View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18363_high_7 (Length: 322)
Name: NF18363_high_7
Description: NF18363
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18363_high_7 |
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Alignment Details
Target: chr5 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 18 - 311
Target Start/End: Original strand, 22837184 - 22837477
Alignment:
| Q |
18 |
tgtcttacctccaagactttaatgtctctggtaacaacctctctggtagagtacctgaattactttcgggttttcctgattcatcttttgctcaaaaccc |
117 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22837184 |
tgtcttacctccaagacttcaatgtctctggtaacaacctctctggtagagtacctgaattactttcgggttttcctgattcatcttttgctcaaaaccc |
22837283 |
T |
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| Q |
118 |
gtctttatgtggtgctccattgcaaaaatgtaaagacgttcctgcccttgcttcgtcgttggttccatcttcttcgagtataatgtcgagaaacaagact |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
22837284 |
gtctttatgtggtgctccattgcaaaaatgtaaagacgttcctgcccttgcttcatcgttggttccatcttcttcaagtataatgtcgagaaacaagact |
22837383 |
T |
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| Q |
218 |
aatagaaatggtggtccaagaatggggactttggtgttaatcgccattatcctcggcgatgtattagtactcgcagttgtctcattgcttctct |
311 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22837384 |
catagaaatggtggtccaagaatggggactttggttttaatcgccattatcctcggcgatgtattagtactcgcagttgtctcattgcttctct |
22837477 |
T |
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