View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18361_high_6 (Length: 506)

Name: NF18361_high_6
Description: NF18361
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18361_high_6
NF18361_high_6
[»] chr3 (35 HSPs)
chr3 (319-489)||(32715963-32716143)
chr3 (155-247)||(47334688-47334780)
chr3 (173-238)||(41743601-41743666)
chr3 (1-75)||(47104348-47104421)
chr3 (1-78)||(52173723-52173800)
chr3 (173-235)||(27707192-27707254)
chr3 (194-252)||(35237765-35237823)
chr3 (181-247)||(40639781-40639847)
chr3 (1-75)||(20848912-20848985)
chr3 (155-244)||(37897728-37897817)
chr3 (173-245)||(334669-334741)
chr3 (179-243)||(24270459-24270523)
chr3 (188-247)||(331877-331936)
chr3 (173-235)||(4980287-4980349)
chr3 (155-245)||(12744947-12745037)
chr3 (181-243)||(22496957-22497019)
chr3 (1-30)||(2154232-2154261)
chr3 (1-30)||(3643388-3643417)
chr3 (194-243)||(10872678-10872727)
chr3 (1-30)||(17102778-17102807)
chr3 (1-30)||(19550270-19550299)
chr3 (1-30)||(27039799-27039828)
chr3 (1-30)||(32854141-32854170)
chr3 (1-30)||(33874739-33874768)
chr3 (1-30)||(43554414-43554443)
chr3 (1-75)||(51064863-51064936)
chr3 (1-30)||(51219277-51219306)
chr3 (1-30)||(52175744-52175773)
chr3 (42-75)||(53055713-53055746)
chr3 (1-30)||(53745474-53745503)
chr3 (1-30)||(54106287-54106316)
chr3 (179-243)||(24722693-24722757)
chr3 (201-249)||(35511863-35511911)
chr3 (171-247)||(45736689-45736765)
chr3 (171-247)||(52215942-52216018)
[»] chr1 (33 HSPs)
chr1 (155-242)||(1597235-1597322)
chr1 (155-242)||(3549825-3549912)
chr1 (1-81)||(9361947-9362026)
chr1 (159-249)||(36486589-36486678)
chr1 (1-75)||(15660567-15660640)
chr1 (155-243)||(34953902-34953990)
chr1 (155-238)||(42761499-42761582)
chr1 (173-247)||(3013674-3013748)
chr1 (1-67)||(1038071-1038136)
chr1 (1-67)||(1044977-1045042)
chr1 (173-242)||(37589661-37589730)
chr1 (194-251)||(46412701-46412758)
chr1 (171-244)||(48083509-48083582)
chr1 (1-75)||(51613391-51613464)
chr1 (153-245)||(43738609-43738701)
chr1 (171-240)||(5173444-5173510)
chr1 (180-247)||(34768281-34768348)
chr1 (173-235)||(26937875-26937937)
chr1 (194-240)||(34491207-34491253)
chr1 (1-30)||(7782975-7783004)
chr1 (1-30)||(8464633-8464662)
chr1 (1-30)||(10675926-10675955)
chr1 (1-30)||(13507794-13507823)
chr1 (1-30)||(13514982-13515011)
chr1 (1-30)||(30686435-30686464)
chr1 (1-30)||(35483963-35483992)
chr1 (1-30)||(35531479-35531508)
chr1 (1-30)||(37437237-37437266)
chr1 (48-81)||(37609278-37609311)
chr1 (1-30)||(45226761-45226790)
chr1 (190-242)||(1751112-1751164)
chr1 (155-243)||(8396996-8397084)
chr1 (188-244)||(13043419-13043475)
[»] chr4 (49 HSPs)
chr4 (173-247)||(35151663-35151737)
chr4 (153-245)||(49231322-49231414)
chr4 (171-244)||(24798189-24798262)
chr4 (155-251)||(4406239-4406335)
chr4 (153-248)||(5816583-5816678)
chr4 (179-238)||(47787005-47787064)
chr4 (173-244)||(52914062-52914133)
chr4 (1-76)||(12252082-12252156)
chr4 (188-254)||(55416295-55416361)
chr4 (157-242)||(12912616-12912701)
chr4 (173-246)||(25138747-25138820)
chr4 (1-75)||(52677333-52677406)
chr4 (1-75)||(53599974-53600047)
chr4 (155-247)||(3511755-3511847)
chr4 (171-247)||(53176310-53176386)
chr4 (188-247)||(19596077-19596136)
chr4 (153-240)||(23003971-23004058)
chr4 (158-245)||(40814718-40814805)
chr4 (197-247)||(2582896-2582946)
chr4 (173-251)||(26920670-26920748)
chr4 (173-243)||(36072634-36072704)
chr4 (189-243)||(54931899-54931953)
chr4 (173-251)||(55936051-55936129)
chr4 (174-247)||(2582810-2582883)
chr4 (1-30)||(3436255-3436284)
chr4 (1-30)||(4201506-4201535)
chr4 (1-30)||(13629381-13629410)
chr4 (1-30)||(19527396-19527425)
chr4 (1-30)||(21044935-21044964)
chr4 (171-220)||(21649362-21649411)
chr4 (194-251)||(23071404-23071461)
chr4 (1-30)||(26620539-26620568)
chr4 (1-30)||(27492386-27492415)
chr4 (1-30)||(31862174-31862203)
chr4 (173-238)||(32599544-32599609)
chr4 (1-75)||(33809070-33809143)
chr4 (40-81)||(36292602-36292643)
chr4 (1-30)||(44014101-44014130)
chr4 (1-30)||(46871948-46871977)
chr4 (1-30)||(48782227-48782256)
chr4 (188-249)||(55934640-55934701)
chr4 (1-30)||(56576291-56576320)
chr4 (194-250)||(2401039-2401095)
chr4 (43-75)||(3802143-3802175)
chr4 (155-243)||(4484120-4484208)
chr4 (155-243)||(24133644-24133732)
chr4 (194-246)||(24156224-24156276)
chr4 (179-243)||(46518782-46518845)
chr4 (194-242)||(48806263-48806311)
[»] chr2 (29 HSPs)
chr2 (173-247)||(45473079-45473153)
chr2 (155-251)||(15916731-15916827)
chr2 (173-247)||(42530556-42530630)
chr2 (155-256)||(23377988-23378089)
chr2 (179-238)||(800763-800822)
chr2 (153-251)||(1961353-1961451)
chr2 (173-245)||(15119781-15119853)
chr2 (1-78)||(32854970-32855046)
chr2 (1-68)||(2012848-2012914)
chr2 (153-247)||(7079372-7079466)
chr2 (157-247)||(31101997-31102087)
chr2 (194-244)||(38181765-38181815)
chr2 (188-242)||(40590948-40591002)
chr2 (1-64)||(43077283-43077345)
chr2 (1-30)||(479163-479192)
chr2 (1-30)||(6013499-6013528)
chr2 (1-30)||(10812223-10812252)
chr2 (173-238)||(11093541-11093606)
chr2 (1-30)||(14295947-14295976)
chr2 (1-30)||(15677481-15677510)
chr2 (1-30)||(25187317-25187346)
chr2 (173-218)||(27331790-27331835)
chr2 (173-238)||(33129085-33129150)
chr2 (1-30)||(37093474-37093503)
chr2 (1-30)||(41885649-41885678)
chr2 (155-247)||(15859553-15859645)
chr2 (194-254)||(32143401-32143461)
chr2 (155-235)||(37195098-37195178)
chr2 (171-247)||(40204505-40204581)
[»] chr5 (23 HSPs)
chr5 (155-247)||(11795782-11795874)
chr5 (179-238)||(33652838-33652897)
chr5 (1-75)||(5144182-5144255)
chr5 (174-247)||(5504379-5504452)
chr5 (1-75)||(42394312-42394385)
chr5 (171-251)||(33075127-33075207)
chr5 (182-249)||(5777253-5777320)
chr5 (1-80)||(4175664-4175742)
chr5 (1-30)||(6754363-6754392)
chr5 (1-30)||(9076077-9076106)
chr5 (1-30)||(12664864-12664893)
chr5 (1-30)||(12784626-12784655)
chr5 (1-30)||(12870083-12870112)
chr5 (1-30)||(21606442-21606471)
chr5 (1-30)||(28024443-28024472)
chr5 (1-30)||(32440096-32440125)
chr5 (1-30)||(38017461-38017490)
chr5 (1-30)||(38363197-38363226)
chr5 (153-218)||(38370418-38370483)
chr5 (222-250)||(7604302-7604330)
chr5 (173-245)||(22650860-22650932)
chr5 (197-245)||(30371337-30371385)
chr5 (159-251)||(30780068-30780160)
[»] scaffold0149 (1 HSPs)
scaffold0149 (172-247)||(24669-24744)
[»] chr8 (31 HSPs)
chr8 (173-247)||(2296476-2296550)
chr8 (1-75)||(26062688-26062761)
chr8 (174-247)||(1897860-1897933)
chr8 (1-75)||(3720660-3720733)
chr8 (155-244)||(5888341-5888430)
chr8 (179-252)||(14700311-14700384)
chr8 (1-75)||(27518894-27518967)
chr8 (40-81)||(38221787-38221828)
chr8 (179-244)||(41753763-41753828)
chr8 (171-243)||(2805819-2805891)
chr8 (155-251)||(3225826-3225922)
chr8 (1-77)||(2335411-2335486)
chr8 (1-65)||(6750605-6750668)
chr8 (1-65)||(6757396-6757459)
chr8 (1-76)||(8731014-8731088)
chr8 (173-247)||(24287787-24287861)
chr8 (1-30)||(4057312-4057341)
chr8 (179-228)||(13290105-13290154)
chr8 (1-30)||(17718527-17718556)
chr8 (1-30)||(23429933-23429962)
chr8 (194-247)||(27502903-27502956)
chr8 (173-238)||(29360759-29360824)
chr8 (1-30)||(33935247-33935276)
chr8 (1-30)||(35296068-35296097)
chr8 (1-30)||(38482979-38483008)
chr8 (1-30)||(40228319-40228348)
chr8 (173-245)||(7484681-7484753)
chr8 (43-75)||(14061377-14061409)
chr8 (188-244)||(14700246-14700302)
chr8 (191-247)||(44319523-44319579)
chr8 (92-124)||(45045480-45045512)
[»] chr7 (30 HSPs)
chr7 (190-243)||(18819937-18819990)
chr7 (159-242)||(18819981-18820064)
chr7 (155-245)||(23797352-23797442)
chr7 (1-68)||(42842056-42842122)
chr7 (188-242)||(46384431-46384485)
chr7 (153-240)||(21096196-21096283)
chr7 (172-251)||(23818422-23818501)
chr7 (1-68)||(8264934-8265000)
chr7 (181-247)||(10095721-10095787)
chr7 (153-243)||(26477167-26477257)
chr7 (153-243)||(26553607-26553697)
chr7 (1-76)||(32528518-32528592)
chr7 (194-247)||(9555345-9555398)
chr7 (1-30)||(17896713-17896742)
chr7 (173-254)||(22281868-22281949)
chr7 (212-249)||(26982829-26982866)
chr7 (1-30)||(30866926-30866955)
chr7 (1-30)||(31430583-31430612)
chr7 (179-236)||(31814703-31814760)
chr7 (1-30)||(33100023-33100052)
chr7 (1-30)||(33173831-33173860)
chr7 (194-251)||(39012974-39013031)
chr7 (44-81)||(39429906-39429943)
chr7 (1-30)||(41891294-41891323)
chr7 (194-247)||(43103074-43103127)
chr7 (155-247)||(4089131-4089223)
chr7 (183-251)||(9555258-9555326)
chr7 (190-238)||(28752160-28752208)
chr7 (1-29)||(33921964-33921992)
chr7 (43-75)||(48981611-48981643)
[»] chr6 (17 HSPs)
chr6 (174-243)||(18886314-18886383)
chr6 (1-75)||(24356242-24356315)
chr6 (173-245)||(15517154-15517226)
chr6 (155-238)||(13281580-13281663)
chr6 (1-75)||(31244937-31245010)
chr6 (155-238)||(12218456-12218539)
chr6 (1-81)||(23923901-23923980)
chr6 (188-254)||(12480067-12480133)
chr6 (153-251)||(13506878-13506975)
chr6 (1-30)||(3849089-3849118)
chr6 (1-30)||(8176460-8176489)
chr6 (1-30)||(12732200-12732229)
chr6 (191-240)||(31133193-31133242)
chr6 (194-247)||(32254906-32254959)
chr6 (1-30)||(33260724-33260753)
chr6 (181-245)||(17214199-17214263)
chr6 (194-242)||(29419872-29419920)
[»] scaffold0036 (1 HSPs)
scaffold0036 (155-242)||(89605-89692)
[»] scaffold0343 (1 HSPs)
scaffold0343 (1-62)||(7417-7477)
[»] scaffold0065 (1 HSPs)
scaffold0065 (173-241)||(39173-39241)
[»] scaffold0009 (1 HSPs)
scaffold0009 (153-236)||(216317-216400)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-30)||(49171-49200)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-30)||(77112-77141)


Alignment Details
Target: chr3 (Bit Score: 69; Significance: 1e-30; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 319 - 489
Target Start/End: Complemental strand, 32716143 - 32715963
Alignment:
Q  319 caatgatacaatacaatagcatgtcaggtttttcatattcaatgttccttaaaatctcagagctccaatcttcggttgccactctaccatgtcc------ 412  Q
    |||| ||| ||||||||| ||||||||||||||||| | || |||| || |||||| |||||||||||||||||||| ||||||||||||||||          
T  32716143 caataataaaatacaataacatgtcaggtttttcatttccactgttactcaaaatcccagagctccaatcttcggtttccactctaccatgtccatcgtt 32716044  T
Q  413 ---acggaaaatgaaactacctctgacaaaatactccatcctttgcaggttcatcttctt-tctcttttcaattcctttca 489  Q
       || ||||||||||| |||||||| |||||||  ||||||||||||||||||| ||||  | |||||||||||||||||    
T  32716043 tcaaccgaaaatgaaaccacctctgagaaaatacgtcatcctttgcaggttcatcctcttcccacttttcaattcctttca 32715963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 155 - 247
Target Start/End: Original strand, 47334688 - 47334780
Alignment:
Q  155 aattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    |||||||||| |||  ||| ||| |||||||  ||||| ||||||||||||| |||| |||||| | ||||||||||||| ||||||||||||    
T  47334688 aattaatgatgtatatgatttttattatagatcatatacatcatttaatgaatgaatctaaaatgtaaaattttacttatgataatgaccgga 47334780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 238
