View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1836_high_103 (Length: 241)
Name: NF1836_high_103
Description: NF1836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1836_high_103 |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 8 - 233
Target Start/End: Original strand, 34135033 - 34135258
Alignment:
| Q |
8 |
gatgaaacatacctttgtttaggcatacttaagtgaaagcattacatactgatattaaacgttaacttatcttaaatagatcctgcgggttctttgttat |
107 |
Q |
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| T |
34135033 |
gatgaaacatacctttgtttaggcatacttaagtgaaagcattacatactgatattaaacgttaacttatcttaaatagatcctgcgggttctttgttat |
34135132 |
T |
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| Q |
108 |
gtttaggatggggtaagcggaaactatcaaacatctattattggagtgtgacttttataagaatgtttggcattaggctctttggtggcgtacatatatt |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |
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| T |
34135133 |
gtttaggatggggtaagcggaaactatcaaacatctattattggagtgtgacttttataagaatgttaggcattaggttctttggtggcgtacatatatt |
34135232 |
T |
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| Q |
208 |
taggaatgaaatttgtgtttcttttc |
233 |
Q |
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|||||||||||||||||||| ||||| |
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| T |
34135233 |
taggaatgaaatttgtgtttgttttc |
34135258 |
T |
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