View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18367_high_4 (Length: 614)

Name: NF18367_high_4
Description: NF18367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18367_high_4
NF18367_high_4
[»] chr8 (37 HSPs)
chr8 (1-596)||(5266395-5266985)
chr8 (404-462)||(9209886-9209944)
chr8 (401-463)||(18957883-18957945)
chr8 (404-465)||(43489893-43489954)
chr8 (401-465)||(42304792-42304856)
chr8 (401-463)||(4030493-4030555)
chr8 (404-462)||(4302163-4302221)
chr8 (404-462)||(4656052-4656110)
chr8 (404-462)||(7149010-7149068)
chr8 (404-462)||(9458483-9458541)
chr8 (404-462)||(10795427-10795485)
chr8 (401-463)||(14781297-14781359)
chr8 (401-463)||(16365260-16365322)
chr8 (401-463)||(18305126-18305188)
chr8 (401-463)||(19717030-19717092)
chr8 (401-463)||(20831129-20831191)
chr8 (404-462)||(39371217-39371275)
chr8 (405-463)||(40012348-40012406)
chr8 (404-462)||(40264327-40264385)
chr8 (401-463)||(44724946-44725008)
chr8 (405-462)||(2113764-2113821)
chr8 (404-465)||(43604427-43604488)
chr8 (405-465)||(41964650-41964710)
chr8 (405-456)||(14062474-14062525)
chr8 (401-463)||(7467390-7467452)
chr8 (401-463)||(31626283-31626345)
chr8 (405-463)||(35143061-35143119)
chr8 (401-463)||(39466683-39466745)
chr8 (404-462)||(41385922-41385980)
chr8 (404-462)||(42275920-42275978)
chr8 (404-456)||(1605852-1605904)
chr8 (417-465)||(34134739-34134787)
chr8 (401-456)||(43307703-43307758)
chr8 (401-463)||(32498874-32498936)
chr8 (409-465)||(10294564-10294620)
chr8 (401-463)||(37857861-37857921)
chr8 (404-456)||(28620666-28620718)
[»] scaffold0054 (1 HSPs)
scaffold0054 (401-463)||(36450-36512)
[»] chr7 (36 HSPs)
chr7 (404-462)||(27417700-27417758)
chr7 (400-463)||(3023908-3023971)
chr7 (401-463)||(510629-510691)
chr7 (404-462)||(12252438-12252496)
chr7 (401-463)||(12741356-12741418)
chr7 (401-463)||(23102274-23102336)
chr7 (401-463)||(28343293-28343355)
chr7 (401-463)||(29893939-29894001)
chr7 (404-462)||(43056740-43056798)
chr7 (401-462)||(29613954-29614015)
chr7 (404-461)||(47912576-47912633)
chr7 (404-462)||(152837-152895)
chr7 (401-463)||(7994139-7994201)
chr7 (401-463)||(9881449-9881511)
chr7 (398-456)||(12893156-12893214)
chr7 (401-463)||(18839277-18839339)
chr7 (404-454)||(30111777-30111827)
chr7 (401-463)||(32884736-32884798)
chr7 (404-462)||(35089149-35089207)
chr7 (406-463)||(33891401-33891458)
chr7 (401-453)||(28034289-28034341)
chr7 (401-453)||(30823580-30823632)
chr7 (404-456)||(34114593-34114645)
chr7 (401-465)||(37971555-37971619)
chr7 (404-456)||(42677299-42677351)
chr7 (400-456)||(46035498-46035554)
chr7 (406-456)||(26183084-26183134)
chr7 (404-462)||(33475513-33475571)
chr7 (401-463)||(37328809-37328871)
chr7 (401-463)||(39785079-39785141)
chr7 (406-461)||(33383626-33383681)
chr7 (406-465)||(44255946-44256005)
chr7 (404-463)||(48136414-48136473)
chr7 (404-462)||(40098230-40098288)
chr7 (401-464)||(40459883-40459945)
chr7 (405-453)||(46197158-46197206)
[»] chr3 (46 HSPs)
chr3 (401-463)||(52617136-52617198)
chr3 (404-465)||(23367390-23367451)
chr3 (398-463)||(39039059-39039124)
chr3 (401-463)||(18750616-18750678)
chr3 (404-462)||(23360553-23360611)
chr3 (401-463)||(23752553-23752615)
chr3 (404-462)||(24149889-24149947)
chr3 (404-462)||(26556843-26556901)
chr3 (404-462)||(30589821-30589879)
chr3 (401-463)||(31645413-31645475)
chr3 (401-463)||(34483254-34483316)
chr3 (404-462)||(36054062-36054120)
chr3 (401-463)||(36673309-36673371)
chr3 (401-463)||(44905006-44905068)
chr3 (401-463)||(45254604-45254666)
chr3 (404-462)||(46223358-46223416)
chr3 (398-463)||(17947201-17947266)
chr3 (405-462)||(34290220-34290277)
chr3 (402-463)||(52811364-52811425)
chr3 (404-456)||(45214136-45214188)
chr3 (407-462)||(2124760-2124815)
chr3 (401-456)||(50902471-50902526)
chr3 (401-463)||(10728176-10728238)
chr3 (401-463)||(11432530-11432592)
chr3 (404-454)||(14978528-14978578)
chr3 (404-462)||(19551205-19551263)
chr3 (404-462)||(23697947-23698005)
chr3 (404-462)||(23716402-23716460)
chr3 (404-462)||(23734858-23734916)
chr3 (401-463)||(39841605-39841667)
chr3 (404-462)||(44040953-44041011)
chr3 (401-463)||(50761273-50761335)
chr3 (404-462)||(50899498-50899556)
chr3 (405-463)||(50902514-50902572)
chr3 (401-463)||(51736917-51736979)
chr3 (401-463)||(54629833-54629895)
chr3 (398-463)||(48380123-48380188)
chr3 (404-463)||(24573485-24573544)
chr3 (407-462)||(38628875-38628930)
chr3 (401-456)||(44707927-44707982)
chr3 (401-463)||(10661170-10661232)
chr3 (404-454)||(23754529-23754579)
chr3 (404-462)||(26292616-26292673)
chr3 (404-456)||(36786901-36786950)
chr3 (401-462)||(20833882-20833943)
chr3 (404-456)||(46251251-46251303)
[»] chr2 (25 HSPs)
chr2 (404-462)||(38821303-38821361)
chr2 (404-465)||(7487009-7487070)
chr2 (401-463)||(13832718-13832780)
chr2 (401-463)||(18178255-18178317)
chr2 (404-462)||(20156633-20156691)
chr2 (401-463)||(25289138-25289200)
chr2 (401-463)||(26789768-26789830)
chr2 (404-462)||(29941865-29941923)
chr2 (401-465)||(3464568-3464632)
chr2 (401-456)||(43079473-43079528)
chr2 (404-454)||(6288608-6288658)
chr2 (401-463)||(28845561-28845623)
chr2 (401-463)||(33136577-33136639)
chr2 (404-462)||(34027829-34027887)
chr2 (404-462)||(45547891-45547949)
chr2 (401-462)||(7027889-7027950)
chr2 (404-456)||(2289266-2289318)
chr2 (398-453)||(10658423-10658478)
chr2 (404-456)||(27979879-27979931)
chr2 (404-456)||(28066409-28066461)
chr2 (404-462)||(36599197-36599255)
chr2 (406-456)||(45497494-45497544)
chr2 (406-456)||(45505236-45505286)
chr2 (406-463)||(28739186-28739243)
chr2 (404-456)||(43023508-43023560)
[»] chr1 (28 HSPs)
chr1 (401-463)||(28386608-28386670)
chr1 (404-465)||(51826013-51826074)
chr1 (405-465)||(39758856-39758916)
chr1 (405-465)||(39764210-39764270)
chr1 (400-463)||(45273544-45273607)
chr1 (404-462)||(1923421-1923479)
chr1 (401-463)||(6313559-6313621)
chr1 (401-463)||(9321669-9321731)
chr1 (404-462)||(14389398-14389456)
chr1 (401-463)||(20111731-20111793)
chr1 (401-463)||(25613075-25613137)
chr1 (401-463)||(29220095-29220157)
chr1 (401-463)||(29395587-29395649)
chr1 (401-463)||(51702577-51702639)
chr1 (404-462)||(52706364-52706422)
chr1 (405-462)||(28038388-28038445)
chr1 (401-456)||(48198937-48198992)
chr1 (401-456)||(48207520-48207575)
chr1 (401-463)||(5494307-5494369)
chr1 (404-454)||(19894808-19894858)
chr1 (404-462)||(26881868-26881926)
chr1 (404-462)||(45319451-45319509)
chr1 (401-463)||(49231967-49232029)
chr1 (400-463)||(46328949-46329012)
chr1 (404-462)||(45535733-45535791)
chr1 (407-465)||(4289865-4289923)
chr1 (401-463)||(38535306-38535368)
chr1 (401-463)||(38557524-38557586)
[»] chr6 (15 HSPs)
chr6 (398-463)||(4199634-4199699)
chr6 (403-454)||(10262853-10262904)
chr6 (404-462)||(3109402-3109460)
chr6 (404-462)||(6475795-6475853)
chr6 (401-463)||(14261600-14261662)
chr6 (404-462)||(29864804-29864862)
chr6 (401-463)||(30384221-30384283)
chr6 (405-456)||(5958037-5958088)
chr6 (401-456)||(7104514-7104569)
chr6 (401-456)||(8790061-8790116)
chr6 (401-456)||(27585234-27585289)
chr6 (401-463)||(7498073-7498135)
chr6 (401-463)||(31068403-31068465)
chr6 (401-463)||(31896620-31896682)
chr6 (401-463)||(34774368-34774430)
[»] scaffold0237 (1 HSPs)
scaffold0237 (404-462)||(20499-20557)
[»] scaffold0153 (1 HSPs)
scaffold0153 (404-462)||(33877-33935)
[»] scaffold0016 (1 HSPs)
scaffold0016 (404-462)||(80845-80903)
[»] chr5 (20 HSPs)
chr5 (401-463)||(1459345-1459407)
chr5 (404-462)||(10553712-10553770)
chr5 (401-463)||(13717078-13717140)
chr5 (401-463)||(13999264-13999326)
chr5 (401-463)||(40012867-40012929)
chr5 (404-462)||(40411393-40411451)
chr5 (401-463)||(1151449-1151511)
chr5 (404-462)||(3603512-3603570)
chr5 (401-463)||(4239630-4239692)
chr5 (401-463)||(4549415-4549477)
chr5 (401-463)||(7947183-7947245)
chr5 (404-454)||(10553491-10553541)
chr5 (404-454)||(11632738-11632788)
chr5 (401-463)||(13926915-13926977)
chr5 (404-462)||(13949853-13949911)
chr5 (405-463)||(39853335-39853393)
chr5 (407-462)||(17519493-17519548)
chr5 (398-463)||(5950101-5950166)
chr5 (404-456)||(2275321-2275373)
chr5 (408-465)||(32827897-32827954)
[»] chr4 (30 HSPs)
chr4 (404-462)||(8583053-8583111)
chr4 (401-463)||(27769047-27769109)
chr4 (401-463)||(32683184-32683246)
chr4 (401-463)||(54342130-54342192)
chr4 (404-465)||(7808971-7809032)
chr4 (401-465)||(49834022-49834086)
chr4 (401-463)||(5442376-5442436)
chr4 (404-462)||(3434879-3434937)
chr4 (405-463)||(5801688-5801746)
chr4 (404-462)||(7820925-7820983)
chr4 (401-463)||(23988180-23988242)
chr4 (401-463)||(29649179-29649241)
chr4 (401-463)||(32323052-32323114)
chr4 (404-454)||(42315866-42315916)
chr4 (401-463)||(48262058-48262120)
chr4 (401-463)||(50019174-50019236)
chr4 (401-456)||(38234593-38234648)
chr4 (405-456)||(53272829-53272880)
chr4 (404-462)||(16654157-16654215)
chr4 (401-463)||(30966234-30966296)
chr4 (401-463)||(37827585-37827647)
chr4 (401-463)||(41726089-41726151)
chr4 (404-462)||(42217500-42217557)
chr4 (401-463)||(48531970-48532032)
chr4 (401-463)||(49500689-49500751)
chr4 (401-463)||(51321839-51321901)
chr4 (402-463)||(28484855-28484916)
chr4 (404-456)||(52110242-52110294)
chr4 (401-462)||(37916776-37916842)
chr4 (404-450)||(44647710-44647756)
[»] scaffold0042 (1 HSPs)
scaffold0042 (402-463)||(57220-57281)
[»] scaffold0472 (1 HSPs)
scaffold0472 (404-456)||(990-1042)
[»] scaffold0940 (1 HSPs)
scaffold0940 (401-463)||(3623-3685)
[»] scaffold0839 (1 HSPs)
scaffold0839 (401-463)||(3163-3225)
[»] scaffold1521 (1 HSPs)
scaffold1521 (398-463)||(1339-1404)
[»] scaffold0383 (1 HSPs)
scaffold0383 (398-463)||(16194-16259)
[»] scaffold0152 (2 HSPs)
scaffold0152 (398-463)||(20421-20486)
scaffold0152 (398-463)||(29315-29380)
[»] scaffold0110 (1 HSPs)
scaffold0110 (400-463)||(38796-38864)


Alignment Details
Target: chr8 (Bit Score: 429; Significance: 0; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 429; E-Value: 0
Query Start/End: Original strand, 1 - 596
Target Start/End: Original strand, 5266395 - 5266985
Alignment:
Q  1 aaagacttatatgatagtattattagagtattttaattgcaatgactattttgtttaatgaattatgcaatcttaggactcttctgaaattttgacatga 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||   ||||||||||||||  | ||||||||||||||||    
