View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1836_low_31 (Length: 473)

Name: NF1836_low_31
Description: NF1836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1836_low_31
NF1836_low_31
[»] chr6 (16 HSPs)
chr6 (19-461)||(9379341-9379784)
chr6 (21-169)||(31952952-31953100)
chr6 (21-170)||(11427648-11427797)
chr6 (21-170)||(32869708-32869857)
chr6 (19-157)||(15832605-15832743)
chr6 (22-123)||(23128095-23128196)
chr6 (21-169)||(28536410-28536556)
chr6 (21-169)||(4231578-4231726)
chr6 (32-152)||(12732523-12732643)
chr6 (21-169)||(15507946-15508094)
chr6 (21-170)||(17598584-17598733)
chr6 (21-169)||(15989964-15990112)
chr6 (21-169)||(30341282-30341430)
chr6 (35-170)||(29857871-29858006)
chr6 (35-169)||(31976292-31976426)
chr6 (21-170)||(22880579-22880728)
[»] chr7 (31 HSPs)
chr7 (20-169)||(16374746-16374895)
chr7 (19-157)||(19436121-19436259)
chr7 (32-170)||(4999435-4999573)
chr7 (35-169)||(35522920-35523054)
chr7 (21-153)||(3784025-3784157)
chr7 (21-143)||(32564374-32564496)
chr7 (21-169)||(22343391-22343539)
chr7 (22-169)||(41423713-41423860)
chr7 (21-155)||(18207210-18207343)
chr7 (32-170)||(19329883-19330021)
chr7 (19-179)||(32951405-32951565)
chr7 (21-169)||(38044227-38044375)
chr7 (21-147)||(35137563-35137689)
chr7 (21-170)||(8080304-8080453)
chr7 (32-169)||(27744231-27744368)
chr7 (19-123)||(38267068-38267172)
chr7 (21-169)||(41915771-41915919)
chr7 (21-95)||(36361909-36361983)
chr7 (32-170)||(40957748-40957886)
chr7 (22-95)||(36362057-36362130)
chr7 (35-123)||(3694411-3694499)
chr7 (21-169)||(35468777-35468925)
chr7 (21-169)||(39255846-39255993)
chr7 (35-170)||(38837261-38837396)
chr7 (21-175)||(3434592-3434736)
chr7 (21-143)||(8238243-8238365)
chr7 (21-169)||(46033723-46033871)
chr7 (54-151)||(31735940-31736037)
chr7 (22-123)||(36208204-36208305)
chr7 (39-143)||(26296692-26296796)
chr7 (110-170)||(36361846-36361906)
[»] chr3 (33 HSPs)
chr3 (21-170)||(49607444-49607593)
chr3 (21-169)||(14623761-14623909)
chr3 (21-175)||(31456719-31456873)
chr3 (32-169)||(35536667-35536804)
chr3 (21-169)||(8956792-8956940)
chr3 (23-172)||(25395253-25395401)
chr3 (21-170)||(53982041-53982190)
chr3 (69-169)||(43746417-43746517)
chr3 (21-106)||(13898040-13898125)
chr3 (21-170)||(33644230-33644379)
chr3 (21-169)||(41189686-41189834)
chr3 (22-169)||(30801655-30801802)
chr3 (19-169)||(51419282-51419432)
chr3 (29-123)||(1758424-1758518)
chr3 (19-157)||(11347856-11347994)
chr3 (35-169)||(20764837-20764971)
chr3 (29-143)||(36331277-36331391)
chr3 (29-156)||(25407082-25407210)
chr3 (35-170)||(17470449-17470584)
chr3 (21-169)||(26141452-26141602)
chr3 (19-157)||(33118784-33118923)
chr3 (100-170)||(11095288-11095358)
chr3 (39-169)||(47531913-47532043)
chr3 (32-170)||(54868816-54868954)
chr3 (32-169)||(8076434-8076571)
chr3 (19-155)||(9563027-9563163)
chr3 (22-169)||(35965704-35965843)
chr3 (19-170)||(36707349-36707496)
chr3 (32-117)||(41080749-41080833)
chr3 (21-170)||(52629330-52629479)
chr3 (22-94)||(27714888-27714960)
chr3 (32-169)||(24699877-24700013)
chr3 (29-169)||(45058475-45058615)
[»] chr8 (28 HSPs)
chr8 (21-169)||(5957860-5958008)
chr8 (22-170)||(34012217-34012365)
chr8 (19-170)||(12831075-12831226)
chr8 (32-170)||(14547963-14548101)
chr8 (19-169)||(16056323-16056473)
chr8 (45-169)||(42354510-42354634)
chr8 (22-153)||(1179878-1180009)
chr8 (21-151)||(15197363-15197493)
chr8 (21-170)||(24307714-24307863)
chr8 (21-169)||(37038509-37038657)
chr8 (21-157)||(40423877-40424013)
chr8 (32-170)||(504042-504180)
chr8 (32-170)||(23122518-23122656)
chr8 (32-169)||(43414503-43414640)
chr8 (35-174)||(17443869-17444008)
chr8 (21-176)||(30479389-30479544)
chr8 (21-119)||(16383407-16383505)
chr8 (21-169)||(32032755-32032902)
chr8 (19-169)||(10284553-10284703)
chr8 (19-169)||(42221543-42221693)
chr8 (32-169)||(8841354-8841491)
chr8 (35-152)||(9122229-9122346)
chr8 (21-169)||(34307246-34307394)
chr8 (22-119)||(10621059-10621156)
chr8 (35-151)||(44507027-44507143)
chr8 (21-157)||(15048115-15048251)
chr8 (21-70)||(24307659-24307708)
