View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18369_low_21 (Length: 245)
Name: NF18369_low_21
Description: NF18369
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18369_low_21 |
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Alignment Details
Target: chr6 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 783286 - 783515
Alignment:
| Q |
1 |
gttatcttcttccaaactcctgtctcacctatcaatgcccttggtaagtctctctaatggtccacatattttcaagtacttgcaaatttttggtgtcttc |
100 |
Q |
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| T |
783286 |
gttatcttcttccaaactcctgtctcacctatcaatgcccttggtaagtctctctaatggtccacatattttcaagtacttgcaaatttttggtgtcttc |
783385 |
T |
|
| Q |
101 |
gaagtcacaaaaattgctacaacttatgggaccatttactatccatatttcttcttttaattttcacgtcaaccaataaacatgatagaatatatattcg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
783386 |
gaagtcacaaaaattgctacaacttatgggaccatttactatccatatttcttcttttaattttcacgtcaaccaataaacatgatagaatatatattcg |
783485 |
T |
|
| Q |
201 |
atattttctcgccattttcatttacttttt |
230 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
783486 |
atattttctcgccattttcatttacttttt |
783515 |
T |
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