T  5266395 aaagacttatatgatagtattattagagtattt-aatttcaatgactattttgtttaatgaat---gcaatcttaggactgctttgaaattttgacatga 5266490  T
Q  101 attactgtttactcgttatatatttatgagcgaaaatggttatttgtctattttttaaatgacaagtattagctaaactcaaaccaatcaagtatcttca 200  Q
    |||| ||||||||||||||| |||||||| |||||||  ||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||| ||||    
T  5266491 attattgtttactcgttatacatttatgaacgaaaataattatttgcctattttttaaatgacaagtgttagctaaaatcaaaccaatcaagtattttca 5266590  T
Q  201 aatcttgatcacttaaatctatgggtaaccgaatctatttaatttaggtccaatcaaaaccaacacattcaaacccaaagtagtttggttcatatgacga 300  Q
    |||||| ||||||| | ||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  5266591 aatcttcatcacttgagtctatgggtgaccgaatgtatttaatttaggtccaataaaaaccaacacattcaaacccaaagtagtttggttcatataacga 5266690  T
Q  301 atttatcatttcaactcggaaatccacatcgttcnnnnnnntagttaagggaatgtattggattatgatttaaaaaatttatttcagcnnnnnnnnntct 400  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||         |||    
T  5266691 atttatcatttcaactcggaaatccacatcgttcaaaaaaatagttaagggaatgtattggattatgatttaaaaaatttatttcagc-aaaaaaaatct 5266789  T
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaatttttacatttataactatgtagagtgtcatagtctttttcat 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5266790 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaatttttacatttataactatgtagagtgtcatagtctttttcat 5266889  T
Q  501 ataaactagtgggttaattcgaccaaaagacgttaagtggatgctgtcaaagtacgaagactaatcatagtaaagacatgaataccatacaactaa 596  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5266890 ataaactagtgggttaattcgatcaaaagacgttatgtggatgctgtcaaagtacgaagactaatcatagtcaagacatgaataccatacaactaa 5266985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 9209944 - 9209886
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||    
T  9209944 aagattttaaaagattttgtgagattatattgattttgttggattttaaaagacttttt 9209886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 18957883 - 18957945
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||||||||||    
T  18957883 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagaattttta 18957945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 404 - 465
Target Start/End: Complemental strand, 43489954 - 43489893
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaatttttaca 465  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| ||||||||    
T  43489954 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaagactttttaca 43489893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 401 - 465
Target Start/End: Original strand, 42304792 - 42304856
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaatttttaca 465  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||| ||| ||||    
T  42304792 tttaagattttaaaagactgtgtgagattgtattgattttgtgagattttaaaagactttataca 42304856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 4030493 - 4030555
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  4030493 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 4030555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 4302163 - 4302221
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    |||||||||||||| |||||||||||||||||| ||||| ||||||||||||| |||||    
T  4302163 aagattttaaaagattttgtgagattatattgactttgttggattttaaaagacttttt 4302221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 4656110 - 4656052
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  4656110 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaagacttttt 4656052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 7149068 - 7149010
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  7149068 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaagacttttt 7149010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 9458541 - 9458483
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  9458541 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaagacttttt 9458483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 10795427 - 10795485
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  10795427 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaagacttttt 10795485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 14781297 - 14781359
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  14781297 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 14781359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 16365322 - 16365260
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    |||||||||||||||||||||||| |||| |||||||| |||| |||||||||||| ||||||    
T  16365322 tttaagattttaaaagactttgtgcgattgtattgattctgtgagattttaaaagacttttta 16365260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 18305126 - 18305188
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  18305126 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 18305188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 19717030 - 19717092
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  19717030 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 19717092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 20831129 - 20831191
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  20831129 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagatttttta 20831191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 39371217 - 39371275
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  39371217 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaagacttttt 39371275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 405 - 463
Target Start/End: Original strand, 40012348 - 40012406
Alignment:
Q  405 agattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||| ||||||||||| ||| ||||||||| |||||||||||||||||||    
T  40012348 agattttaaaagagtttgtgagattgtatcgattttgtgagattttaaaagaattttta 40012406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 40264327 - 40264385
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  40264327 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaagacttttt 40264385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 44724946 - 44725008
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  44724946 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 44725008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 2113821 - 2113764
Alignment:
Q  405 agattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    |||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  2113821 agattttaaaagactttgttggattgtattgattttgtgggattttaaaagacttttt 2113764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 404 - 465
Target Start/End: Original strand, 43604427 - 43604488
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaatttttaca 465  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||| | ||||||||    
T  43604427 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaaaactttttaca 43604488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 405 - 465
Target Start/End: Original strand, 41964650 - 41964710
Alignment:
Q  405 agattttaaaagactttgtgagattatattgattttgtgggattttaaaagaatttttaca 465  Q
    ||||||||||| |||||||   |||||||||||||||||||||||||||||| ||||||||    
T  41964650 agattttaaaaaactttgttgaattatattgattttgtgggattttaaaagactttttaca 41964710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 405 - 456
Target Start/End: Complemental strand, 14062525 - 14062474
Alignment:
Q  405 agattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    |||||||||||||||||||| |||| |||||||||| |||||||||||||||    
T  14062525 agattttaaaagactttgtgtgattctattgattttatgggattttaaaaga 14062474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 7467452 - 7467390
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| || ||||||||| ||||||    
T  7467452 tttaagattttaaaagactgtgtgagattgtattgattctgtgagaatttaaaagacttttta 7467390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 31626345 - 31626283
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||| | ||||||||| |||||||| |||| |||||||||||| ||||||    
T  31626345 tttaagattttaaaagattgtgtgagattgtattgattctgtgagattttaaaagacttttta 31626283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 405 - 463
Target Start/End: Complemental strand, 35143119 - 35143061
Alignment:
Q  405 agattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||| ||| ||||| ||||||||||||| |||||||||||| ||||||    
T  35143119 agattttaaaagactctgtaagattgtattgattttgtgagattttaaaagacttttta 35143061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 39466683 - 39466745
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||| ||| |||||||| |||| |||||||||||| ||||||    
T  39466683 tttaagattttaaaagactctgtgatattgtattgattctgtgagattttaaaagacttttta 39466745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 41385922 - 41385980
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||| ||||||||||||||||||||| |||||    
T  41385922 aagattttaaaagactttgttggattgtattaattttgtgggattttaaaagacttttt 41385980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 42275978 - 42275920
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||| ||||||||||| |||||    
T  42275978 aagattttaaaagactttgttggattgtattgattttgtggaattttaaaagacttttt 42275920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 456
Target Start/End: Original strand, 1605852 - 1605904
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    |||||||||||||||||||   |||| ||||||||||||||||||||||||||    
T  1605852 aagattttaaaagactttgcaggattgtattgattttgtgggattttaaaaga 1605904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 417 - 465
Target Start/End: Original strand, 34134739 - 34134787
Alignment:
Q  417 actttgtgagattatattgattttgtgggattttaaaagaatttttaca 465  Q
    |||||||||||||||||||||||| || |||||||||||| ||||||||    
T  34134739 actttgtgagattatattgattttatgagattttaaaagactttttaca 34134787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 401 - 456
Target Start/End: Original strand, 43307703 - 43307758
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    ||||||||||||||||||| |||||||||  ||||||| |||| ||||||||||||    
T  43307703 tttaagattttaaaagactgtgtgagattggattgattctgtgagattttaaaaga 43307758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 32498936 - 32498874
