgggatacgcctaatccaaggagtgtccgtgcttcatag 8720  T

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Target: scaffold0361 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 14601 - 14646
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||| |||||||||||||  |||||||| ||||||||||||    
T  14601 ccgacaccgagacacgcctaatcgaaggagtgtacgtgcttcatag 14646  T

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Target: scaffold0103 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 51900 - 51941
Alignment:
Q  87 acaccgggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    |||||||||||||||||||| ||||| ||||| |||||||||    
T  51900 acaccgggacacgcctaatccgaggaatgtccatgcttcata 51941  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 17587 - 17542
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||||||||| |  |||| ||||||||||||||    
T  17587 ccgacaccgggacacgcctaatcagctgagtttccgtgcttcatag 17542  T

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Target: scaffold0154 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 13472 - 13543
Alignment:
Q  57 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    ||||||||||||||||| ||| | ||  ||||| ||||| || ||||||| ||||||||||||| ||||||||    
T  13472 gtgtcggtgtcggacac-gacacgtatacgacatcgggatacacctaatccgaggagtgtccgtacttcatag 13543  T

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Target: scaffold0128 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 32778 - 32822
Alignment:
Q  84 ccgacaccgggacacgcctaatctgaggagtgtccgtgcttcata 128  Q
    ||||||||||||||| | ||||| |||||||||| ||||||||||    
T  32778 ccgacaccgggacacacataatccgaggagtgtcggtgcttcata 32822  T

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Target: scaffold0057 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 24119 - 24155
Alignment:
Q  93 ggacacgcctaatctgaggagtgtccgtgcttcatag 129  Q
    |||||||||||||| || |||||||||||||||||||    
T  24119 ggacacgcctaatccgatgagtgtccgtgcttcatag 24155  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 192322 - 192282
Alignment:
Q  15 gacaatgacacgccggcaccgctaataatttgagaaaatta 55  Q
    |||| |||||||||| ||||| |||||||||||||||||||    
T  192322 gacactgacacgccgacaccgttaataatttgagaaaatta 192282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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