Target Start/End: Complemental strand, 41743666 - 41743601
Alignment:
Q  173 tctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataata 238  Q
    ||||| |||||||| ||||| ||||||||||||| |||| ||||||||||| |||| |||||||||    
T  41743666 tctttattatagaccatatacatcatttaatgaacgaatctaaaatattaatttttgcttataata 41743601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 47104348 - 47104421
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaacggagagagta 75  Q
    ||||||||||||||||||||||||||||||       | ||||||| |||||||||||||||||||||| |||||    
T  47104348 actttgaaagtgacagttaaataggaacaaaaaatttc-tctaaaagtgacaattaaaaaggaacggagggagta 47104421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 52173800 - 52173723
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaacggagagagtagta 78  Q
    ||||||||||||||||||||||| ||||||       ||||||||| ||||| ||| |||||||||||| ||||||||    
T  52173800 actttgaaagtgacagttaaatatgaacaatttttttcttctaaaagtgacagttagaaaggaacggagggagtagta 52173723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 27707254 - 27707192
Alignment:
Q  173 tctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttata 235  Q
    ||||| || |||||||||||||||||||| |||| ||||||||||||| || |||| ||||||    
T  27707254 tctttattgtagacaatatatatcatttattgaatgaatttaaaatatgaatttttgcttata 27707192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 35237765 - 35237823
Alignment:
Q  194 atcatttaatgaaagaatttaaaatattaaattttacttataataatgaccggatggta 252  Q
    ||||||||||||| ||||||||| ||| ||||||| ||||||||| ||| |||||||||    
T  35237765 atcatttaatgaatgaatttaaagtataaaattttgcttataatagtgatcggatggta 35237823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 247
Target Start/End: Original strand, 40639781 - 40639847
Alignment:
Q  181 atagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    |||||| | ||| ||||||||||||| ||||||||||| |||| |||| ||||||||| ||||||||    
T  40639781 atagaccacatacatcatttaatgaatgaatttaaaatgttaatttttgcttataatagtgaccgga 40639847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 20848912 - 20848985
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaacggagagagta 75  Q
    ||||||||||||||||||||||||||||||       | ||||||| ||||||||| |||||||||||| |||||    
T  20848912 actttgaaagtgacagttaaataggaacaaattttttc-tctaaaagtgacaattataaaggaacggagggagta 20848985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 155 - 244
Target Start/End: Original strand, 37897728 - 37897817
Alignment:
Q  155 aattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgacc 244  Q
    |||||||||| |||  ||||||| |||||||| | ||| || |||||||||| ||||||||||| || | |||| ||||||||| |||||    
T  37897728 aattaatgatgtatatgatctttattatagaccacatacataatttaatgaatgaatttaaaatgttgatttttgcttataatagtgacc 37897817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 334741 - 334669
Alignment:
Q  173 tctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccg 245  Q
    ||||| |||||||| |||||||||||||| ||||  ||||||||||||    |||| ||||||||||||||||    
T  334741 tctttattatagaccatatatatcatttattgaattaatttaaaatatggggttttgcttataataatgaccg 334669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 24270523 - 24270459
Alignment:
Q  179 ttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgac 243  Q
    |||||||  |||||||||||||||| ||  ||||||||||||| | |||| ||||||||||||||    
T  24270523 ttatagattatatatatcatttaatcaataaatttaaaatattgatttttgcttataataatgac 24270459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 247
Target Start/End: Original strand, 331877 - 331936
Alignment:
Q  188 atatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    ||||| ||||||||||||| |||| |||||| |||| |||| ||||||||| ||||||||    
T  331877 atatacatcatttaatgaatgaatctaaaatgttaatttttgcttataatagtgaccgga 331936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 4980349 - 4980287
Alignment:
Q  173 tctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttata 235  Q
    ||||| |||||||||| |||||||||||| |||| |||| |||||||| || |||| ||||||    
T  4980349 tctttattatagacaacatatatcatttattgaatgaatctaaaatatgaatttttgcttata 4980287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 155 - 245
Target Start/End: Original strand, 12744947 - 12745037
Alignment:
Q  155 aattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccg 245  Q
    |||||||||| |||  | ||||| |||||||| | ||| ||||||||||||| | || |||||| |||| |||| ||||||||| ||||||    
T  12744947 aattaatgatgtatatggtctttattatagaccacatacatcatttaatgaatgtatctaaaatgttaatttttgcttataatagtgaccg 12745037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 22497019 - 22496957
Alignment:
Q  181 atagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgac 243  Q
    |||||| | ||| ||||||||||||| |||| ||||||||||| |||| ||||||||| ||||    
T  22497019 atagaccacatacatcatttaatgaatgaatctaaaatattaatttttgcttataatagtgac 22496957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 2154232 - 2154261
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  2154232 actttgaaagtgacagttaaataggaacaa 2154261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 3643388 - 3643417
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  3643388 actttgaaagtgacagttaaataggaacaa 3643417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 10872727 - 10872678
Alignment:
Q  194 atcatttaatgaaagaatttaaaatattaaattttacttataataatgac 243  Q
    ||||||||||||| |||||||||||||| | |||| ||||||||| ||||    
T  10872727 atcatttaatgaatgaatttaaaatattgatttttgcttataatagtgac 10872678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 17102807 - 17102778
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  17102807 actttgaaagtgacagttaaataggaacaa 17102778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 19550299 - 19550270
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  19550299 actttgaaagtgacagttaaataggaacaa 19550270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 27039799 - 27039828
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  27039799 actttgaaagtgacagttaaataggaacaa 27039828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 32854141 - 32854170
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  32854141 actttgaaagtgacagttaaataggaacaa 32854170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 33874739 - 33874768
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  33874739 actttgaaagtgacagttaaataggaacaa 33874768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 43554443 - 43554414
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  43554443 actttgaaagtgacagttaaataggaacaa 43554414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 51064936 - 51064863
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaacggagagagta 75  Q
    ||||||||||||||||||||  ||||||||       || | ||||||||||||||||||||||||||| |||||    
T  51064936 actttgaaagtgacagttaatcaggaacaaaaaaattctcc-aaaaatgacaattaaaaaggaacggagggagta 51064863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 51219277 - 51219306
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  51219277 actttgaaagtgacagttaaataggaacaa 51219306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 52175773 - 52175744
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  52175773 actttgaaagtgacagttaaataggaacaa 52175744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 75
Target Start/End: Original strand, 53055713 - 53055746
Alignment:
Q  42 taaaaatgacaattaaaaaggaacggagagagta 75  Q
    ||||| ||||||||||||||||||||||||||||    
T  53055713 taaaagtgacaattaaaaaggaacggagagagta 53055746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 53745474 - 53745503
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  53745474 actttgaaagtgacagttaaataggaacaa 53745503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 54106316 - 54106287
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  54106316 actttgaaagtgacagttaaataggaacaa 54106287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 24722757 - 24722693
Alignment:
Q  179 ttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgac 243  Q
    |||||||| | ||| |||||||||| || |||| ||||||||||| |||| ||||||||| ||||    
T  24722757 ttatagaccacatacatcatttaataaatgaatctaaaatattaatttttgcttataatagtgac 24722693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 201 - 249
Target Start/End: Original strand, 35511863 - 35511911
Alignment:
Q  201 aatgaaagaatttaaaatattaaattttacttataataatgaccggatg 249  Q
    |||||| |||| |||||| || | |||||||||||||||||||||||||    
T  35511863 aatgaatgaatctaaaatgttgatttttacttataataatgaccggatg 35511911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 171 - 247
Target Start/End: Complemental strand, 45736765 - 45736689
Alignment:
Q  171 gatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    ||||||| |||||||| | ||| ||||||||||||| |||| |||| |||  | |||| ||||||||| ||||||||    
T  45736765 gatctttattatagaccacatacatcatttaatgaatgaatctaaactatcgatttttgcttataatagtgaccgga 45736689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 171 - 247
Target Start/End: Original strand, 52215942 - 52216018
Alignment:
Q  171 gatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    ||||||| |||||||| | ||| ||||||||||||  |||| |||||| || | |||| ||||||||| ||||||||    
T  52215942 gatctttattatagaccacatacatcatttaatgagtgaatctaaaatgttgatttttgcttataatagtgaccgga 52216018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 155 - 242
Target Start/End: Original strand, 1597235 - 1597322
Alignment:
Q  155 aattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatga 242  Q
    |||||||||| |||  ||||||| |||| ||| |||||||||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  1597235 aattaatgatgtatatgatctttattatcgaccatatatatcatttaatgaataaatttaaaatattaatttttacttataataatga 1597322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 155 - 242
Target Start/End: Original strand, 3549825 - 3549912
Alignment:
Q  155 aattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatga 242  Q
    |||||||||||||| || ||||| |||||||| | ||| || |||||||||| ||||||||||| |||| |||| |||||||||||||    
T  3549825 aattaatgatatatacggtctttattatagaccacatacattatttaatgaatgaatttaaaatgttaatttttgcttataataatga 3549912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 9362026 - 9361947
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaacggagagagtagtattt 81  Q
    ||||||||||||||||||||||||||||||       |||| |||||||||| |||||||||||||||| ||||| |||||    
T  9362026 actttgaaagtgacagttaaataggaacaaaaaatttcttc-aaaaatgacacttaaaaaggaacggagggagtactattt 9361947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 36486589 - 36486678
Alignment:
Q  159 aatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccggatg 249  Q