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |  | |||||||||||| ||||||    
T  32498936 tttaagattttaaaagactgtgtgagattgtattgattctaagagattttaaaagacttttta 32498874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 10294564 - 10294620
Alignment:
Q  409 tttaaaagactttgtgagattatattgattttgtgggattttaaaagaatttttaca 465  Q
    ||||||||||| ||||||||| |||||||| |||| |||||||||||| ||| ||||    
T  10294564 tttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttataca 10294620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 37857921 - 37857861
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||  ||||| |||||||| |||| |||||||||||| ||||||    
T  37857921 tttaagattttaaaagactatg--agattgtattgattctgtgagattttaaaagacttttta 37857861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 404 - 456
Target Start/End: Complemental strand, 28620718 - 28620666
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    |||||||||||| | |||||| |||| |||||||||| || ||||||||||||    
T  28620718 aagattttaaaaaattttgtgtgattgtattgattttttgagattttaaaaga 28620666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 36450 - 36512
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||| ||||||    
T  36450 tttaagattttaaaagactgtgtgagattatattgattctgtgagattttaaaagacttttta 36512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 2e-17; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 27417700 - 27417758
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||    
T  27417700 aagattttaaaagactttgttagattgtattgattttgtgggattttaaaagacttttt 27417758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 400 - 463
Target Start/End: Complemental strand, 3023971 - 3023908
Alignment:
Q  400 ttttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    |||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  3023971 ttttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 3023908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 510691 - 510629
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  510691 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 510629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 12252438 - 12252496
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  12252438 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaagacttttt 12252496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 12741418 - 12741356
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  12741418 tttaagattttaaaagactgtgtgagattgtattgattatgtgagattttaaaagacttttta 12741356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 23102336 - 23102274
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  23102336 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 23102274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 28343355 - 28343293
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  28343355 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 28343293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 29894001 - 29893939
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||| | ||||||||| ||||||||||||| |||||||||||| ||||||    
T  29894001 tttaagattttaaaagattgtgtgagattgtattgattttgtgagattttaaaagacttttta 29893939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 43056740 - 43056798
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  43056740 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaagacttttt 43056798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 401 - 462
Target Start/End: Original strand, 29613954 - 29614015
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| |||||    
T  29613954 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttt 29614015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 404 - 461
Target Start/End: Original strand, 47912576 - 47912633
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaatttt 461  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| ||||    
T  47912576 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaagactttt 47912633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 152895 - 152837
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||| ||||||||||||| |||||    
T  152895 aagattttaaaagactttgttggattgtattgattttgtaggattttaaaagacttttt 152837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 7994201 - 7994139
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||  |||||||||||| ||||||    
T  7994201 tttaagattttaaaagactgtgtgagattgtattgattctgtaagattttaaaagacttttta 7994139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 9881449 - 9881511
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| | || |||||||||||| ||||||    
T  9881449 tttaagattttaaaagactgtgtgagattgtattgattctatgagattttaaaagacttttta 9881511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 398 - 456
Target Start/End: Original strand, 12893156 - 12893214
Alignment:
Q  398 tcttttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    |||||||| ||||||||||||||||||||||| |||||||| | || ||||||||||||    
T  12893156 tcttttaaaattttaaaagactttgtgagattgtattgattctatgagattttaaaaga 12893214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 18839339 - 18839277
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||| | ||||||||| |||||||| |||| |||||||||||| ||||||    
T  18839339 tttaagattttaaaagattgtgtgagattgtattgattctgtgagattttaaaagacttttta 18839277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 454
Target Start/End: Complemental strand, 30111827 - 30111777
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaa 454  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||||||||    
T  30111827 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaa 30111777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 32884798 - 32884736
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||| ||| |||||||| |||| |||||||||||| ||||||    
T  32884798 tttaagattttaaaagactgtgtgaaattgtattgattctgtgagattttaaaagacttttta 32884736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 35089149 - 35089207
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| ||||||||||||| |||||||||||| |||||    
T  35089149 aagattttaaaagactttgttggattgtattgattttgtgagattttaaaagacttttt 35089207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 406 - 463
Target Start/End: Original strand, 33891401 - 33891458
Alignment:
Q  406 gattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    |||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  33891401 gattttaaaagactatgtgagattgtattgattctgtgagattttaaaagacttttta 33891458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 453
Target Start/End: Original strand, 28034289 - 28034341
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaa 453  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||| |||||||||    
T  28034289 tttaaaattttaaaagactgtgtgagattgtattgattttgtgagattttaaa 28034341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 453
Target Start/End: Complemental strand, 30823632 - 30823580
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaa 453  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||    
T  30823632 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaa 30823580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 456
Target Start/End: Original strand, 34114593 - 34114645
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    ||||||||||||||||||||| |||| |||||||||||  |||||||||||||    
T  34114593 aagattttaaaagactttgtgtgattgtattgattttgaaggattttaaaaga 34114645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 465
Target Start/End: Original strand, 37971555 - 37971619
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaatttttaca 465  Q
    ||||||||||||||||||  ||||||||| |||||||| |||| |||||||||||| ||| ||||    
T  37971555 tttaagattttaaaagaccgtgtgagattgtattgattctgtgagattttaaaagactttataca 37971619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 456
Target Start/End: Original strand, 42677299 - 42677351
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    |||||||||||||| |||||| |||| |||||||||||||| |||||||||||    
T  42677299 aagattttaaaagattttgtgtgattgtattgattttgtggaattttaaaaga 42677351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 456
Target Start/End: Original strand, 46035498 - 46035554
Alignment:
Q  400 ttttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    |||||||||||||||||||||||||  ||| |||||||| |||| ||||||||||||    
T  46035498 ttttaagattttaaaagactttgtggaattgtattgattctgtgagattttaaaaga 46035554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 456
Target Start/End: Complemental strand, 26183134 - 26183084
Alignment:
Q  406 gattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    ||||||||||||||||||| |||| |||||||| |||| ||||||||||||    
T  26183134 gattttaaaagactttgtgggattgtattgattatgtgagattttaaaaga 26183084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 33475571 - 33475513
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||  ||||||||||| |||||    
T  33475571 aagattttaaaagactttgttggattgtattgattttgtgaaattttaaaagacttttt 33475513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 37328871 - 37328809
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    |||||||||| ||| |||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  37328871 tttaagatttaaaaggactgtgtgagattgtattgattctgtgagattttaaaagacttttta 37328809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 39785141 - 39785079
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| || |||||| |||||||| ||||  ||||||||||| ||||||    
T  39785141 tttaagattttaaaagactgtgcgagattgtattgattctgtgaaattttaaaagacttttta 39785079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 461
Target Start/End: Complemental strand, 33383681 - 33383626
Alignment:
Q  406 gattttaaaagactttgtgagattatattgattttgtgggattttaaaagaatttt 461  Q
    |||||||||||||| ||| ||||| |||||||| |||| |||||||||||| ||||    
T  33383681 gattttaaaagactgtgtaagattgtattgattctgtgagattttaaaagactttt 33383626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 465
Target Start/End: Original strand, 44255946 - 44256005
Alignment:
Q  406 gattttaaaagactttgtgagattatattgattttgtgggattttaaaagaatttttaca 465  Q
