View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1836_low_125 (Length: 226)

Name: NF1836_low_125
Description: NF1836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1836_low_125
NF1836_low_125
[»] chr5 (52 HSPs)
chr5 (1-226)||(26414776-26414999)
chr5 (118-226)||(13634708-13634817)
chr5 (121-226)||(16938479-16938585)
chr5 (119-226)||(20147014-20147116)
chr5 (118-226)||(7544133-7544242)
chr5 (117-226)||(28279614-28279725)
chr5 (129-226)||(2550490-2550588)
chr5 (115-216)||(40815291-40815393)
chr5 (113-192)||(1657985-1658065)
chr5 (117-192)||(14245084-14245160)
chr5 (119-226)||(10476024-10476134)
chr5 (129-226)||(36363040-36363138)
chr5 (122-208)||(13634867-13634954)
chr5 (119-222)||(14681468-14681571)
chr5 (121-226)||(4373704-4373810)
chr5 (129-226)||(11756886-11756983)
chr5 (123-226)||(22022849-22022956)
chr5 (121-192)||(14245218-14245290)
chr5 (119-226)||(36392288-36392395)
chr5 (119-197)||(11436937-11437016)
chr5 (129-226)||(10650435-10650535)
chr5 (118-226)||(15986762-15986871)
chr5 (159-226)||(9856919-9856986)
chr5 (123-208)||(7544292-7544378)
chr5 (118-226)||(10204573-10204682)
chr5 (165-222)||(11419303-11419360)
chr5 (118-226)||(33744331-33744440)
chr5 (123-226)||(34980812-34980916)
chr5 (129-191)||(36363205-36363268)
chr5 (123-216)||(42681450-42681549)
chr5 (166-224)||(10072787-10072845)
chr5 (119-208)||(16938635-16938725)
chr5 (121-189)||(10476203-10476272)
chr5 (121-158)||(11437149-11437186)
chr5 (124-192)||(11757075-11757144)
chr5 (182-226)||(8502973-8503017)
chr5 (151-222)||(9798754-9798826)
chr5 (121-192)||(33744193-33744265)
chr5 (165-221)||(37606940-37606995)
chr5 (121-191)||(10650587-10650658)
chr5 (123-226)||(16501928-16502034)
chr5 (118-161)||(40305869-40305912)
chr5 (159-213)||(2550391-2550445)
chr5 (119-192)||(8502833-8502907)
chr5 (120-189)||(20513612-20513682)
chr5 (121-158)||(5688597-5688634)
chr5 (113-146)||(35176756-35176789)
chr5 (165-197)||(37551453-37551485)
chr5 (121-184)||(37551585-37551649)
chr5 (165-197)||(37654283-37654315)
chr5 (121-184)||(37654415-37654479)
chr5 (121-161)||(40305670-40305710)
[»] chr7 (45 HSPs)
chr7 (119-226)||(39856003-39856111)
chr7 (119-226)||(13771084-13771192)
chr7 (114-226)||(1051636-1051749)
chr7 (124-226)||(33655246-33655349)
chr7 (121-222)||(47390855-47390957)
chr7 (150-226)||(41497095-41497172)
chr7 (121-226)||(25887192-25887298)
chr7 (121-226)||(34228456-34228563)
chr7 (117-226)||(37925837-37925947)
chr7 (117-226)||(40196670-40196769)
chr7 (159-225)||(43230275-43230341)
chr7 (122-226)||(31571606-31571713)
chr7 (119-207)||(4833529-4833618)
chr7 (159-226)||(17852910-17852977)
chr7 (117-188)||(18231762-18231834)
chr7 (123-226)||(24970303-24970407)
chr7 (129-226)||(34235145-34235239)
chr7 (121-192)||(40196532-40196604)
chr7 (121-208)||(41496957-41497045)
chr7 (121-192)||(48881558-48881630)
chr7 (161-216)||(23029482-23029537)
chr7 (121-191)||(36267553-36267624)
chr7 (129-226)||(41008190-41008289)
chr7 (124-216)||(26365770-26365864)
chr7 (119-188)||(30592251-30592321)
chr7 (118-226)||(33519045-33519154)
chr7 (117-226)||(37417771-37417871)
chr7 (124-208)||(42306486-42306571)
chr7 (121-192)||(13770948-13771020)
chr7 (121-188)||(33519224-33519292)
chr7 (118-192)||(28074100-28074175)
chr7 (124-214)||(18795745-18795835)
chr7 (129-186)||(40282205-40282263)
chr7 (123-208)||(45940658-45940744)
chr7 (119-192)||(47391028-47391102)
chr7 (159-216)||(10315652-10315709)
chr7 (124-173)||(31364237-31364285)
chr7 (162-223)||(42306376-42306437)
chr7 (160-208)||(33655148-33655196)
chr7 (121-161)||(36267757-36267797)
chr7 (119-193)||(48015378-48015453)
chr7 (131-192)||(35422136-35422198)
chr7 (119-191)||(4835477-4835550)
chr7 (113-189)||(25887368-25887444)
chr7 (119-156)||(48881758-48881795)
[»] scaffold0067 (2 HSPs)
scaffold0067 (119-226)||(39328-39436)
scaffold0067 (121-208)||(39186-39275)
[»] chr4 (57 HSPs)
chr4 (119-226)||(54935065-54935174)
chr4 (118-226)||(31348459-31348568)
chr4 (119-226)||(54320433-54320540)
chr4 (119-216)||(1968507-1968605)
chr4 (129-226)||(27735753-27735851)
chr4 (119-226)||(37711136-37711249)
chr4 (124-225)||(46007840-46007942)
chr4 (121-226)||(47433846-47433953)
chr4 (121-226)||(26166937-26167043)
chr4 (137-226)||(49735606-49735695)
chr4 (118-192)||(49735465-49735540)
chr4 (121-222)||(45741890-45741992)
chr4 (118-226)||(56135746-56135855)
chr4 (119-226)||(5730968-5731077)
chr4 (119-215)||(29798286-29798383)
chr4 (123-214)||(2247952-2248043)
chr4 (121-192)||(54935241-54935313)
chr4 (118-192)||(54576324-54576399)
chr4 (172-226)||(35248738-35248792)
chr4 (134-226)||(6891373-6891466)
chr4 (122-226)||(36151577-36151682)
chr4 (121-197)||(45132662-45132739)
chr4 (137-216)||(24565492-24565572)
chr4 (121-192)||(37711295-37711367)
chr4 (117-208)||(45742046-45742138)
chr4 (121-192)||(54320606-54320678)
chr4 (129-197)||(6938289-6938358)
chr4 (148-208)||(31348348-31348409)
chr4 (137-192)||(21694906-21694962)
chr4 (121-188)||(22186719-22186787)
chr4 (118-208)||(17938264-17938355)
chr4 (119-197)||(21695055-21695134)
chr4 (123-192)||(27735917-27735987)
chr4 (119-192)||(41174517-41174591)
chr4 (119-191)||(6938420-6938493)
chr4 (130-222)||(16400809-16400902)
chr4 (128-192)||(17938114-17938179)
chr4 (123-187)||(47846233-47846298)
chr4 (121-169)||(49735687-49735736)
chr4 (121-192)||(5730830-5730902)
chr4 (121-192)||(37761636-37761708)
chr4 (119-175)||(53260716-53260771)
chr4 (119-189)||(7977672-7977743)
chr4 (119-193)||(11089687-11089755)
chr4 (129-175)||(35565566-35565613)
chr4 (121-226)||(17182623-17182729)
chr4 (118-191)||(24565343-24565417)
chr4 (166-224)||(28332850-28332908)
chr4 (176-214)||(36277781-36277819)
chr4 (177-226)||(34995108-34995157)
chr4 (176-216)||(2917111-2917151)
chr4 (121-216)||(22920981-22921077)
chr4 (121-216)||(22970722-22970818)
chr4 (129-192)||(35248858-35248922)
chr4 (172-216)||(41174397-41174441)
chr4 (166-226)||(44784038-44784098)
chr4 (150-189)||(44784166-44784206)
[»] chr2 (47 HSPs)
chr2 (121-226)||(36347679-36347785)
chr2 (116-226)||(15224832-15224943)
chr2 (121-226)||(35736175-35736281)
chr2 (129-225)||(8427010-8427107)
chr2 (121-224)||(39732869-39732972)
chr2 (115-226)||(41778767-41778879)
chr2 (123-225)||(36046341-36046443)
chr2 (119-226)||(19566959-19567062)
chr2 (167-226)||(9591973-9592032)
chr2 (112-209)||(9426976-9427074)
chr2 (119-192)||(9631732-9631806)
chr2 (119-192)||(23748267-23748341)
chr2 (159-225)||(39821708-39821774)
chr2 (123-223)||(41841684-41841785)
chr2 (123-226)||(2241413-2241516)
chr2 (121-192)||(22356176-22356248)
chr2 (117-192)||(35736359-35736435)
chr2 (118-225)||(12541767-12541871)
chr2 (159-226)||(23748134-23748201)
chr2 (123-208)||(8426881-8426967)
chr2 (119-192)||(17380013-17380087)
chr2 (121-226)||(42296441-42296547)
chr2 (118-214)||(31795766-31795863)
chr2 (119-226)||(2381125-2381233)
chr2 (165-221)||(28262586-28262642)
chr2 (119-226)||(31061357-31061465)
chr2 (129-226)||(31795907-31796000)
chr2 (124-222)||(36566993-36567093)
chr2 (114-161)||(17379839-17379886)
chr2 (121-191)||(45257480-45257551)
chr2 (111-216)||(3094501-3094607)
chr2 (130-214)||(40022523-40022608)
chr2 (121-226)||(40022363-40022476)
chr2 (130-188)||(886927-886986)
chr2 (125-160)||(33265611-33265646)
chr2 (122-192)||(36046205-36046276)
chr2 (108-226)||(45257294-45257413)
chr2 (119-208)||(36347539-36347629)
chr2 (159-208)||(1583233-1583282)
chr2 (159-208)||(15224733-15224782)
chr2 (129-181)||(31061543-31061596)
chr2 (140-191)||(887283-887335)
chr2 (119-191)||(7681417-7681488)
chr2 (177-226)||(16565832-16565883)
chr2 (129-188)||(31928225-31928285)
chr2 (119-226)||(34187573-34187681)
chr2 (159-207)||(39732768-39732816)
[»] chr1 (43 HSPs)
chr1 (121-226)||(30010332-30010438)
chr1 (119-226)||(12234008-12234116)
chr1 (117-226)||(40095071-40095182)
chr1 (121-226)||(32951456-32951562)
chr1 (119-222)||(10391870-10391974)
chr1 (121-216)||(35349610-35349706)
chr1 (129-226)||(2859070-2859168)
chr1 (118-226)||(38510032-38510141)
chr1 (119-211)||(41498402-41498495)
chr1 (118-192)||(30010504-30010579)
chr1 (132-213)||(7444489-7444571)
chr1 (129-226)||(51597676-51597774)
chr1 (121-207)||(40094933-40095020)
chr1 (120-213)||(26324013-26324112)
chr1 (121-192)||(38509894-38509966)
chr1 (123-192)||(12234182-12234252)
chr1 (127-191)||(25268437-25268502)
chr1 (119-192)||(35349464-35349536)
chr1 (121-188)||(35927988-35928056)
chr1 (159-226)||(8529838-8529905)
chr1 (159-226)||(50744419-50744486)
chr1 (121-205)||(2858932-2859017)
chr1 (165-226)||(45585823-45585884)
chr1 (121-207)||(41498561-41498649)
chr1 (117-192)||(47261443-47261519)
chr1 (119-222)||(49946730-49946834)
chr1 (121-226)||(1085628-1085734)
chr1 (159-216)||(2470883-2470940)
chr1 (124-192)||(20576136-20576205)
chr1 (119-171)||(20607410-20607463)
chr1 (129-192)||(35512969-35513033)
chr1 (118-192)||(8529971-8530046)
chr1 (118-161)||(51303381-51303424)
chr1 (160-226)||(6563618-6563683)
chr1 (117-192)||(1085485-1085562)
chr1 (116-192)||(7444667-7444744)
chr1 (121-189)||(40709292-40709361)
chr1 (159-192)||(41676453-41676486)
chr1 (159-192)||(44210946-44210979)
chr1 (121-188)||(525276-525344)
chr1 (121-161)||(20607223-20607263)
chr1 (166-226)||(44211043-44211103)
chr1 (121-188)||(49832547-49832615)
[»] chr8 (49 HSPs)
chr8 (121-226)||(31543210-31543316)
chr8 (129-225)||(7979148-7979245)
chr8 (121-226)||(11033419-11033523)
chr8 (121-226)||(7503092-7503198)
chr8 (119-224)||(1026989-1027094)
chr8 (129-226)||(1281151-1281249)
chr8 (158-226)||(42650474-42650542)
chr8 (129-226)||(11575544-11575642)
chr8 (117-226)||(12022281-12022391)
chr8 (121-221)||(13404976-13405077)
chr8 (123-226)||(30479855-30479959)
chr8 (121-192)||(43732859-43732931)
chr8 (118-226)||(6315063-6315168)
chr8 (121-215)||(9718628-9718723)
chr8 (159-226)||(16652988-16653055)
chr8 (121-226)||(2248452-2248558)
chr8 (134-223)||(3726996-3727086)
chr8 (117-226)||(10028106-10028216)
chr8 (123-226)||(28083744-28083848)
chr8 (121-224)||(40990324-40990427)
chr8 (124-225)||(37923217-37923320)
chr8 (119-208)||(31543070-31543160)
chr8 (156-226)||(37032415-37032485)
chr8 (161-226)||(41103644-41103709)
chr8 (119-189)||(8815316-8815387)
chr8 (159-222)||(11785565-11785628)
chr8 (129-216)||(33922533-33922616)
chr8 (129-189)||(36309018-36309079)
chr8 (121-192)||(3726863-3726935)
chr8 (129-208)||(11575415-11575494)
chr8 (114-192)||(11785698-11785777)
chr8 (118-192)||(16024326-16024400)
chr8 (118-188)||(43732676-43732747)
chr8 (120-189)||(7394636-7394706)
chr8 (121-189)||(12022142-12022212)
chr8 (119-188)||(30365306-30365376)
chr8 (119-184)||(41103502-41103568)
chr8 (148-208)||(16653105-16653166)
chr8 (138-226)||(31738440-31738529)
chr8 (121-192)||(8815141-8815213)
chr8 (121-192)||(31738595-31738667)
chr8 (119-226)||(29358477-29358587)
chr8 (121-226)||(30365130-30365236)
chr8 (119-192)||(34634315-34634389)
chr8 (121-181)||(4247699-4247764)
chr8 (123-226)||(16024155-16024260)
chr8 (148-192)||(30581985-30582030)
chr8 (121-161)||(8671998-8672038)
chr8 (166-226)||(30664407-30664467)
[»] chr3 (44 HSPs)
chr3 (119-226)||(41110459-41110567)
chr3 (117-226)||(21773778-21773888)
chr3 (117-222)||(24560213-24560319)
chr3 (117-226)||(30200229-30200343)
chr3 (119-226)||(25655110-25655218)
chr3 (129-226)||(14897984-14898082)
chr3 (121-226)||(28582647-28582753)
chr3 (118-226)||(651737-651837)
chr3 (129-216)||(220545-220633)
chr3 (121-192)||(24253894-24253966)
chr3 (118-192)||(34641162-34641237)
chr3 (129-226)||(46204894-46204992)
chr3 (119-226)||(18654738-18654847)
chr3 (159-226)||(2387898-2387965)
chr3 (121-208)||(24560373-24560461)
chr3 (137-192)||(26135969-26136025)
chr3 (118-188)||(28581183-28581254)
chr3 (121-226)||(37102286-37102383)
chr3 (123-192)||(41110323-41110393)
chr3 (177-226)||(10748435-10748484)
chr3 (129-226)||(12790381-12790478)
chr3 (129-192)||(55428551-55428615)
chr3 (119-226)||(9312609-9312715)
chr3 (110-195)||(6803370-6803456)
chr3 (151-216)||(41040098-41040164)
chr3 (123-216)||(43005887-43005981)
chr3 (116-223)||(54574502-54574605)
chr3 (117-187)||(24253717-24253789)
chr3 (130-222)||(27542073-27542166)
chr3 (139-191)||(52474088-52474141)
chr3 (121-192)||(18654600-18654672)
chr3 (119-189)||(17474381-17474452)
chr3 (129-187)||(27541939-27541998)
chr3 (159-226)||(46556182-46556249)
chr3 (129-188)||(51819147-51819206)
chr3 (118-175)||(5903546-5903604)
chr3 (129-226)||(10943752-10943850)
chr3 (165-222)||(52185060-52185118)
chr3 (121-189)||(25654971-25655039)
chr3 (159-208)||(30200127-30200176)
chr3 (159-208)||(37102188-37102237)
chr3 (121-225)||(40464010-40464115)
chr3 (129-221)||(52473923-52474016)
chr3 (117-161)||(44412357-44412401)
[»] chr6 (41 HSPs)
chr6 (121-223)||(33235951-33236054)
chr6 (124-216)||(19278186-19278278)
chr6 (117-226)||(14515469-14515577)
chr6 (123-226)||(2893632-2893736)
chr6 (119-226)||(16738134-16738241)
chr6 (124-226)||(30487443-30487546)
chr6 (121-226)||(12811118-12811224)
chr6 (119-207)||(10818227-10818316)
chr6 (124-226)||(4097650-4097754)
chr6 (122-217)||(10818364-10818459)
chr6 (132-226)||(31849121-31849216)
chr6 (119-192)||(9721136-9721210)
chr6 (124-226)||(2892741-2892844)
chr6 (124-226)||(21606982-21607085)
chr6 (119-192)||(9719029-9719103)
chr6 (119-199)||(1300785-1300866)
chr6 (122-208)||(9719186-9719273)
chr6 (180-226)||(5585440-5585486)
chr6 (161-226)||(6034210-6034275)
chr6 (119-187)||(30487304-30487373)
chr6 (119-224)||(1390317-1390424)
chr6 (121-226)||(15323225-15323331)
chr6 (121-189)||(15353364-15353433)
chr6 (117-192)||(4097231-4097307)
chr6 (121-214)||(9298636-9298735)
chr6 (178-226)||(13583777-13583825)
chr6 (129-188)||(19278042-19278102)
chr6 (119-226)||(23090993-23091101)
chr6 (129-191)||(23091131-23091195)
chr6 (121-187)||(14515648-14515715)
chr6 (124-226)||(33041473-33041576)
chr6 (118-192)||(33236122-33236197)
chr6 (119-161)||(9051736-9051778)
chr6 (119-187)||(665839-665907)
chr6 (159-208)||(1300658-1300707)
chr6 (160-197)||(2893013-2893050)
chr6 (133-174)||(14548629-14548670)
chr6 (116-191)||(9051529-9051605)
chr6 (121-208)||(9721293-9721381)
chr6 (159-191)||(21606883-21606915)
chr6 (182-226)||(34176397-34176441)
[»] scaffold0026 (2 HSPs)
scaffold0026 (124-215)||(1175-1267)
scaffold0026 (119-210)||(1552-1644)
[»] scaffold0096 (1 HSPs)
scaffold0096 (121-226)||(6584-6690)
[»] scaffold0262 (2 HSPs)
scaffold0262 (159-226)||(16434-16501)
scaffold0262 (118-187)||(16293-16363)
[»] scaffold0240 (1 HSPs)
scaffold0240 (117-188)||(17716-17786)
[»] scaffold0198 (1 HSPs)
scaffold0198 (124-208)||(3150-3235)
[»] scaffold0007 (1 HSPs)
scaffold0007 (129-192)||(242388-242452)
[»] scaffold0171 (1 HSPs)
scaffold0171 (165-214)||(15995-16044)
[»] scaffold0012 (1 HSPs)
scaffold0012 (129-192)||(184779-184843)
[»] scaffold0341 (1 HSPs)
scaffold0341 (160-226)||(18811-18876)
[»] scaffold0294 (1 HSPs)
scaffold0294 (177-226)||(15320-15369)