    |||||| ||| | |||||| ||||| || ||||| |||||||||| || |||| ||||||||||| ||||||||||||||||||| |||||    
T  36486589 aatgatgtatacaatctttattataaaccatatacatcatttaat-aatgaatataaaatattaatttttacttataataatgactggatg 36486678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 15660640 - 15660567
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaacggagagagta 75  Q
    ||||||||||||||||||||||||||||||       | || |||||||||| ||||||||||||||||||||||    
T  15660640 actttgaaagtgacagttaaataggaacaaaatatttc-tccaaaaatgacacttaaaaaggaacggagagagta 15660567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 243
Target Start/End: Complemental strand, 34953990 - 34953902
Alignment:
Q  155 aattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgac 243  Q
    |||||||||| |||  | ||||| |||||||| | ||| ||||||||||||| |||||||||||||| | |||| ||||||||| ||||    
T  34953990 aattaatgatgtatatggtctttattatagaccacatacatcatttaatgaatgaatttaaaatattgatttttgcttataatagtgac 34953902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 155 - 238
Target Start/End: Original strand, 42761499 - 42761582
Alignment:
Q  155 aattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataata 238  Q
    |||||||||| |||| ||||||| |||||||| ||||| ||||||||||||| ||||  ||||||  || |||| |||||||||    
T  42761499 aattaatgatgtatctgatctttattatagactatatacatcatttaatgaatgaatcaaaaataaaaagttttgcttataata 42761582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 3013674 - 3013748
Alignment:
Q  173 tctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    ||||| ||||| | |||||| ||||||||||||| |||| |||||| |||| |||| ||||||||| ||||||||    
T  3013674 tctttattataaataatatacatcatttaatgaatgaatgtaaaatgttaatttttgcttataatagtgaccgga 3013748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 1038136 - 1038071
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaacgg 67  Q
    ||||||||||||||||||||||||||||||       | ||||||| ||||||||||||||||||||    
T  1038136 actttgaaagtgacagttaaataggaacaaattttttc-tctaaaagtgacaattaaaaaggaacgg 1038071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 1045042 - 1044977
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaacgg 67  Q
    ||||||||||||||||||||||||||||||       | ||||||| ||||||||||||||||||||    
T  1045042 actttgaaagtgacagttaaataggaacaaattttttc-tctaaaagtgacaattaaaaaggaacgg 1044977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 37589661 - 37589730
Alignment:
Q  173 tctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatga 242  Q
    |||||||||||||| ||||| ||||| |||| || ||||||||||| || | ||||| ||||||||||||    
T  37589661 tctttgttatagaccatatacatcatctaataaaggaatttaaaatgttgatttttatttataataatga 37589730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 194 - 251
Target Start/End: Complemental strand, 46412758 - 46412701
Alignment:
Q  194 atcatttaatgaaagaatttaaaatattaaattttacttataataatgaccggatggt 251  Q
    ||||||||||||| |||| ||||||||||| |||| ||||||||| ||| ||||||||    
T  46412758 atcatttaatgaatgaatctaaaatattaatttttgcttataatagtgatcggatggt 46412701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 48083582 - 48083509
Alignment:
Q  171 gatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgacc 244  Q
    ||||||| |||||||| | ||| ||||||||||||| |||  ||||||||||| |||| ||||||||| |||||    
T  48083582 gatctttattatagaccacatacatcatttaatgaatgaacctaaaatattaatttttgcttataatagtgacc 48083509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 51613464 - 51613391
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaacggagagagta 75  Q
    ||||||||||||||||||||||||||||||       | ||||||| ||||||||||||||||| |||| |||||    
T  51613464 actttgaaagtgacagttaaataggaacaaaaattttc-tctaaaagtgacaattaaaaaggaatggagggagta 51613391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 43738701 - 43738609
Alignment:
Q  153 ttaattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccg 245  Q
    |||||||||||| |||  ||| ||| ||||| |  | ||||||||| ||||||| ||||||||||| |||| |||| ||||||||| ||||||    
T  43738701 ttaattaatgatgtatatgatttttattataaatcacatatatcatctaatgaatgaatttaaaatgttaatttttgcttataatagtgaccg 43738609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 5173510 - 5173444
Alignment:
Q  171 gatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataat 240  Q
    |||||||||||||||||||||||   ||||||| ||  |||||||||||| || ||||| ||||||||||    
T  5173510 gatctttgttatagacaatatat---atttaataaataaatttaaaatataaatttttatttataataat 5173444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 247
Target Start/End: Complemental strand, 34768348 - 34768281
Alignment:
Q  180 tatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    ||||||| ||||| |||||||| |||||||||||||||  | ||||||| |||| |||| ||||||||    
T  34768348 tatagactatatacatcatttattgaaagaatttaaaaagtgaaattttgcttacaatagtgaccgga 34768281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 26937937 - 26937875
Alignment:
Q  173 tctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttata 235  Q
    ||||| || ||||||||||| |||||||| |||| ||||||||||||| || |||| ||||||    
T  26937937 tctttattgtagacaatatacatcatttattgaatgaatttaaaatatgaatttttgcttata 26937875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 240
Target Start/End: Complemental strand, 34491253 - 34491207
Alignment:
Q  194 atcatttaatgaaagaatttaaaatattaaattttacttataataat 240  Q
    ||||||||||||| |||| |||||| ||||||||| |||||||||||    
T  34491253 atcatttaatgaatgaatctaaaatgttaaatttttcttataataat 34491207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 7783004 - 7782975
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  7783004 actttgaaagtgacagttaaataggaacaa 7782975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 8464633 - 8464662
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  8464633 actttgaaagtgacagttaaataggaacaa 8464662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 10675955 - 10675926
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  10675955 actttgaaagtgacagttaaataggaacaa 10675926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 13507823 - 13507794
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  13507823 actttgaaagtgacagttaaataggaacaa 13507794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 13515011 - 13514982
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  13515011 actttgaaagtgacagttaaataggaacaa 13514982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 30686464 - 30686435
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  30686464 actttgaaagtgacagttaaataggaacaa 30686435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 35483963 - 35483992
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  35483963 actttgaaagtgacagttaaataggaacaa 35483992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 35531479 - 35531508
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  35531479 actttgaaagtgacagttaaataggaacaa 35531508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 37437237 - 37437266
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  37437237 actttgaaagtgacagttaaataggaacaa 37437266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 37609311 - 37609278
Alignment:
Q  48 tgacaattaaaaaggaacggagagagtagtattt 81  Q
    ||||||||||||||||||||||| ||||||||||    
T  37609311 tgacaattaaaaaggaacggagatagtagtattt 37609278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 45226761 - 45226790
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  45226761 actttgaaagtgacagttaaataggaacaa 45226790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 1751164 - 1751112
Alignment:
Q  190 atatatcatttaatgaaagaatttaaaatattaaattttacttataataatga 242  Q
    |||||||||||||| ||  ||||||||||||||| |||||  |||||||||||    
T  1751164 atatatcatttaataaataaatttaaaatattaatttttatatataataatga 1751112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 155 - 243
Target Start/End: Complemental strand, 8397084 - 8396996
Alignment:
Q  155 aattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgac 243  Q
    ||||||||||||||   |||||| |||||||  | |||||||||||||| ||  ||||||||||||| | || |  |||||||||||||    
T  8397084 aattaatgatatatataatctttattatagatcacatatatcatttaataaataaatttaaaatattgatttctgtttataataatgac 8396996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 13043419 - 13043475
Alignment:
Q  188 atatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgacc 244  Q
    ||||| |||||| | |||| |||| ||||||||||| |||||||||||||| |||||    
T  13043419 atatacatcattaattgaatgaatctaaaatattaatttttacttataatagtgacc 13043475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 35151737 - 35151663
Alignment:
Q  173 tctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    ||||| |||||||  |||||||| |||||||||| |||| |||||||| ||||||||||||||||| ||||||||    
T  35151737 tctttattatagattatatatattatttaatgaatgaatctaaaatataaaattttacttataatagtgaccgga 35151663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 49231322 - 49231414
Alignment:
Q  153 ttaattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccg 245  Q
    ||||||||||||||||  ||||||| || ||||| | ||  ||||||||||||| |||| ||||||| ||| |||||||||||||| ||||||    
T  49231322 ttaattaatgatatatatgatctttattgtagaccacatgcatcatttaatgaatgaatctaaaatagtaacttttacttataatattgaccg 49231414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 24798189 - 24798262
Alignment:
Q  171 gatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgacc 244  Q
    ||||||| |||||||| |  || ||||||||||||| |||||||||||||||| |||| ||||||||| |||||    
T  24798189 gatctttattatagaccacgtacatcatttaatgaatgaatttaaaatattaatttttgcttataatagtgacc 24798262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 4406335 - 4406239
Alignment:
Q  155 aattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccggatggt 251  Q
    |||||||||| |||  | ||||| |||||||| | ||| |||||||||||||  ||| |||||| || | |||||||||||||| ||||||||||||    
T  4406335 aattaatgatgtatgtggtctttattatagaccacatacatcatttaatgaataaatctaaaatgttgatttttacttataatagtgaccggatggt 4406239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 248
Target Start/End: Original strand, 5816583 - 5816678
Alignment:
Q  153 ttaattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccggat 248  Q
    |||||||||||| |||  ||||||| |||||||  | ||||||||||||||||| |||| ||||||   || ||||| |||||||| |||||||||    
T  5816583 ttaattaatgatgtatatgatctttattatagatcacatatatcatttaatgaatgaatctaaaatgcaaagttttatttataatagtgaccggat 5816678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 47787005 - 47787064
Alignment:
Q  179 ttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataata 238  Q
    ||||| || ||||||||||||||||||| |||| |||||||| ||||||| |||||||||    
T  47787005 ttataaaccatatatatcatttaatgaatgaatataaaatataaaattttgcttataata 47787064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 52914062 - 52914133