    |||||||||||||| ||||||||| |||||||| | || |||||||||||| ||| ||||    
T  44255946 gattttaaaagactgtgtgagattgtattgattctctgagattttaaaagactttataca 44256005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 463
Target Start/End: Original strand, 48136414 - 48136473
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    |||||||||||| | | ||||||||| |||||||| |||| |||||||||||| ||||||    
T  48136414 aagattttaaaatattgtgtgagattgtattgattctgtgagattttaaaagacttttta 48136473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 40098288 - 40098230
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    |||||||||||||| ||||| |||||||||||| ||| | | ||||||||||| |||||    
T  40098288 aagattttaaaagattttgtaagattatattgactttcttgaattttaaaagacttttt 40098230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 464
Target Start/End: Original strand, 40459883 - 40459945
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatatt-gattttgtgggattttaaaagaatttttac 464  Q
    |||||||||||||||||||  |||||||| |||| |||| |||| |||||||||||| |||||||    
T  40459883 tttaagattttaaaagact--gtgagattgtatttgattctgtgagattttaaaagactttttac 40459945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 46197158 - 46197206
Alignment:
Q  405 agattttaaaagactttgtgagattatattgattttgtgggattttaaa 453  Q
    ||||||||||||||||| ||| |||||||||||||| | | ||||||||    
T  46197158 agattttaaaagactttatgaaattatattgattttatagaattttaaa 46197206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 2e-17; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 52617136 - 52617198
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||||||||||||| |||||||| |||| |||||||||||| ||||||    
T  52617136 tttaagattttaaaagactttgtgagattgtattgattctgtgagattttaaaagacttttta 52617198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 404 - 465
Target Start/End: Complemental strand, 23367451 - 23367390
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaatttttaca 465  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| ||||||||    
T  23367451 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaagactttttaca 23367390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 398 - 463
Target Start/End: Complemental strand, 39039124 - 39039059
Alignment:
Q  398 tcttttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||| |||||||||||||| |||||||| |||| |||||||||||| ||||||    
T  39039124 tcttttaagattttaaatgactttgtgagattgtattgattctgtgagattttaaaagacttttta 39039059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 18750678 - 18750616
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  18750678 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 18750616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 23360611 - 23360553
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  23360611 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaagacttttt 23360553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 23752553 - 23752615
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  23752553 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 23752615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 24149889 - 24149947
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||| ||||||||  ||||||||||||||||||||||||||||||| |||||    
T  24149889 aagattttaaatgactttgttggattatattgattttgtgggattttaaaagacttttt 24149947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 26556901 - 26556843
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  26556901 aagattttaaaagactttgttcgattgtattgattttgtgggattttaaaagacttttt 26556843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 30589879 - 30589821
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  30589879 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaagacttttt 30589821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 31645413 - 31645475
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  31645413 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 31645475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 34483254 - 34483316
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  34483254 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 34483316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 36054062 - 36054120
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  36054062 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaagacttttt 36054120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 36673309 - 36673371
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  36673309 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 36673371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 44905006 - 44905068
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  44905006 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 44905068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 45254604 - 45254666
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  45254604 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 45254666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 46223358 - 46223416
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  46223358 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaagacttttt 46223416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 398 - 463
Target Start/End: Complemental strand, 17947266 - 17947201
Alignment:
Q  398 tcttttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    |||||||| ||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  17947266 tcttttaaaattttaaaagactatgtgagattgtattgattctgtgagattttaaaagacttttta 17947201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 34290220 - 34290277
Alignment:
Q  405 agattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    |||||||||||||||||||| |||| |||||||||| ||||||||||||||| |||||    
T  34290220 agattttaaaagactttgtgtgattgtattgattttatgggattttaaaagacttttt 34290277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 402 - 463
Target Start/End: Complemental strand, 52811425 - 52811364
Alignment:
Q  402 ttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    |||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  52811425 ttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagatttttta 52811364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 404 - 456
Target Start/End: Original strand, 45214136 - 45214188
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    ||||||||||||||||||||| |||| ||||||||||||| ||||||||||||    
T  45214136 aagattttaaaagactttgtgtgattgtattgattttgtgagattttaaaaga 45214188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 407 - 462
Target Start/End: Original strand, 2124760 - 2124815
Alignment:
Q  407 attttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    |||||||||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  2124760 attttaaaagactttgttggattgtattgattttgtgggattttaaaagacttttt 2124815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 401 - 456
Target Start/End: Original strand, 50902471 - 50902526
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| ||||||||||||    
T  50902471 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaaga 50902526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 10728176 - 10728238
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||| | ||||||||| |||||||| |||| |||||||||||| ||||||    
T  10728176 tttaagattttaaaagaatgtgtgagattgtattgattctgtgagattttaaaagacttttta 10728238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 11432592 - 11432530
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||| ||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  11432592 tttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 11432530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 454
Target Start/End: Complemental strand, 14978578 - 14978528
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaa 454  Q
    |||||||||||||||||||| |||||||||||| ||||| |||||||||||    
T  14978578 aagattttaaaagactttgtaagattatattgactttgttggattttaaaa 14978528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 19551205 - 19551263
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    |||||||||||||||||| |  |||| |||||||||||||||||||||||||| |||||    
T  19551205 aagattttaaaagactttattggattgtattgattttgtgggattttaaaagatttttt 19551263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 23698005 - 23697947
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||| |||||| |||||    
T  23698005 aagattttaaaagactttgttggattgtattgattttgtgggatttcaaaagacttttt 23697947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 23716460 - 23716402
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||| |||||| |||||    
T  23716460 aagattttaaaagactttgttggattgtattgattttgtgggatttcaaaagacttttt 23716402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 23734916 - 23734858
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||| |||||| |||||    
T  23734916 aagattttaaaagactttgttggattgtattgattttgtgggatttcaaaagacttttt 23734858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 39841605 - 39841667
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| || |||||| |||||||| |||| |||||||||||| ||||||    
T  39841605 tttaagattttaaaagactgtgcgagattgtattgattatgtgagattttaaaagacttttta 39841667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 44040953 - 44041011
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    |||||||||||||| |||| ||||||||||||||||||| |||||||| |||| |||||    
T  44040953 aagattttaaaagattttgcgagattatattgattttgttggattttagaagacttttt 44041011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 50761273 - 50761335
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||| | ||||||||| |||||||| |||| |||||||||||| ||||||    
T  50761273 tttaagattttaaaagattgtgtgagattgtattgattctgtgagattttaaaagacttttta 50761335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 50899498 - 50899556
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||| ||||||||||||| |||||    
T  50899498 aagattttaaaagactttgttggattgtattgattttgtcggattttaaaagacttttt 50899556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 405 - 463
Target Start/End: Original strand, 50902514 - 50902572