chr8 (21-117)||(15258903-15258999)
[»] chr2 (31 HSPs)
chr2 (19-177)||(13438371-13438529)
chr2 (21-175)||(17473050-17473204)
chr2 (21-170)||(7465656-7465805)
chr2 (21-170)||(28863485-28863634)
chr2 (19-170)||(10249303-10249454)
chr2 (21-134)||(17819961-17820074)
chr2 (21-170)||(19930741-19930890)
chr2 (19-169)||(38732382-38732532)
chr2 (21-143)||(2997435-2997557)
chr2 (21-155)||(9058510-9058644)
chr2 (19-169)||(36168864-36169014)
chr2 (19-169)||(43490149-43490299)
chr2 (21-157)||(33436034-33436170)
chr2 (21-169)||(40613824-40613972)
chr2 (19-175)||(32505564-32505720)
chr2 (23-173)||(15428659-15428808)
chr2 (21-119)||(26891476-26891574)
chr2 (21-119)||(45097707-45097805)
chr2 (21-169)||(20700845-20700993)
chr2 (74-169)||(44152010-44152105)
chr2 (21-157)||(2533154-2533289)
chr2 (100-176)||(5574415-5574491)
chr2 (29-169)||(13365391-13365531)
chr2 (21-165)||(38273069-38273212)
chr2 (21-157)||(42257223-42257359)
chr2 (34-169)||(3737986-3738121)
chr2 (82-169)||(41758678-41758765)
chr2 (75-157)||(21301434-21301516)
chr2 (32-170)||(40701519-40701657)
chr2 (21-95)||(5574484-5574558)
chr2 (22-123)||(41575168-41575270)
[»] chr5 (26 HSPs)
chr5 (21-170)||(18520805-18520954)
chr5 (22-170)||(33149559-33149707)
chr5 (21-169)||(33825246-33825394)
chr5 (19-169)||(15409532-15409682)
chr5 (32-169)||(6679739-6679876)
chr5 (21-170)||(14831844-14831993)
chr5 (21-157)||(36732876-36733012)
chr5 (35-169)||(31009032-31009166)
chr5 (21-170)||(2740304-2740453)
chr5 (21-174)||(35943809-35943962)
chr5 (21-170)||(40145437-40145586)
chr5 (21-169)||(2252090-2252238)
chr5 (21-169)||(3921187-3921335)
chr5 (21-157)||(13811682-13811818)
chr5 (35-169)||(21370048-21370182)
chr5 (21-151)||(26720546-26720676)
chr5 (21-151)||(26990295-26990425)
chr5 (21-119)||(16327931-16328029)
chr5 (32-170)||(35785240-35785378)
chr5 (22-151)||(39557457-39557586)
chr5 (40-120)||(25831334-25831414)
chr5 (21-120)||(28177805-28177904)
chr5 (66-151)||(2177439-2177524)
chr5 (110-170)||(31132453-31132513)
chr5 (21-169)||(39688819-39688967)
chr5 (21-95)||(42414298-42414372)
[»] chr4 (34 HSPs)
chr4 (21-169)||(50052350-50052498)
chr4 (21-170)||(6034074-6034223)
chr4 (21-170)||(48182970-48183119)
chr4 (19-170)||(23608263-23608414)
chr4 (19-170)||(54473454-54473605)
chr4 (21-143)||(17983691-17983813)
chr4 (35-173)||(18768966-18769103)
chr4 (21-169)||(29547881-29548029)
chr4 (21-135)||(29589696-29589810)
chr4 (32-170)||(41236388-41236526)
chr4 (21-170)||(24995028-24995177)
chr4 (21-169)||(19670638-19670786)
chr4 (21-169)||(50526093-50526241)
chr4 (21-108)||(29977915-29978002)
chr4 (21-143)||(11511410-11511532)
chr4 (35-169)||(28480190-28480324)
chr4 (35-169)||(28481065-28481199)
chr4 (35-169)||(28481940-28482074)
chr4 (35-169)||(41823926-41824060)
chr4 (33-151)||(47104586-47104704)
chr4 (32-169)||(29239927-29240064)
chr4 (21-170)||(42044288-42044437)
chr4 (22-169)||(50813814-50813961)
chr4 (21-143)||(32766988-32767110)
chr4 (21-119)||(47986238-47986336)
chr4 (19-156)||(480382-480519)
chr4 (19-100)||(29535405-29535485)
chr4 (21-169)||(55475221-55475369)
chr4 (22-157)||(40574810-40574945)
chr4 (35-113)||(18769153-18769231)
chr4 (29-143)||(44536694-44536808)
chr4 (23-152)||(56300104-56300233)
chr4 (21-119)||(55079685-55079784)
chr4 (19-169)||(31910220-31910370)
[»] chr1 (28 HSPs)
chr1 (21-170)||(2581945-2582094)
chr1 (19-168)||(7740761-7740910)
chr1 (21-170)||(9474797-9474946)
chr1 (21-170)||(41758835-41758984)
chr1 (21-157)||(50630488-50630624)
chr1 (21-169)||(41608415-41608563)
chr1 (22-170)||(47452241-47452389)
chr1 (21-169)||(51898605-51898753)
chr1 (32-151)||(45044500-45044619)
chr1 (32-170)||(27564656-27564794)
chr1 (32-170)||(37649239-37649377)
chr1 (21-143)||(50590948-50591070)
chr1 (32-175)||(8346303-8346447)
chr1 (21-169)||(32813277-32813425)
chr1 (21-157)||(37926372-37926508)
chr1 (19-169)||(49811449-49811599)
chr1 (18-155)||(43159-43296)
chr1 (32-177)||(48716196-48716341)
chr1 (20-143)||(44332319-44332442)
chr1 (21-143)||(5958948-5959070)
chr1 (39-157)||(38632255-38632373)
chr1 (19-132)||(13414789-13414902)