Alignment Details
Target: chr5 (Bit Score: 193; Significance: 1e-105; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 26414776 - 26414999
Alignment:
Q  1 cgcacaatatcatagtattttgaaagagaaaataccattttaacaatattaagttgatatatatttggaataagtagtaatttggcaatgagcttatatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26414776 cgcacaatatcatagtattttgaaagagaaaataccattttaaca---ttaagttgatatatatttggaataagtagtaatttggcaatgagcttatatt 26414872  T
Q  101 gagagacaaaataaaatctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatga 199  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26414873 gagagacaaaataaaatctaagggtgtgtttggattgagggtttaggaggagaagggaggggagggtttacttttcgtttttaaattacggactatatga 26414972  T
Q  200 catgtttttctaaaatatattaagtgt 226  Q
    |||||||||||||||||||||||||||    
T  26414973 catgtttttctaaaatatattaagtgt 26414999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 118 - 226
Target Start/End: Original strand, 13634708 - 13634817
Alignment:
Q  118 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    |||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||    
T  13634708 ctaagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaataacggactatataacatgtttttctaaaata 13634807  T
Q  217 tattaagtgt 226  Q
     |||| ||||    
T  13634808 aattatgtgt 13634817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 16938479 - 16938585
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 219  Q
    ||||||| |||||||||||||||||| |||||||||||||| |||||||  ||||| ||||||| ||||||||||||| |||||||| ||||||||| ||    
T  16938479 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaagttacggactatataacatgtttctctaaaataaat 16938578  T
Q  220 taagtgt 226  Q
    |||||||    
T  16938579 taagtgt 16938585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 119 - 226
Target Start/End: Complemental strand, 20147116 - 20147014
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatata 218  Q
    ||||||||| |||||||||||||||||| ||||||||||    |||||||||||||| ||||||||||||||| ||||| |||||||||||||||||| |    
T  20147116 taagggtgtgtttggattgagggtttaggaggggaaggg----agggtttacttttcatttttaaattacggattatat-acatgtttttctaaaataaa 20147022  T
Q  219 ttaagtgt 226  Q
    ||||||||    
T  20147021 ttaagtgt 20147014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 118 - 226
Target Start/End: Original strand, 7544133 - 7544242
Alignment:
Q  118 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    |||||||||| |||||||||||||||||| | |||||||||||| |||| | | ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  7544133 ctaagggtgtgtttggattgagggtttaggaagggaagggaggggagggctaaattttcttttttaaattacggactatataacatgtttttctaaaata 7544232  T
Q  217 tattaagtgt 226  Q
     || ||||||    
T  7544233 aatcaagtgt 7544242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 28279725 - 28279614
Alignment:
Q  117 tctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatg-tttttctaaaa 214  Q
    ||||||||||| ||||||||||| || || |||||||||||||| ||||||||||||||| ||||||||||| ||| ||||| ||||| |||||||||||    
T  28279725 tctaagggtgtgtttggattgagagtctataaggggaagggaggagagggtttacttttcctttttaaattatggaatatataacatgttttttctaaaa 28279626  T
Q  215 tatattaagtgt 226  Q
    || | |||||||    
T  28279625 taaactaagtgt 28279614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 2550588 - 2550490
Alignment:
Q  129 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| |||||||  | |||||||||| ||||||||||||| |||| |||| ||||    
T  2550588 tttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaagattcggactatataacatgtttttctataataaattacgtgt 2550490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 115 - 216
Target Start/End: Original strand, 40815291 - 40815393
Alignment:
Q  115 aatctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaa 213  Q
    ||||||||||||| |||||||||| | ||||| ||||||||||| | |||| |||||||||| |||||||||||| |||||||| |||||||||| ||||    
T  40815291 aatctaagggtgtgtttggattgaagatttaggaggggaagggaagagaggatttacttttcttttttaaattacagactatataacatgtttttataaa 40815390  T
Q  214 ata 216  Q
    |||    
T  40815391 ata 40815393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 1658065 - 1657985
Alignment:
Q  113 aaaatctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    ||||||||| ||||| ||||||| |||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||    
T  1658065 aaaatctaaaggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacggac 1657985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 14245084 - 14245160
Alignment:
Q  117 tctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    ||||||||||| |||||||||||||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||    
T  14245084 tctaagggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttttttaaattacggac 14245160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 226
Target Start/End: Original strand, 10476024 - 10476134
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgttttt-aaattacggactatat-gacatgtttttctaaaat 215  Q
    ||||||||| |||| ||||||||||||| ||||||||||| | ||||||||||||||| ||||| ||||||| || |||||  |||||||||||||||||    
T  10476024 taagggtgtgtttgaattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaaattacagattatatatacatgtttttctaaaat 10476123  T
Q  216 atattaagtgt 226  Q
    | |||||||||    
T  10476124 aaattaagtgt 10476134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 36363040 - 36363138
Alignment:
Q  129 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    |||||||||||||||||||||||||| |||||| || ||||| ||||| | |||||| |||| ||||||| |||||||||||||||||| || ||||||    
T  36363040 tttggattgagggtttagaaggggaatggaggggagagtttaattttcttgtttaaactacgtactatataacatgtttttctaaaataaatcaagtgt 36363138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 208
Target Start/End: Complemental strand, 13634954 - 13634867
Alignment:
Q  122 gggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 208  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||| ||||||||||||| ||  ||||| ||||||||    
T  13634954 gggtgtgtttggattgagggtttaggaggggaagggaggggaggggttacttttcatttttaaattacgaacactatgaaatgttttt 13634867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 119 - 222
Target Start/End: Original strand, 14681468 - 14681571
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatata 218  Q
    |||| |||| |||||||||||||||||| ||||||||| || || |||| | ||||| |||||||||||| || ||||| |||||||||| ||||||| |    
T  14681468 taagtgtgtgtttggattgagggtttaggaggggaaggaagtgatggttaaattttcttttttaaattacagattatataacatgtttttttaaaataaa 14681567  T
Q  219 ttaa 222  Q
    ||||    
T  14681568 ttaa 14681571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 4373810 - 4373704
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 219  Q
    ||||||| |||||||||||||||||| | |||||   || ||||| |||||||||| ||||||||||||||||||||| ||| ||||||  |||||| ||    
T  4373810 agggtgtgtttggattgagggtttaggaagggaaaatagtggaggatttacttttcttttttaaattacggactatataacaagttttttaaaaataaat 4373711  T
Q  220 taagtgt 226  Q
    |||||||    
T  4373710 taagtgt 4373704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 11756886 - 11756983
Alignment:
Q  129 tttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    |||||||||||||||||| |||||| ||  ||||| ||||  ||||  ||||||||||||| ||||||| |||||||| ||||||||| |||||||||    
T  11756886 tttggattgagggtttaggaggggagggatgggagagtttgtttttattttttaaattacgaactatataacatgtttctctaaaataaattaagtgt 11756983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 22022849 - 22022956
Alignment:
Q  123 ggtgtatttggattgagggtttagaaggggaagggagg-gagggttta---cttttcgtttttaaattacggactatatgacatgtttttctaaaatata 218  Q
    ||||| |||||||||||||||||| ||||||| ||||| |||| ||||    ||||  ||||||||||||||||||||| |||| ||||||||||||| |    
T  22022849 ggtgtgtttggattgagggtttaggaggggaatggaggagaggatttagttttttttttttttaaattacggactatataacatatttttctaaaataaa 22022948  T
Q  219 ttaagtgt 226  Q
    ||||||||    
T  22022949 ttaagtgt 22022956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 14245290 - 14245218
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||||||||  ||||| ||||||||||||||||    
T  14245290 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcatttttaaattacggac 14245218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 119 - 226
Target Start/End: Complemental strand, 36392395 - 36392288
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 217  Q
    |||||| || |||||||||||||||||| |||||||| ||| || | |||||  |||||||||||||||||||||||||| | ||  ||||||||||||     
T  36392395 taagggcgtgtttggattgagggtttaggaggggaagagagcggtgtgtttatatttcgtttttaaattacggactatataatat-attttctaaaatag 36392297  T
Q  218 attaagtgt 226  Q
    |||||||||    
T  36392296 attaagtgt 36392288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 119 - 197
Target Start/End: Original strand, 11436937 - 11437016
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatat 197  Q
    |||||| || |||||||||||||||||| |||||||||||| |||||| ||||||| | |||||||||||||||| ||||    
T  11436937 taagggcgtgtttggattgagggtttaggaggggaagggagaggagggcttactttccttttttaaattacggacaatat 11437016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 10650435 - 10650535
Alignment:
Q  129 tttggattgagggtttagaaggggaa--gggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtg 225  Q
    ||||||| |||| ||||| |||||||  ||||||| ||| |||||||||  ||||||||||||||||  ||||| |||||||||||||||| ||||||||    
T  10650435 tttggatggaggatttaggaggggaaaagggaggggaggatttactttttatttttaaattacggacactatgaaatgtttttctaaaataaattaagtg 10650534  T
Q  226 t 226  Q
    |    
T  10650535 t 10650535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 118 - 226
Target Start/End: Complemental strand, 15986871 - 15986762
Alignment:
Q  118 ctaagggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    |||||||||| |||||||||||||||||| ||||||||| || |||||| | ||||||  ||||||||||||| || || | | |||| ||| |||||||    
T  15986871 ctaagggtgtgtttggattgagggtttaggaggggaaggaagaggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaaata 15986772  T
Q  217 tattaagtgt 226  Q
     |||||||||    
T  15986771 aattaagtgt 15986762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 9856919 - 9856986
Alignment:
Q  159 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    ||||| ||||| ||||| ||||||||||| ||||||||| |||||||||||||||||| || ||||||    
T  9856919 gggagagtttagttttcttttttaaattaaggactatataacatgtttttctaaaataaatcaagtgt 9856986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 208
Target Start/End: Complemental strand, 7544378 - 7544292
Alignment:
Q  123 ggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgttttt 208  Q
    ||||| ||||||| |||||||||| ||||||||| |||| |||||||  ||||| ||||||||||||||||  ||||| ||||||||    
T  7544378 ggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttggttttcatttttaaattacggacactatgaaatgttttt 7544292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 226
Target Start/End: Original strand, 10204573 - 10204682
Alignment:
Q  118 ctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    |||||||||| ||||||| |||||||||| ||||||||||||| ||||| | ||||||  ||||||||||||  || || | | |||| ||| |||||||    
T  10204573 ctaagggtgtgtttggatcgagggtttaggaggggaagggaggtgagggctcacttttattttttaaattaccaacaatgtaaaatgtctttttaaaata 10204672  T
Q  217 tattaagtgt 226  Q
     |||||||||    
T  10204673 aattaagtgt 10204682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 11419360 - 11419303
Alignment:
Q  165 gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 222  Q
    ||||||||||| ||||||||||||||  ||||| |||||||||||||||||| |||||    
T  11419360 gtttacttttcttttttaaattacgggttatataacatgtttttctaaaataaattaa 11419303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 226
Target Start/End: Complemental strand, 33744440 - 33744331
Alignment:
Q  118 ctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    ||||||||||||||||||||||||||||| ||  ||||||| ||||||| | ||||||   |||||||||||| || ||   | |||||||| |||||||    
T  33744440 ctaagggtgtatttggattgagggtttaggagatgaagggaggggagggctcacttttatattttaaattacgaacaattcaaaatgtttttttaaaata 33744341  T
Q  217 tattaagtgt 226  Q
     |||||||||    
T  33744340 aattaagtgt 33744331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 34980812 - 34980916
Alignment:
Q  123 ggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 221  Q
    ||||| |||||||||| ||||||| |||||||||||||| |||||| ||||||  ||||||||||||| || |  | | || ||||| ||||||| ||||    
T  34980812 ggtgtgtttggattgaaggtttaggaggggaagggagggaagggttcacttttaatttttaaattacgaacaacgtaaaatatttttttaaaataaatta 34980911  T
Q  222 agtgt 226  Q
    |||||    
T  34980912 agtgt 34980916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 36363268 - 36363205
Alignment:
Q  129 tttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacgga 191  Q
    ||||||| |||||||||| ||||||||||||| ||| ||| ||||||| |||||||||||||||    
T  36363268 tttggatggagggtttaggaggggaagggaggagagagttcacttttcatttttaaattacgga 36363205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 42681450 - 42681549
Alignment:
Q  123 ggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgttttta-----aattacggactatatgacatgtttttctaaaata 216  Q
    ||||| |||||||||||||||||  ||||||| |||||| ||| |||||||||  |||||      ||||||||||||||| ||||||||||||||||||    
T  42681450 ggtgtgtttggattgagggtttaagaggggaaaggaggggaggatttactttttttttttttttttaattacggactatataacatgtttttctaaaata 42681549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 10072845 - 10072787
Alignment:
Q  166 tttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagt 224  Q
    |||||||||| |||||||||||| |||  ||| |||||||||||||||||| |||||||    
T  10072845 tttacttttcttttttaaattaccgacggtataacatgtttttctaaaataaattaagt 10072787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 208
Target Start/End: Complemental strand, 16938725 - 16938635
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgttttt 208  Q
    ||||||||| ||||||| |||||||||| || |||| |||||| ||||||||  |||| |||||||||||| |||  ||||| ||||||||    
T  16938725 taagggtgtgtttggatggagggtttaggagaggaatggaggggagggtttagatttcatttttaaattactgacactatgaaatgttttt 16938635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 10476272 - 10476203
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacg 189  Q
    ||||||| ||||||| |||||||||| ||||||||||| ||||| |||||||| |  |||||||||||||    
T  10476272 agggtgtgtttggatggagggtttaggaggggaagggaggggagtgtttacttataatttttaaattacg 10476203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 158
Target Start/End: Complemental strand, 11437186 - 11437149
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaaggga 158  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  11437186 agggtgtttttggattgagggtttagaaggggaaggga 11437149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 11757144 - 11757075
Alignment:
Q  124 gtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 192  Q
    |||| ||||||| |||||||||  |||||||||||||| ||||||||  |||| ||||||||||||||||    
T  11757144 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttagatttcatttttaaattacggac 11757075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 8503017 - 8502973
Alignment:
Q  182 aaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    |||||||||||||||| ||||| |||||||||||| |||||||||    
T  8503017 aaattacggactatataacatgcttttctaaaataaattaagtgt 8502973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 222
Target Start/End: Complemental strand, 9798826 - 9798754
Alignment:
Q  151 ggaagggagggaggg-tttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 222  Q
    |||||||||||| || |||||||||| |||| ||||||| || ||||| |||||||||||| ||||| |||||    
T  9798826 ggaagggagggaaggatttacttttctttttaaaattacagattatataacatgtttttcttaaataaattaa 9798754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 33744193 - 33744265
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 192  Q
    ||||||| ||||||| ||||||| ||  || |||||||||| |||||||||||||| ||||||||||| ||||    
T  33744193 agggtgtgtttggatggagggttaaggcggagaagggaggggagggtttacttttcttttttaaattatggac 33744265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 37606940 - 37606995
Alignment:
Q  165 gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 221  Q
    ||||||||||||||||||||||| ||||||||| | |||||||| ||||||| ||||    
T  37606940 gtttacttttcgtttttaaattaaggactatat-aaatgtttttttaaaataaatta 37606995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 191
Target Start/End: Complemental strand, 10650658 - 10650587
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacgga 191  Q
    ||||||| ||||||||||  |||| | ||||||||||||| ||  |||||||||| ||||||||||||||||    
T  10650658 agggtgtgtttggattgaaagtttgggaggggaagggaggagaaagtttactttttgtttttaaattacgga 10650587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 16502034 - 16501928
Alignment:
Q  123 ggtgtatttggattgagggtttagaaggggaagggagggagggt--ttacttttcgtttttaaattacggactatatgacat-gtttttctaaaatatat 219  Q
    ||||| |||||||||||||||||| |||| ||| ||||| | |   ||||||||  |||||||||||||||||||||  |||  ||||||||||||| ||    
T  16502034 ggtgtgtttggattgagggtttaggagggaaagagagggggagaaattacttttattttttaaattacggactatatatcatattttttctaaaataaat 16501935  T
Q  220 taagtgt 226  Q
     ||||||    
T  16501934 caagtgt 16501928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 40305912 - 40305869
Alignment:
Q  118 ctaagggtgtatttggattgagggtttagaaggggaagggaggg 161  Q
    |||||||||| |||||||||||||||||| ||| ||||||||||    
T  40305912 ctaagggtgtgtttggattgagggtttaggaggagaagggaggg 40305869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 2550391 - 2550445
Alignment:
Q  159 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaa 213  Q
    ||||||||||||||||| |||||||||||| |||  ||||| |||||||| ||||    
T  2550391 gggagggtttacttttcatttttaaattacagacactatgatatgtttttttaaa 2550445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 8502833 - 8502907
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    ||||||||| ||||||| || ||||||  | ||||| ||| ||||||||| ||||||| ||||||||||||||||    
T  8502833 taagggtgtgtttggatggatggtttatgaagggaatggatgggagggttcacttttcatttttaaattacggac 8502907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 20513682 - 20513612
Alignment:
Q  120 aagggtgtatttggattgagggttta-gaaggggaagggagggagggtttacttttcgtttttaaattacg 189  Q
    |||||||| ||||||||||||||||| |||| | || | ||| ||| |||||||||| |||||||||||||    
T  20513682 aagggtgtgtttggattgagggtttaggaagcgaaaagaaggaaggatttacttttcttttttaaattacg 20513612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 158
Target Start/End: Complemental strand, 5688634 - 5688597
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaaggga 158  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  5688634 agggtgtgtttggattgagggtttaggaggggaaggga 5688597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 146
Target Start/End: Original strand, 35176756 - 35176789
Alignment:
Q  113 aaaatctaagggtgtatttggattgagggtttag 146  Q
    |||| |||||||||||||||||||||||||||||    
T  35176756 aaaaactaagggtgtatttggattgagggtttag 35176789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 37551453 - 37551485
Alignment:
Q  165 gtttacttttcgtttttaaattacggactatat 197  Q
    ||||||||||||||||||||||| |||||||||    
T  37551453 gtttacttttcgtttttaaattatggactatat 37551485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 37551649 - 37551585
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaa 184  Q
    ||||||| ||||||| |||||||||  |||| ||||||| ||| |||||||||||| ||||||||    
T  37551649 agggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaa 37551585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 37654283 - 37654315
Alignment:
Q  165 gtttacttttcgtttttaaattacggactatat 197  Q
    ||||||||||||||||||||||| |||||||||    
T  37654283 gtttacttttcgtttttaaattatggactatat 37654315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 37654479 - 37654415
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaa 184  Q
    ||||||| ||||||| |||||||||  |||| ||||||| ||| |||||||||||| ||||||||    
T  37654479 agggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaa 37654415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 161
Target Start/End: Original strand, 40305670 - 40305710
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg 161  Q
    ||||||| ||||||| |||||||||| ||||||||||||||    
T  40305670 agggtgtgtttggatggagggtttaggaggggaagggaggg 40305710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 3e-38; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 119 - 226
Target Start/End: Complemental strand, 39856111 - 39856003
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 217  Q
    ||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||     
T  39856111 taagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataa 39856012  T
Q  218 attaagtgt 226  Q
    |||||||||    
T  39856011 attaagtgt 39856003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 226
Target Start/End: Complemental strand, 13771192 - 13771084
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 217  Q
    ||||||||| ||| |||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||     
T  13771192 taagggtgtgtttagattgagggtttaggaggggaagggaggtgagagtttacttttcgtttttaaattacggactatataacatgtttttttaaaataa 13771093  T
Q  218 attaagtgt 226  Q
    |||||||||    
T  13771092 attaagtgt 13771084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 114 - 226
Target Start/End: Complemental strand, 1051749 - 1051636
Alignment:
Q  114 aaatctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaa 212  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||| |||| |||| ||||| ||||||||||||| ||||||| || |||||||||||    
T  1051749 aaatctaagggtgtgtttggattgagggtttaggaggggaagggaggagaggatttatttttcttttttaaattacgaactatataacctgtttttctaa 1051650  T
Q  213 aatatattaagtgt 226  Q
    |||| |||||||||    
T  1051649 aataaattaagtgt 1051636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 33655349 - 33655246
Alignment:
Q  124 gtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 222  Q
    |||| |||||||||||||||||| |||||||| |||| ||||||||||||||| ||||||||||| || |||||| |||||||||||||||||| |||||    
T  33655349 gtgtgtttggattgagggtttaggaggggaagagaggcgagggtttacttttcttttttaaattatgggctatataacatgtttttctaaaataaattaa 33655250  T
Q  223 gtgt 226  Q
    ||||    
T  33655249 gtgt 33655246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 222
Target Start/End: Original strand, 47390855 - 47390957
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 219  Q
    ||||||| ||||||||||||| |||| |||||||||||| |||||||||||||||| ||||||||||| | ||||||| |||||||||||||||||| ||    
T  47390855 agggtgtgtttggattgaggggttaggaggggaagggagtggagggtttacttttcttttttaaattatgaactatataacatgtttttctaaaatacat 47390954  T
Q  220 taa 222  Q
    |||    
T  47390955 taa 47390957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 41497172 - 41497095
Alignment:
Q  150 gggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  41497172 gggaagggaggggagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaagtgt 41497095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 25887192 - 25887298
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 219  Q
    ||||||| |||||||||||||||||  |||||||||||||| ||| |||  ||||| ||| ||||| ||||||||||| |||||||||||||||||| ||    
T  25887192 agggtgtgtttggattgagggtttatgaggggaagggaggggaggatttgtttttcttttataaatcacggactatataacatgtttttctaaaataaat 25887291  T
Q  220 taagtgt 226  Q
    |||||||    
T  25887292 taagtgt 25887298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 34228563 - 34228456
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacgga-ctatatgacatgtttttctaaaatata 218  Q
    ||||||| |||| ||||| ||||||| ||| |||||||||| ||| |||||||||| |||| |||||||||| |||||| |||||||||||||||||| |    
T  34228563 agggtgtgtttgaattgaaggtttaggaggagaagggaggggaggatttacttttcattttaaaattacggaactatataacatgtttttctaaaataaa 34228464  T
Q  219 ttaagtgt 226  Q
    ||||||||    
T  34228463 ttaagtgt 34228456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 117 - 226
Target Start/End: Original strand, 37925837 - 37925947
Alignment:
Q  117 tctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaat 215  Q
    ||||||||||| |||||||||||||||||| ||||||||||| ||||||||| ||||||  ||||||||||||| || || | | |||||||| | ||||    
T  37925837 tctaagggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttattttttaaattacgaacaatgtaaaatgttttttttaaat 37925936  T
Q  216 atattaagtgt 226  Q
    | |||||||||    
T  37925937 agattaagtgt 37925947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 40196769 - 40196670
Alignment:
Q  117 tctaagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    |||||||||||||||||||||||||||| | ||||||          ||||||||||| |||||||||||||||| ||||| ||||||||||||||||||    
T  40196769 tctaagggtgtatttggattgagggtttgggagggga----------ggtttactttttgtttttaaattacggaatatataacatgtttttctaaaata 40196680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 43230275 - 43230341
Alignment:
Q  159 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtg 225  Q
    ||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||| ||||||||    
T  43230275 gggagggtttacttttcttttttaaattacggattatataacatgtttttctaaaataaattaagtg 43230341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 122 - 226
Target Start/End: Complemental strand, 31571713 - 31571606
Alignment:
Q  122 gggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatg--tttttctaaaatata 218  Q