Alignment:
Q  405 agattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  50902514 agattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 50902572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 51736917 - 51736979
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| || |||||| |||||||| |||| |||||||||||| ||||||    
T  51736917 tttaagattttaaaagactatgcgagattgtattgattctgtgagattttaaaagacttttta 51736979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 54629895 - 54629833
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    |||||||| |||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  54629895 tttaagatgttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 54629833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 398 - 463
Target Start/End: Complemental strand, 48380188 - 48380123
Alignment:
Q  398 tcttttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    |||||||||||||||||||| | ||||||||| |||||||| |||| |||||||||| | ||||||    
T  48380188 tcttttaagattttaaaagattgtgtgagattgtattgattctgtgagattttaaaaaacttttta 48380123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 404 - 463
Target Start/End: Original strand, 24573485 - 24573544
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    |||||||||||||||||||||| |||||||| ||||||  |||||||| |||| ||||||    
T  24573485 aagattttaaaagactttgtgaaattatattaattttgatggattttagaagacttttta 24573544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 407 - 462
Target Start/End: Original strand, 38628875 - 38628930
Alignment:
Q  407 attttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    |||||||||||||||||   ||| |||||||||||||||||||||||||| |||||    
T  38628875 attttaaaagactttgttgaattgtattgattttgtgggattttaaaagacttttt 38628930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 401 - 456
Target Start/End: Complemental strand, 44707982 - 44707927
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    ||||||||||||||||||||||||||||| ||  |||| |||| ||||||||||||    
T  44707982 tttaagattttaaaagactttgtgagattgtaccgattctgtgagattttaaaaga 44707927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 10661232 - 10661170
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||| | ||||||||| |||||||| ||||  ||||||||||| ||||||    
T  10661232 tttaagattttaaaagattgtgtgagattgtattgattctgtgatattttaaaagacttttta 10661170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 454
Target Start/End: Complemental strand, 23754579 - 23754529
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaa 454  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||| ||||    
T  23754579 aagattttaaaagactttgttggattgtattgattttgtgggatttcaaaa 23754529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 26292616 - 26292673
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||| ||||||||| ||||||||||| |||||    
T  26292616 aagattttaaaagactttgttggattgtatt-attttgtggaattttaaaagacttttt 26292673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 404 - 456
Target Start/End: Complemental strand, 36786950 - 36786901
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    |||||||||||||   ||||||||||||||||| ||||| |||||||||||||    
T  36786950 aagattttaaaag---ttgtgagattatattgactttgttggattttaaaaga 36786901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 462
Target Start/End: Complemental strand, 20833943 - 20833882
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||| | ||| ||||| |||||||| |||  |||||||||||| |||||    
T  20833943 tttaagattttaaaagattgtgtaagattgtattgattctgtaagattttaaaagatttttt 20833882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 404 - 456
Target Start/End: Original strand, 46251251 - 46251303
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    ||||||||||||||||||||| |||| |||||  ||| || ||||||||||||    
T  46251251 aagattttaaaagactttgtgtgattgtattggctttttgagattttaaaaga 46251303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 2e-17; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 38821303 - 38821361
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||    
T  38821303 aagattttaaaagattttgtgagattatattgattttgttggattttaaaagacttttt 38821361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 404 - 465
Target Start/End: Original strand, 7487009 - 7487070
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaatttttaca 465  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| ||||||||    
T  7487009 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaagactttttaca 7487070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 13832718 - 13832780
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  13832718 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 13832780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 18178317 - 18178255
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  18178317 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 18178255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 20156633 - 20156691
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    |||||||||||||| |||||||||||||||||| ||||| ||||||||||||| |||||    
T  20156633 aagattttaaaagattttgtgagattatattgactttgttggattttaaaagacttttt 20156691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 25289200 - 25289138
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  25289200 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 25289138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 26789830 - 26789768
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  26789830 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 26789768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 29941923 - 29941865
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  29941923 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaagacttttt 29941865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 401 - 465
Target Start/End: Complemental strand, 3464632 - 3464568
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaatttttaca 465  Q
    ||||||||||||||||||| ||| ||||| ||||||||||||| |||||||||||| ||| ||||    
T  3464632 tttaagattttaaaagactgtgtcagattctattgattttgtgagattttaaaagactttataca 3464568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 401 - 456
Target Start/End: Complemental strand, 43079528 - 43079473
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| ||||||||||||    
T  43079528 tttaagattttaaaagactgtgtgagattgtattgattatgtgagattttaaaaga 43079473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 454
Target Start/End: Original strand, 6288608 - 6288658
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaa 454  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||||||||    
T  6288608 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaa 6288658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 28845623 - 28845561
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||| ||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  28845623 tttaagatttttaaagactatgtgagattgtattgattctgtgagattttaaaagacttttta 28845561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 33136639 - 33136577
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| | || |||||||||||| ||||||    
T  33136639 tttaagattttaaaagactgtgtgagattgtattgattctatgagattttaaaagacttttta 33136577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 34027829 - 34027887
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||| || |||||||||||||||||| ||||| ||||||||||||| |||||    
T  34027829 aagattttaaaggattttgtgagattatattgactttgttggattttaaaagacttttt 34027887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 45547949 - 45547891
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| ||||||||||||| |||||||||||| |||||    
T  45547949 aagattttaaaagactttgttggattgtattgattttgtgagattttaaaagacttttt 45547891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 462
Target Start/End: Complemental strand, 7027950 - 7027889
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||| ||| |||||    
T  7027950 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaatagacttttt 7027889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 456
Target Start/End: Complemental strand, 2289318 - 2289266
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    ||||||||||||||||||||| |||| |||||||||||  |||||||||||||    
T  2289318 aagattttaaaagactttgtgtgattgtattgattttgatggattttaaaaga 2289266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 398 - 453
Target Start/End: Complemental strand, 10658478 - 10658423
Alignment:
Q  398 tcttttaagattttaaaagactttgtgagattatattgattttgtgggattttaaa 453  Q
    |||||||||||||||||||||| | ||||||| ||||||||||||| | |||||||    
T  10658478 tcttttaagattttaaaagactgtatgagattgtattgattttgtgagtttttaaa 10658423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 404 - 456
Target Start/End: Complemental strand, 27979931 - 27979879
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    ||||||||||||||||||||| |||| |||| ||||| ||||| |||||||||    
T  27979931 aagattttaaaagactttgtgtgattgtattaattttatgggaatttaaaaga 27979879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 404 - 456
Target Start/End: Complemental strand, 28066461 - 28066409
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    ||||||||||||||||||||| |||| |||| ||||| ||||| |||||||||    
T  28066461 aagattttaaaagactttgtgtgattgtattaattttatgggaatttaaaaga 28066409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 36599197 - 36599255
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||    ||||||||||||||| ||| ||||||||||| |||||    
T  36599197 aagattttaaaagactttaatcgattatattgattttatggtattttaaaagatttttt 36599255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 406 - 456
Target Start/End: Complemental strand, 45497544 - 45497494
Alignment:
Q  406 gattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    |||||||||||| |||||| |||| |||||||||| || ||||||||||||    
T  45497544 gattttaaaagattttgtgtgattgtattgattttttgagattttaaaaga 45497494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 406 - 456
Target Start/End: Complemental strand, 45505286 - 45505236
Alignment:
Q  406 gattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    |||||||||||| |||||| |||| |||||||||| || ||||||||||||    