chr1 (21-178)||(44454009-44454170)
chr1 (19-95)||(26440762-26440838)
chr1 (29-169)||(47748480-47748620)
chr1 (32-151)||(23597031-23597150)
chr1 (19-169)||(3302455-3302605)
chr1 (21-157)||(11152312-11152448)
[»] scaffold0018 (1 HSPs)
scaffold0018 (21-169)||(152528-152676)
[»] scaffold0237 (1 HSPs)
scaffold0237 (35-170)||(4073-4208)
[»] scaffold0321 (1 HSPs)
scaffold0321 (21-170)||(10030-10179)
[»] scaffold1268 (1 HSPs)
scaffold1268 (21-169)||(851-999)
[»] scaffold1267 (1 HSPs)
scaffold1267 (21-169)||(851-999)
[»] scaffold0316 (1 HSPs)
scaffold0316 (21-105)||(17084-17168)


Alignment Details
Target: chr6 (Bit Score: 376; Significance: 0; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 376; E-Value: 0
Query Start/End: Original strand, 19 - 461
Target Start/End: Complemental strand, 9379784 - 9379341
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaa 118  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  9379784 gacaatacatcccttgacacccatacaaaaatttgacacgtggccatgtggatctcacacaaacacattttctctttcatcttctcttttctcttcctaa 9379685  T
Q  119 tgcataaagtgtacaaggatgtatgagaa-taaagggtgttcatgtaacattattcaattacttgtaatttgtttacaatgtattaaaattttaattaat 217  Q
    ||||||| || ||||||||||||||| || | |||| ||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9379684 tgcataaggtatacaaggatgtatgataaatgaaggatgtccatataacattattcaattagttgtaatttgtttacaatgtattaaaattttaattaat 9379585  T
Q  218 ttgcttgaaactcagttaatggaatgagaactatattatatatgagagtaatctagaatcctgcggtatttttgacttatagcaatgcatgacatgagaa 317  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9379584 ttgtttgaaactcagttaatggaatgagaactatattatatatgagagtaatctagaatcctgcggtatttttgacttgtagcaatgcatgacatgagaa 9379485  T
Q  318 atgaatagctacataaaggctatttatgtaatttaactattcaacatttatataaaaacaaccaaaagcagtgttactgtattccatgtactttattcac 417  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9379484 aggaatagctacataaaggctatttatgtaatttaactattcaacatttatataaaaacaaccaaaagcagtgttactgtattccatgtactttattcac 9379385  T
Q  418 atctctcacatcatcaaacatatatatattattttagctaccta 461  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  9379384 atctctcacatcatcaaacatatatatattattttagctaccta 9379341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 31953100 - 31952952
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| ||||||||||||||| |||||| ||||| |||  |||||||| |||||||||||||| ||||||||| |||||||||| | |||||||| ||    
T  31953100 caatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactttctctttcatcttctcttctctcttcctagtg 31953001  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    |||   ||||| ||||||||||||||||||| |||||  ||||||||||    
T  31953000 catggggtgtagaaggatgtatgagaataaatggtgtctatgtaacatt 31952952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 11427648 - 11427797
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    |||||||||| ||||||||||||||||||| |||||||| | || ||||||| | ||||| |||| |||||||||  ||| ||||| | |||||||||||    
T  11427648 caatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcctaatg 11427747  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    |||   |||||||||| ||||||||||||||||||||  ||||| |||||    
T  11427748 catggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatta 11427797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 32869708 - 32869857
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||| |||||||| | || ||||| | | ||||| |||| |||||||||  ||| ||||| | |||||||||||    
T  32869708 caatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatg 32869807  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    |||   ||||||||||||||||| |||||||||||||  ||||| |||||    
T  32869808 catggggtgtacaaggatgtatgggaataaagggtgtctatgtatcatta 32869857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 157
Target Start/End: Original strand, 15832605 - 15832743
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaa 118  Q
    ||||||| |||  ||||||||||||||||||| |||||||| | || |||||||   |||||| |||||||||||||  ||| ||||| |||||||||||    
T  15832605 gacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaaatacattttctcttttttctcctcttctatcttcctaa 15832704  T