Alignment:
Q  173 tctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgacc 244  Q
    ||||| |||||||| | ||| ||||||||||||| |||| ||||||||||| |||| ||||||||| |||||    
T  52914062 tctttattatagaccacatacatcatttaatgaatgaatctaaaatattaatttttgcttataatagtgacc 52914133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 12252156 - 12252082
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaacggagagagtag 76  Q
    ||||||||||||||||||||||||||||||       |||| |||| ||||| |||||||||||||||| ||||||    
T  12252156 actttgaaagtgacagttaaataggaacaaaaattttcttc-aaaagtgacacttaaaaaggaacggagggagtag 12252082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 55416361 - 55416295
Alignment:
Q  188 atatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccggatggtata 254  Q
    ||||| |||||| | |||| |||| | |||||| || ||||||||||||||||||||||||||||||    
T  55416361 atatacatcattaattgaatgaatctcaaatataaatttttacttataataatgaccggatggtata 55416295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 157 - 242
Target Start/End: Complemental strand, 12912701 - 12912616
Alignment:
Q  157 ttaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatga 242  Q
    ||||||| ||||  ||| ||| ||||| || ||||| |||||||||||||  ||| |||||| |||| ||||||||||||||||||    
T  12912701 ttaatgacatatatgatttttattatataccatatacatcatttaatgaataaatctaaaatgttaatttttacttataataatga 12912616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 25138747 - 25138820
Alignment:
Q  173 tctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgg 246  Q
    ||||| |||||||| |  ||||||||||||||||  ||| |||||||| ||||||| |||||||||| ||||||    
T  25138747 tctttattatagaccacgtatatcatttaatgaattaatctaaaatataaaattttgcttataataacgaccgg 25138820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 52677333 - 52677406
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaacggagagagta 75  Q
    ||||||||||||||||||||||||||||||       | ||||||| ||||| |||||||||||||||| |||||    
T  52677333 actttgaaagtgacagttaaataggaacaaaaaatttc-tctaaaagtgacacttaaaaaggaacggagggagta 52677406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 53599974 - 53600047
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaacggagagagta 75  Q
    ||||||||||||||||||||||||||||||       | || |||||||||| |||||||||||||||| |||||    
T  53599974 actttgaaagtgacagttaaataggaacaaaatttttc-tccaaaaatgacacttaaaaaggaacggagggagta 53600047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 247
Target Start/End: Original strand, 3511755 - 3511847
Alignment:
Q  155 aattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    |||||||||| |||  ||||||| |||||||| | ||  |||||||||||||  ||||||||||   || |||| ||||||||||||||||||    
T  3511755 aattaatgatgtatatgatctttattatagaccacattcatcatttaatgaataaatttaaaatgcaaagttttgcttataataatgaccgga 3511847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 247
Target Start/End: Complemental strand, 53176386 - 53176310
Alignment:
Q  171 gatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    ||||||| ||||| | || ||| ||||||||||||| |||| |||||| |||| |||||||||||||| ||| ||||    
T  53176386 gatcttttttataaataacatacatcatttaatgaatgaatataaaatgttaatttttacttataatagtgatcgga 53176310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 247
Target Start/End: Original strand, 19596077 - 19596136
Alignment:
Q  188 atatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    |||||||||||||| |||| ||||||||||||| ||| |||| |||||||| | ||||||    
T  19596077 atatatatcatttattgaatgaatttaaaatataaaactttatttataatagtaaccgga 19596136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 23004058 - 23003971
Alignment:
Q  153 ttaattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataat 240  Q
    |||||||||||| |||  ||||||| |||||||| | ||| || |||||||||| |||| |||||| |||| |||| |||||| ||||    
T  23004058 ttaattaatgatgtatatgatctttattatagactacatacattatttaatgaacgaatctaaaatgttaatttttgcttatagtaat 23003971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 245
Target Start/End: Original strand, 40814718 - 40814805
Alignment:
Q  158 taatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccg 245  Q
    |||||||||||  ||||||| ||||| || | ||||||||||||||||| |||| |||||| |||| ||||  |||||| | ||||||    
T  40814718 taatgatatatatgatctttattataaaccacatatatcatttaatgaatgaatctaaaatgttaatttttgtttataacagtgaccg 40814805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 2582896 - 2582946
Alignment:
Q  197 atttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    |||||||||| |||| |||||||||||  ||||||||||||| ||||||||    
T  2582896 atttaatgaatgaatctaaaatattaatatttacttataatagtgaccgga 2582946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 251
Target Start/End: Complemental strand, 26920748 - 26920670
Alignment:
Q  173 tctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccggatggt 251  Q
    ||||| |||||||| |  || ||||||||| ||| |||| |||||||  ||||||| ||||||||| ||||||||||||    
T  26920748 tctttattatagaccacgtacatcatttaacgaatgaatctaaaatacaaaattttgcttataatagtgaccggatggt 26920670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 36072634 - 36072704
Alignment:
Q  173 tctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgac 243  Q
    ||||| |||||||| | ||| ||||||||||||| |||||||||||   || |||||||||||||| ||||    
T  36072634 tctttattatagactacatacatcatttaatgaatgaatttaaaatgcaaagttttacttataatagtgac 36072704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 54931899 - 54931953
Alignment:
Q  189 tatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgac 243  Q
    |||| ||||||||||||| |||| |||||| |||| |||||||| ||||||||||    
T  54931899 tatacatcatttaatgaatgaatctaaaatgttaatttttacttgtaataatgac 54931953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 251
Target Start/End: Original strand, 55936051 - 55936129
Alignment:
Q  173 tctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccggatggt 251  Q
    ||||| |||| ||| | ||| ||||||||||||| |||| ||||||||| | |||| ||||||||| |||||| |||||    
T  55936051 tctttattatcgaccacatacatcatttaatgaatgaatctaaaatattgatttttgcttataatagtgaccgtatggt 55936129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 2582883 - 2582810
Alignment:
Q  174 ctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    |||| |||||||| | ||| |||||||||||||  ||| ||||||||| | |||| ||||||||||||| ||||    
T  2582883 ctttattatagactacatacatcatttaatgaatcaatctaaaatattgatttttgcttataataatgatcgga 2582810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 3436255 - 3436284
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  3436255 actttgaaagtgacagttaaataggaacaa 3436284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 4201506 - 4201535
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  4201506 actttgaaagtgacagttaaataggaacaa 4201535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 13629381 - 13629410
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  13629381 actttgaaagtgacagttaaataggaacaa 13629410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 19527396 - 19527425
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  19527396 actttgaaagtgacagttaaataggaacaa 19527425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 21044935 - 21044964
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  21044935 actttgaaagtgacagttaaataggaacaa 21044964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 21649411 - 21649362
Alignment:
Q  171 gatctttgttatagacaatatatatcatttaatgaaagaatttaaaatat 220  Q
    ||||||| |||||||| | |||||||||||||||||||||| ||| ||||    
T  21649411 gatctttattatagaccacatatatcatttaatgaaagaatctaatatat 21649362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 251
Target Start/End: Complemental strand, 23071461 - 23071404
Alignment:
Q  194 atcatttaatgaaagaatttaaaatattaaattttacttataataatgaccggatggt 251  Q
    |||||| |||||| |||| |||||||| || |||||||||||||  ||||||||||||    
T  23071461 atcattaaatgaatgaatctaaaatataaatttttacttataattgtgaccggatggt 23071404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 26620539 - 26620568
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  26620539 actttgaaagtgacagttaaataggaacaa 26620568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 27492415 - 27492386
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  27492415 actttgaaagtgacagttaaataggaacaa 27492386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 31862174 - 31862203
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  31862174 actttgaaagtgacagttaaataggaacaa 31862203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 238
Target Start/End: Original strand, 32599544 - 32599609
Alignment:
Q  173 tctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataata 238  Q
    ||||| ||||| || | ||| |||||||||| || |||| ||||||||||| ||||||||||||||    
T  32599544 tctttattataaaccacatacatcatttaataaatgaatctaaaatattaatttttacttataata 32599609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 33809143 - 33809070
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaacggagagagta 75  Q
    |||||||| |||||||||||||| ||||||       || | |||| ||||||||||||||||||||||||||||    
T  33809143 actttgaatgtgacagttaaataagaacaaaaattttctcc-aaaagtgacaattaaaaaggaacggagagagta 33809070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 36292643 - 36292602
Alignment:
Q  40 tctaaaaatgacaattaaaaaggaacggagagagtagtattt 81  Q
    ||||||| ||| |||||||||||||||||| |||||||||||    
T  36292643 tctaaaagtgagaattaaaaaggaacggagggagtagtattt 36292602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 44014101 - 44014130
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  44014101 actttgaaagtgacagttaaataggaacaa 44014130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 46871977 - 46871948
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  46871977 actttgaaagtgacagttaaataggaacaa 46871948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 48782256 - 48782227
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  48782256 actttgaaagtgacagttaaataggaacaa 48782227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 55934701 - 55934640
Alignment:
Q  188 atatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccggatg 249  Q
    ||||| ||||||||||||| |||| |||||| |||  |||| ||||||||| ||||||||||    
T  55934701 atatacatcatttaatgaatgaatctaaaatgttaggttttgcttataatagtgaccggatg 55934640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 56576291 - 56576320
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  56576291 actttgaaagtgacagttaaataggaacaa 56576320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 250
Target Start/End: Complemental strand, 2401095 - 2401039
Alignment:
Q  194 atcatttaatgaaagaatttaaaatattaaattttacttataataatgaccggatgg 250  Q
    |||||||| |||| ||||||||||  |||| |||| ||||||||||||||| |||||    