T  45505286 gattttaaaagattttgtgtgattgtattgattttttgagattttaaaaga 45505236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 463
Target Start/End: Original strand, 28739186 - 28739243
Alignment:
Q  406 gattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    |||||||||||||  | ||||||| |||||||| |||| |||||||||||| ||||||    
T  28739186 gattttaaaagaccgtctgagattgtattgattctgtgagattttaaaagacttttta 28739243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 404 - 456
Target Start/End: Complemental strand, 43023560 - 43023508
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    |||||||||||| ||||| || |||| |||||||||||  |||||||||||||    
T  43023560 aagattttaaaaaactttatgtgattgtattgattttgatggattttaaaaga 43023508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 2e-17; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 28386608 - 28386670
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||| ||||||    
T  28386608 tttaagattttaaaagactgtgtgagattctattgattttgtgagattttaaaagacttttta 28386670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 404 - 465
Target Start/End: Original strand, 51826013 - 51826074
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaatttttaca 465  Q
    ||||||||||||||||||||| |||| |||||||||||||| ||||||||||| ||||||||    
T  51826013 aagattttaaaagactttgtgtgattgtattgattttgtggcattttaaaagactttttaca 51826074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 405 - 465
Target Start/End: Complemental strand, 39758916 - 39758856
Alignment:
Q  405 agattttaaaagactttgtgagattatattgattttgtgggattttaaaagaatttttaca 465  Q
    |||||||||||||||||||  |||| |||||||||||||||||||||||||| ||||||||    
T  39758916 agattttaaaagactttgttggattgtattgattttgtgggattttaaaagactttttaca 39758856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 405 - 465
Target Start/End: Complemental strand, 39764270 - 39764210
Alignment:
Q  405 agattttaaaagactttgtgagattatattgattttgtgggattttaaaagaatttttaca 465  Q
    |||||||||||||||||||  |||| |||||||||||||||||||||||||| ||||||||    
T  39764270 agattttaaaagactttgttggattgtattgattttgtgggattttaaaagactttttaca 39764210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 400 - 463
Target Start/End: Complemental strand, 45273607 - 45273544
Alignment:
Q  400 ttttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    |||||||||||||||||||| | |||||||||||||||||| || |||||||||||| ||||||    
T  45273607 ttttaagattttaaaagactatatgagattatattgattttatgagattttaaaagacttttta 45273544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 1923421 - 1923479
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    |||||||||||||| |||||||||||||||||| ||||| ||||||||||||| |||||    
T  1923421 aagattttaaaagattttgtgagattatattgactttgttggattttaaaagacttttt 1923479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 6313621 - 6313559
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  6313621 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 6313559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 9321669 - 9321731
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  9321669 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 9321731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 14389456 - 14389398
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  14389456 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaagacttttt 14389398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 20111731 - 20111793
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||||||||||||| || ||||| |||| |||||||||||| ||||||    
T  20111731 tttaagattttaaaagactttgtgagattgtactgattctgtgagattttaaaagacttttta 20111793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 25613137 - 25613075
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  25613137 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 25613075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 29220157 - 29220095
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  29220157 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 29220095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 29395587 - 29395649
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  29395587 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 29395649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 51702639 - 51702577
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  51702639 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 51702577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 52706422 - 52706364
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  52706422 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaagacttttt 52706364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 28038388 - 28038445
Alignment:
Q  405 agattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||| |||||||||||||| | ||||||||||||| |||||    
T  28038388 agattttaaaagactttgtgaaattatattgattttataggattttaaaagacttttt 28038445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 401 - 456
Target Start/End: Complemental strand, 48198992 - 48198937
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    |||||||||||||||||||||||| |||| |||||||| |||| ||||||||||||    
T  48198992 tttaagattttaaaagactttgtgggattgtattgattctgtgagattttaaaaga 48198937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 401 - 456
Target Start/End: Complemental strand, 48207575 - 48207520
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    |||||||||||||||||||||||| |||| |||||||| |||| ||||||||||||    
T  48207575 tttaagattttaaaagactttgtgggattgtattgattctgtgagattttaaaaga 48207520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 5494307 - 5494369
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||| | ||||||    
T  5494307 tttaagattttaaaagactctgtgagattgtattgattatgtgagattttaaaacacttttta 5494369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 454
Target Start/End: Complemental strand, 19894858 - 19894808
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaa 454  Q
    |||||||||||||| |||||| ||||||||||||||||||| |||||||||    
T  19894858 aagattttaaaagattttgtgtgattatattgattttgtggaattttaaaa 19894808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 26881868 - 26881926
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||| ||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  26881868 aagattttagaagactttgttggattgtattgattttgtgggattttaaaagatttttt 26881926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 45319509 - 45319451
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| ||||||||||| |||||||||||||| |||||    
T  45319509 aagattttaaaagactttgttggattgtattgattttgcgggattttaaaagacttttt 45319451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 49232029 - 49231967
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||| | ||||||    
T  49232029 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaatacttttta 49231967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 400 - 463
Target Start/End: Complemental strand, 46329012 - 46328949
Alignment:
Q  400 ttttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    |||| |||||| |||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  46329012 tttttagatttcaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 46328949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 45535791 - 45535733
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||| |||| |||||  |||| |||||||||||||||||||||||||| |||||    
T  45535791 aagattttagaagattttgttggattgtattgattttgtgggattttaaaagacttttt 45535733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 407 - 465
Target Start/End: Complemental strand, 4289923 - 4289865
Alignment:
Q  407 attttaaaagactttgtgagattatattgattttgtgggattttaaaagaatttttaca 465  Q
    ||||||||||||||||||  ||| |||||||| | |||||||||||| || ||||||||    
T  4289923 attttaaaagactttgtgtaattctattgattatatgggattttaaatgactttttaca 4289865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 38535306 - 38535368
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    |||||||||||||||| || ||| ||||| |||||||| | || |||||||||||| ||||||    
T  38535306 tttaagattttaaaagtctgtgttagattgtattgattctatgagattttaaaagacttttta 38535368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 38557524 - 38557586
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    |||||||||||||||| || ||| ||||| |||||||| | || |||||||||||| ||||||    
T  38557524 tttaagattttaaaagtctgtgttagattgtattgattctatgagattttaaaagacttttta 38557586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 6e-17; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 398 - 463
Target Start/End: Original strand, 4199634 - 4199699
Alignment:
Q  398 tcttttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    |||||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  4199634 tcttttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 4199699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 403 - 454
Target Start/End: Original strand, 10262853 - 10262904
Alignment:
Q  403 taagattttaaaagactttgtgagattatattgattttgtgggattttaaaa 454  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  10262853 taagattttaaaagactttgtgagattatattgattatgttggattttaaaa 10262904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 3109402 - 3109460
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  3109402 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaagacttttt 3109460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 6475795 - 6475853
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  6475795 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaagacttttt 6475853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 14261600 - 14261662
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  14261600 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 14261662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 29864804 - 29864862
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  29864804 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaagacttttt 29864862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 30384221 - 30384283