Q  119 tgcataaagtgtacaaggatgtatgagaataaagggtgt 157  Q
    |||||   |||||||||| |||||  |||||||||||||    
T  15832705 tgcatggggtgtacaagggtgtattggaataaagggtgt 15832743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 23128196 - 23128095
Alignment:
Q  22 aatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgc 121  Q
    ||||||||| ||||||||||||||||||| |||||||| | || ||||||| ||||||| |||| |||||||||  ||| ||||||| ||||||||||||    
T  23128196 aatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttctcttttctctcctcttttctcttcctaatgc 23128097  T
Q  122 at 123  Q
    ||    
T  23128096 at 23128095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 28536556 - 28536410
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| |||||||||||||||||||||| ||||||  || |||||||| | ||||||| |||| ||||||||| ||||||||||   |||||||| ||    
T  28536556 caatacaacccttgacacccacacaaaaatctgacac--ggtcatgtggaccccacacaagcacactttctcttttatcttctcttccctcttcctactg 28536459  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    |||   |||||||||| ||||||| |||||| | |||  ||||||||||    
T  28536458 catggggtgtacaagggtgtatgaaaataaatgatgtcgatgtaacatt 28536410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 21 - 169
Target Start/End: Original strand, 4231578 - 4231726
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| |||||| ||||||||||||||| |||||||||||||| |||| | | |||||  ||| |||||||||  ||||||||| | ||||||||||     
T  4231578 caatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaata 4231677  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    |||   |||||||||| ||||||  | |||| |||||  ||||||||||    
T  4231678 catggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 4231726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 32 - 152
Target Start/End: Original strand, 12732523 - 12732643
Alignment:
Q  32 ttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgta 131  Q
    ||||||||||||||||||| ||||||||||| ||||||||| |||| || |||||||||||||| |||| ||||| | |||| ||| | ||||| ||| |    
T  12732523 ttgacacccacacaaaaatctgacacgtggctatgtggatcccacataagcacattttctctttcatctcctcttctctctttctagtacataaggtgca 12732622  T
Q  132 caaggatgtatgagaataaag 152  Q
    |||  |||||||  |||||||    
T  12732623 caaaaatgtatggaaataaag 12732643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 15508094 - 15507946
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| |||||||||||||||||||||| ||||| |||||||| |||| | | |||||  ||| |||||||||  ||||||||| | ||||||||||     
T  15508094 caatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaata 15507995  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
     ||   |||||||||||||||||  | |||| |||||  ||||||||||    
T  15507994 tatggggtgtacaaggatgtatgcaattaaaaggtgtctatgtaacatt 15507946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 17598584 - 17598733
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    |||||||||  ||||||||||||||||||| |||||||| | || ||||| | | ||||| |||| |||||||||  ||| ||||| | |||||||||||    
T  17598584 caatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatg 17598683  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    |||   |||||||||| ||||||  |||||| |||||  ||||| |||||    
T  17598684 catggggtgtacaagggtgtatggaaataaaaggtgtctatgtatcatta 17598733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 15990112 - 15989964
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| |||||||||||||||||||||| ||||| |||||||| |||| | | |||||  ||| |||||||||  ||||||||| | ||||||||||     
T  15990112 caatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaata 15990013  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
     ||   |||||||||| ||||||  | |||| |||||  ||||||||||    
T  15990012 tatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 15989964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 30341430 - 30341282
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| |||||||||||||||||||||| ||||| |||||||| |||| | | |||||  ||| |||||||||  ||||||||| | ||||||||||     