T  2401095 atcatttattgaatgaatttaaaaagttaacttttgcttataataatgaccagatgg 2401039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 3802175 - 3802143
Alignment:
Q  43 aaaaatgacaattaaaaaggaacggagagagta 75  Q
    ||||||||||||||||||||||||||| |||||    
T  3802175 aaaaatgacaattaaaaaggaacggagggagta 3802143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 4484120 - 4484208
Alignment:
Q  155 aattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgac 243  Q
    |||||||||| |||  | ||||| |||||||| | ||| |||||||||||||  ||| ||| |||  ||||||||||||||||| ||||    
T  4484120 aattaatgatgtatatggtctttattatagaccacatacatcatttaatgaacaaatctaatatacaaaattttacttataatagtgac 4484208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 24133644 - 24133732
Alignment:
Q  155 aattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgac 243  Q
    ||||||||||||||   |||||| ||||| || || || |||| ||||| || |||||||||||||||| ||||  |||||||| ||||    
T  24133644 aattaatgatatatataatctttattataaaccatgtacatcaattaataaatgaatttaaaatattaatttttgattataatagtgac 24133732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 24156224 - 24156276
Alignment:
Q  194 atcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgg 246  Q
    |||||||||| ||  ||| |||||| ||||||||| |||||||||||||||||    
T  24156224 atcatttaataaataaatctaaaatgttaaattttgcttataataatgaccgg 24156276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 46518845 - 46518782
Alignment:
Q  179 ttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgac 243  Q
    |||||||||||||||| ||||||||||| |||| |||||| || | |||| ||||||||| ||||    
T  46518845 ttatagacaatatataacatttaatgaatgaatctaaaatgttgactttt-cttataatattgac 46518782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 48806311 - 48806263
Alignment:
Q  194 atcatttaatgaaagaatttaaaatattaaattttacttataataatga 242  Q
    |||||||| ||||  || ||||||| |||||||||||||||||||||||    
T  48806311 atcatttattgaataaacttaaaatgttaaattttacttataataatga 48806263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 45473153 - 45473079
Alignment:
Q  173 tctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    ||||| |||||||||| ||| ||||||||||||| |||| |||||| |||| ||||| |||||||||||||||||    
T  45473153 tctttattatagacaacatacatcatttaatgaatgaatctaaaattttaatttttaattataataatgaccgga 45473079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 15916827 - 15916731
Alignment:
Q  155 aattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccggatggt 251  Q
    |||||||||| |||  |||||||||||||||| | ||| || |||||||||| |||| ||||||||| | |||| ||||||||| ||||| ||||||    
T  15916827 aattaatgatgtatatgatctttgttatagactacatacattatttaatgaatgaatctaaaatattgatttttgcttataatactgacctgatggt 15916731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 42530556 - 42530630
Alignment:
Q  173 tctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    ||||| |||||||||||||| ||| ||||||||| |||| |||||| |||| |||| ||||||||| ||||||||    
T  42530556 tctttattatagacaatatacatcgtttaatgaatgaatgtaaaatgttaatttttgcttataatagtgaccgga 42530630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 23377988 - 23378089
Alignment:
Q  155 aattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccggatggtata 254  Q
    |||||||||| |||  ||||||| || ||||  | ||| |||||||||| || |||| ||||||||||| |||| |||||||||||||||||| ||| ||    
T  23377988 aattaatgatgtatatgatctttattgtagatcacatacatcatttaataaatgaatctaaaatattaatttttgcttataataatgaccggagggtgta 23378087  T
Q  255 at 256  Q
    ||    
T  23378088 at 23378089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 800763 - 800822
Alignment:
Q  179 ttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataata 238  Q
    ||||| || ||||| ||||||||||||| ||||||||||| |||||||||| ||||||||    
T  800763 ttataaaccatatacatcatttaatgaatgaatttaaaatgttaaattttatttataata 800822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 1961353 - 1961451
Alignment:
Q  153 ttaattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccggatggt 251  Q
    |||||||||||| |||  | ||||| |||||||| | ||| ||||||||||||| |||| |||||| || | |||| ||||||||| ||||| ||||||    
T  1961353 ttaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtgacccgatggt 1961451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 15119853 - 15119781
Alignment:
Q  173 tctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccg 245  Q
    ||||| |||||||| | ||| ||||||||||||| |||| |||||| |||| |||| ||||||||| ||||||    
T  15119853 tctttattatagaccacatacatcatttaatgaatgaatctaaaatgttaatttttgcttataatagtgaccg 15119781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 32854970 - 32855046
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaacggagagagtagta 78  Q
    ||||||||||||||||||||||||||||||       | ||||||| ||||||||| ||| |||||||| ||||||||    
T  32854970 actttgaaagtgacagttaaataggaacaaaaaatttc-tctaaaagtgacaattataaatgaacggagggagtagta 32855046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 2012914 - 2012848
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaacgga 68  Q
    ||||||||||||||||||||||||||||||       | || |||||||||| |||||||||||||||    
T  2012914 actttgaaagtgacagttaaataggaacaaaaaatttc-tccaaaaatgacacttaaaaaggaacgga 2012848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 7079466 - 7079372
Alignment:
Q  153 ttaattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    |||||||||||| |||  | ||||  |||||||| | ||||||||||||||| | ||||||||||| || | |||| ||||||||| ||| ||||    
T  7079466 ttaattaatgatgtatatggtcttaattatagaccacatatatcatttaatggatgaatttaaaatgttgatttttgcttataatagtgatcgga 7079372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 247
Target Start/End: Original strand, 31101997 - 31102087
Alignment:
Q  157 ttaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    ||||||||||||  ||||||| ||||| || | ||| ||||||||||||| |||| ||||||   || |||| ||||||||||||| ||||    
T  31101997 ttaatgatatatatgatctttattataaaccacatacatcatttaatgaatgaatctaaaatgcaaacttttgcttataataatgatcgga 31102087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 38181815 - 38181765
Alignment:
Q  194 atcatttaatgaaagaatttaaaatattaaattttacttataataatgacc 244  Q
    ||||||||||||| |||| ||||||||| | |||| |||||||||||||||    
T  38181815 atcatttaatgaatgaatctaaaatattgatttttgcttataataatgacc 38181765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 188 - 242
Target Start/End: Complemental strand, 40591002 - 40590948
Alignment:
Q  188 atatatatcatttaatgaaagaatttaaaatattaaattttacttataataatga 242  Q
    |||||||||||| | |||| |||||||||||||||| ||||| ||||||| ||||    
T  40591002 atatatatcattaattgaatgaatttaaaatattaatttttatttataatgatga 40590948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 43077345 - 43077283
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaa 64  Q
    ||||||||||||||||||||||||||||||       |||| |||| |||||||||||||||||    
T  43077345 actttgaaagtgacagttaaataggaacaaaaaatttcttc-aaaagtgacaattaaaaaggaa 43077283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 479163 - 479192
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  479163 actttgaaagtgacagttaaataggaacaa 479192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 6013528 - 6013499
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  6013528 actttgaaagtgacagttaaataggaacaa 6013499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 10812252 - 10812223
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  10812252 actttgaaagtgacagttaaataggaacaa 10812223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 238
Target Start/End: Complemental strand, 11093606 - 11093541
Alignment:
Q  173 tctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataata 238  Q
    ||||| |||||||| | ||| |||||||||||||  ||| ||||||||| | ||||||||||||||    
T  11093606 tctttattatagaccacatacatcatttaatgaatcaatctaaaatattgatttttacttataata 11093541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 14295947 - 14295976
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  14295947 actttgaaagtgacagttaaataggaacaa 14295976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 15677481 - 15677510
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  15677481 actttgaaagtgacagttaaataggaacaa 15677510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 25187317 - 25187346
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  25187317 actttgaaagtgacagttaaataggaacaa 25187346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 27331835 - 27331790
Alignment:
Q  173 tctttgttatagacaatatatatcatttaatgaaagaatttaaaat 218  Q
    ||||| ||||| ||||||||||| |||||||||| |||||||||||    
T  27331835 tctttattataaacaatatatattatttaatgaatgaatttaaaat 27331790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 238
Target Start/End: Complemental strand, 33129150 - 33129085
Alignment:
Q  173 tctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataata 238  Q
    ||||| |||||||| | |||||| |||||||||| |||  ||||||||| | ||||||||||||||    
T  33129150 tctttattatagactacatatattatttaatgaatgaacctaaaatattgatttttacttataata 33129085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 37093503 - 37093474
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  37093503 actttgaaagtgacagttaaataggaacaa 37093474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 41885678 - 41885649
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  41885678 actttgaaagtgacagttaaataggaacaa 41885649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 155 - 247
Target Start/End: Complemental strand, 15859645 - 15859553
Alignment:
Q  155 aattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    |||||||||| |||  ||| ||| |||||||||| ||| || |||||||||| |||||| || | || | |||||||||||||| ||| ||||    
T  15859645 aattaatgatgtatatgatatttattatagacaacatacattatttaatgaatgaatttgaattgttgatttttacttataatagtgatcgga 15859553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 32143461 - 32143401
Alignment:
Q  194 atcatttaatgaaagaatttaaaatattaaattttacttataataatgaccggatggtata 254  Q
    |||||||||| || ||||||||||| | || |||| ||||||||| |||||||| ||||||    
T  32143461 atcatttaataaatgaatttaaaatgtaaagttttgcttataatagtgaccggagggtata 32143401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 155 - 235
Target Start/End: Original strand, 37195098 - 37195178
Alignment:
Q  155 aattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttata 235  Q
    |||||||||| |||  | ||||| |||||||| | ||| ||||||||||||||||||  |||||  ||| |||||||||||    
T  37195098 aattaatgatgtatatggtctttattatagaccacatacatcatttaatgaaagaatcaaaaatgataatttttacttata 37195178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 171 - 247
Target Start/End: Original strand, 40204505 - 40204581
Alignment:
Q  171 gatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    ||||||| |||||||  | ||| ||||||||||| | |||| |||||| |||| ||||||||||| || ||||||||    
T  40204505 gatctttattatagatcacatacatcatttaatgtaggaatctaaaatgttaatttttacttatattagtgaccgga 40204581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 155 - 247
Target Start/End: Original strand, 11795782 - 11795874
Alignment:
Q  155 aattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    |||||||||| |||  | ||||| |||||||| | ||||||||||||||||| ||||  |||||||| | |||| ||||||||||||||||||    
T  11795782 aattaatgatgtatatggtctttattatagaccacatatatcatttaatgaatgaataaaaaatattgatttttgcttataataatgaccgga 11795874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 33652897 - 33652838
Alignment:
Q  179 ttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataata 238  Q
    |||||||| ||||||||||||||||||| ||||  |||||||||| ||||| ||||||||    
T  33652897 ttatagaccatatatatcatttaatgaatgaataaaaaatattaatttttatttataata 33652838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 5144182 - 5144255
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaacggagagagta 75  Q
    ||||||||||||||| ||||||||||||||       || | ||||||||||||||||||||||||||| |||||    
T  5144182 actttgaaagtgacacttaaataggaacaaaaaatttctcc-aaaaatgacaattaaaaaggaacggagggagta 5144255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 5504452 - 5504379
Alignment:
Q  174 ctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    |||| |||||||| | ||| ||||||||||||| ||||||||||||  ||||||| ||||||||| || |||||    
T  5504452 ctttattatagaccaaatacatcatttaatgaatgaatttaaaatacaaaattttgcttataatagtgcccgga 5504379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 42394312 - 42394385
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaacggagagagta 75  Q
    ||||||||||||||||||||||||||||||       |||| |||| ||||| |||||||||||||||| |||||    
T  42394312 actttgaaagtgacagttaaataggaacaaaaaatttcttc-aaaagtgacacttaaaaaggaacggagggagta 42394385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 33075127 - 33075207
Alignment:
Q  171 gatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccggatggt 251  Q
    |||||||  ||||||| | ||| ||||||||||||| |||  ||||||||||| |||| ||||||||| ||||| ||||||    
T  33075127 gatctttactatagaccacatacatcatttaatgaatgaacctaaaatattaatttttgcttataatagtgaccagatggt 33075207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 249
Target Start/End: Original strand, 5777253 - 5777320
Alignment:
Q  182 tagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccggatg 249  Q
    ||||||| ||| |||||||| |||| |||| |||||||| || ||||||||||| | |||||||||||    
T  5777253 tagacaacatacatcatttattgaatgaatgtaaaatatgaatttttacttatatttatgaccggatg 5777320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 4175664 - 4175742
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaacggagagagtagtatt 80  Q
    ||||||||||||||||||||||||||||||       | || |||| ||||| |||||||||||||||| ||||| ||||    
T  4175664 actttgaaagtgacagttaaataggaacaaaaattttc-tccaaaagtgacacttaaaaaggaacggagggagtactatt 4175742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 6754363 - 6754392
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  6754363 actttgaaagtgacagttaaataggaacaa 6754392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 9076106 - 9076077
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  9076106 actttgaaagtgacagttaaataggaacaa 9076077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 12664893 - 12664864
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  12664893 actttgaaagtgacagttaaataggaacaa 12664864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 12784626 - 12784655
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  12784626 actttgaaagtgacagttaaataggaacaa 12784655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 12870083 - 12870112
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  12870083 actttgaaagtgacagttaaataggaacaa 12870112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 21606442 - 21606471
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  21606442 actttgaaagtgacagttaaataggaacaa 21606471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 28024443 - 28024472
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  28024443 actttgaaagtgacagttaaataggaacaa 28024472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 32440096 - 32440125
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  32440096 actttgaaagtgacagttaaataggaacaa 32440125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 38017461 - 38017490
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  38017461 actttgaaagtgacagttaaataggaacaa 38017490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 38363226 - 38363197
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  38363226 actttgaaagtgacagttaaataggaacaa 38363197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 38370483 - 38370418
Alignment:
Q  153 ttaattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaat 218  Q
    |||||||||||| |||  ||||||| |||||||| | ||| ||||||||||||| |||| ||||||    
T  38370483 ttaattaatgatgtatatgatctttattatagactacatacatcatttaatgaacgaatctaaaat 38370418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 250
Target Start/End: Original strand, 7604302 - 7604330
Alignment:
Q  222 aaattttacttataataatgaccggatgg 250  Q
    |||||||||||||||||||||||||||||    
T  7604302 aaattttacttataataatgaccggatgg 7604330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 22650932 - 22650860
Alignment:
Q  173 tctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccg 245  Q
    ||||| |||||||| | ||| |||||||||| || |||| |||||||  ||||||| ||||||||||| ||||    
T  22650932 tctttattatagaccacatacatcatttaataaatgaatctaaaatacaaaattttgcttataataataaccg 22650860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 245
Target Start/End: Complemental strand, 30371385 - 30371337
Alignment:
Q  197 atttaatgaaagaatttaaaatattaaattttacttataataatgaccg 245  Q
    ||||||| || |||| |||||| |||| |||||||||||||||||||||    
T  30371385 atttaataaatgaatctaaaatgttaatttttacttataataatgaccg 30371337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 30780160 - 30780068
Alignment:
Q  159 aatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccggatggt 251  Q
    |||||| ||| || ||||| || ||||||| ||| |||||||| ||||  |||||||||||| || |||| |||||| | || ||||||||||    
T  30780160 aatgatgtatgcggtctttattgtagacaacatacatcatttattgaataaatttaaaatatgaatttttgcttatatttataaccggatggt 30780068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 24669 - 24744
Alignment:
Q  172 atctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    |||||| |||||||| | ||| ||||||||||||| |||| ||||||||||| |||| ||||||||| ||||||||    
T  24669 atctttattatagaccacatacatcatttaatgaatgaatctaaaatattaatttttgcttataatagtgaccgga 24744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 2296550 - 2296476
Alignment:
Q  173 tctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    ||||| |||||||| ||||| ||||||||||||| |||| |||||| | ||||||| ||||||||||||| ||||    
T  2296550 tctttattatagaccatatacatcatttaatgaatgaatctaaaatgtaaaattttgcttataataatgatcgga 2296476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 26062761 - 26062688
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaacggagagagta 75  Q
    |||| |||||||||||||||||||||||||        |||||||||||||| ||||||||||||||||||||||    
T  26062761 acttcgaaagtgacagttaaataggaacaaaaaaatt-ttctaaaaatgacacttaaaaaggaacggagagagta 26062688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 1897933 - 1897860
Alignment:
Q  174 ctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    |||| |||||||||| ||| || ||||||||||  ||| ||||||||| | |||| ||||||||||||||||||    
T  1897933 ctttattatagacaacatacattatttaatgaataaatataaaatattgatttttgcttataataatgaccgga 1897860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 3720733 - 3720660
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaacggagagagta 75  Q
    ||||||||||||||||||||||||||||||        ||| |||| |||||||||||||||||||||| |||||    
T  3720733 actttgaaagtgacagttaaataggaacaaaaaatttattc-aaaagtgacaattaaaaaggaacggagggagta 3720660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 155 - 244
Target Start/End: Complemental strand, 5888430 - 5888341
Alignment:
Q  155 aattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgacc 244  Q
    |||||||||| |||  | ||||| |||||||||| ||| ||||||||||||| |||| |||||  |||| |||| ||||||||| |||||    
T  5888430 aattaatgatgtatatggtctttattatagacaacatacatcatttaatgaatgaatctaaaacgttaatttttgcttataatagtgacc 5888341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 14700311 - 14700384
Alignment:
Q  179 ttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccggatggta 252  Q
    |||||||| | ||| || ||||||| || |||| |||||||  ||||||||||||||||| |||||||||||||    
T  14700311 ttatagaccacatacattatttaataaatgaatctaaaatacaaaattttacttataatagtgaccggatggta 14700384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 27518894 - 27518967
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaacggagagagta 75  Q
    ||||||||||||||||||||||||||||||       |||| ||||  |||| ||||||||||||||||||||||    
T  27518894 actttgaaagtgacagttaaataggaacaaaaaatttcttc-aaaagagacacttaaaaaggaacggagagagta 27518967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 38221828 - 38221787
Alignment:
Q  40 tctaaaaatgacaattaaaaaggaacggagagagtagtattt 81  Q
    ||||||||||||| |||||||| |||||||||||||||||||    
T  38221828 tctaaaaatgacacttaaaaagaaacggagagagtagtattt 38221787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 41753828 - 41753763
Alignment:
Q  179 ttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgacc 244  Q
    |||||||| | ||| ||||||||||||| ||||||||||| || |||||| ||||||||| |||||    
T  41753828 ttatagaccacatacatcatttaatgaatgaatttaaaatgttgaattttgcttataatagtgacc 41753763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 2805891 - 2805819
Alignment:
Q  171 gatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgac 243  Q
    ||||||| |||||||| | |||||||||||||| || ||||  ||||| | ||||||| ||||||||||||||    
T  2805891 gatctttattatagaccacatatatcatttaataaatgaatccaaaatgtaaaattttgcttataataatgac 2805819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 3225826 - 3225922
Alignment:
Q  155 aattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccggatggt 251  Q
    |||||||||| |||  ||||||| |||||||| | ||| ||||||||||||| |||   |||||||| | |||| |||||||||||||  |||||||    
T  3225826 aattaatgatgtatatgatctttattatagaccacatacatcatttaatgaatgaaccaaaaatattgatttttgcttataataatgattggatggt 3225922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 2335486 - 2335411
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaacggagagagtagt 77  Q
    ||||||||||||||||||||||||||||||       | || |||||||||| |||||||||||||||  |||||||    