    |||||| |||||||||||||||||| |||||||| ||||| || ||||||||||| |||||||||||||||| |||| |||||  |||||  |||| |||    
T  31571713 gggtgtgtttggattgagggtttaggaggggaagcgaggggagagtttacttttcttttttaaattacggaccatataacatgctttttttaaaaaaata 31571614  T
Q  219 ttaagtgt 226  Q
    ||||||||    
T  31571613 ttaagtgt 31571606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 207
Target Start/End: Original strand, 4833529 - 4833618
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttt 207  Q
    ||||||| | ||||||| |||||||||| |||||||||||||| |||||||||||||| |||||||||||| |||  ||||| |||||||    
T  4833529 taagggtatgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacagacactatgaaatgtttt 4833618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 17852910 - 17852977
Alignment:
Q  159 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    ||||||| ||||||||| ||||||||||||||| || || |||||||||||||||||| |||||||||    
T  17852910 gggagggattacttttcttttttaaattacggattaaataacatgtttttctaaaataaattaagtgt 17852977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 18231834 - 18231762
Alignment:
Q  117 tctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattac 188  Q
    ||||||||||| ||||||| ||| |||||| ||||||||||| |||||| |||||||||| ||||||||||||    
T  18231834 tctaagggtgtgtttggatggagcgtttaggaggggaagggaggggaggatttacttttcatttttaaattac 18231762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 24970407 - 24970303
Alignment:
Q  123 ggtgtatttggattgagggtttagaaggggaagggagggagg-gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 221  Q
    ||||| |||||||||||||||||| ||||    ||||||| | ||||  ||||| ||||||||||| ||| ||||| |||||||||||||||||| ||||    
T  24970407 ggtgtgtttggattgagggtttaggagggtttaggagggaagagtttgtttttcttttttaaattatggattatataacatgtttttctaaaataaatta 24970308  T
Q  222 agtgt 226  Q
    |||||    
T  24970307 agtgt 24970303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 34235239 - 34235145
Alignment:
Q  129 tttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatg-tttttctaaaatatattaagtgt 226  Q
    |||||||||||||||||| ||| ||  |||||  | ||||||||||| ||||||||||||||| ||||| ||||| ||||||||||||| |||||||||    
T  34235239 tttggattgagggtttaggaggaga--ggagg--gtgtttacttttcatttttaaattacggattatataacatgttttttctaaaataaattaagtgt 34235145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 40196532 - 40196604
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggac 192  Q
    ||||||| ||||||| |||||||| | |||||||||||| |||||||||||||||| ||||| ||||||||||    
T  40196532 agggtgtgtttggatggagggtttgggaggggaagggagaggagggtttacttttcatttttgaattacggac 40196604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 41496957 - 41497045
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 208  Q
    ||||||| ||||||| |||||||||| ||||||||||| |||| | |||||||||  |||||||||||||||| ||| || ||||||||    
T  41496957 agggtgtgtttggatggagggtttaggaggggaagggaggggatgatttactttttatttttaaattacggacaataggaaatgttttt 41497045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 48881558 - 48881630
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    ||||||| ||||||| |||||||||| ||||||||||| |||| || ||||||||| ||||||||||||||||    
T  48881558 agggtgtgtttggatggagggtttaggaggggaagggaggggatggcttacttttcttttttaaattacggac 48881630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 23029537 - 23029482
Alignment:
Q  161 gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    ||||||||||||||| |||||||||||  |||||||| ||||||||||||||||||    
T  23029537 gagggtttacttttcttttttaaattatagactatataacatgtttttctaaaata 23029482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 191
Target Start/End: Original strand, 36267553 - 36267624
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacgga 191  Q
    ||||||| ||||||| |||||||||| ||||||||||| ||||||| ||| ||||| |||||||||||||||    
T  36267553 agggtgtgtttggatggagggtttaggaggggaagggaggggagggcttagttttcttttttaaattacgga 36267624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 41008190 - 41008289
Alignment:
Q  129 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatg-tttttctaaaatatattaagtgt 226  Q
    ||||||||||||||||   |||||||||||||| ||  |||  ||||| ||||||||||||||||||||| ||||| ||||| ||||||| |||||||||    
T  41008190 tttggattgagggtttgagaggggaagggaggggagaatttgtttttcttttttaaattacggactatataacatgttttttttaaaataaattaagtgt 41008289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 216
Target Start/End: Original strand, 26365770 - 26365864
Alignment:
Q  124 gtgtatttggattgagggtttagaagggg-aagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    |||| |||||||||||||||||| ||||| |||||||  ||| ||||||||||| |||||| |||||  ||||||| |||| |||||||||||||    
T  26365770 gtgtgtttggattgagggtttaggagggggaagggagttgagagtttacttttcttttttatattacaaactatataacatatttttctaaaata 26365864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 188
Target Start/End: Original strand, 30592251 - 30592321
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaaggg-agggagggtttacttttcgtttttaaattac 188  Q
    ||||||||||||||||| |||| ||||| |||| ||||| |||||||| ||||||||| ||||||||||||    
T  30592251 taagggtgtatttggatggaggatttaggagggaaagggaagggagggcttacttttcttttttaaattac 30592321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 226
Target Start/End: Original strand, 33519045 - 33519154
Alignment:
Q  118 ctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    ||||||| || ||||||| |||| ||||| ||||||||||| ||||||| | ||||||  ||||||||||||| || |||| | |||||||| | |||||    
T  33519045 ctaagggagtgtttggatggaggttttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatataaaatgtttttttgaaata 33519144  T
Q  217 tattaagtgt 226  Q
     |||||||||    
T  33519145 aattaagtgt 33519154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 37417871 - 37417771
Alignment:
Q  117 tctaagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    ||||||||||| |||||||||||||||||| |||||| ||         |||||||||| ||||||||| ||||||||||| ||||||||||| ||| ||    
T  37417871 tctaagggtgtgtttggattgagggtttaggaggggatgg---------tttacttttcatttttaaataacggactatataacatgtttttcaaaatta 37417781  T
Q  217 tattaagtgt 226  Q
      ||||||||    
T  37417780 agttaagtgt 37417771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 208
Target Start/End: Complemental strand, 42306571 - 42306486
Alignment:
Q  124 gtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgttttt 208  Q
    |||| |||||||||||||||||| |||||||  ||||| | |||||| ||||| ||||||||||||||||  ||||| ||||||||    
T  42306571 gtgtgtttggattgagggtttaggaggggaattgaggggatggtttaattttcatttttaaattacggacactatgaaatgttttt 42306486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 13770948 - 13771020
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    ||||||| |||||||||||| ||||| ||||||||||| |||||| ||||||| |  ||||||||||||||||    
T  13770948 agggtgtgtttggattgaggatttaggaggggaagggaggggaggatttacttattatttttaaattacggac 13771020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 188
Target Start/End: Complemental strand, 33519292 - 33519224
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattac 188  Q
    ||||||| ||||||| |||||||||| ||||||||||| ||||||| ||||||||| | ||||||||||    
T  33519292 agggtgtgtttggatggagggtttaggaggggaagggaggggagggattacttttcttctttaaattac 33519224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 28074100 - 28074175
Alignment:
Q  118 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 192  Q
    |||||||||| |||||||||| ||||||| |||||||||||||| ||   | ||||||| ||||||||||||||||    
T  28074100 ctaagggtgtgtttggattgaaggtttaggaggggaagggaggggagaactcacttttcttttttaaattacggac 28074175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 214
Target Start/End: Complemental strand, 18795835 - 18795745
Alignment:
Q  124 gtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaa 214  Q
    |||| ||||||||||| ||||||||||||||||  |||| || ||  ||||| ||||||||||||| || |||| | |||||||| |||||    
T  18795835 gtgtgtttggattgagagtttagaaggggaaggaggggaaggcttgattttcttttttaaattacgaacaatataaaatgtttttttaaaa 18795745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 40282205 - 40282263
Alignment:
Q  129 tttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaatt 186  Q
    |||||||||||||||||| |||||||||||| |||||||||  ||||| ||||||||||    
T  40282205 tttggattgagggtttaggaggggaagggagaggagggtttgattttcttttttaaatt 40282263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 208
Target Start/End: Original strand, 45940658 - 45940744
Alignment:
Q  123 ggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgttttt 208  Q
    ||||| ||||||| || |||||||||||||||||||||| |  ||||||||||  |||||| |||||||||  ||||| ||||||||    
T  45940658 ggtgtgtttggatggaaggtttagaaggggaagggagggcaaagtttactttttatttttatattacggacactatgaaatgttttt 45940744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 47391102 - 47391028
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    ||||||||| ||||||| |||||||||  ||||||||||| ||||| ||||  ||||| ||||||||||||||||    
T  47391102 taagggtgtgtttggatggagggtttaagaggggaagggaggggagagtttggttttcatttttaaattacggac 47391028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 10315652 - 10315709
Alignment:
Q  159 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    |||||| |||||||||| |||||||||| | |||||||| |||| |||||||||||||    
T  10315652 gggaggatttacttttcttttttaaatttcagactatataacatatttttctaaaata 10315709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 31364285 - 31364237
Alignment:
Q  124 gtgtatttggattgagggtttagaaggggaagggagggagggtttacttt 173  Q
    |||| |||||||||||||||||| ||||||||||| ||||||||||||||    
T  31364285 gtgtgtttggattgagggtttaggaggggaaggga-ggagggtttacttt 31364237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 42306376 - 42306437
Alignment:
Q  162 agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaag 223  Q
    |||||||  ||||| |||||||||||| |||||||| |||||| ||||||||||| ||||||    
T  42306376 agggtttgattttcttttttaaattaccgactatataacatgtatttctaaaataaattaag 42306437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 33655148 - 33655196
Alignment:
Q  160 ggagggtttacttttcgtttttaaattacggactatatgacatgttttt 208  Q
    |||||||||||||||| ||||||||||||||||  ||||| ||||||||    
T  33655148 ggagggtttacttttcatttttaaattacggacactatgaaatgttttt 33655196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 161
Target Start/End: Complemental strand, 36267797 - 36267757
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg 161  Q
    ||||||| |||||||||||||||||| ||||||||||||||    
T  36267797 agggtgtgtttggattgagggtttaggaggggaagggaggg 36267757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 48015453 - 48015378
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggact 193  Q
    ||||||| | ||||||| ||||| |||| ||||||||||||  ||| | |||||||||||||||||||||| ||||    
T  48015453 taagggtttgtttggatggagggattaggaggggaagggagatgagagcttacttttcgtttttaaattacagact 48015378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 35422198 - 35422136
Alignment:
Q  131 tggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggac 192  Q
    |||||||||||||||| |||| ||  ||| |||||||||||||||| |||| |||||||||||    
T  35422198 tggattgagggtttaggagggaaatagagtggagggtttacttttctttttaaaattacggac 35422136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 4835477 - 4835550
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacgga 191  Q
    ||||||||| ||| |||||||||||||| || | |||||| ||| | | ||||||||| |||||||||||||||    
T  4835477 taagggtgtgtttagattgagggtttaggagagaaagggaggggtgtgcttacttttcttttttaaattacgga 4835550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 25887444 - 25887368
Alignment:
Q  113 aaaatctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacg 189  Q
    |||| |||||||||| ||||| |  ||||||||| ||||||||||| ||||| |||||| |||| |||||||||||||    
T  25887444 aaaaactaagggtgtgtttgg-tgaagggtttaggaggggaagggaggggagagtttacatttcatttttaaattacg 25887368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 156
Target Start/End: Complemental strand, 48881795 - 48881758
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagg 156  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  48881795 taagggtgtgtttggattgagggtttaggaggggaagg 48881758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 119 - 226
Target Start/End: Complemental strand, 39436 - 39328
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 217  Q
    ||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| | ||||||||||||||||||     
T  39436 taagggtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttcttttttaaattacggactatgtaacatgtttttctaaaataa 39337  T
Q  218 attaagtgt 226  Q
    |||||||||    
T  39336 attaagtgt 39328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 39186 - 39275
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg--agggtttacttttcgtttttaaattacggactatatgacatgttttt 208  Q
    ||||||| ||||||| |||||||||| |||||||  |||||  |||||||||||||| ||||||||||||||||  ||||| ||||||||    
T  39186 agggtgtgtttggatggagggtttaggaggggaaatgagggggagggtttacttttcatttttaaattacggacactatgaaatgttttt 39275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 1e-34; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 119 - 226
Target Start/End: Original strand, 54935065 - 54935174
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggaggg--agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    ||||||||| |||||||||||||||||| ||||||||||||||  |||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||    
T  54935065 taagggtgtgtttggattgagggtttaggaggggaagggagggggagggtttacttttcttttttaaattacgaactatataacatgtttttctaaaata 54935164  T
Q  217 tattaagtgt 226  Q
     |||||||||    
T  54935165 aattaagtgt 54935174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 118 - 226
Target Start/End: Complemental strand, 31348568 - 31348459
Alignment:
Q  118 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    |||||||||| ||||||||||| |||||| |||||||||||||| |||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||    
T  31348568 ctaagggtgtgtttggattgagagtttaggaggggaagggaggggagggtttacttttcttttttaaataacggactatataacatgtttttctaaaata 31348469  T
Q  217 tattaagtgt 226  Q
     |||| ||||    
T  31348468 aattatgtgt 31348459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 119 - 226
Target Start/End: Original strand, 54320433 - 54320540
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatata 218  Q
    ||||||||| |||||||||||||||||| |||| ||||||||||||||||  ||||| |||||||||||| ||||||||  ||||||||||||||||| |    
T  54320433 taagggtgtgtttggattgagggtttaggagggaaagggagggagggtttgattttcttttttaaattaccgactatatatcatgtttttctaaaataaa 54320532  T
Q  219 ttaagtgt 226  Q
    ||||||||    
T  54320533 ttaagtgt 54320540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 1968605 - 1968507
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggagggagg-gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    ||||||||| |||||||||||||||||| ||||||||||||||| | ||||| ||||| ||||||||||||||||||||| | ||||||||||||||||    
T  1968605 taagggtgtgtttggattgagggtttaggaggggaagggagggaagagtttaattttcatttttaaattacggactatataatatgtttttctaaaata 1968507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 27735753 - 27735851
Alignment:
Q  129 tttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    ||||||| |||||||||| ||||||||||| | ||||||||| ||||| ||||||||||||||||||||| |||||||||| ||||||| |||||||||    
T  27735753 tttggatcgagggtttaggaggggaagggaagagagggtttaattttcatttttaaattacggactatataacatgtttttttaaaataaattaagtgt 27735851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 226
Target Start/End: Original strand, 37711136 - 37711249
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaaggga------gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaa 212  Q
    ||||||||| |||||||||||||||||| |||||||||||      ||||||||||  ||||| ||||||||||||||||||||| |||||||| |||||    
T  37711136 taagggtgtgtttggattgagggtttaggaggggaagggaagggaggggagggtttgtttttcttttttaaattacggactatataacatgtttctctaa 37711235  T
Q  213 aatatattaagtgt 226  Q
    |||| |||||||||    
T  37711236 aataaattaagtgt 37711249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 124 - 225
Target Start/End: Complemental strand, 46007942 - 46007840
Alignment:
Q  124 gtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 222  Q
    |||| |||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||| | |||||||| || ||||||| ||||||| |||||    
T  46007942 gtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattgcagactatataacttgtttttgtaaaataaattaa 46007843  T
Q  223 gtg 225  Q
    |||    
T  46007842 gtg 46007840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 47433953 - 47433846
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactat-atgacatgtttttctaaaatata 218  Q
    ||||||| ||||| |||| ||||||| |||||||||||| |||||||||||||||| |||||||||||| |||||| || |||||||||| ||||||| |    
T  47433953 agggtgtgtttgggttgacggtttaggaggggaagggagaggagggtttacttttcttttttaaattacagactataataacatgtttttttaaaataaa 47433854  T
Q  219 ttaagtgt 226  Q
    ||||||||    
T  47433853 ttaagtgt 47433846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 26166937 - 26167043
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 219  Q
    ||||||| |||||||||||||||||| ||||||| |||||| || ||||  ||||| |||||||||||| |||||||| |||||||| ||||||||| ||    
T  26166937 agggtgtgtttggattgagggtttaggaggggaatggaggggagagtttgtttttcttttttaaattacagactatataacatgtttctctaaaataaat 26167036  T
Q  220 taagtgt 226  Q
    |||||||    
T  26167037 taagtgt 26167043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 137 - 226
Target Start/End: Complemental strand, 49735695 - 49735606
Alignment:
Q  137 gagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    |||||||||| ||||||||||||||  |||||| ||||| |||||||| |||||||||||| |||||||||||||||||| || ||||||    
T  49735695 gagggtttaggaggggaagggaggggaggtttagttttcttttttaaactacggactatataacatgtttttctaaaataaatcaagtgt 49735606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 49735465 - 49735540
Alignment:
Q  118 ctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    |||||||||| |||||||||||||||||| ||||||||||| ||||||||| ||||||| ||||||||||||||||    
T  49735465 ctaagggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttcatttttaaattacggac 49735540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 222
Target Start/End: Original strand, 45741890 - 45741992
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 219  Q
    ||||||| |||||||||||||||||| ||||||| | | | |||| |||||||||  ||||||||||||||||||||| || ||||||||||||||| ||    
T  45741890 agggtgtgtttggattgagggtttaggaggggaatgaatgtgaggatttacttttgttttttaaattacggactatataacttgtttttctaaaataaat 45741989  T
Q  220 taa 222  Q
    |||    
T  45741990 taa 45741992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 226
Target Start/End: Original strand, 56135746 - 56135855
Alignment:
Q  118 ctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    |||||||||| |||||||||||||||||| ||||||||||| ||||||||| | ||||  ||||||||||||| || || | | |||||||| |||||||    
T  56135746 ctaagggtgtgtttggattgagggtttaggaggggaagggaggggagggttcatttttattttttaaattacgaacaatgtaaaatgtttttttaaaata 56135845  T
Q  217 tattaagtgt 226  Q
     |||||||||    
T  56135846 aattaagtgt 56135855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 226
Target Start/End: Complemental strand, 5731077 - 5730968
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttc-gtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    |||| |||| |||| ||||||||||||| ||||||||||| ||||| ||||  ||| |  ||||||||||||||||||||| |||||||| |||||||||    
T  5731077 taagagtgtgtttgaattgagggtttaggaggggaagggaggggagagtttgttttactttttttaaattacggactatataacatgtttctctaaaata 5730978  T
Q  217 tattaagtgt 226  Q
     |||||||||    
T  5730977 aattaagtgt 5730968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 215
Target Start/End: Original strand, 29798286 - 29798383
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaat 215  Q
    ||||||||| |||||||||| ||||||| |||||||| ||| |||  ||||||||||  |||||||||||| |||||||| |||||||||||| ||||    
T  29798286 taagggtgtgtttggattgatggtttaggaggggaagagagaggatagtttacttttattttttaaattacagactatataacatgtttttcttaaat 29798383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 214
Target Start/End: Complemental strand, 2248043 - 2247952
Alignment:
Q  123 ggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaa 214  Q
    ||||| |||||||||||||||||| ||| |||| || ||||| ||||||||||| |||||||||||| || ||||| ||||||||||||||||    
T  2248043 ggtgtgtttggattgagggtttaggaggagaagtgaagggagagtttacttttcttttttaaattacaga-tatataacatgtttttctaaaa 2247952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 54935313 - 54935241
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    ||||||| ||||||| |||||||||| ||||||||||| ||||||||||| ||||| ||||||||||||||||    
T  54935313 agggtgtgtttggatggagggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggac 54935241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 54576324 - 54576399
Alignment:
Q  118 ctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    |||| ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||| |||||| |||||||||    
T  54576324 ctaaaggtgtgtttggatggagggtttagaaggggaagggaggggagggcttacttttcttttttagattacggac 54576399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 35248738 - 35248792
Alignment:
Q  172 tttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    |||| ||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  35248738 tttcttttttaaattacggactatataacatgtttttctaaaataaattaagtgt 35248792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 226
Target Start/End: Original strand, 6891373 - 6891466
Alignment:
Q  134 attgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    |||||||||||||||||||||| ||||| |  ||||| ||||| |||||||| |||  | ||||| |||||||||||||||||| |||||||||    
T  6891373 attgagggtttagaaggggaagagaggggatagtttatttttcttttttaaaatacaaattatataacatgtttttctaaaataaattaagtgt 6891466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 122 - 226
Target Start/End: Original strand, 36151577 - 36151682
Alignment:
Q  122 gggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatt 220  Q
    ||||||||||| ||||||||||| | |||||||| || | |||||||||  | |  ||| |||||||| |||||||| |||||||||||||||||| |||    
T  36151577 gggtgtatttgaattgagggttttggaggggaagagatgagagggtttatgtatattttataaattacagactatataacatgtttttctaaaataaatt 36151676  T
Q  221 aagtgt 226  Q
    ||||||    
T  36151677 aagtgt 36151682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 45132739 - 45132662
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatat 197  Q
    ||||||| |||| |||||| |||||| |||||||| |||| || |||||||||||| |||||||||||||||||||||    
T  45132739 agggtgtgtttgaattgagagtttaggaggggaagagaggagatggtttacttttcttttttaaattacggactatat 45132662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 216
Target Start/End: Complemental strand, 24565572 - 24565492
Alignment:
Q  137 gagggtttagaaggggaagggagggaggg-tttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    |||||||||| ||||||||||||||| |  ||||| |||| |||||||||||||| |||||| ||||||||||||| ||||    
T  24565572 gagggtttaggaggggaagggagggaagaatttacatttcttttttaaattacgggctatataacatgtttttctataata 24565492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 37711367 - 37711295
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    ||||||| ||||||| |||||||||| ||||||||||| |||||||||||  |||| ||||||||||||||||    
T  37711367 agggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagatttcatttttaaattacggac 37711295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 45742138 - 45742046
Alignment:
Q  117 tctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgttttt 208  Q
    ||||||||||| |||||||  |||||||||  ||| ||||||||| || ||||||||||| ||||||||||||||||  ||||| ||||||||    
T  45742138 tctaagggtgtgtttggatgaagggtttaggcgggaaagggaggggagagtttacttttcatttttaaattacggacactatgaaatgttttt 45742046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 54320678 - 54320606
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||||||||  ||||  ||||||||||||||||    
T  54320678 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgattttaatttttaaattacggac 54320606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 6938289 - 6938358
Alignment:
Q  129 tttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatat 197  Q
    |||||||||| | ||||| ||||||||||||| |||| |||| ||||| |||||||||||||||||||||    
T  6938289 tttggattgatgatttaggaggggaagggaggagaggatttatttttcctttttaaattacggactatat 6938358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 31348348 - 31348409
Alignment:
Q  148 aggggaagggaggga-gggtttacttttcgtttttaaattacggactatatgacatgttttt 208  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||  ||||| ||||||||    
T  31348348 aggggaagggagggaagggtttacttttcatttttaaattacggacactatgaaatgttttt 31348409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 192
Target Start/End: Original strand, 21694906 - 21694962
Alignment:
Q  137 gagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    |||||||||| ||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  21694906 gagggtttaggaggggaagggacgggagggcttacttttcttttttaaattacggac 21694962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 22186719 - 22186787
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattac 188  Q
    |||||||||||||||||||||||||| | |||||||||||| || ||| ||||||  ||||||||||||    
T  22186719 agggtgtatttggattgagggtttaggaagggaagggagggcagagttcacttttaatttttaaattac 22186787  T

