View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18361_high_20 (Length: 288)
Name: NF18361_high_20
Description: NF18361
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18361_high_20 |
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Alignment Details
Target: chr6 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 30352209 - 30351933
Alignment:
| Q |
1 |
ccactactttcaattgttcttttctcccatttaannnnnnnnnatcattccttcctttacaaataagctatactataatgagccagacaaatcaaaatat |
100 |
Q |
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||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30352209 |
ccactactttcaaatgttcttttctcccatttaaattttttttatcattccttcctttacaaataagctatactataatgagccagacaaatcaaaatat |
30352110 |
T |
|
| Q |
101 |
ttttgtgtttcttagttctcttaaccacattaaaacattcatacattgtgaaaatattatgagtaaactagtgttggcattttcatataagatagataaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30352109 |
ttttgtgtttcttagttctcttaaccacattaaaacattcatacattgtgaaaatattatgagtaaactagtgttggcattttcatataagatagataaa |
30352010 |
T |
|
| Q |
201 |
aaattggaatggaatttaacaagaggtaatcaggataatccatccacccaggctaatatacttatttctccaacttc |
277 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30352009 |
aaattggaatggaatttaacaagaggtaatcaggataatccatccacccaggctaatatacttatttctccaacttc |
30351933 |
T |
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