T  2335486 actttgaaagtgacagttaaataggaacaaaaaatttc-tccaaaaatgacacttaaaaaggaacggatggagtagt 2335411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 6750668 - 6750605
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaac 65  Q
    ||||||||||||||||||||||||||||||       | || |||||||||||||||||||||||    
T  6750668 actttgaaagtgacagttaaataggaacaaaaaatttc-tccaaaaatgacaattaaaaaggaac 6750605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 6757459 - 6757396
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaac 65  Q
    ||||||||||||||||||||||||||||||       | || |||||||||||||||||||||||    
T  6757459 actttgaaagtgacagttaaataggaacaaaaaatttc-tccaaaaatgacaattaaaaaggaac 6757396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 8731014 - 8731088
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaacggagagagtag 76  Q
    ||||||||||||||||||||||||||||||       | || |||||||||| ||| |||||||||||| ||||||    
T  8731014 actttgaaagtgacagttaaataggaacaaaaaatttc-tccaaaaatgacacttagaaaggaacggagggagtag 8731088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 24287861 - 24287787
Alignment:
Q  173 tctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    ||||| |||||||| ||||| ||||||||||||| |||| ||||||   || |||| ||||||||| ||||||||    
T  24287861 tctttattatagaccatatacatcatttaatgaatgaatctaaaatgcaaagttttgcttataatagtgaccgga 24287787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 4057341 - 4057312
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  4057341 actttgaaagtgacagttaaataggaacaa 4057312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 13290105 - 13290154
Alignment:
Q  179 ttatagacaatatatatcatttaatgaaagaatttaaaatattaaatttt 228  Q
    |||||||| | ||||||||||||||||| |||| ||||||||||| ||||    
T  13290105 ttatagaccacatatatcatttaatgaatgaatctaaaatattaattttt 13290154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 17718556 - 17718527
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  17718556 actttgaaagtgacagttaaataggaacaa 17718527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 23429962 - 23429933
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  23429962 actttgaaagtgacagttaaataggaacaa 23429933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 247
Target Start/End: Complemental strand, 27502956 - 27502903
Alignment:
Q  194 atcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    ||||||||||||| ||||||||||| |||| |||| ||||||||| ||| ||||    
T  27502956 atcatttaatgaatgaatttaaaatgttaatttttgcttataatagtgatcgga 27502903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 238
Target Start/End: Complemental strand, 29360824 - 29360759
Alignment:
Q  173 tctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataata 238  Q
    |||||||||||||  ||||| ||||||||||||| |||| |||||||  || |||| |||||||||    
T  29360824 tctttgttatagatcatatacatcatttaatgaatgaatctaaaatacaaagtttttcttataata 29360759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 33935247 - 33935276
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  33935247 actttgaaagtgacagttaaataggaacaa 33935276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 35296097 - 35296068
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  35296097 actttgaaagtgacagttaaataggaacaa 35296068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 38482979 - 38483008
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  38482979 actttgaaagtgacagttaaataggaacaa 38483008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 40228348 - 40228319
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  40228348 actttgaaagtgacagttaaataggaacaa 40228319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 7484681 - 7484753
Alignment:
Q  173 tctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccg 245  Q
    ||||| |||| ||| | ||| ||||||||||||| |||| |||||| || | |||| ||||||||||||||||    
T  7484681 tctttattatcgaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataataatgaccg 7484753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 14061377 - 14061409
Alignment:
Q  43 aaaaatgacaattaaaaaggaacggagagagta 75  Q
    |||||||||| ||||||||||||||||||||||    
T  14061377 aaaaatgacacttaaaaaggaacggagagagta 14061409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 14700302 - 14700246
Alignment:
Q  188 atatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgacc 244  Q
    |||||||||||  |||||| |||| |||||||  ||||||||||||||||| |||||    
T  14700302 atatatatcatcaaatgaatgaatctaaaatacaaaattttacttataatagtgacc 14700246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 44319579 - 44319523
Alignment:
Q  191 tatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    ||||||||||||| || |||| |||||| |||| |||| ||||||||| ||||||||    
T  44319579 tatatcatttaataaatgaatctaaaatgttaacttttgcttataatagtgaccgga 44319523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 124
Target Start/End: Complemental strand, 45045512 - 45045480
Alignment:
Q  92 gatcattattataaacaaaaatctatattttag 124  Q
    ||||| |||||||||||||||||||||||||||    
T  45045512 gatcactattataaacaaaaatctatattttag 45045480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 18819990 - 18819937
Alignment:
Q  190 atatatcatttaatgaaagaatttaaaatattaaattttacttataataatgac 243  Q
    |||||||||||| |||||||||| ||||||| || |||||||||||||||||||    
T  18819990 atatatcatttattgaaagaattcaaaatatgaacttttacttataataatgac 18819937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 242
Target Start/End: Original strand, 18819981 - 18820064
Alignment:
Q  159 aatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatga 242  Q
    ||||||||||   ||||||  ||||||||| ||| |||||||| |||| |||| |||||| ||||||||||||| |||||||||    
T  18819981 aatgatatatgtaatctttaatatagacaacatacatcatttattgaatgaatctaaaatgttaaattttacttgtaataatga 18820064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 245
Target Start/End: Complemental strand, 23797442 - 23797352
Alignment:
Q  155 aattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccg 245  Q
    |||||||||| |||| | ||||| |||||||| | ||| ||||||||||||| |||| ||||||   ||||||| ||||||||| ||||||    
T  23797442 aattaatgatgtatctggtctttattatagactacatacatcatttaatgaatgaatctaaaatgcaaaattttgcttataatagtgaccg 23797352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 42842056 - 42842122
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaacgga 68  Q
    ||||||||||||||||||||||||||||||       | ||||||| |||||||||||||||||||||    
T  42842056 actttgaaagtgacagttaaataggaacaaaaaatttc-tctaaaagtgacaattaaaaaggaacgga 42842122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 242
Target Start/End: Original strand, 46384431 - 46384485
Alignment:
Q  188 atatatatcatttaatgaaagaatttaaaatattaaattttacttataataatga 242  Q
    |||||||| |||||||||| ||||||||||||| || |||| |||||||||||||    
T  46384431 atatatataatttaatgaatgaatttaaaatatgaatttttgcttataataatga 46384485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 21096283 - 21096196
Alignment:
Q  153 ttaattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataat 240  Q
    |||||||||||| |||  ||| ||| |||||||  | |||||| ||||||||||  ||| ||||||||||| |||| |||||||||||    
T  21096283 ttaattaatgatgtatatgatatttattatagatcacatatattatttaatgaataaatctaaaatattaatttttgcttataataat 21096196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 251
Target Start/End: Complemental strand, 23818501 - 23818422
Alignment:
Q  172 atctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccggatggt 251  Q
    |||||| |||||||  ||||| ||||||||||||| |||| |||||| || | |||| ||||||||| |||| |||||||    
T  23818501 atctttattatagattatatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtgactggatggt 23818422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 8265000 - 8264934
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaacgga 68  Q
    ||||||||||||||||||||||||||||||       | ||||||| ||||| |||||||||||||||    
T  8265000 actttgaaagtgacagttaaataggaacaaaaattttc-tctaaaagtgacacttaaaaaggaacgga 8264934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 181 - 247
Target Start/End: Complemental strand, 10095787 - 10095721
Alignment:
Q  181 atagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    |||||| | ||| ||||||||||||| |||| |||||| |||| |||| ||||||||| ||||||||    
T  10095787 atagaccacatacatcatttaatgaatgaatctaaaatgttaatttttgcttataatagtgaccgga 10095721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 26477257 - 26477167
Alignment:
Q  153 ttaattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgac 243  Q
    |||||||||||| |||  |||||||  |||| || ||||| | |||||||| ||  ||| ||||||||||| |||||||||||||| ||||    
T  26477257 ttaattaatgatgtatatgatctttaatataaaccatatacaccatttaataaataaatctaaaatattaatttttacttataatagtgac 26477167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 26553697 - 26553607
Alignment:
Q  153 ttaattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgac 243  Q
    |||||||||||| |||  |||||||  |||| || ||||| | |||||||| ||  ||| ||||||||||| |||||||||||||| ||||    
T  26553697 ttaattaatgatgtatatgatctttaatataaaccatatacaccatttaataaataaatctaaaatattaatttttacttataatagtgac 26553607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 32528518 - 32528592
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaacggagagagtag 76  Q
    ||||||||||||||||||||||||||||||       |||| |||| | ||| ||||||| |||||||||||||||    
T  32528518 actttgaaagtgacagttaaataggaacaaaaattttcttc-aaaagtaacacttaaaaaagaacggagagagtag 32528592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 247
Target Start/End: Original strand, 9555345 - 9555398
Alignment:
Q  194 atcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    ||||||||||||| |||| |||||| | || |||| ||||||||||||||||||    
T  9555345 atcatttaatgaatgaatctaaaatgtaaagttttgcttataataatgaccgga 9555398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 17896713 - 17896742
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  17896713 actttgaaagtgacagttaaataggaacaa 17896742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 254
Target Start/End: Original strand, 22281868 - 22281949
Alignment:
Q  173 tctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccggatggtata 254  Q
    ||||| |||||||  | ||| |||||||||||||  ||| |||||||  || |||| |||||||||||||||||| ||||||    
T  22281868 tctttattatagagcacatacatcatttaatgaataaatctaaaatacaaagttttgcttataataatgaccggagggtata 22281949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 249
Target Start/End: Original strand, 26982829 - 26982866
Alignment:
Q  212 ttaaaatattaaattttacttataataatgaccggatg 249  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  26982829 ttaaaatgtgaaattttacttataataatgaccggatg 26982866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 30866926 - 30866955