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Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 17938355 - 17938264
Alignment:
Q  118 ctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgttttt 208  Q
    |||||||| | |||||||||||  ||||| ||||||||||||  ||| ||||||||||| ||||||||||||  ||||||| |||| |||||    
T  17938355 ctaagggtatgtttggattgagaatttaggaggggaagggagatgagagtttacttttcttttttaaattacaaactatataacatattttt 17938264  T

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Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 197
Target Start/End: Complemental strand, 21695134 - 21695055
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatat 197  Q
    ||||||||| ||||||||| |||||||  ||||||||| || ||||||||||||||||  |||||||||| |||| ||||    
T  21695134 taagggtgtgtttggattgggggtttatgaggggaaggaagcggagggtttacttttctattttaaattatggacaatat 21695055  T

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Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 27735987 - 27735917
Alignment:
Q  123 ggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggac 192  Q
    ||||| ||||||| |||||||||| |||||||||||||  |||||| | ||||| ||||||||||||||||    
T  27735987 ggtgtgtttggatggagggtttaggaggggaagggaggatagggttcatttttcatttttaaattacggac 27735917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 41174591 - 41174517
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    ||||||||| ||||||| |||||||||| ||||||||||| |||| |||||| ||||| ||||||| ||| ||||    
T  41174591 taagggtgtgtttggatggagggtttaggaggggaagggaggggatggtttagttttcatttttaatttagggac 41174517  T

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Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 6938493 - 6938420
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacgga 191  Q
    ||||||||| ||||||| || ||||||  ||||||| |||||| |||||| ||||||| |||||||||||||||    
T  6938493 taagggtgtgtttggatggaaggtttatgaggggaatggaggggagggttcacttttcatttttaaattacgga 6938420  T

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Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 222
Target Start/End: Original strand, 16400809 - 16400902
Alignment:
Q  130 ttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 222  Q
    ||||||||||||||||| ||| ||||||| |||||| || ||||||  |||||| | |||  ||||||  |||||||||||||||||| |||||    
T  16400809 ttggattgagggtttaggaggagaagggaggggaggattcacttttattttttatactacaaactatacaacatgtttttctaaaataaattaa 16400902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 17938114 - 17938179
Alignment:
Q  128 atttggattgagggtttagaaggggaagggagggagg-gtttacttttcgtttttaaattacggac 192  Q
    |||||||| |||||||||| ||||||| ||||||| | ||||| ||||||||||||||||| ||||    
T  17938114 atttggatggagggtttaggaggggaatggagggaagagtttaattttcgtttttaaattatggac 17938179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 47846298 - 47846233
Alignment:
Q  123 ggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaatta 187  Q
    ||||| |||||||||||||||||  ||| ||||||| ||||||||||||||||  |||||||||||    
T  47846298 ggtgtgtttggattgagggtttaagaggagaagggatgggagggtttacttttattttttaaatta 47846233  T