T  30341430 caatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaata 30341331  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
     ||   |||||||||| ||||||  | |||| |||||  ||||||||||    
T  30341330 tatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 30341282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 35 - 170
Target Start/End: Original strand, 29857871 - 29858006
Alignment:
Q  35 acacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgtacaa 134  Q
    |||||||||||||||| |||||||| |  | ||||||| | || || |||| |||||||||  ||||||||| | ||||||||||||||   ||||||||    
T  29857871 acacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttctcttttctcttctcttctctcttcctaatgcatggggtgtacaa 29857970  T
Q  135 ggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    || |||||| ||||||| |||||  ||||| |||||    
T  29857971 gggtgtatgggaataaatggtgtctatgtatcatta 29858006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 169
Target Start/End: Original strand, 31976292 - 31976426
Alignment:
Q  35 acacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgtacaa 134  Q
    |||||||||||||||| |||||||||| ||  || | | | ||||| |||| |||||||||  ||| ||||| | ||||||||||| ||   ||||||||    
T  31976292 acacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgtatggggtgtacaa 31976391  T
Q  135 ggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    || |||||||||||||| |||||  ||||||||||    
T  31976392 gggtgtatgagaataaatggtgtctatgtaacatt 31976426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 22880728 - 22880579
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||| | |||||||| | || ||||| | | ||||| |||| |||||||||  ||| ||||| | ||||||||||     
T  22880728 caatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaata 22880629  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    |||   |||||||||| |||||| ||||||| |||||  ||||| |||||    
T  22880628 catggggtgtacaagggtgtatgggaataaatggtgtatatgtatcatta 22880579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 2e-31; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 169
Target Start/End: Complemental strand, 16374895 - 16374746
Alignment:
Q  20 acaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaat 119  Q
    |||||||||||||||||| |||||||||||| |||||||||| || ||||||||||||||| ||||  |||||||| ||||  | || | ||||||||||    
T  16374895 acaatacatcccttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcacacattctctttcatctctttttctctcttcctaat 16374796  T
Q  120 gcataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    | ||  ||||||||| | ||||||||||||||||||||  ||||||||||    
T  16374795 gtatggagtgtacaaaggtgtatgagaataaagggtgtctatgtaacatt 16374746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 19436259 - 19436121
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaa 118  Q
    ||||||||| |  ||||||||||||||||||| |||||||| | || ||||||| | || || |||| |||||||||  ||||||||||| |||||||||    
T  19436259 gacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactttctcttttctcttctcttttctcttcctaa 19436160  T
Q  119 tgcataaagtgtacaaggatgtatgagaataaagggtgt 157  Q
    |||||   |||||||||| |||||||||||||| |||||    
T  19436159 tgcatggggtgtacaagggtgtatgagaataaatggtgt 19436121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 4999573 - 4999435
Alignment:
Q  32 ttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgta 131  Q
    ||||||||||||||||||| ||| |||| | || ||||| | | |||||||||| ||||||||| |||| ||||| | ||||||||||||||   |||||    
T  4999573 ttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttctcttttatctcctcttctctcttcctaatgcatggggtgta 4999474  T
Q  132 caaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    ||||| |||||||||||||| |||||  ||||| |||||    
T  4999473 caagggtgtatgagaataaaaggtgtctatgtatcatta 4999435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 35 - 169
Target Start/End: Original strand, 35522920 - 35523054
Alignment:
Q  35 acacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgtacaa 134  Q
    |||||||||||||||| |||||||||||||| |||||| | ||||| |||| |||||||||  |||  |||| | ||||||||||| ||   ||||||||    