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  30384221 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 30384283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 405 - 456
Target Start/End: Complemental strand, 5958088 - 5958037
Alignment:
Q  405 agattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    |||||||||||||||||||| ||||||||||||||||  |||||||||||||    
T  5958088 agattttaaaagactttgtgtgattatattgattttgatggattttaaaaga 5958037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 401 - 456
Target Start/End: Complemental strand, 7104569 - 7104514
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    |||||||||||||||||||||||| |||| |||||||| |||| ||||||||||||    
T  7104569 tttaagattttaaaagactttgtgggattgtattgattctgtgagattttaaaaga 7104514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 401 - 456
Target Start/End: Original strand, 8790061 - 8790116
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    |||||||||||||||||||||||| |||| |||||||| |||| ||||||||||||    
T  8790061 tttaagattttaaaagactttgtgggattgtattgattctgtgagattttaaaaga 8790116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 401 - 456
Target Start/End: Original strand, 27585234 - 27585289
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| ||||||||||||    
T  27585234 tttaagattttaaaagactgtgtgagattttattgattctgtgagattttaaaaga 27585289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 7498135 - 7498073
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||| | ||||||||| |||||||| |||| |||||||||||| ||||||    
T  7498135 tttaagattttaaaagattgtgtgagattgtattgattctgtgagattttaaaagacttttta 7498073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 31068465 - 31068403
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||  ||||||||||| ||||||    
T  31068465 tttaagattttaaaagactgtgtgagattgtattgattctgtgatattttaaaagacttttta 31068403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 31896682 - 31896620
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||| ||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  31896682 tttaagattttaaaatactgtgtgagattgtattgattctgtgagattttaaaagacttttta 31896620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 34774430 - 34774368
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||| ||||| |||||||| |||| |||||||||||| ||||||    
T  34774430 tttaagattttaaaagactgtgtaagattgtattgattctgtgagattttaaaagacttttta 34774368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 20499 - 20557
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  20499 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaagacttttt 20557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 33877 - 33935
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  33877 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaagacttttt 33935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 80845 - 80903
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  80845 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaagacttttt 80903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 1459345 - 1459407
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  1459345 tttaagattttaaaagactgtgtgagattgtattgattatgtgagattttaaaagacttttta 1459407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 10553770 - 10553712
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  10553770 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaagacttttt 10553712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 13717140 - 13717078
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||| | ||||||||| ||||||||||||| |||||||||||| ||||||    
T  13717140 tttaagattttaaaagattgtgtgagattgtattgattttgtgagattttaaaagacttttta 13717078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 13999264 - 13999326
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  13999264 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 13999326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 40012867 - 40012929
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||  ||||||||| ||||||||||||| |||||||||||| ||||||    
T  40012867 tttaagattttaaaagacagtgtgagattgtattgattttgtgagattttaaaagacttttta 40012929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 40411451 - 40411393
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  40411451 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaagacttttt 40411393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 1151449 - 1151511
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||| | ||||||||| |||||||| |||| |||||||||||| ||||||    
T  1151449 tttaagattttaaaagattgtgtgagattgtattgattctgtgagattttaaaagacttttta 1151511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 3603512 - 3603570
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||| ||||||||||| |||||    
T  3603512 aagattttaaaagactttgttggattgtattgattttgtggaattttaaaagatttttt 3603570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 4239630 - 4239692
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||| ||| |||| |||||||||||| ||||||    
T  4239630 tttaagattttaaaagactgtgtgagattttattaattctgtgagattttaaaagacttttta 4239692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 4549415 - 4549477
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||| | ||||||||| |||||||| |||| |||||||||||| ||||||    
T  4549415 tttaagattttaaaagattgtgtgagattgtattgattctgtgagattttaaaagacttttta 4549477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 7947183 - 7947245
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||  ||||||||| |||||||| |||| |||||||||||| ||||||    
T  7947183 tttaagattttaaaagaccgtgtgagattgtattgattctgtgagattttaaaagatttttta 7947245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 454
Target Start/End: Original strand, 10553491 - 10553541
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaa 454  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||||||||    
T  10553491 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaa 10553541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 454
Target Start/End: Original strand, 11632738 - 11632788
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaa 454  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||||||||    
T  11632738 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaa 11632788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 13926977 - 13926915
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    |||||||||| |||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  13926977 tttaagatttaaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 13926915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 13949853 - 13949911
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||||||| ||||||| |||||    
T  13949853 aagattttaaaagactttgttggattgtattgattttgtgggattataaaagacttttt 13949911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 405 - 463
Target Start/End: Complemental strand, 39853393 - 39853335
Alignment:
Q  405 agattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  39853393 agattttaaaagactctgtgagattgtattgattctgtgagattttaaaagacttttta 39853335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 407 - 462
Target Start/End: Complemental strand, 17519548 - 17519493
Alignment:
Q  407 attttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||| ||||| |||||||| |||| |||||||||||| |||||    
T  17519548 attttaaaagactttgtaagattttattgattctgtgagattttaaaagatttttt 17519493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 398 - 463
Target Start/End: Complemental strand, 5950166 - 5950101
Alignment:
Q  398 tcttttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    |||||||||||||||||| | | ||||||||| |||||||| |||| ||||||||| || ||||||    
T  5950166 tcttttaagattttaaaatattatgtgagattgtattgattctgtgagattttaaatgacttttta 5950101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 404 - 456
Target Start/End: Original strand, 2275321 - 2275373
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    ||||||||||||||||||||| |||| |||||||||||  ||||| |||||||    
T  2275321 aagattttaaaagactttgtgtgattgtattgattttgatggattctaaaaga 2275373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 465
Target Start/End: Original strand, 32827897 - 32827954
Alignment:
Q  408 ttttaaaagactttgtgagattatattgattttgtgggattttaaaagaatttttaca 465  Q
    ||||||||||||||||  |||| |||||||||  ||||||||| ||||| ||||||||    
T  32827897 ttttaaaagactttgttggattgtattgatttaatgggattttgaaagactttttaca 32827954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 8583053 - 8583111
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  8583053 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaagatttttt 8583111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 27769109 - 27769047
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  27769109 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 27769047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 32683184 - 32683246
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  32683184 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagatttttta 32683246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 54342192 - 54342130
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  54342192 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 54342130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 404 - 465
Target Start/End: Complemental strand, 7809032 - 7808971
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaatttttaca 465  Q
    ||||||||||||||||||||  |||| |||||||||||| ||||||||||||| ||||||||    
T  7809032 aagattttaaaagactttgttggattgtattgattttgtaggattttaaaagactttttaca 7808971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 401 - 465
Target Start/End: Original strand, 49834022 - 49834086
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaatttttaca 465  Q
    ||||||||||||||||| | ||||||||| ||||||||||||| |||||||||||| ||| ||||    
T  49834022 tttaagattttaaaagattatgtgagattgtattgattttgtgagattttaaaagactttataca 49834086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 5442436 - 5442376
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    |||||||||||||||||||  |||||||| ||||||||||||| |||||||||||| ||||||    