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Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 169
Target Start/End: Complemental strand, 49735736 - 49735687
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaaggga-gggagggttta 169  Q
    ||||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  49735736 agggtgtgtttggattgagggtttaggaggggaagggaggggagggttta 49735687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 5730830 - 5730902
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    ||||||| ||||||| |||||||||| |||| ||| || |||||||||||  |||| ||||||||||||||||    
T  5730830 agggtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattacggac 5730902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 37761708 - 37761636
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    ||||||| ||||||| |||| |||| |||||||||||| ||||||| || |||||| ||||||||||| ||||    
T  37761708 agggtgtgtttggatggaggatttaaaaggggaagggaggggagggcttccttttcttttttaaattatggac 37761636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 53260716 - 53260771
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttc 175  Q
    ||||||||| ||||||| |||||||||| |||||||||||||| ||||| |||||||    
T  53260716 taagggtgtgtttggatggagggtttaggaggggaagggaggg-gggttcacttttc 53260771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 189
Target Start/End: Complemental strand, 7977743 - 7977672
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacg 189  Q
    ||||||||| |||||||||||||||||  ||||||| ||| ||||||||| | ||||  |||||||||||||    
T  7977743 taagggtgtgtttggattgagggtttatgaggggaaaggaggggagggttcaattttattttttaaattacg 7977672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 11089755 - 11089687
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggact 193  Q
    ||||||||| |||||||||||| |||||||||||||      || ||||||| |||| |||||||||||||||||    
T  11089755 taagggtgtgtttggattgaggatttagaaggggaa------gatggtttacatttcttttttaaattacggact 11089687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 175
Target Start/End: Original strand, 35565566 - 35565613
Alignment:
Q  129 tttggattgagggtttagaaggggaaggga-gggagggtttacttttc 175  Q
    |||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  35565566 tttggattgagggtttagcaggggaagggaggggagggcttacttttc 35565613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 17182729 - 17182623
Alignment:
Q  121 agggtgtatttggattgagggttta-gaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 219  Q
    ||||||| ||||||||||||||||| || ||| |||| |||||||  ||||||||  ||||||||||||| || |  | | || ||||| ||||||| ||    
T  17182729 agggtgtgtttggattgagggtttatgaggggaaaggaagggaggacttacttttattttttaaattacgaacaaggtaaaatatttttttaaaataaat 17182630  T
Q  220 taagtgt 226  Q
    |||||||    
T  17182629 taagtgt 17182623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 191
Target Start/End: Original strand, 24565343 - 24565417
Alignment:
Q  118 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacgga 191  Q
    |||||||||| ||||||| || ||||||| | ||||||   ||| |||||||||||||| |||||||||||||||    
T  24565343 ctaagggtgtgtttggatggaaggtttaggaagggaagactggggagggtttacttttcatttttaaattacgga 24565417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 224
Target Start/End: Original strand, 28332850 - 28332908
Alignment:
Q  166 tttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagt 224  Q
    |||||||||| ||||||||||||  ||||||| ||| ||||||||||| || |||||||    
T  28332850 tttacttttcttttttaaattacatactatataacaggtttttctaaagtaaattaagt 28332908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 214
Target Start/End: Original strand, 36277781 - 36277819
Alignment:
Q  176 gtttttaaattacggactatatgacatgtttttctaaaa 214  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  36277781 gtttttaaattatggactatatggcatgtttttctaaaa 36277819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 34995108 - 34995157
Alignment:
Q  177 tttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    ||||||||||||| || || ||| |||||||||||||||| |||||||||    
T  34995108 tttttaaattacgaacaatgtgaaatgtttttctaaaataaattaagtgt 34995157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 2917151 - 2917111
Alignment:
Q  176 gtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    ||||||||||| |||||||||| ||||| ||||||||||||    
T  2917151 gtttttaaattccggactatataacatgattttctaaaata 2917111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 216
Target Start/End: Original strand, 22920981 - 22921077
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    ||||||| |||||||||| ||||||| |||| ||  ||| ||||  ||||| |||| ||||||||||||  |||| || ||||||||||||| ||||    
T  22920981 agggtgtgtttggattgatggtttaggagggaaaaagagaggagaatttacgtttcttttttaaattacaaactacataacatgtttttctagaata 22921077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 216
Target Start/End: Complemental strand, 22970818 - 22970722
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    ||||||| |||||||||| ||||||| |||| ||  ||| ||||  ||||| |||| ||||||||||||  |||| || ||||||||||||| ||||    
T  22970818 agggtgtgtttggattgatggtttaggagggaaaaagagaggagaatttacgtttcttttttaaattacaaactacataacatgtttttctagaata 22970722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 35248922 - 35248858
Alignment:
Q  129 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 192  Q
    ||||||| |||||||||| || || |||||||| ||||||||||||||  |||||||||| ||||    
T  35248922 tttggatggagggtttaggagaggtagggaggggagggtttacttttcaattttaaattatggac 35248858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 41174397 - 41174441
Alignment:
Q  172 tttcgtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    |||| ||||||||||| |||||||||  |||||||||||||||||    
T  41174397 tttcttttttaaattagggactatatagcatgtttttctaaaata 41174441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 44784038 - 44784098
Alignment:
Q  166 tttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    |||||||||| ||||||||||||  || |||| ||| ||||||||||| || |||||||||    
T  44784038 tttacttttcttttttaaattacataccatataacaggtttttctaaagtaaattaagtgt 44784098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 44784206 - 44784166
Alignment:
Q  150 gggaagggagggagg-gtttacttttcgtttttaaattacg 189  Q
    ||||||||||||| | |||||||||||||||||||||||||    
T  44784206 gggaagggagggaagagtttacttttcgtttttaaattacg 44784166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 36347785 - 36347679
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 219  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||    
T  36347785 agggtgtgtttggattgagggtttaggaggggaagggaagggagagtttacttttcttttttaaattacggactatataacatgtttttctaaaataaat 36347686  T
Q  220 taagtgt 226  Q
    |||||||    
T  36347685 taagtgt 36347679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 116 - 226
Target Start/End: Complemental strand, 15224943 - 15224832
Alignment:
Q  116 atctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaa 214  Q
    |||||||||||| |||||||  ||||||||| |||||||||||||| | |||||||||||| |||||||||||||| |||||| ||||||||||||| ||    
T  15224943 atctaagggtgtgtttggatcaagggtttaggaggggaagggaggggatggtttacttttcttttttaaattacgggctatataacatgtttttctagaa 15224844  T
Q  215 tatattaagtgt 226  Q
    || |||||||||    
T  15224843 taaattaagtgt 15224832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 35736175 - 35736281
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 219  Q
    ||||||| |||||||||||||||||| |||||||||||||| |||| ||| ||||| ||||||||| |||||||| || |||||||||||||||||| ||    
T  35736175 agggtgtgtttggattgagggtttaggaggggaagggaggggaggggttaattttcttttttaaatcacggactagataacatgtttttctaaaataaat 35736274  T
Q  220 taagtgt 226  Q
     ||||||    
T  35736275 gaagtgt 35736281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 8427107 - 8427010
Alignment:
Q  129 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtg 225  Q
    |||||||||||||||||| |||| ||||||||| || ||||||||||| |||||||| ||| ||| |||| |||||||||||||||||| ||||||||    
T  8427107 tttggattgagggtttaggagggaaagggaggggagagtttacttttcatttttaaagtacagacgatataacatgtttttctaaaataaattaagtg 8427010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 121 - 224
Target Start/End: Complemental strand, 39732972 - 39732869
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 219  Q
    ||||||| |||||||||| |||||   ||||||||| | |||| | |||||||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  39732972 agggtgtgtttggattgaaggtttgagaggggaaggaaagggatgatttacttttcgtttttaaattacggactatat-acatgtttttctaaaataaat 39732874  T
Q  220 taagt 224  Q
    |||||    
T  39732873 taagt 39732869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 115 - 226
Target Start/End: Original strand, 41778767 - 41778879
Alignment:
Q  115 aatctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaa 213  Q
    ||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||    ||||||||| ||||  ||| | |||||||| ||||    
T  41778767 aatctaagggtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttgtactttaaattatggacagtataaaatgtttttttaaa 41778866  T
Q  214 atatattaagtgt 226  Q
    ||| |||||||||    
T  41778867 ataaattaagtgt 41778879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 225
Target Start/End: Complemental strand, 36046443 - 36046341
Alignment:
Q  123 ggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 222  Q
    ||||| |||||||||||||||||  ||||||||||||||  |||||||||||  |||||||||||||||| |||| ||||| |||| ||||||| ||| |    
T  36046443 ggtgtgtttggattgagggtttatgaggggaagggaggggaggtttacttttgttttttaaattacggacgatataacatgcttttataaaataaattga 36046344  T
Q  223 gtg 225  Q
    |||    
T  36046343 gtg 36046341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 119 - 226
Target Start/End: Complemental strand, 19567062 - 19566959
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatata 218  Q
    |||| |||| |||||||||||||||||| || ||| |||||||    |||| |||   ||||||||||||||||||||| |||||||||||||||||| |    
T  19567062 taagagtgtgtttggattgagggtttaggagaggaggggaggg----tttaatttcattttttaaattacggactatataacatgtttttctaaaataaa 19566967  T
Q  219 ttaagtgt 226  Q
    ||||||||    
T  19566966 ttaagtgt 19566959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 9592032 - 9591973
Alignment:
Q  167 ttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    ||||||||  ||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  9592032 ttactttttttttttaaattacgcactatataacatgtttttctaaaatatattaagtgt 9591973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 9426976 - 9427074
Alignment:
Q  112 taaaatctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttc 209  Q
    |||| ||||| ||||| ||||||||||  |||||| ||||||||||||| ||||||||  ||||| ||||||||||||  ||||||| |||||||||||    
T  9426976 taaactctaatggtgtgtttggattgaaagtttaggaggggaagggaggagagggtttgattttcttttttaaattaccaactatataacatgtttttc 9427074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 9631806 - 9631732
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggac 192  Q
    ||||||||| ||||||| |||||||||| |||| |||||||  ||||||| ||||||||||||||||||||||||    
T  9631806 taagggtgtgtttggatggagggtttaggagggaaagggagaagagggttaacttttcgtttttaaattacggac 9631732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 23748341 - 23748267
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    ||||||||| ||||||| |||||||||| ||||||||||| ||||||||| ||||||| |||||||| |||||||    
T  23748341 taagggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcatttttaaactacggac 23748267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 39821708 - 39821774
Alignment:
Q  159 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtg 225  Q
    ||||||||||||||||| ||||||||||| ||| | ||| |||||||||||||||||| ||||||||    
T  39821708 gggagggtttacttttcatttttaaattatggattctataacatgtttttctaaaataaattaagtg 39821774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 123 - 223
Target Start/End: Original strand, 41841684 - 41841785
Alignment:
Q  123 ggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 221  Q
    ||||| |||||||||||| ||||| |||| |||||| ||||||||||  ||||| ||||||||||||  ||||||| |||| |||| |||||||| ||||    
T  41841684 ggtgtgtttggattgaggatttaggagggaaagggatgggagggtttgattttcttttttaaattaccaactatataacatattttcctaaaataaatta 41841783  T
Q  222 ag 223  Q
    ||    
T  41841784 ag 41841785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 2241413 - 2241516
Alignment:
Q  123 ggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 221  Q
    ||||| ||| ||||||||||| || |||||||||||||| || ||||||||||   || ||||||||||||||||| | | |||||||||||||| ||||    
T  2241413 ggtgtgtttagattgagggtt-aggaggggaagggaggggagagtttacttttttattataaattacggactatataatacgtttttctaaaataaatta 2241511  T
Q  222 agtgt 226  Q
    |||||    
T  2241512 agtgt 2241516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 22356248 - 22356176
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    ||||||| |||||||||||| ||||| ||||||||||| ||||||||| | ||||| ||||||||||||||||    
T  22356248 agggtgtgtttggattgaggatttaggaggggaagggaggggagggttcatttttcttttttaaattacggac 22356176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 35736435 - 35736359
Alignment:
Q  117 tctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    ||||||||||| ||||||| |||||||||| ||| ||||||| ||||||| | |||||||||||||||||| |||||    
T  35736435 tctaagggtgtgtttggatggagggtttaggaggtgaagggaggggagggctcacttttcgtttttaaatttcggac 35736359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 118 - 225
Target Start/End: Original strand, 12541767 - 12541871
Alignment:
Q  118 ctaagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacat-gtttttctaaaata 216  Q
    ||||| |||| |||||||||||||||||| |||||| ||||| |    | |||||||| ||||||||||||||||||||| | ||  |||||||||||||    
T  12541767 ctaagagtgtgtttggattgagggtttaggaggggaggggagag----tctacttttcttttttaaattacggactatataaaatattttttctaaaata 12541862  T
Q  217 tattaagtg 225  Q
     ||||||||    
T  12541863 aattaagtg 12541871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 23748134 - 23748201
Alignment:
Q  159 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    ||||||||||| ||||| |||||||| |||||||||||| ||||||||||| |||||| || ||||||    
T  23748134 gggagggtttagttttcttttttaaactacggactatataacatgtttttcaaaaataaatcaagtgt 23748201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 208
Target Start/End: Original strand, 8426881 - 8426967
Alignment:
Q  123 ggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 208  Q
    |||||||||| || ||| |||||| ||||||||||| ||||||||||||||||  ||||||||||| ||||  ||||| ||||||||    
T  8426881 ggtgtatttgaatggagagtttaggaggggaagggaagggagggtttacttttaatttttaaattaaggacactatgaaatgttttt 8426967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 17380087 - 17380013
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    ||||||||| |||||||||||||||||| |||||||| || |||| |||||  ||||| ||||||||||||||||    
T  17380087 taagggtgtgtttggattgagggtttaggaggggaagtgaggggatggtttgattttcatttttaaattacggac 17380013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 42296547 - 42296441
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 219  Q
    ||||||| ||||||||||||| |||| ||||||||||||| ||||||| ||||||  ||||||||||||| || || | | || ||||| ||||||  ||    
T  42296547 agggtgtgtttggattgagggattaggaggggaagggaggagagggttcacttttattttttaaattacgaacgatgtaaaatatttttttaaaatgaat 42296448  T
Q  220 taagtgt 226  Q
    |||||||    
T  42296447 taagtgt 42296441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 214
Target Start/End: Original strand, 31795766 - 31795863
Alignment:
Q  118 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaa 214  Q
    ||||| |||| ||||||| |||||||||  ||| |||||||||| |||  ||||||||||||||||||||||||||  ||||| | |||||| |||||    
T  31795766 ctaagagtgtgtttggatggagggtttatgaggtgaagggaggggaggacttacttttcgtttttaaattacggacactatgaaaagtttttttaaaa 31795863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 226
Target Start/End: Complemental strand, 2381233 - 2381125
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 217  Q
    ||||||||||||||||||| |||||||  |||| | ||||||| || ||| ||||||  ||||||||||||| || || | | |||||||| |||||||     
T  2381233 taagggtgtatttggattgtgggtttatgagggaatgggaggggagagttcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaataa 2381134  T
Q  218 attaagtgt 226  Q
    |||||||||    
T  2381133 attaagtgt 2381125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 28262642 - 28262586
Alignment:
Q  165 gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 221  Q
    ||||||||||| |||||||||||  |||||||| |||||||||||||||||| ||||    
T  28262642 gtttacttttcttttttaaattattgactatataacatgtttttctaaaataaatta 28262586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 226
Target Start/End: Original strand, 31061357 - 31061465
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 217  Q
    ||||||||| |||||||||| ||||||| ||||||| ||| ||||||| | ||||||  ||||||||||||| || || | | |||| ||| |||||||     
T  31061357 taagggtgtgtttggattgaaggtttaggaggggaaaggatgggagggctcacttttattttttaaattacgaacaatgtaaaatgtgtttttaaaataa 31061456  T
Q  218 attaagtgt 226  Q
    |||||||||    
T  31061457 attaagtgt 31061465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 31796000 - 31795907
Alignment:
Q  129 tttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    |||||||||| ||||||| |||||||||||||||    ||| ||||| ||| ||||| ||||| || || |||||||||| ||||||| |||||||||    
T  31796000 tttggattgaaggtttaggaggggaagggaggga----ttaattttcttttctaaatcacggagtaaataacatgtttttttaaaataaattaagtgt 31795907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 222
Target Start/End: Complemental strand, 36567093 - 36566993
Alignment:
Q  124 gtgtatttggattgagggtttagaaggggaagggagg-gagggtttactttt-cgtttttaaattacggactatatgacatgtttttctaaaatatatta 221  Q
    |||| |||||||||||||||||| |||||||  |||| || | ||||||||| ||||||||||||| | | ||||| ||||||||||||| |||| ||||    
T  36567093 gtgtgtttggattgagggtttaggaggggaatagaggagatgatttactttttcgtttttaaattatgaattatataacatgtttttctataataaatta 36566994  T
Q  222 a 222  Q
    |    
T  36566993 a 36566993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 17379839 - 17379886
Alignment:
Q  114 aaatctaagggtgtatttggattgagggtttagaaggggaagggaggg 161  Q
    |||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  17379839 aaatcttagggtgtgtttggattgagggtttaggaggggaagggaggg 17379886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 191
Target Start/End: Complemental strand, 45257551 - 45257480
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacgga 191  Q
    ||||||| ||||||| |||| ||||| | ||||||||||| || |||||||||||| |||||||||||||||    
T  45257551 agggtgtgtttggatggaggttttaggatgggaagggaggagatggtttacttttcttttttaaattacgga 45257480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 216
Target Start/End: Complemental strand, 3094607 - 3094501
Alignment:
Q  111 ataaaatctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttc 209  Q
    ||||||||||| ||||| |||||||||||||||||| | || ||||||||| | |  | ||||||  ||||||||||||  ||||| | | |||||||||    
T  3094607 ataaaatctaacggtgtgtttggattgagggtttaggaaggaaagggaggggaagactcacttttattttttaaattacaaactatgtaaaatgtttttc 3094508  T
Q  210 taaaata 216  Q
    |||||||    
T  3094507 taaaata 3094501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 214
Target Start/End: Complemental strand, 40022608 - 40022523
Alignment:
Q  130 ttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaa 214  Q
    |||||| |||||||||  ||| |||||||||| ||||||||| |||| |||||||||||| |||  ||||| |||||||| |||||    
T  40022608 ttggatggagggtttaagaggagaagggaggggagggtttacatttcatttttaaattacagacactatgaaatgtttttttaaaa 40022523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 40022363 - 40022476
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggagggaggg--------tttacttttcgtttttaaattacggactatatgacatgtttttctaa 212  Q
    ||||||| |||||||||||||||||| |||| ||||| |||||||        |||  ||||  ||||||||||| | ||||||| |||||||||| |||    
T  40022363 agggtgtgtttggattgagggtttaggagggtaagggggggagggtttgttttttttttttttttttttaaattatgaactatataacatgtttttgtaa 40022462  T
Q  213 aatatattaagtgt 226  Q
    |||| |||||||||    
T  40022463 aataaattaagtgt 40022476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 886927 - 886986
Alignment:
Q  130 ttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattac 188  Q
    |||| |||||||||||| ||||||||| | ||||||| ||||||||| ||||||||||||    
T  886927 ttgggttgagggtttaggaggggaaggtaagggagggcttacttttcttttttaaattac 886986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 160
Target Start/End: Original strand, 33265611 - 33265646
Alignment:
Q  125 tgtatttggattgagggtttagaaggggaagggagg 160  Q
    |||||||||||||||||||||| |||||||||||||    
T  33265611 tgtatttggattgagggtttaggaggggaagggagg 33265646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 36046205 - 36046276
Alignment:
Q  122 gggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 192  Q
    |||||| ||||||| |||||||||| |||||||  ||||| || ||||| ||||| ||||||||||||||||    
T  36046205 gggtgtgtttggatggagggtttaggaggggaaatgaggggagagtttatttttcatttttaaattacggac 36046276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 226
Target Start/End: Original strand, 45257294 - 45257413
Alignment:
Q  108 aaaataaaatctaagggtgtatttggattgagggtttagaagggg-aagggagggagggtttacttttcgtttttaaattacggactatatgacatgttt 206  Q
    |||||||||  ||||||||| ||||||||||| |||||| ||||| |||| |||||||  | ||||||  ||| ||||||||| || || | | ||||||    
T  45257294 aaaataaaaattaagggtgtgtttggattgagagtttaggaggggaaaggaagggaggactcacttttattttataaattacgaacaatgtaaaatgttt 45257393  T
Q  207 ttctaaaatatattaagtgt 226  Q
    |  ||||||| |||||||||    
T  45257394 tcttaaaataaattaagtgt 45257413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 36347539 - 36347629
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaaggg-agggagggtttacttttcgtttttaaattacggactatatgacatgttttt 208  Q
    ||||||||| |||||||  ||||||||| |||||||||| || ||| ||| ||||||| |||||| ||||||||   |||||||| |||||    
T  36347539 taagggtgtgtttggatgaagggtttaggaggggaagggaagagagagttcacttttcatttttatattacggatactatgacatattttt 36347629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 1583282 - 1583233
Alignment:
Q  159 gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 208  Q
    ||||||||| ||||||| ||||||||||||||||  ||||| ||||||||    
T  1583282 gggagggttcacttttcatttttaaattacggacactatgaaatgttttt 1583233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 15224733 - 15224782
Alignment:
Q  159 gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 208  Q
    ||||| ||||||||||| ||||||||||||||||  ||||| ||||||||    
T  15224733 gggagtgtttacttttcatttttaaattacggacactatgaaatgttttt 15224782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 31061596 - 31061543
Alignment:
Q  129 tttggattgagggtttagaaggggaaggga-gggagggtttacttttcgttttt 181  Q
    |||||||||||||||||| ||||||| ||| |||||| |||||||||| |||||    
T  31061596 tttggattgagggtttaggaggggaatggaggggaggatttacttttctttttt 31061543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 887335 - 887283
Alignment:
Q  140 ggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacgga 191  Q
    ||||||| |||||||||||||| || | ||||||||| |||||||||||||||    
T  887335 ggtttaggaggggaagggaggggagcgcttacttttcttttttaaattacgga 887283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 7681488 - 7681417
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacgga 191  Q
    ||||||| | ||||||| |||||||||   ||||||||| ||||||||||||||||  |||||||||| ||||    
T  7681488 taagggtttgtttggatcgagggtttaagcggggaaggg-gggagggtttactttttatttttaaattgcgga 7681417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 16565832 - 16565883
Alignment:
Q  177 tttttaaattacggactatatg--acatgtttttctaaaatatattaagtgt 226  Q
    ||||||||||||| |||||||   |||||||||||||||||| |||||||||    
T  16565832 tttttaaattacgaactatatataacatgtttttctaaaataaattaagtgt 16565883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 31928285 - 31928225
Alignment:
Q  129 tttggattgagggtttagaaggggaaggg-agggagggtttacttttcgtttttaaattac 188  Q
    ||||||| |||||||||| |||||||||| |||||||| | ||||||  ||||||||||||    
T  31928285 tttggatcgagggtttaggaggggaagggaagggagggctcacttttaatttttaaattac 31928225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 226
Target Start/End: Original strand, 34187573 - 34187681
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 217  Q
    ||||||||| ||||||||||| |||||| || |||||| | |||| |||| ||||||  ||||||||||||| || |  | | |||||||  |||||||     
T  34187573 taagggtgtgtttggattgagagtttaggagtggaaggaaggggaaggttcacttttaatttttaaattacgaacaacgtaagatgttttattaaaataa 34187672  T
Q  218 attaagtgt 226  Q
    |||||||||    
T  34187673 attaagtgt 34187681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 39732768 - 39732816
Alignment:
Q  159 gggagggtttacttttcgtttttaaattacggactatatgacatgtttt 207  Q
    ||||||||||||||||| ||||||||||||| ||  ||||| |||||||    
T  39732768 gggagggtttacttttcatttttaaattacgaacattatgaaatgtttt 39732816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 30010332 - 30010438
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 219  Q
    ||||||| |||||||||||||||||| |||||||||||||| ||| |||||||||| | ||||||||||||||||||| |||||||||||||||||| ||    
T  30010332 agggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttgtttaaattacggactatataacatgtttttctaaaataaat 30010431  T
Q  220 taagtgt 226  Q
    |||||||    
T  30010432 taagtgt 30010438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 119 - 226
Target Start/End: Original strand, 12234008 - 12234116
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 217  Q
    ||||||||| |||||||||||||||||| |||||||||||||| |||| ||| ||||| ||||||||||||||||||||| ||||||||||||||||||     
T  12234008 taagggtgtgtttggattgagggtttaggaggggaagggagggtagggcttaattttcttttttaaattacggactatataacatgtttttctaaaataa 12234107  T
Q  218 attaagtgt 226  Q
    || ||||||    
T  12234108 atcaagtgt 12234116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 40095182 - 40095071
Alignment:
Q  117 tctaagggtgtatttggattgagggtttagaaggggaagggaggga-gggtttacttttcgtttttaaattacggactatatgacatg-tttttctaaaa 214  Q
    ||||||||||| ||||||||||||||||||||||  |||||| ||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||    
T  40095182 tctaagggtgtgtttggattgagggtttagaaggaaaagggaaggaagggtttacttttcgtttttaaattacagactatataacatgttttttctaaaa 40095083  T
Q  215 tatattaagtgt 226  Q
    || |||||||||    
T  40095082 taaattaagtgt 40095071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 32951562 - 32951456
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 219  Q
    ||||||| ||||||||||| |||||| || ||||||||||| || ||||||||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  32951562 agggtgtgtttggattgagagtttaggagaggaagggaggggagagtttacttttcgtttttaaattacggactatagaacatgtttttctaaaataaat 32951463  T
Q  220 taagtgt 226  Q
    |||||||    
T  32951462 taagtgt 32951456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 222
Target Start/End: Original strand, 10391870 - 10391974
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 217  Q
    |||||||| ||||||||||||| ||||| |||||||  ||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||     
T  10391870 taagggtgaatttggattgaggttttaggaggggaaacgaggggagggtttacttttcatttttaaattacggactatattacatgtttttctaaaataa 10391969  T
Q  218 attaa 222  Q
    |||||    
T  10391970 attaa 10391974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 121 - 216
Target Start/End: Complemental strand, 35349706 - 35349610
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    ||||||| |||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  35349706 agggtgtgtttggattaagggtttatgaggggaagggaggggagggtttacttttcgtttttaaattacggactatataacatttttttctaaaata 35349610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 2859168 - 2859070
Alignment:
Q  129 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||  ||||||||||||||||||||| ||||||||||| |||||| |||||||||    
T  2859168 tttggattgaaggtttaggaggggaagggaggggagggtttacttttattttttaaattacggactatataacatgtttttcaaaaataaattaagtgt 2859070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 118 - 226
Target Start/End: Complemental strand, 38510141 - 38510032
Alignment:
Q  118 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    ||||| |||| |||||||| ||||||||| |||||||||||||| |||||||| ||||| |||||||| |||||||||||| ||||||||||||||||||    
T  38510141 ctaagagtgtgtttggattaagggtttaggaggggaagggaggggagggtttagttttcttttttaaactacggactatataacatgtttttctaaaata 38510042  T
Q  217 tattaagtgt 226  Q
     || ||||||    
T  38510041 aatcaagtgt 38510032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 41498402 - 41498495
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttcta 211  Q
    ||||||||| |||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| | ||||| | ||||| |||||||    
T  41498402 taagggtgtgtttggattgagggtttaggaggggaagtgaggggagggtttacttttcgtttttaaattatgaactatttaacatgattttcta 41498495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 30010579 - 30010504
Alignment:
Q  118 ctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    |||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||    
T  30010579 ctaagggtgtgtttggatggagggtttagaaggggaagggaggggagggtttacttttcattttgaaattacggac 30010504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 7444489 - 7444571
Alignment:
Q  132 ggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaa 213  Q
    ||||||||||||| | ||| ||||||| ||||||||||||||||| |||||||||||||||| |||||||||| |||||||||    
T  7444489 ggattgagggtttgggaggagaagggaagggagggtttacttttcttttttaaattacggaccatatgacatgattttctaaa 7444571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 51597676 - 51597774
Alignment:
Q  129 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    |||||||||||||||||  |  ||||||||||| || ||||||||||| ||||||||| ||||||||||| |||||||||| ||||||| |||||||||    
T  51597676 tttggattgagggtttatgaaaggaagggaggggagagtttacttttcttttttaaatcacggactatataacatgtttttttaaaataaattaagtgt 51597774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 121 - 207
Target Start/End: Original strand, 40094933 - 40095020
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttt 207  Q
    ||||||| ||||||| |||||||||| ||||||||| |||| |||||||||||||| ||||||||||||||||  ||||| |||||||    
T  40094933 agggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttacttttcatttttaaattacggacactatgaaatgtttt 40095020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 213
Target Start/End: Original strand, 26324013 - 26324112
Alignment:
Q  120 aagggtgtatttggattgagggtttagaaggggaaggga------gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaa 213  Q
    |||||||| |||||||||||||||||| |||||||||||      ||||||||||  ||||| ||||||||||||  ||||||| |||||||||||||||    
T  26324013 aagggtgtgtttggattgagggtttaggaggggaagggaggggaggggagggtttgattttcttttttaaattaccaactatataacatgtttttctaaa 26324112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 38509894 - 38509966
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggac 192  Q
    ||||||| ||||||| |||||||||| |||||||||||| |||||||| ||||||| ||||||||||||||||    
T  38509894 agggtgtgtttggatagagggtttaggaggggaagggagaggagggttcacttttcatttttaaattacggac 38509966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 12234252 - 12234182
Alignment:
Q  123 ggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    ||||| ||||||| |||||||||| ||||||||||| ||||||||||| ||||| ||||||||||||||||    
T  12234252 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagttttcatttttaaattacggac 12234182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 25268502 - 25268437
Alignment:
Q  127 tatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacgga 191  Q
    ||||||||| ||||||||||||||||||| || ||||||||||||||| | |||||||||||||||    
T  25268502 tatttggatggagggtttagaaggggaagtgaggggagggtttactttccttttttaaattacgga 25268437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 35349464 - 35349536
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggac 192  Q
    ||||||||| ||||||| |||||||||  |||||| ||| ||||||||||||||||| ||||||||||||||||    
T  35349464 taagggtgtgtttggatggagggtttaagaggggagggg-gggagggtttacttttcatttttaaattacggac 35349536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 188
Target Start/End: Complemental strand, 35928056 - 35927988
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaa-gggagggagggtttacttttcgtttttaaattac 188  Q
    ||||||| ||||||||||||| |||||||||||| |||||||| | |||||||||| ||||||||||||    
T  35928056 agggtgtgtttggattgagggcttagaaggggaaggggagggatgatttacttttcttttttaaattac 35927988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 8529838 - 8529905
Alignment:
Q  159 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    ||||||||||||||||| ||||||||||||  ||||||| |||||||||| | ||||| |||||||||    
T  8529838 gggagggtttacttttcttttttaaattacaaactatataacatgttttttttaaataaattaagtgt 8529905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 50744486 - 50744419
Alignment:
Q  159 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    ||||||||||  ||||| ||||||||||||||||||||| ||| |||| ||||||||| |||||||||    
T  50744486 gggagggtttgtttttcttttttaaattacggactatataacaggtttctctaaaataaattaagtgt 50744419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 2858932 - 2859017
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtt 205  Q
    ||||||| ||||||| |||||||||| |||| ||||||||| |||||||||||||| ||| |||||||| |||  ||||| |||||    
T  2858932 agggtgtgtttggatggagggtttaggagggaaagggaggggagggtttacttttcatttctaaattacagaccctatgaaatgtt 2859017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 226
Target Start/End: Complemental strand, 45585884 - 45585823
Alignment:
Q  165 gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    ||||||||||| | || |||||||||||||||| |||||||||| ||||||| |||||||||    
T  45585884 gtttacttttcctcttaaaattacggactatataacatgtttttttaaaataaattaagtgt 45585823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 207
Target Start/End: Complemental strand, 41498649 - 41498561
Alignment:
Q  121 agggtgtatttggattgagggtttagaagggg-aagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttt 207  Q
    ||||||| ||||||| ||| |||||| ||||| ||||||||| ||| |||||||||| ||||||||||||||||  ||||| |||||||    
T  41498649 agggtgtgtttggatggagagtttaggaggggtaagggaggggaggatttacttttcatttttaaattacggacactatgaaatgtttt 41498561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 47261519 - 47261443
Alignment:
Q  117 tctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 192  Q
    ||||||||||| ||||||| | || |||||||||||||| ||||| |||||||| ||||| |||||||| |||||||    
T  47261519 tctaagggtgtgtttggatgggggatttagaaggggaagagagggtagggtttaattttcttttttaaagtacggac 47261443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 222
Target Start/End: Complemental strand, 49946834 - 49946730
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 217  Q
    ||||| ||| ||||||||||||| ||||  |||||||||| | ||||||||||||||| | ||||||  |  |||||||| |||||||||| |||||||     
T  49946834 taaggatgtgtttggattgagggattaggcggggaagggatgtgagggtttacttttcttgtttaaaccagagactatataacatgtttttttaaaataa 49946735  T
Q  218 attaa 222  Q
    |||||    
T  49946734 attaa 49946730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 1085734 - 1085628
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 219  Q
    ||||||| ||||||| |||||||||| ||||||||||||| || |  | ||||||  ||||||||||||| || || | | |||||||| ||||||| ||    
T  1085734 agggtgtgtttggatagagggtttaggaggggaagggaggagatgactcacttttattttttaaattacgaaccatgtaaaatgtttttttaaaataaat 1085635  T
Q  220 taagtgt 226  Q
    |||||||    
T  1085634 taagtgt 1085628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 216
Target Start/End: Complemental strand, 2470940 - 2470883
Alignment:
Q  159 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    |||| |||||||||||| |||||||||||   ||||||| ||||||||||||||||||    
T  2470940 gggaaggtttacttttcttttttaaattatcaactatataacatgtttttctaaaata 2470883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 20576136 - 20576205
Alignment:
Q  124 gtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    |||| ||||||| |||||||||| ||||||||||| ||||| |||||  |||| ||||||||||||||||    
T  20576136 gtgtgtttggatagagggtttaggaggggaagggaggggagagtttagatttcatttttaaattacggac 20576205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 20607463 - 20607410
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttact 171  Q
    ||||||||| ||||||| |||||||||| ||||||||||| |||||||||||||    
T  20607463 taagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttact 20607410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 35513033 - 35512969
Alignment:
Q  129 tttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    ||||||| |||||||||| ||||||||||| ||||||| ||||||||  ||||||||||| ||||    
T  35513033 tttggatggagggtttaggaggggaagggaggggagggcttacttttattttttaaattatggac 35512969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 8530046 - 8529971
Alignment:
Q  118 ctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggac 192  Q
    |||||| ||| |||||||  || |||||| ||||||||||||| ||  ||||||||||| ||||||||||||||||    
T  8530046 ctaaggatgtgtttggatgaagagtttaggaggggaagggaggtgaaagtttacttttcatttttaaattacggac 8529971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 51303381 - 51303424
Alignment:
Q  118 ctaagggtgtatttggattgagggtttagaaggggaagggaggg 161  Q
    |||||||||| |||||||||||||||||| |||||| |||||||    
T  51303381 ctaagggtgtgtttggattgagggtttaggaggggaggggaggg 51303424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 6563618 - 6563683
Alignment:
Q  160 ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    |||||||||| ||||| ||||||||| || |||||||| |||||| ||||||||||| |||| ||||    
T  6563618 ggagggttta-ttttcttttttaaatgacagactatataacatgtctttctaaaataaattatgtgt 6563683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 1085485 - 1085562
Alignment:
Q  117 tctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttactttt-cgtttttaaattacggac 192  Q
    ||||||||||| ||||||| |||||||||| ||||| | ||| ||||||  |||||||| | ||||||||||||||||    
T  1085485 tctaagggtgtgtttggatggagggtttaggagggggatggaggggaggacttacttttccttttttaaattacggac 1085562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 7444744 - 7444667
Alignment:
Q  116 atctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 192  Q
    ||||||| |||| |||||||  || |||||||| |||||| ||||| |||||||| ||||| |||| |||||||||||    
T  7444744 atctaagagtgtgtttggatgaagagtttagaaagggaagagaggggagggtttagttttcattttaaaattacggac 7444667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 40709292 - 40709361
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacg 189  Q
    ||||||| |||||||| | ||||||  |||||||||||| |||||  ||||||||| |||||||||||||    
T  40709292 agggtgtgtttggatttaaggtttaagaggggaagggagaggaggacttacttttcttttttaaattacg 40709361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 192
Target Start/End: Complemental strand, 41676486 - 41676453
Alignment:
Q  159 gggagggtttacttttcgtttttaaattacggac 192  Q
    ||||||||||||||||| ||||||||||||||||    
T  41676486 gggagggtttacttttcatttttaaattacggac 41676453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 192
Target Start/End: Original strand, 44210946 - 44210979
Alignment:
Q  159 gggagggtttacttttcgtttttaaattacggac 192  Q
    ||||||||||||||||||||||||||||| ||||    
T  44210946 gggagggtttacttttcgtttttaaattatggac 44210979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 188
Target Start/End: Complemental strand, 525344 - 525276
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaaggg-agggagggtttacttttcgtttttaaattac 188  Q
    ||||||| |||||||||||||||||| | |||||||| ||| || ||| ||||||  ||||||||||||    
T  525344 agggtgtgtttggattgagggtttaggacgggaagggaaggaagagttcacttttaatttttaaattac 525276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 161
Target Start/End: Original strand, 20607223 - 20607263
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg 161  Q
    ||||||| |||| ||||||||||||| ||||||||||||||    
T  20607223 agggtgtgtttgaattgagggtttaggaggggaagggaggg 20607263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 44211103 - 44211043
Alignment:
Q  166 tttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    ||||| |||| ||| |||||||| | |||||| || ||||||||||||||| |||||||||    
T  44211103 tttacatttcttttataaattacagtctatataacgtgtttttctaaaataaattaagtgt 44211043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 49832547 - 49832615
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattac 188  Q
    |||||| ||||||||| | ||||||| |||||||| ||| |||| | ||||||||| ||||||||||||    
T  49832547 agggtgcatttggattcaaggtttaggaggggaagtgagaggagagcttacttttcttttttaaattac 49832615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 6e-30; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 31543316 - 31543210
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 219  Q
    ||||||| ||| |||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||| |||||||||||||||||| ||    
T  31543316 agggtgtgtttcgattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattatggaccatataacatgtttttctaaaataaat 31543217  T
Q  220 taagtgt 226  Q
    |||||||    
T  31543216 taagtgt 31543210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 129 - 225
Target Start/End: Original strand, 7979148 - 7979245
Alignment:
Q  129 tttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtg 225  Q
    ||||||||||||||||||||| ||||||||| |||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||| || |||||    
T  7979148 tttggattgagggtttagaagaggaagggagaggagagtttacttttcttttttaaattacggactatataacatgtttttctaaaataaatcaagtg 7979245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 11033419 - 11033523
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatt 220  Q
    ||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||| |||||||||||  ||||||||||||||||| |||    
T  11033419 agggtgtgtttggattgagggtttagaagaggaagggaggg-gggtttacttttcttttttaaataacggactatatatcatgtttttctaaaataaatt 11033517  T
Q  221 aagtgt 226  Q
    | ||||    
T  11033518 atgtgt 11033523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 7503198 - 7503092
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 219  Q
    ||||||| |||||||||||| ||| | |||||| ||||||| |||||||||||||||||||||||||| ||| ||||| |||||||||||||||||| ||    
T  7503198 agggtgtgtttggattgaggctttgggaggggaggggaggggagggtttacttttcgtttttaaattatggattatataacatgtttttctaaaataaat 7503099  T
Q  220 taagtgt 226  Q
    |||||||    
T  7503098 taagtgt 7503092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 1027094 - 1026989
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggaggga-gggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 217  Q
    ||||||||| |||||||| ||||||||| | ||||||||||||| ||||| ||||||| ||||||||||||||||||||| | ||||||||||||||||     
T  1027094 taagggtgtgtttggattaagggtttaggaagggaagggagggaagggttcacttttcttttttaaattacggactatat-aaatgtttttctaaaataa 1026996  T
Q  218 attaagt 224  Q
    |||||||    
T  1026995 attaagt 1026989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 1281151 - 1281249
Alignment:
Q  129 tttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    |||||||||||||||||| ||||||||||| | ||||||||||||||| |||||||||||||||| |||| |||||||||||||| ||| || ||||||    
T  1281151 tttggattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaattacggacgatataacatgtttttctaagataaatcaagtgt 1281249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 42650542 - 42650474
Alignment:
Q  158 agggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||    
T  42650542 agggagagtttacttttcgtttttaaattacggaatatataacatgtttttctaaaataaattaagtgt 42650474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 11575642 - 11575544
Alignment:
Q  129 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    |||||||| ||||||||| | | |||||||||| |||||||||||||| ||||||||||||  | ||||| |||||||||||||||||| |||||||||    
T  11575642 tttggattcagggtttaggatgagaagggaggggagggtttacttttcatttttaaattacaaattatataacatgtttttctaaaataaattaagtgt 11575544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 12022391 - 12022281
Alignment:
Q  117 tctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaat 215  Q
    ||||||||||| |||||||||||||||||| ||||||| ||| ||||||| | ||||||  |||||||||||||||| || | | |||||||| ||||||    
T  12022391 tctaagggtgtgtttggattgagggtttaggaggggaaaggaggggagggctcacttttattttttaaattacggacaatgtaaaatgtttttttaaaat 12022292  T
Q  216 atattaagtgt 226  Q
    | |||||||||    
T  12022291 aaattaagtgt 12022281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 121 - 221
Target Start/End: Original strand, 13404976 - 13405077
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 219  Q
    |||||||  ||||||||||||||||| ||||||||||| |||||   ||||||||| ||||||||| || |||||||| |||||||||||||||||| ||    
T  13404976 agggtgtggttggattgagggtttaggaggggaagggatgggagaaattacttttcttttttaaataacagactatataacatgtttttctaaaataaat 13405075  T
Q  220 ta 221  Q
    ||    
T  13405076 ta 13405077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 30479959 - 30479855
Alignment:
Q  123 ggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 221  Q
    ||||| |||||||||||||||||  || |||| |||| |||||||||| ||||| |||||||| ||| ||||||||| ||||||||||||||||| || |    
T  30479959 ggtgtgtttggattgagggtttatgagaggaatggagcggagggtttagttttcttttttaaactacagactatatgtcatgtttttctaaaataaatca 30479860  T
Q  222 agtgt 226  Q
    |||||    
T  30479859 agtgt 30479855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 43732931 - 43732859
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 192  Q
    ||||||| ||||||| |||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||    
T  43732931 agggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacggac 43732859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 118 - 226
Target Start/End: Original strand, 6315063 - 6315168
Alignment:
Q  118 ctaagggtgtatttggattgagggtttagaaggggaagggagggagg-gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    |||||||||| |||||||||||||||||| ||| ||| |||||||||  ||||| ||   ||||| ||||||||||||||| ||||||||||||||||||    
T  6315063 ctaagggtgtgtttggattgagggtttaggaggcgaa-ggagggaggaatttacatt---ttttttaattacggactatataacatgtttttctaaaata 6315158  T
Q  217 tattaagtgt 226  Q
     |||||||||    
T  6315159 aattaagtgt 6315168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 121 - 215
Target Start/End: Complemental strand, 9718723 - 9718628
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaat 215  Q
    ||||||| |||||||||||||||||| ||| |||||||||| |  ||||||||||| ||||||||||| | ||||||| |||| ||||||||||||    
T  9718723 agggtgtgtttggattgagggtttaggaggagaagggaggggaaagtttacttttcttttttaaattatgaactatataacatatttttctaaaat 9718628  T

