View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18362_high_6 (Length: 318)
Name: NF18362_high_6
Description: NF18362
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18362_high_6 |
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Alignment Details
Target: chr5 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 6 - 304
Target Start/End: Original strand, 12286806 - 12287104
Alignment:
| Q |
6 |
cacagacctcatcagattctaaaattgaaaatgacactttaacttgaaaaaatgttcatttaactttgctaactaattaaaaatatcaaacaaattcatt |
105 |
Q |
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| T |
12286806 |
cacaggcctcatcagattctaaaattgaaaatgacactttaacttgaaaaaatgttcatttaactttgctaactaattaaaaatatcaaacaaattcttt |
12286905 |
T |
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| Q |
106 |
aatcacaaaattcaatgcattattaaatttgtttctaaaaaataattgaattttaagtaaaacttatactgtgttcttaattaaaacatcttagttagta |
205 |
Q |
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| T |
12286906 |
aatcacaacattcaatgcattattaaatttgtttctaaaaaataattgaattttaagtaaaacttatactgtgttcttaattaaaacatcttagttagta |
12287005 |
T |
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| Q |
206 |
acatcattaacatctattaatgaaaccagtgaactgaactccaaatttaggccttagattaggtagaactaactaataccgttaggtgatgatttaatt |
304 |
Q |
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| T |
12287006 |
acatcattaacatctattaatcaaaccagtgaactgaactccaaatttaggccttagattaggtagaactaactaataccgttaggtgatgatttaatt |
12287104 |
T |
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