View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18361_low_25 (Length: 269)
Name: NF18361_low_25
Description: NF18361
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18361_low_25 |
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Alignment Details
Target: chr2 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 33969332 - 33969587
Alignment:
| Q |
1 |
tatcttcaattcctgttgatgatgattcttctgttgcttctgtggctccaccttctccggagttggaggatgacaatgtttcttatttcatcaaaaaggt |
100 |
Q |
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| T |
33969332 |
tatcttcaattcctgttgatgatgattcttctgttgcttctgtggctccaccttctccggagttggaggatgacaatgtttcttatttcatcaaaaaggt |
33969431 |
T |
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| Q |
101 |
aactaaggagattaaatttgtgtggtgcatgttaataatttatgttgcaacttgcaatttgcaatggtaattaggttttagttgaagttttaacagtggt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33969432 |
aactaaggagattaaatttgtgtggtgcatgttaataatttatgttgcaacttgcaatttgcaatggtaattaggttttagttgaagttttaacagtggt |
33969531 |
T |
|
| Q |
201 |
tttagtgttaatctgtttcnnnnnnnngtattttatattctggttcttgaatgatga |
257 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
33969532 |
tttagtgttaatctgtttc-tttttttgtattttatattctggttcttgaatgatga |
33969587 |
T |
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