T  5442436 tttaagattttaaaagact--gtgagattgtattgattttgtgagattttaaaagacttttta 5442376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 3434879 - 3434937
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||||| ||||||||||| |||||    
T  3434879 aagattttaaaagactttgttggattgtattgattttgtggaattttaaaagatttttt 3434937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 405 - 463
Target Start/End: Complemental strand, 5801746 - 5801688
Alignment:
Q  405 agattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  5801746 agattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 5801688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 7820983 - 7820925
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||||  |||| |||||||||||| ||||||||||||| |||||    
T  7820983 aagattttaaaagactttgttggattgtattgattttgtaggattttaaaagacttttt 7820925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 23988242 - 23988180
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||| | ||||||||| |||||||| |||| |||||||||||| ||||||    
T  23988242 tttaagattttaaaagaatatgtgagattgtattgattctgtgagattttaaaagacttttta 23988180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 29649179 - 29649241
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| | || |||||||||||| ||||||    
T  29649179 tttaagattttaaaagactgtgtgagattgtattgattctatgagattttaaaagacttttta 29649241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 32323114 - 32323052
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||| | ||||||||| |||||||| |||| |||||||||||| ||||||    
T  32323114 tttaagattttaaaagattgtgtgagattgtattgattctgtgagattttaaaagacttttta 32323052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 454
Target Start/End: Complemental strand, 42315916 - 42315866
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaa 454  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||||||||    
T  42315916 aagattttaaaagactttgttggattgtattgattttgtgggattttaaaa 42315866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 48262120 - 48262058
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||| ||| |||||||| |||| |||||||||||| ||||||    
T  48262120 tttaagattttaaaagactgtgtgaaattgtattgattctgtgagattttaaaagacttttta 48262058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 50019236 - 50019174
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||| ||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  50019236 tttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 50019174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 401 - 456
Target Start/End: Complemental strand, 38234648 - 38234593
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    |||||||||||||||||||||||| |||| |||||||| |||  ||||||||||||    
T  38234648 tttaagattttaaaagactttgtgggattgtattgattctgtaagattttaaaaga 38234593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 405 - 456
Target Start/End: Complemental strand, 53272880 - 53272829
Alignment:
Q  405 agattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    |||||||||||||||||||| |||| |||||||||| || ||||||||||||    
T  53272880 agattttaaaagactttgtgtgattctattgattttatgagattttaaaaga 53272829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 16654215 - 16654157
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    |||||||||||||| |||||||||||||| ||| ||||| | ||||||||||| |||||    
T  16654215 aagattttaaaagattttgtgagattatactgactttgttgaattttaaaagacttttt 16654157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 30966234 - 30966296
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||| | | |||||||||||||||| | || |||||||||||| ||||||    
T  30966234 tttaagattttaaaagattgtatgagattatattgattctatgagattttaaaagacttttta 30966296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 37827585 - 37827647
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||||||| | || ||||||||| || ||||||    
T  37827585 tttaagattttaaaagactgtgtgagattgtattgattctctgagattttaaatgacttttta 37827647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 41726151 - 41726089
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||| | | ||||||| |||||||| |||| |||||||||||| ||||||    
T  41726151 tttaagattttaaaagattgtttgagattgtattgattatgtgagattttaaaagacttttta 41726089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 462
Target Start/End: Original strand, 42217500 - 42217557
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||| ||||||||  |||| |||||||||||||||||||||||||| |||||    
T  42217500 aagattttaaa-gactttgttggattgtattgattttgtgggattttaaaagacttttt 42217557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 48531970 - 48532032
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||| | ||| ||||| |||||||| |||| |||||||||||| ||||||    
T  48531970 tttaagattttaaaagattctgtaagattgtattgattctgtgagattttaaaagacttttta 48532032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 49500689 - 49500751
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| || |||||| |||||||| ||||  ||||||||||| ||||||    
T  49500689 tttaagattttaaaagactgtgcgagattgtattgattctgtgaaattttaaaagacttttta 49500751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 51321901 - 51321839
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    |||||||||||||| |||| ||||||||| |||||||| ||||  ||||||||||| ||||||    
T  51321901 tttaagattttaaacgactatgtgagattgtattgattctgtgaaattttaaaagacttttta 51321839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 402 - 463
Target Start/End: Complemental strand, 28484916 - 28484855
Alignment:
Q  402 ttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    |||| ||||||||||| | ||||| ||| ||||||||||||| |||||||||||| ||||||    
T  28484916 ttaaaattttaaaagattgtgtgaaattgtattgattttgtgagattttaaaagatttttta 28484855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 404 - 456
Target Start/End: Complemental strand, 52110294 - 52110242
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    |||||||||||||| |||||| |||| |||||||||| || ||||||||||||    
T  52110294 aagattttaaaagattttgtgcgattgtattgattttttgagattttaaaaga 52110242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 401 - 462
Target Start/End: Complemental strand, 37916842 - 37916776
Alignment:
Q  401 tttaagattttaaaagactttgtgag-----attatattgattttgtgggattttaaaagaattttt 462  Q
    ||||||||||||||||||| ||||||     ||| ||||||||||||| |||||||||||| |||||    
T  37916842 tttaagattttaaaagactgtgtgagattgtattgtattgattttgtgagattttaaaagacttttt 37916776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 404 - 450
Target Start/End: Complemental strand, 44647756 - 44647710
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggatttt 450  Q
    ||||||| ||||||||||||| |||| | ||||||||||||||||||    
T  44647756 aagatttgaaaagactttgtgtgattgtgttgattttgtgggatttt 44647710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 402 - 463
Target Start/End: Original strand, 57220 - 57281
Alignment:
Q  402 ttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    |||||||||||||||||| ||||||||| |||||||| |||| |||||||||||| ||||||    
T  57220 ttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttta 57281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 404 - 456
Target Start/End: Original strand, 990 - 1042
Alignment:
Q  404 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 456  Q
    |||||||||||||| |||||| |||| ||||||||||||||||||||||||||    
T  990 aagattttaaaagattttgtgtgattgtattgattttgtgggattttaaaaga 1042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0940 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0940
Description:

Target: scaffold0940; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 3623 - 3685
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||| ||||| ||||||||| |||||||| |||| |||||||||| | ||||||    
T  3623 tttaagattttaagagactgtgtgagattgtattgattctgtgagattttaaaaaacttttta 3685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 3163 - 3225
Alignment:
Q  401 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||| ||||||||| |||| ||| |||| |||||||| ||| ||||||    
T  3163 tttaagattttaaaagactgtgtgagattgtattaattatgtgagattttaagagacttttta 3225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1521 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold1521
Description:

Target: scaffold1521; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 398 - 463
Target Start/End: Original strand, 1339 - 1404
Alignment:
Q  398 tcttttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    |||| ||||||||| ||||||  ||||||||| |||||||| |||| |||||||||||| ||||||    
T  1339 tcttataagatttttaaagaccgtgtgagattgtattgattctgtgagattttaaaagacttttta 1404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 398 - 463
Target Start/End: Original strand, 16194 - 16259
Alignment:
Q  398 tcttttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    |||| ||||||||| ||||||  ||||||||| |||||||| |||| |||||||||||| ||||||    
T  16194 tcttataagatttttaaagaccgtgtgagattgtattgattctgtgagattttaaaagacttttta 16259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 398 - 463
Target Start/End: Original strand, 20421 - 20486
Alignment:
Q  398 tcttttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    |||| ||||||||| ||||||  ||||||||| |||||||| |||| |||||||||||| ||||||    
T  20421 tcttataagatttttaaagaccgtgtgagattgtattgattctgtgagattttaaaagacttttta 20486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 398 - 463
Target Start/End: Complemental strand, 29380 - 29315
Alignment:
Q  398 tcttttaagattttaaaagactttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    |||| ||||||||| ||||||  ||||||||| |||||||| |||| |||||||||||| ||||||    
T  29380 tcttataagatttttaaagaccgtgtgagattgtattgattctgtgagattttaaaagacttttta 29315  T

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Target: scaffold0110 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 400 - 463
Target Start/End: Original strand, 38796 - 38864
Alignment:
Q  400 ttttaagattttaaaagact-----ttgtgagattatattgattttgtgggattttaaaagaattttta 463  Q
    ||||||||||||||||||||      ||||||||| |||||||| |||| |||||||||||| ||||||    
T  38796 ttttaagattttaaaagactgtgtgatgtgagattgtattgattctgtgagattttaaaagatttttta 38864  T

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