View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1836_low_133 (Length: 210)
Name: NF1836_low_133
Description: NF1836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1836_low_133 |
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Alignment Details
Target: chr8 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 17 - 192
Target Start/End: Original strand, 33198370 - 33198545
Alignment:
| Q |
17 |
agcaacaagtgtgcttttgaccagcctttcaattaactgatcttgcaagaatcatgaatgaggtgatgccaaatggtagtaaaggagtgtaggagacatt |
116 |
Q |
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| T |
33198370 |
agcaacaagtgtgcttttgaccagcctttcaattaactgatcttgcaagaatcatgaatgaggtgatgccaaatggtagtaaaggagtgtaggagacatt |
33198469 |
T |
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| Q |
117 |
tatggccaacattttcctaaattgggtttacgattttaaattgagatttaaagtcgctgttaatctcaaaatcttt |
192 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
33198470 |
tatggccaacattttcctaaattgggttaacgattttaaattgagattgaaagtcgctgttaatctcaaaatcttt |
33198545 |
T |
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