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Target: chr8; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 16652988 - 16653055
Alignment:
Q  159 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||| || ||||||    
T  16652988 gggagggtttacttttcttttttaaattacggactatataacatgtttttataaaataaatcaagtgt 16653055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 2248452 - 2248558
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 219  Q
    ||||||| ||||||||||| |||||| |||||||||||||| || ||| | ||| | ||||||||||||||  ||||| |||||||||||||||||| ||    
T  2248452 agggtgtgtttggattgagagtttaggaggggaagggaggggagagttcaatttccttttttaaattacggtttatataacatgtttttctaaaataaat 2248551  T
Q  220 taagtgt 226  Q
     ||||||    
T  2248552 caagtgt 2248558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 3727086 - 3726996
Alignment:
Q  134 attgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaag 223  Q
    ||||||| ||||| |||| |||||||| ||| ||||||||||| |||||| ||||| |||||||| |||||||||||||||||| ||||||    
T  3727086 attgaggatttaggagggaaagggaggtgagagtttacttttcttttttagattacagactatataacatgtttttctaaaataaattaag 3726996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 117 - 226
Target Start/End: Original strand, 10028106 - 10028216
Alignment:
Q  117 tctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaat 215  Q
    ||||||| ||| ||||||| |||||||||| ||||||  ||||| |||  |||||||||| |||||||||||||||| |||| |||| ||||| ||||||    
T  10028106 tctaaggatgtgtttggatcgagggtttaggaggggataggaggtgagattttacttttcttttttaaattacggaccatataacatatttttttaaaat 10028205  T
Q  216 atattaagtgt 226  Q
    | |||||||||    
T  10028206 aaattaagtgt 10028216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 28083744 - 28083848
Alignment:
Q  123 ggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 221  Q
    ||||| || ||||||||||||||| ||||||||||||| |||  |||  ||||| |||||||||||| ||| |||| |||||||| ||||||||| ||||    
T  28083744 ggtgtgttcggattgagggtttaggaggggaagggaggagagattttgtttttcttttttaaattacagacaatataacatgtttctctaaaataaatta 28083843  T
Q  222 agtgt 226  Q
    |||||    
T  28083844 agtgt 28083848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 224
Target Start/End: Complemental strand, 40990427 - 40990324
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 219  Q
    ||||||| ||||||||||||||| || || |||||||||| ||| ||||  ||||| ||||||||||||||||||||| |||||||| | ||||||| ||    
T  40990427 agggtgtgtttggattgagggtt-aggagaggaagggaggagagagtttgtttttcttttttaaattacggactatataacatgtttctttaaaataaat 40990329  T
Q  220 taagt 224  Q
    |||||    
T  40990328 taagt 40990324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 124 - 225
Target Start/End: Complemental strand, 37923320 - 37923217
Alignment:
Q  124 gtgtatttggattgagggtttagaag-gggaagggaggga-gggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 221  Q
    |||| |||||||| ||||||||| || ||||||||| ||| ||||||| | ||  |||||||||||| |||||||| |||||||||||||||||| ||||    
T  37923320 gtgtgtttggattaagggtttaggagagggaagggatggaagggtttaatatttatttttaaattacagactatataacatgtttttctaaaataaatta 37923221  T
Q  222 agtg 225  Q
    ||||    
T  37923220 agtg 37923217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 31543070 - 31543160
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgttttt 208  Q
    ||||||| | ||||||| |||||||||  |||||||||||||| |||||||||||||| |||||||||||||||   ||||| ||||||||    
T  31543070 taagggtatgtttggatggagggtttaagaggggaagggaggggagggtttacttttcatttttaaattacggaaactatgaaatgttttt 31543160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 226
Target Start/End: Original strand, 37032415 - 37032485
Alignment:
Q  156 ggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    |||||||| ||||| ||||| |||||||||||| |||||||| |||||||||| ||||||| |||||||||    
T  37032415 ggagggagagtttatttttcttttttaaattacagactatataacatgtttttttaaaataaattaagtgt 37032485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 41103709 - 41103644
Alignment:
Q  161 gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    ||||||||||||||| ||||||||||||   |||||| |||||||||||||||||| |||||||||    
T  41103709 gagggtttacttttcttttttaaattacaagctatataacatgtttttctaaaataaattaagtgt 41103644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 119 - 189
Target Start/End: Complemental strand, 8815387 - 8815316
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacg 189  Q
    ||||||||| |||||||||||||||||| ||||| ||||| ||||||||| ||||||  |||||||||||||    
T  8815387 taagggtgtgtttggattgagggtttaggagggggagggaggggagggttcacttttaatttttaaattacg 8815316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 222
Target Start/End: Original strand, 11785565 - 11785628
Alignment:
Q  159 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 222  Q
    ||||| ||||||||||| ||||||||||| | ||||||| |||||||||||||||||| |||||    
T  11785565 gggagagtttacttttcttttttaaattatgaactatataacatgtttttctaaaatacattaa 11785628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 33922533 - 33922616
Alignment:
Q  129 tttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    |||||||||||||||||| | |||||||||| |    |||||||||| |||||||||| |||||||||| |||| ||||| |||||||    
T  33922533 tttggattgagggtttaggaagggaagggagag----tttacttttcttttttaaattccggactatataacatatttttttaaaata 33922616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 36309079 - 36309018
Alignment:
Q  129 tttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacg 189  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||| | |||||||||||    
T  36309079 tttggatggagggtttaggaggggaagggaggggagggtttacttttcatctttaaattacg 36309018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 3726863 - 3726935
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaaggg-agggagggtttacttttcgtttttaaattacggac 192  Q
    ||||||| ||||||| |||||||||| |||||||||| | ||| |||||| ||||| ||||||||||||||||    
T  3726863 agggtgtgtttggatggagggtttaggaggggaagggaaaggacggtttatttttcatttttaaattacggac 3726935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 11575415 - 11575494
Alignment:
Q  129 tttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgttttt 208  Q
    ||||||| |||| ||||| || ||||||||||||||||||||||||| || |||||||| |||   ||||| ||||||||    
T  11575415 tttggatggaggatttaggagaggaagggagggagggtttacttttcattcttaaattaaggatactatgaaatgttttt 11575494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 192
Target Start/End: Complemental strand, 11785777 - 11785698
Alignment:
Q  114 aaatctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    |||||| ||||||| ||||||| |||||||||| |||| ||| || ||||||||||  ||||| ||||||||||||||||    
T  11785777 aaatcttagggtgtgtttggatggagggtttaggagggtaagagaagggagggtttgattttcatttttaaattacggac 11785698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 16024400 - 16024326
Alignment:
Q  118 ctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    ||||| |||| ||||||| |||| ||||| ||||||||||| ||||| ||||||||||| ||||||||||||||||    
T  16024400 ctaagagtgtgtttggatggaggatttaggaggggaagggaggggagagtttacttttc-tttttaaattacggac 16024326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 188
Target Start/End: Original strand, 43732676 - 43732747
Alignment:
Q  118 ctaagggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattac 188  Q
    |||||||||| |||||||||||||||||| |||||||||||| |||||  | ||||||  ||||||||||||    
T  43732676 ctaagggtgtgtttggattgagggtttaggaggggaagggagaggaggactcacttttattttttaaattac 43732747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 7394706 - 7394636
Alignment:
Q  120 aagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacg 189  Q
    |||| ||| |||||||||||||||||| ||||||||||| |||| |||| ||||||  |||||||||||||    
T  7394706 aaggatgtgtttggattgagggtttaggaggggaagggaggggatggttcacttttattttttaaattacg 7394636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 12022142 - 12022212
Alignment:
Q  121 agggtgtatttggattgagggttt-agaaggggaagggaggg-agggtttacttttcgtttttaaattacg 189  Q
    ||||||| || |||| |||||||| ||||||||||||||||| |||| ||||||||| |||||||||||||    
T  12022142 agggtgtgttaggatggagggtttgagaaggggaagggaggggagggcttacttttcttttttaaattacg 12022212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 30365376 - 30365306
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattac 188  Q
    ||||||||| ||||||| |||| |||||||||| ||||||||| |||| || |||||| ||||||||||||    
T  30365376 taagggtgtgtttggatggaggatttagaagggtaagggaggggagggcttccttttcttttttaaattac 30365306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 41103502 - 41103568
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaa 184  Q
    ||||||||| ||||||| |||||||||| |||||||| ||||| |||||||  ||||||||||||||    
T  41103502 taagggtgtgtttggatggagggtttaggaggggaagagaggggagggtttgattttcgtttttaaa 41103568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 208
Target Start/End: Complemental strand, 16653166 - 16653105
Alignment:
Q  148 aggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgttttt 208  Q
    ||||||||||||| ||||||||| ||||| ||||||||||||||||  ||||| ||||||||    
T  16653166 aggggaagggaggagagggtttaattttcatttttaaattacggacattatgaaatgttttt 16653105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 31738440 - 31738529
Alignment:
Q  138 agggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    ||||||||| |||||||| || ||||| ||||  ||||  |||||||||||| |||||||| |||||||| |||| |||| |||||||||    
T  31738440 agggtttaggaggggaagagaagggagagttttttttttttttttaaattacagactatataacatgtttctctagaataaattaagtgt 31738529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 8815141 - 8815213
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggac 192  Q
    ||||||| ||||||| |||||||||| |||||||| |||| || |  ||||||||| ||||||||||||||||    
T  8815141 agggtgtgtttggatggagggtttaggaggggaagagaggtgatgacttacttttcttttttaaattacggac 8815213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 31738667 - 31738595
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 192  Q
    ||||||| ||||||| |||||||||| ||||||||  |||| ||||||||  |||| ||||||||||||||||    
T  31738667 agggtgtgtttggatggagggtttaggaggggaagaaaggggagggtttaaatttcatttttaaattacggac 31738595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 226
Target Start/End: Complemental strand, 29358587 - 29358477
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaaggga--gggagggtttac-ttttcgtttttaaattacggactatatgacatgtttttctaaaat 215  Q
    ||||| ||| ||||||||||| |||||  ||||||| |||   |||| |||||| ||||| |||||||| |||||| ||||| |||| |||||||| |||    
T  29358587 taaggatgtgtttggattgagagtttacgaggggaaaggaagaggagtgtttactttttcatttttaaactacggattatataacatatttttctagaat 29358488  T
Q  216 atattaagtgt 226  Q
    | |||||||||    
T  29358487 aaattaagtgt 29358477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 30365130 - 30365236
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 219  Q
    ||||||| |||||||||||||||||| ||| ||| ||| ||||| ||| ||||||  ||||||||||||| || | || | || ||||| || |||| ||    
T  30365130 agggtgtgtttggattgagggtttaggaggagaaaggaggggagagttcacttttaatttttaaattacgaacaacataaaatatttttttagaataaat 30365229  T
Q  220 taagtgt 226  Q
    |||||||    
T  30365230 taagtgt 30365236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 34634389 - 34634315
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    ||||||||| ||||||| ||| |||||| ||||||||||| | ||||||| | ||||  ||||||||||||||||    
T  34634389 taagggtgtgtttggatggagagtttaggaggggaagggatgtgagggttcattttttatttttaaattacggac 34634315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 4247764 - 4247699
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggag-----ggagggtttacttttcgttttt 181  Q
    ||||||| |||||||||| ||||||| ||||||||||||     |||||||||||||||| |||||    
T  4247764 agggtgtgtttggattgaaggtttaggaggggaagggaggtagaggagggtttacttttctttttt 4247699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 16024155 - 16024260
Alignment:
Q  123 ggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatg-tttttctaaaatatatt 220  Q
    ||||| |||||||||||||||||| | ||||||||| ||||| | | | |||| |||||||||||||| || |||| | ||| ||||| | ||||| |||    
T  16024155 ggtgtgtttggattgagggtttaggaagggaagggaggggagagctcagtttttgtttttaaattacgaacaatataaaatgattttttttaaataaatt 16024254  T
Q  221 aagtgt 226  Q
    ||||||    
T  16024255 aagtgt 16024260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 30582030 - 30581985
Alignment:
Q  148 aggggaagggaggg-agggtttacttttcgtttttaaattacggac 192  Q
    |||||||||||||| |||| ||||||||| ||||||||||||||||    
T  30582030 aggggaagggaggggagggcttacttttcttttttaaattacggac 30581985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 161
Target Start/End: Complemental strand, 8672038 - 8671998
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg 161  Q
    ||||||| |||||||||||| ||||||||||||||| ||||    
T  8672038 agggtgtgtttggattgaggatttagaaggggaaggtaggg 8671998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 30664407 - 30664467
Alignment:
Q  166 tttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    |||| ||||| |||||||||| | |||| ||| ||||||||||| |||||| |||||||||    
T  30664407 tttatttttcttttttaaattgcagactttataacatgtttttcaaaaataaattaagtgt 30664467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 226
Target Start/End: Complemental strand, 41110567 - 41110459
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 217  Q
    ||||||||| ||||||||||||||||   |||||||||||| ||| ||||||||||||||||||||||||||||||| || ||||||||||| ||||||     
T  41110567 taagggtgtgtttggattgagggtttgtgaggggaagggagaggaaggtttacttttcgtttttaaattacggactagataacatgtttttcgaaaataa 41110468  T
Q  218 attaagtgt 226  Q
    |||||||||    
T  41110467 attaagtgt 41110459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 226
Target Start/End: Original strand, 21773778 - 21773888
Alignment:
Q  117 tctaagggtgtatttggattgagggtttagaaggggaagggaggga-gggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaat 215  Q
    ||||||||| | |||||||||| ||||||| ||||||||||| ||| |||| |||||||| ||| ||||||||||||||||| |||||||||||||||||    
T  21773778 tctaagggtatgtttggattgaaggtttaggaggggaagggaaggaagggtatacttttcttttctaaattacggactatataacatgtttttctaaaat 21773877  T
Q  216 atattaagtgt 226  Q
    | |||||||||    
T  21773878 aaattaagtgt 21773888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 222
Target Start/End: Original strand, 24560213 - 24560319
Alignment:
Q  117 tctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaat 215  Q
    ||||||||||| |||||||| ||||||||| |||||||||||||| |||||||  ||||| ||||||||||||||||||| | |||||||||||||||||    
T  24560213 tctaagggtgtgtttggattaagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacggactatgtaacatgtttttctaaaat 24560312  T
Q  216 atattaa 222  Q
    | |||||    
T  24560313 aaattaa 24560319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 30200343 - 30200229
Alignment:
Q  117 tctaagggtgtatttggattgaggg----tttagaaggggaagggaggga-gggtttacttttcgtttttaaattacggactatatgacatgtttttcta 211  Q
    ||||||||||| |||||||||||||    | ||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  30200343 tctaagggtgtgtttggattgagggagggtataggaggggaagggagggaagggtttacttttcttttttaaattacggactatataacatgtttttcta 30200244  T
Q  212 aaatatattaagtgt 226  Q
    ||||| || ||||||    
T  30200243 aaataaatcaagtgt 30200229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 119 - 226
Target Start/End: Complemental strand, 25655218 - 25655110
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 217  Q
    ||||||||| ||||||||||||||| |  ||| |||||||||| ||||||||  |||| ||||||||||||||||||||| ||||||||||||||||||     
T  25655218 taagggtgtgtttggattgagggttgaagaggagaagggaggggagggtttaactttcatttttaaattacggactatataacatgtttttctaaaataa 25655119  T
Q  218 attaagtgt 226  Q
    |||||||||    
T  25655118 attaagtgt 25655110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 14897984 - 14898082
Alignment:
Q  129 tttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    ||||||||||| |||||| |||||||||||| |||   |||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  14897984 tttggattgagagtttaggaggggaagggagaggaaattttacttttcttttttaaattacagactatatgacatgtttttctaaaataaattaagtgt 14898082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 28582753 - 28582647
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 219  Q
    ||||||| |||||| ||||| ||||| |||||||||||||| |||||||||||||| |||||||||||||||| |||| |||||||||||||| ||| ||    
T  28582753 agggtgtgtttggactgaggatttaggaggggaagggaggggagggtttacttttcttttttaaattacggacgatataacatgtttttctaagataaat 28582654  T
Q  220 taagtgt 226  Q
     ||||||    
T  28582653 caagtgt 28582647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 118 - 226
Target Start/End: Original strand, 651737 - 651837
Alignment:
Q  118 ctaagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 217  Q
    |||||||||| |||||||||||||||||| |||||        ||||||||||||||| |||||||||||  |||||||| ||||||||||||||||||     
T  651737 ctaagggtgtgtttggattgagggtttaggagggg--------gagggtttacttttcttttttaaattatagactatataacatgtttttctaaaataa 651828  T
Q  218 attaagtgt 226  Q
    |||||||||    
T  651829 attaagtgt 651837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 220633 - 220545
Alignment:
Q  129 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    ||||||| |||||||||| ||| |||||||||| ||  |||||||||| ||||||||||||||||||| | ||||||||||||||||||    
T  220633 tttggatggagggtttaggaggagaagggaggggagaatttacttttcttttttaaattacggactatgtaacatgtttttctaaaata 220545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 24253966 - 24253894
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 192  Q
    ||||||| ||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  24253966 agggtgtgtttggatggagggtttagaaggggaagggagggaaggatttacttttcttttttaaattacggac 24253894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 34641237 - 34641162
Alignment:
Q  118 ctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    |||||||||| ||||||| |||||||||| ||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  34641237 ctaagggtgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttcttttttaaattacggac 34641162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 46204894 - 46204992
Alignment:
Q  129 tttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    ||||||| |||||||||| ||| |||| || | ||| ||||||||||| ||||||||||| | ||||||| |||||||||||||||||| |||||||||    
T  46204894 tttggatcgagggtttagcaggagaagagatgagagtgtttacttttcttttttaaattatgaactatataacatgtttttctaaaataaattaagtgt 46204992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 226
Target Start/End: Complemental strand, 18654847 - 18654738
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttc-gtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    |||| |||| |||| ||||||||||||| ||||||||||| ||||| ||||  ||| |  ||||||||||||||||||||| |||||||| |||||||||    
T  18654847 taagagtgtgtttgaattgagggtttaggaggggaagggaggggagagtttgttttactttttttaaattacggactatataacatgtttctctaaaata 18654748  T
Q  217 tattaagtgt 226  Q
     |||||||||    
T  18654747 aattaagtgt 18654738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 2387965 - 2387898
Alignment:
Q  159 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    ||||||||||||||||| ||| ||||| |||| |||||| |||||||||||||||||| |||||||||    
T  2387965 gggagggtttacttttcttttctaaatcacggtctatataacatgtttttctaaaataaattaagtgt 2387898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 24560461 - 24560373
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 208  Q
    ||||||| ||||||| |||||||||| ||||||| ||| ||||| ||||||||||| |||||||||||| |||  ||||| ||||||||    
T  24560461 agggtgtgtttggatggagggtttaggaggggaacggatgggagagtttacttttcatttttaaattaccgacactatgaaatgttttt 24560373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 192
Target Start/End: Complemental strand, 26136025 - 26135969
Alignment:
Q  137 gagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggac 192  Q
    |||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||    
T  26136025 gagggtttaggaggggaagggagtggagggtttacttttcttttttaaattacggac 26135969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 118 - 188
Target Start/End: Original strand, 28581183 - 28581254
Alignment:
Q  118 ctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattac 188  Q
    ||||| |||| ||||||| ||||||||||||| |||||||| ||||||||||| ||||| ||||||||||||    
T  28581183 ctaagagtgtgtttggatggagggtttagaagaggaagggaggggagggtttagttttcatttttaaattac 28581254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 37102383 - 37102286
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatg-tttttctaaaatatat 219  Q
    ||||||| |||||||||||||||||| |||||||||         ||||||| || ||||||||||||||||||||| ||||| ||||||||||||| ||    
T  37102383 agggtgtgtttggattgagggtttaggaggggaagg---------tttacttatcttttttaaattacggactatataacatgttttttctaaaataaat 37102293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 41110323 - 41110393
Alignment:
Q  123 ggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggac 192  Q
    ||||| ||||||| |||| ||||| ||||||||||||| || |||||||||||| ||||||||||||||||    
T  41110323 ggtgtgtttggatggaggatttaggaggggaagggaggagaaggtttacttttcatttttaaattacggac 41110393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 10748484 - 10748435
Alignment:
Q  177 tttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    ||||||||||||||| ||||| |||||||||||||||||| |||||||||    
T  10748484 tttttaaattacggagtatataacatgtttttctaaaataaattaagtgt 10748435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 12790381 - 12790478
Alignment:
Q  129 tttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    |||||||||||||||||| || ||||| ||| |  |||||||||||| |||||| |||   | |||||| ||||||||||||| |||| |||||||||    
T  12790381 tttggattgagggtttaggagaggaagagagaggaggtttacttttcttttttatattgtaggctatataacatgtttttctataataaattaagtgt 12790478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 55428615 - 55428551
Alignment:
Q  129 tttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    |||||||||||||||||| ||||||||||| |||| | |||||||||| | ||||||||||||||    
T  55428615 tttggattgagggtttaggaggggaagggaggggatgatttacttttcttctttaaattacggac 55428551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 226
Target Start/End: Complemental strand, 9312715 - 9312609
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatga---catgtttttctaaaat 215  Q
    |||||| || |||||||||||||||||| |||||| |||||||    |||  ||||| |||||||||||| |||||||| |   |||| |||||||||||    
T  9312715 taagggagtgtttggattgagggtttaggaggggaggggaggg----tttgattttcttttttaaattaccgactatataacatcatgattttctaaaat 9312620  T
Q  216 atattaagtgt 226  Q
    | |||||||||    
T  9312619 aaattaagtgt 9312609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 195
Target Start/End: Complemental strand, 6803456 - 6803370
Alignment:
Q  110 aataaaatctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactat 195  Q
    |||||| | |||| |||| |||||||||| ||||||| |||||||| |||| ||| ||||| ||||| |||||||||||| ||||||    
T  6803456 aataaactttaagtgtgtgtttggattgaaggtttaggaggggaagagaggagagagtttaattttcttttttaaattacagactat 6803370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 41040164 - 41040098
Alignment:
Q  151 ggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    |||||||||| |||||||||||||||| |||||||||||||| || || ||||| |||| |||||||    
T  41040164 ggaagggaggagagggtttacttttcgcttttaaattacggattagataacatgattttttaaaata 41040098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 216
Target Start/End: Complemental strand, 43005981 - 43005887
Alignment:
Q  123 ggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    ||||| ||||||||||||||||| ||||| |||| | | |||| |||| ||||| |||||||||| |  ||||||| |||| |||||||||||||    
T  43005981 ggtgtgtttggattgagggtttataagggaaaggaaagagaggatttaattttcttttttaaattccaaactatataacatatttttctaaaata 43005887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 54574605 - 54574502
Alignment:
Q  116 atctaagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaat 215  Q
    |||| ||||||| |||||||||||||||||| | |||||||||  |    |||  ||||| ||||| |||||| |||||||| ||| |||||||||||||    
T  54574605 atcttagggtgtgtttggattgagggtttaggaagggaagggatag----tttgtttttctttttttaattacagactatataacacgtttttctaaaat 54574510  T
Q  216 atattaag 223  Q
    | ||||||    
T  54574509 aaattaag 54574502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 24253717 - 24253789
Alignment:
Q  117 tctaagggtgtatttggattgagggtttagaaggggaaggga--gggagggtttacttttcgtttttaaatta 187  Q
    ||||||||||| |||||||||||||||||| |||| ||||||  ||||| ||| ||||||  |||||||||||    
T  24253717 tctaagggtgtgtttggattgagggtttaggagggaaagggagggggagtgttcacttttaatttttaaatta 24253789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 27542166 - 27542073
Alignment:
Q  130 ttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 222  Q
    |||||| |||||||||  ||||| |||||||| || ||||  ||||| ||||||||||| | ||||||| |||| ||||||||||||| |||||    
T  27542166 ttggatcgagggtttacgaggggcagggaggggagagtttgtttttcttttttaaattatgaactatataacatatttttctaaaataaattaa 27542073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 52474141 - 52474088
Alignment:
Q  139 gggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacgga 191  Q
    |||||||| |||||||||||| |||||||||||||||  |||||||||||||||    
T  52474141 gggtttaggaggggaagggagaggagggtttactttttatttttaaattacgga 52474088  T

