View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18361_high_12 (Length: 384)
Name: NF18361_high_12
Description: NF18361
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18361_high_12 |
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Alignment Details
Target: chr2 (Bit Score: 326; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 19 - 376
Target Start/End: Original strand, 36458765 - 36459122
Alignment:
| Q |
19 |
gtcaaaatctttgaaattaaattcccaaatatagctgtatgcatgatctccaggtaggttaccatttgcatcagtgagagtaagacctagttgaatcaac |
118 |
Q |
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| T |
36458765 |
gtcaaaatctttgaaattaaattcccaaatatagctgtatgcaacatctccaggtaggttaccatttgcatcagtgagagtaagacctagttgaatcaag |
36458864 |
T |
|
| Q |
119 |
ttgagattatccacgttagccttcaagaaactgtactgttctgatggatccatatggcggaggtgatacggtatattgggatcaaagttaggtgcaacga |
218 |
Q |
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| T |
36458865 |
ttgagattatccacgttagccttcaagaaactgtactgttctgatggatccatatggcggaggtgatacggtatattgggatcaaagttaggtgcaacga |
36458964 |
T |
|
| Q |
219 |
cgacaccaggaaactcggtatccattgatacatagggaaacatgtgaacgaaatttcttataagatcaaattcacgcttcagattttcagcccacacctg |
318 |
Q |
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| T |
36458965 |
cgacaccaggaaactcggtatccattgatacatagggaaacatgtgaacgaaatctcttataagatcaaattcacgctccagattttcagcccacacctg |
36459064 |
T |
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| Q |
319 |
acgaatcttaataggtttagttgaagcatctttctccttcactttggtcatgatgatg |
376 |
Q |
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| T |
36459065 |
acgaatcttaataggtttatttgaagcatcctcctccttcactttggtcatgatgatg |
36459122 |
T |
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