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  30866926 actttgaaagtgacagttaaataggaacaa 30866955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 31430612 - 31430583
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  31430612 actttgaaagtgacagttaaataggaacaa 31430583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 31814703 - 31814760
Alignment:
Q  179 ttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataa 236  Q
    |||||||  |||||||||||||||| || |||||||||||||| | |||| |||||||    
T  31814703 ttatagatcatatatatcatttaataaatgaatttaaaatatttatttttgcttataa 31814760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 33100023 - 33100052
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  33100023 actttgaaagtgacagttaaataggaacaa 33100052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 33173860 - 33173831
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  33173860 actttgaaagtgacagttaaataggaacaa 33173831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 251
Target Start/End: Complemental strand, 39013031 - 39012974
Alignment:
Q  194 atcatttaatgaaagaatttaaaatattaaattttacttataataatgaccggatggt 251  Q
    |||| |||||||| |||||||||||||||| |||| ||||||||| | | ||||||||    
T  39013031 atcacttaatgaatgaatttaaaatattaatttttgcttataatagtaatcggatggt 39012974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 39429943 - 39429906
Alignment:
Q  44 aaaatgacaattaaaaaggaacggagagagtagtattt 81  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  39429943 aaaatgacacttaaaaatgaacggagagagtagtattt 39429906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 41891323 - 41891294
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  41891323 actttgaaagtgacagttaaataggaacaa 41891294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 247
Target Start/End: Complemental strand, 43103127 - 43103074
Alignment:
Q  194 atcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    |||||||||| || ||||||||||| |||| |||| ||||||||| ||||||||    
T  43103127 atcatttaataaatgaatttaaaatgttaatttttgcttataatagtgaccgga 43103074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 155 - 247
Target Start/End: Complemental strand, 4089223 - 4089131
Alignment:
Q  155 aattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    |||||||||| |||  | ||||| |||||||  ||||| ||||||||||||| |||| ||||||||| | ||||  |||||||| | ||||||    
T  4089223 aattaatgatgtatatggtctttattatagaacatatacatcatttaatgaatgaatataaaatattgatttttgtttataatagtaaccgga 4089131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 9555326 - 9555258
Alignment:
Q  183 agacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccggatggt 251  Q
    |||| ||||| |||||| | ||||  |||||||||| | ||||||||||||| ||| ||||||||||||    
T  9555326 agactatatacatcattaattgaataaatttaaaatgtaaaattttacttatgatagtgaccggatggt 9555258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 28752160 - 28752208
Alignment:
Q  190 atatatcatttaatgaaagaatttaaaatattaaattttacttataata 238  Q
    ||||||||||||||||| |||| ||||| ||||| |||| |||||||||    
T  28752160 atatatcatttaatgaatgaatgtaaaaaattaatttttgcttataata 28752208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 33921964 - 33921992
Alignment:
Q  1 actttgaaagtgacagttaaataggaaca 29  Q
    |||||||||||||||||||||||||||||    
T  33921964 actttgaaagtgacagttaaataggaaca 33921992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 48981611 - 48981643
Alignment:
Q  43 aaaaatgacaattaaaaaggaacggagagagta 75  Q
    |||| ||||||||||||||||||||||||||||    
T  48981611 aaaagtgacaattaaaaaggaacggagagagta 48981643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 18886383 - 18886314
Alignment:
Q  174 ctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgac 243  Q
    |||| |||||||| | ||||||||||||||||| |||| ||||||||||| |||| ||||||||| ||||    
T  18886383 ctttattatagaccacatatatcatttaatgaatgaatctaaaatattaatttttgcttataatagtgac 18886314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 24356242 - 24356315
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaacggagagagta 75  Q
    ||||||||||||||||||||||||||||||       | ||||||| |||||||||||||||||||||| |||||    
T  24356242 actttgaaagtgacagttaaataggaacaataaatttc-tctaaaagtgacaattaaaaaggaacggagggagta 24356315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 15517154 - 15517226
Alignment:
Q  173 tctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccg 245  Q
    ||||| |||||||| | ||| ||||||||||||| |||| ||||||||| | |||| ||||||||||||||||    
T  15517154 tctttattatagaccacatacatcatttaatgaatgaatctaaaatattgatttttgcttataataatgaccg 15517226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 155 - 238
Target Start/End: Original strand, 13281580 - 13281663
Alignment:
Q  155 aattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataata 238  Q
    |||||||||| |||  ||||||| |||||| | | ||| |||||||||| || |||| ||||||||| ||||||||||||||||    
T  13281580 aattaatgatgtatatgatctttcttatagtccacatacatcatttaatcaatgaatctaaaatattgaattttacttataata 13281663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 31244937 - 31245010
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaacggagagagta 75  Q
    |||||||||||||||||||||||  |||||       || |||||||||||||||||||| ||||||||||||||    
T  31244937 actttgaaagtgacagttaaatacaaacaaaaaatttct-ctaaaaatgacaattaaaaatgaacggagagagta 31245010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 12218539 - 12218456
Alignment:
Q  155 aattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataata 238  Q
    |||||||||| |||  ||||||| |||||||  | ||||||||||||||||| |||| |||||| || | |||| |||||||||    
T  12218539 aattaatgatgtataagatctttattatagattacatatatcatttaatgaatgaatataaaatgttgatttttgcttataata 12218456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 23923901 - 23923980
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaaggaacggagagagtagtattt 81  Q
    ||||||||||||||||||||||||||||||       | || |||| ||||| |||||||||||||||| ||||| |||||    
T  23923901 actttgaaagtgacagttaaataggaacaaaaaatctc-tccaaaagtgacacttaaaaaggaacggagggagtaatattt 23923980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 12480133 - 12480067
Alignment:
Q  188 atatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccggatggtata 254  Q
    ||||| ||||||||| |||  ||| |||||| || | |||||||||||||||| |||||||||||||    
T  12480133 atatacatcatttaacgaataaatctaaaatgttgatttttacttataataataaccggatggtata 12480067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 13506878 - 13506975
Alignment:
Q  153 ttaattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccggatggt 251  Q
    |||||||||||| |||  ||||||| |||||||| | ||  |||||||||||||  |||||||||| || | |||| |||||||||||||  |||||||    
T  13506878 ttaattaatgatgtatatgatctttattatagactagatgcatcatttaatgaataaatttaaaatgtt-atttttgcttataataatgataggatggt 13506975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 3849118 - 3849089
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  3849118 actttgaaagtgacagttaaataggaacaa 3849089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 8176489 - 8176460
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  8176489 actttgaaagtgacagttaaataggaacaa 8176460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 12732229 - 12732200
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  12732229 actttgaaagtgacagttaaataggaacaa 12732200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 31133193 - 31133242
Alignment:
Q  191 tatatcatttaatgaaagaatttaaaatattaaattttacttataataat 240  Q
    |||||||||||||||| |||| ||||||||||  |||| |||||||||||    
T  31133193 tatatcatttaatgaatgaatctaaaatattagtttttgcttataataat 31133242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 247
Target Start/End: Original strand, 32254906 - 32254959
Alignment:
Q  194 atcatttaatgaaagaatttaaaatattaaattttacttataataatgaccgga 247  Q
    ||||||||||||| |||| ||||||||||| |||| ||||||||| ||| ||||    
T  32254906 atcatttaatgaatgaatctaaaatattaacttttgcttataatagtgatcgga 32254959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 33260753 - 33260724
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  33260753 actttgaaagtgacagttaaataggaacaa 33260724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 17214263 - 17214199
Alignment:
Q  181 atagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatgaccg 245  Q
    |||||| | |||| ||||||||||||  ||||||||| ||| | ||||| |||||||||||||||    
T  17214263 atagaccacatatgtcatttaatgaataaatttaaaaaattgatttttaattataataatgaccg 17214199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 29419872 - 29419920
Alignment:
Q  194 atcatttaatgaaagaatttaaaatattaaattttacttataataatga 242  Q
    ||||||||||||| |||| |||||| || | ||||||||||||||||||    
T  29419872 atcatttaatgaatgaatctaaaatgttgatttttacttataataatga 29419920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 155 - 242
Target Start/End: Complemental strand, 89692 - 89605
Alignment:
Q  155 aattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatga 242  Q
    |||||||||| |||  ||||||| |||||||  | ||| |||||||||||||||||| |||||| || | |||| |||||||||||||    
T  89692 aattaatgatgtatatgatctttattatagatcacatacatcatttaatgaaagaatctaaaatgttgatttttgcttataataatga 89605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 7477 - 7417
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaannnnnnncttctaaaaatgacaattaaaaagg 62  Q
    ||||||||||||||||||||||||||||||       | |||||||||||||||||||||||    
T  7477 actttgaaagtgacagttaaataggaacaaaaaatttc-tctaaaaatgacaattaaaaagg 7417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 39173 - 39241
Alignment:
Q  173 tctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataataatg 241  Q
    ||||| |||||||| ||||| ||||||||||||| |||| |||||| || | |||| ||||||||||||    
T  39173 tctttattatagaccatatacatcatttaatgaatgaatctaaaattttgatttttgcttataataatg 39241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 236
Target Start/End: Original strand, 216317 - 216400
Alignment:
Q  153 ttaattaatgatatatccgatctttgttatagacaatatatatcatttaatgaaagaatttaaaatattaaattttacttataa 236  Q
    ||||||||||||  ||  ||||||| ||||| || | ||| |||||||||||||  |||||||||| ||||||||| |||||||    
T  216317 ttaattaatgatgcatatgatctttattataaacgacatacatcatttaatgaattaatttaaaatgttaaattttgcttataa 216400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 49200 - 49171
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  49200 actttgaaagtgacagttaaataggaacaa 49171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 77141 - 77112
Alignment:
Q  1 actttgaaagtgacagttaaataggaacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  77141 actttgaaagtgacagttaaataggaacaa 77112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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