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Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 18654600 - 18654672
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    ||||||| ||||||| |||||||||| |||| ||| || |||||||||||  |||| ||||||||||||||||    
T  18654600 agggtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattacggac 18654672  T

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Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 189
Target Start/End: Complemental strand, 17474452 - 17474381
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacg 189  Q
    ||||| ||| ||||||||||||||| || ||||||||||| ||||| ||| ||||||  |||||||||||||    
T  17474452 taaggatgtgtttggattgagggttgaggaggggaagggaggggagagttaacttttattttttaaattacg 17474381  T

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Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 27541939 - 27541998
Alignment:
Q  129 tttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaatta 187  Q
    |||||||||||||||||| ||||||||||||| || |||| || |||| |||||||||||    
T  27541939 tttggattgagggtttaggaggggaagggaggagatggttcacatttcatttttaaatta 27541998  T

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Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 46556182 - 46556249
Alignment:
Q  159 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    ||||| ||||| ||||| |||||||||||| |||||||| | ||||||||| |||||| ||| |||||    
T  46556182 gggagagtttaattttcttttttaaattacagactatataatatgtttttccaaaataaattgagtgt 46556249  T

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Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 188
Target Start/End: Original strand, 51819147 - 51819206
Alignment:
Q  129 tttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattac 188  Q
    ||||||| || |||||||||||||||| ||||| || |||| ||||| ||||||||||||    
T  51819147 tttggatggaaggtttagaaggggaagagaggggggatttatttttcatttttaaattac 51819206  T

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Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 5903546 - 5903604
Alignment:
Q  118 ctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttc 175  Q
    |||||||||| |||||||||||| ||||  ||||||||| | |||||||||||||||||    
T  5903546 ctaagggtgtgtttggattgaggatttaagaggggaaggcaggggagggtttacttttc 5903604  T

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Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 10943850 - 10943752
Alignment:
Q  129 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    |||||||||||||||||  |||| ||| ||||| |||||| ||||||  ||||||||||||| || ||   | |||||||| ||||||| |||||||||    
T  10943850 tttggattgagggtttatgagggaaagagaggggagggttcacttttaatttttaaattacgaacaatgcaaaatgtttttttaaaataaattaagtgt 10943752  T

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Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 52185060 - 52185118
Alignment:
Q  165 gtttacttttcgtttttaaattacggactatatgacatg-tttttctaaaatatattaa 222  Q
    ||||||||||||||||||||||||  | ||||| ||||| ||||||||||||| |||||    
T  52185060 gtttacttttcgtttttaaattacaaattatataacatgttttttctaaaataaattaa 52185118  T

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Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 25654971 - 25655039
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacg 189  Q
    ||||||||||| ||| |||  ||||| |||||||||||||| |||||||||||||| |||||| ||||||    
T  25654971 agggtgtatttagatggaga-tttaggaggggaagggaggggagggtttacttttcatttttatattacg 25655039  T

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Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 30200127 - 30200176
Alignment:
Q  159 gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 208  Q
    ||||||||||| ||||| ||||||||||||||||  ||||| ||||||||    
T  30200127 gggagggtttagttttcatttttaaattacggacactatgaaatgttttt 30200176  T

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Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 37102188 - 37102237
Alignment:
Q  159 gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 208  Q
    ||||||||||| ||||| ||||||||||||||||  ||||| ||||||||    
T  37102188 gggagggtttagttttcatttttaaattacggacactatgaaatgttttt 37102237  T

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Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 40464115 - 40464010
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 219  Q
    ||||||||| | |||||||||||||  || ||||  ||||| || ||||||||||| ||| ||||| | || ||| || |||| ||||||||||||| ||    
T  40464115 agggtgtatctcgattgagggtttatgagaggaatagaggggagagtttacttttcttttctaaatcaagggctacataacatatttttctaaaataaat 40464016  T
Q  220 taagtg 225  Q
    ||||||    
T  40464015 taagtg 40464010  T

