View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1836_high_105 (Length: 238)
Name: NF1836_high_105
Description: NF1836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1836_high_105 |
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Alignment Details
Target: chr8 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 18 - 228
Target Start/End: Complemental strand, 44007273 - 44007063
Alignment:
| Q |
18 |
ctttttcaaatacactttcaatcaatggtctttgaatcctttgggctgtttgggaatattgattacatagggggaatcatagatgttggtaaaagttgaa |
117 |
Q |
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| T |
44007273 |
ctttttcaaatacactttcaatcaatggtctttgaatcctttgggctgtttgggaatattgattacatagggggaatcatagatgttggtaaaagttgaa |
44007174 |
T |
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| Q |
118 |
aaggagttggacgtagcttagggagttatggctcactgtcttacttcttttgttttctctattttgtatttgttatattgggagtagcagttagtcacat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44007173 |
aaggagttggacgtagcttagggagttatggctcactgtcttacttcttttgttttctctattttgtatttgttatattgggagtagcagttagtcacat |
44007074 |
T |
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| Q |
218 |
atgcacaggtt |
228 |
Q |
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| T |
44007073 |
atgcataggtt |
44007063 |
T |
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