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Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 52473923 - 52474016
Alignment:
Q  129 tttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 221  Q
    ||||||||||| |||| | ||||||||  | ||||| ||| | ||||| ||||||||||||||| ||||| ||||||| || ||||||| ||||    
T  52473923 tttggattgagagtttgggaggggaagaaatgggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatta 52474016  T

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Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 44412357 - 44412401
Alignment:
Q  117 tctaagggtgtatttggattgagggtttagaaggggaagggaggg 161  Q
    ||||||||||| |||| ||||||||||||| |||||||| |||||    
T  44412357 tctaagggtgtgtttgaattgagggtttaggaggggaagagaggg 44412401  T

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Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 223
Target Start/End: Original strand, 33235951 - 33236054
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 219  Q
    |||||||||||||||||||| |||||  || |||||||| |||  ||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||    
T  33235951 agggtgtatttggattgaggatttaggtggagaagggagtggaaagtttacttttcttttttaaattacggactatataacatgtttttctaaaataaat 33236050  T
Q  220 taag 223  Q
    ||||    
T  33236051 taag 33236054  T

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Target: chr6; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 124 - 216
Target Start/End: Complemental strand, 19278278 - 19278186
Alignment:
Q  124 gtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaata 216  Q
    |||| ||||||||||| |||||| |||||||||||||| |||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  19278278 gtgtgtttggattgagagtttaggaggggaagggaggggagggttta-ttttcttttttaaattacggactatataacatgtttttctaaaata 19278186  T

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Target: chr6; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 117 - 226
Target Start/End: Original strand, 14515469 - 14515577
Alignment:
Q  117 tctaagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaat 215  Q
    ||||||||||| |||||||||||||||||| ||||||||||| ||||||||||  ||||| |||||||||||||||||| ||   |||||| ||||||||    
T  14515469 tctaagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacggactagat--aatgtttctctaaaat 14515566  T
Q  216 atattaagtgt 226  Q
    | |||||||||    
T  14515567 aaattaagtgt 14515577  T

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Target: chr6; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 2893632 - 2893736
Alignment:
Q  123 ggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatatta 221  Q
    ||||| |||||||||||||||| | | |||||  ||| |||| |||||||||||||||||||| ||| |||||||| |||||||||||||||||| ||||    
T  2893632 ggtgtgtttggattgagggtttgggaagggaaatgagcggagagtttacttttcgtttttaaactacagactatataacatgtttttctaaaataaatta 2893731  T
Q  222 agtgt 226  Q
    |||||    
T  2893732 agtgt 2893736  T

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Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 119 - 226
Target Start/End: Complemental strand, 16738241 - 16738134
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatata 218  Q
    ||||||| | |||||||||||||||||| | |||||||  ||||| ||||||||||| |||||||||||| || ||||| | |||||||||||||||| |    
T  16738241 taagggtttgtttggattgagggtttaggatgggaaggaggggagagtttacttttcttttttaaattacagattatataaaatgtttttctaaaataaa 16738142  T
Q  219 ttaagtgt 226  Q
     |||||||    
T  16738141 gtaagtgt 16738134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 30487546 - 30487443
Alignment:
Q  124 gtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 222  Q
    |||| ||| |||||||||||||| |||||||||||| |||||||||| ||||  |||||||| |||||||||||| |||||||||| ||||||| || ||    
T  30487546 gtgtgtttcgattgagggtttaggaggggaagggagtggagggtttagttttattttttaaactacggactatataacatgtttttataaaataaatcaa 30487447  T
Q  223 gtgt 226  Q
    ||||    
T  30487446 gtgt 30487443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 12811224 - 12811118
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 219  Q
    ||||||| |||||||||||||||||| | |||||| ||||| |||| ||||||||| | |||||||||  |||||||| | |||||||||||||||| ||    
T  12811224 agggtgtgtttggattgagggtttaggatgggaagagaggggagggattacttttcttctttaaattagagactatataatatgtttttctaaaataaat 12811125  T
Q  220 taagtgt 226  Q
    |||||||    
T  12811124 taagtgt 12811118  T

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Target: chr6; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 119 - 207
Target Start/End: Original strand, 10818227 - 10818316
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttt 207  Q
    ||||||||| |||||||||||||||||| ||||||||||| ||||  ||||| ||||| |||||||||||||||| |||| |||||||||    
T  10818227 taagggtgtgtttggattgagggtttaggaggggaagggaggggattgtttatttttcttttttaaattacggacaatataacatgtttt 10818316  T

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Target: chr6; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 4097754 - 4097650
Alignment:
Q  124 gtgtatttggattgagggtttagaaggggaagggaggga-gggtttacttttcgtttttaaattacggactatatgaca-tgtttttctaaaatatatta 221  Q
    |||| |||||||||||||||||  ||||||||||||||| ||||| ||||||| |||||||||||||||| |||| ||| | |||||| |||||| ||||    
T  4097754 gtgtgtttggattgagggtttaagaggggaagggagggaagggttcacttttcttttttaaattacggacaatataacattttttttccaaaataaatta 4097655  T
Q  222 agtgt 226  Q
    |||||    
T  4097654 agtgt 4097650  T

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Target: chr6; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 10818459 - 10818364
Alignment:
Q  122 gggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 217  Q
    |||||| ||||||||||| |||||| ||||| |||||||| |||||||||||||| ||||||||||||||||  ||||| |||||||| ||||||||    
T  10818459 gggtgtgtttggattgagagtttaggaggggtagggaggggagggtttacttttcatttttaaattacggacactatgaaatgttttt-taaaatat 10818364  T

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Target: chr6; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 31849121 - 31849216
Alignment:
Q  132 ggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    ||||||||||||||  |||||||||||||| |||||||| ||||| |||||||| ||| |||||||| |||| ||||||||||||| || ||||||    
T  31849121 ggattgagggtttaagaggggaagggaggggagggtttagttttcttttttaaactacagactatataacatatttttctaaaataaatcaagtgt 31849216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 9721136 - 9721210
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    ||||||||| |||||||||| ||||||| ||||||||||| ||||||||||| ||||| ||||||||||||||||    
T  9721136 taagggtgtgtttggattgaaggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggac 9721210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 2892844 - 2892741
Alignment:
Q  124 gtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 222  Q
    |||| |||| || |||||||| ||||| |||||||||| ||  |||||||||| |||||||| |||||||||||| ||| |||||||||||||| ||| |    
T  2892844 gtgtgtttgaatggagggtttggaaggcgaagggaggggagaatttacttttcttttttaaactacggactatataacacgtttttctaaaataaattta 2892745  T
Q  223 gtgt 226  Q
    ||||    
T  2892744 gtgt 2892741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 21607085 - 21606982
Alignment:
Q  124 gtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 222  Q
    |||| |||||||||||||||||| |||||||| |||  ||  |||||| |||||||||||||||||  ||||||| | |||||||||||||||| || ||    
T  21607085 gtgtgtttggattgagggtttaggaggggaagagagatgaatgtttacatttcgtttttaaattacaaactatattatatgtttttctaaaataaataaa 21606986  T
Q  223 gtgt 226  Q
    ||||    
T  21606985 gtgt 21606982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 9719029 - 9719103
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    |||| |||| |||||||||||||||||| ||||||||||| |||||| |||| ||||| ||||||||||||||||    
T  9719029 taagcgtgtgtttggattgagggtttaggaggggaagggaggggaggatttatttttcatttttaaattacggac 9719103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 119 - 199
Target Start/End: Complemental strand, 1300866 - 1300785
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatga 199  Q
    ||||||||| ||||||| |||||||| ||||  ||| |||||| |||||||||||||| |||||||||||||||| ||||||    
T  1300866 taagggtgtgtttggatggagggtttggaagatgaatggaggggagggtttacttttcatttttaaattacggacaatatga 1300785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 122 - 208
Target Start/End: Complemental strand, 9719273 - 9719186
Alignment:
Q  122 gggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 208  Q
    |||||| |||||||||||||||||  |||||||| || ||| ||||||| ||||| |||||||||| |||||||||| ||||| ||||    
T  9719273 gggtgtgtttggattgagggtttatgaggggaagagaggggtgggtttaattttcttttttaaattccggactatataacatgctttt 9719186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 5585486 - 5585440
Alignment:
Q  180 ttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||    
T  5585486 ttaaattacggactatataacatgtttttctaaaataaattaagtgt 5585440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 6034275 - 6034210
Alignment:
Q  161 gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    |||| |||||||||| |||||||||| | |||| ||| |||||||||||||||||| |||||||||    
T  6034275 gaggatttacttttcttttttaaattgcagactgtataacatgtttttctaaaataaattaagtgt 6034210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 30487304 - 30487373
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaatta 187  Q
    ||||||||| ||||||| |||||||||| ||||||||||| ||||||||| ||||||| || ||||||||    
T  30487304 taagggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcattgttaaatta 30487373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 1390317 - 1390424
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaaggg-agggagggtttacttttcgtttttaaattacggactatatgacatgttt-ttctaaaata 216  Q
    ||||||||| ||||||| |||||||||  |||||||| | || |||  |||| ||||| |||| |||||||||||||| | |||||||| ||||||||||    
T  1390317 taagggtgtgtttggatggagggtttatgaggggaagagcagagagaatttaattttctttttaaaattacggactatgtaacatgtttattctaaaata 1390416  T
Q  217 tattaagt 224  Q
     |||||||    
T  1390417 aattaagt 1390424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 15323225 - 15323331
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 219  Q
    ||||||| |||||||||||||||||| ||||||||||||| ||| | | ||||||  ||||||||||||| || || | | || | ||| ||||||| ||    
T  15323225 agggtgtgtttggattgagggtttaggaggggaagggaggagagcgctcacttttattttttaaattacgaacaatgtaaaatatatttttaaaataaat 15323324  T
Q  220 taagtgt 226  Q
    |||||||    
T  15323325 taagtgt 15323331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 15353364 - 15353433
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacg 189  Q
    ||||||| |||||||||||||||||| ||||||||||||| ||| | | ||||||  |||||||||||||    
T  15353364 agggtgtgtttggattgagggtttaggaggggaagggaggagagcgctcacttttattttttaaattacg 15353433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 4097231 - 4097307
Alignment:
Q  117 tctaagggtgtatttggattgagggtttagaaggggaagggag-ggagggtttacttttcgtttttaaattacggac 192  Q
    ||||||||||| |||||||||||||||||| ||||||||| ||  ||| ||||||||||  ||||| ||| ||||||    
T  4097231 tctaagggtgtgtttggattgagggtttaggaggggaaggaagatgagagtttacttttattttttgaatcacggac 4097307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 214
Target Start/End: Complemental strand, 9298735 - 9298636
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg------agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaa 214  Q
    ||||||| |||||||  |||| |||| ||||||||||||||      ||||||||||||||  |||||||||||||||  ||||| |||||||| |||||    
T  9298735 agggtgtgtttggatgaaggggttaggaggggaagggaggggaggggagggtttacttttcaattttaaattacggacattatgaaatgtttttttaaaa 9298636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 13583777 - 13583825
Alignment:
Q  178 ttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    ||||||||||| || ||||| |||||||||||||||||| |||||||||    
T  13583777 ttttaaattacagattatataacatgtttttctaaaataaattaagtgt 13583825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 188
Target Start/End: Original strand, 19278042 - 19278102
Alignment:
Q  129 tttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattac 188  Q
    ||||||| |||||||||| ||||||||| ||| ||| ||||||||||| ||||||||||||    
T  19278042 tttggatggagggtttaggaggggaaggaaggagagagtttacttttcatttttaaattac 19278102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 226
Target Start/End: Original strand, 23090993 - 23091101
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatat 217  Q
    ||||||||| |||||||||| ||||||| ||||||||||| ||||||| | ||||||   |||||||||||| || || | | |||| ||| |||| ||     
T  23090993 taagggtgtgtttggattgaaggtttaggaggggaagggaggggagggctcacttttatcttttaaattacgaacaatctaaaatgtatttttaaactaa 23091092  T
Q  218 attaagtgt 226  Q
    |||||||||    
T  23091093 attaagtgt 23091101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 23091195 - 23091131
Alignment:
Q  129 tttggattgagggtttagaaggggaaggga-gggagggtttacttttc-gtttttaaattacgga 191  Q
    ||||||| |||||||||| ||||||||||| ||||||| |||||||||  |||||||||||||||    
T  23091195 tttggatggagggtttaggaggggaagggaggggagggcttacttttctttttttaaattacgga 23091131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 14515715 - 14515648
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaatta 187  Q
    ||||||| ||||||| |||||||||| ||||||||| | |||||||||||  |||| |||||||||||    
T  14515715 agggtgtgtttggatggagggtttaggaggggaaggaaagggagggtttagatttcatttttaaatta 14515648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 33041473 - 33041576
Alignment:
Q  124 gtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 222  Q
    |||| ||||||||| |||||||| || |||| |||||| ||  |||| ||||| |||||||||||  |||||||| |  ||||||| ||||||| |||||    
T  33041473 gtgtgtttggattgggggtttaggagaggaaaggaggggagaatttatttttcatttttaaattatagactatataatgtgtttttttaaaataaattaa 33041572  T
Q  223 gtgt 226  Q
    ||||    
T  33041573 gtgt 33041576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 33236197 - 33236122
Alignment:
Q  118 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 192  Q
    |||||||||||||||||| ||| |||||  || |||| |||||| || | ||||||||| ||||||||||||||||    
T  33236197 ctaagggtgtatttggatggagagtttatgagaggaaaggaggggagagattacttttcatttttaaattacggac 33236122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 9051778 - 9051736
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaagggaggg 161  Q
    ||||||||| |||||||||||||||||  ||||||||||||||    
T  9051778 taagggtgtgtttggattgagggtttaagaggggaagggaggg 9051736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 665839 - 665907
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaatta 187  Q
    ||||||||| ||||||| |||||||||| |||||||| || ||||||||| | ||||| |||||||||||    
T  665839 taagggtgtgtttggat-gagggtttaggaggggaagtgaggggagggttcatttttcatttttaaatta 665907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 1300658 - 1300707
Alignment:
Q  159 gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 208  Q
    |||||||||||||||  |||||||||||||||| ||||| |||| |||||    
T  1300658 gggagggtttactttatgtttttaaattacggattatataacatattttt 1300707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 197
Target Start/End: Complemental strand, 2893050 - 2893013
Alignment:
Q  160 ggagggtttacttttcgtttttaaattacggactatat 197  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  2893050 ggagggtttacttttcttttttaaattacgaactatat 2893013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 14548629 - 14548670
Alignment:
Q  133 gattgagggtttagaaggggaagggagggagggtttactttt 174  Q
    |||||||||||| |||||| |||||| |||||||||||||||    
T  14548629 gattgagggtttcgaagggaaagggatggagggtttactttt 14548670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 9051529 - 9051605
Alignment:
Q  116 atctaagggtgtatttggattgagggtttagaaggggaagggagg-gagggtttacttttcgtttttaaattacgga 191  Q
    |||| ||||||  |||||||||||| ||||| |||| || ||||| || |||||||||||  |||||||||||||||    
T  9051529 atcttagggtgcgtttggattgaggatttaggagggaaatggaggagatggtttactttttttttttaaattacgga 9051605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 9721381 - 9721293
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 208  Q
    ||||||| |||| ||||||||||||  | || ||| || ||| ||||||| ||||| |||||||||| ||||| |||| ||||||||||    
T  9721381 agggtgtgtttgaattgagggtttatgaaggtaagagaggggtgggtttaattttcttttttaaattccggaccatataacatgttttt 9721293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 191
Target Start/End: Original strand, 21606883 - 21606915
Alignment:
Q  159 gggagggtttacttttcgtttttaaattacgga 191  Q
    ||||||||||||||||| |||||||||||||||    
T  21606883 gggagggtttacttttcatttttaaattacgga 21606915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 34176397 - 34176441
Alignment:
Q  182 aaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    |||||||||| ||||| |||||||||||||||||| || ||||||    
T  34176397 aaattacggattatataacatgtttttctaaaataaatcaagtgt 34176441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 124 - 215
Target Start/End: Original strand, 1175 - 1267
Alignment:
Q  124 gtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaat 215  Q
    |||| |||||||||||||||||| |||||||| ||||| || ||||||||||| ||||||||||||||||||| | ||||||| |||||||||    
T  1175 gtgtgtttggattgagggtttaggaggggaagagaggggagagtttacttttcttttttaaattacggactatgtaacatgttattctaaaat 1267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 210
Target Start/End: Complemental strand, 1644 - 1552
Alignment:
Q  119 taagggtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgtttttct 210  Q
    ||||||||| |||| ||||||||||||| || |||| ||| ||||||| | ||||||  ||||||||||||| || || | | ||||||||||    
T  1644 taagggtgtgtttgaattgagggtttaggagaggaatggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttct 1552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 6584 - 6690
Alignment:
Q  121 agggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 219  Q
    ||||||| |||||||||| | ||||| ||| |||||||||| |||||||||||||| |||||||||||| |||||||| || |||| |||||||||| ||    
T  6584 agggtgtgtttggattgaagttttaggaggagaagggaggggagggtttacttttcttttttaaattacagactatataacttgttattctaaaataaat 6683  T
Q  220 taagtgt 226  Q
    | |||||    
T  6684 ttagtgt 6690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 16501 - 16434
Alignment:
Q  159 gggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||||| ||||||||| |||||||||    
T  16501 gggagggtttacttttcgtttttaactcacggactatataacatgtttgtctaaaataaattaagtgt 16434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 187
Target Start/End: Original strand, 16293 - 16363
Alignment:
Q  118 ctaagggtgtatttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaatta 187  Q
    |||||||| | ||||||| |||||||||| |||| || |||||| |||||||||||||| |||||||||||    
T  16293 ctaagggtttgtttggatggagggtttaggagggaaaaggaggggagggtttacttttcatttttaaatta 16363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 17786 - 17716
Alignment:
Q  117 tctaagggtgtatttggattgagggtttagaaggggaagggagggagggtttacttttcgtttttaaattac 188  Q
    ||||||||||| ||||||| |||||||||| || ||||||||||| ||||||||||||| ||||||||||||    
T  17786 tctaagggtgtgtttggatggagggtttaggagtggaagggaggg-gggtttacttttcttttttaaattac 17716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 208
Target Start/End: Original strand, 3150 - 3235
Alignment:
Q  124 gtgtatttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggactatatgacatgttttt 208  Q
    |||| ||||||||||| |||||| ||||||||||| ||||| ||||||||||| |||||||||||| |||  ||||| ||||||||    
T  3150 gtgtgtttggattgagagtttaggaggggaagggaggggagagtttacttttcttttttaaattacagacactatgaaatgttttt 3235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 242452 - 242388
Alignment:
Q  129 tttggattgagggtttagaaggggaagggaggg-agggtttacttttcgtttttaaattacggac 192  Q
    ||||||| || |||||| ||||||||||||||| |||||||||||||| ||||||||||||||||    
T  242452 tttggatggatggtttataaggggaagggaggggagggtttacttttcttttttaaattacggac 242388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 15995 - 16044
Alignment:
Q  165 gtttacttttcgtttttaaattacggactatatgacatgtttttctaaaa 214  Q
    ||||||||||| |||||||||||| |||||||| |||||||||| |||||    
T  15995 gtttacttttcttttttaaattacagactatataacatgtttttttaaaa 16044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 184843 - 184779
Alignment:
Q  129 tttggattgagggtttagaaggggaaggga-gggagggtttacttttcgtttttaaattacggac 192  Q
    ||||||| |||||||||| |||| |||||| ||||||||||||| ||| ||||||||||| ||||    
T  184843 tttggatggagggtttaggagggaaagggaagggagggtttactattcttttttaaattatggac 184779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 18811 - 18876
Alignment:
Q  160 ggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
    |||||||||| ||||| ||||||||| || |||||||| |||||| ||||||||||| |||| ||||    
T  18811 ggagggttta-ttttcttttttaaatgacagactatataacatgtctttctaaaataaattatgtgt 18876  T

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Target: scaffold0294 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 15320 - 15369
Alignment:
Q  177 tttttaaattacggactatatgacatgtttttctaaaatatattaagtgt 226  Q
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T  15320 tttttaaactacggattacataacatgtttttctaaaataaattaagtgt 15369  T

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