T  35522920 acacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttctcttttctctcttcttctctcttcctaatgtatggggtgtacaa 35523019  T
Q  135 ggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    || |||||| ||||||| |||||| ||||||||||    
T  35523020 gggtgtatgggaataaatggtgtttatgtaacatt 35523054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 153
Target Start/End: Original strand, 3784025 - 3784157
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    |||||||||  ||||||||||||||||||| |||||||| | || ||||||| | ||||| |||| |||||||||  ||| ||||| | |||||||||||    
T  3784025 caatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcctaatg 3784124  T
Q  121 cataaagtgtacaaggatgtatgagaataaagg 153  Q
    |||   ||||||||| ||||||| |||||||||    
T  3784125 catggggtgtacaagaatgtatgtgaataaagg 3784157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 21 - 143
Target Start/End: Complemental strand, 32564496 - 32564374
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| |||||||||||||||||||||| ||||| ||||| || |||| | | |||||| ||| |||||||||  ||||||||| | ||||||||||     
T  32564496 caatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaaatacactttctctttcttcttctcttctctcttcctaata 32564397  T
Q  121 cataaagtgtacaaggatgtatg 143  Q
    ||| | |||||||||| ||||||    
T  32564396 catgaggtgtacaagggtgtatg 32564374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 21 - 169
Target Start/End: Original strand, 22343391 - 22343539
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| |||||||||||||||||||||| ||||| ||| |||| |||| | | |||||  ||| |||||||||  ||||||||| | ||||||||||     
T  22343391 caatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaata 22343490  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    ||| | |||||||||| ||||||  | |||| |||||  ||||||||||    
T  22343491 catgaggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 22343539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 22 - 169
Target Start/End: Original strand, 41423713 - 41423860
Alignment:
Q  22 aatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgc 121  Q
    |||||| | ||||||||  |||||||||| ||||| |||| || || |||| |  |||| || ||||||||||| |||| ||||| | |||||||| |||    
T  41423713 aatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagcatattttctctttcatctcctcttctctcttcctagtgc 41423812  T
Q  122 ataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    ||   |||||||| | ||||||||||||||||||||| ||||||||||    
T  41423813 atggggtgtacaaaggtgtatgagaataaagggtgtttatgtaacatt 41423860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 18207210 - 18207343
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| | ||||||||||| |||||||| | ||||||||| | ||| | | ||||||| |||| ||||||||| |||| ||||| | |||||||| ||    
T  18207210 caatacacctcttgacacccatacaaaaatctaacacgtggc-acgtgaaccccacacaagcacactttctctttcatctcctcttctctcttcctagtg 18207308  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggt 155  Q
     ||| ||||||||||| ||||||| ||||||||||    
T  18207309 gatagagtgtacaagggtgtatgataataaagggt 18207343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 19329883 - 19330021
Alignment:
Q  32 ttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgta 131  Q
    ||||||||||||||||||| ||||||||   || ||||| | | ||||| |||| |||||||||  ||| ||||| | ||||||||||||||   |||||    
T  19329883 ttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgta 19329982  T
Q  132 caaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    ||||| |||||| |||||||||||||  ||||| |||||    
T  19329983 caagggtgtatgggaataaagggtgtctatgtatcatta 19330021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 179
Target Start/End: Complemental strand, 32951565 - 32951405
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaa 118  Q
    |||||||||||| || ||| |||||||||||| | |||||| | || ||||| | | ||||| |||| |||||||||  ||| ||||| | |||||||||    
T  32951565 gacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaa 32951466  T
Q  119 tgcataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacattattcaattac 179  Q
    | |||   |||||||||| ||||||||||||| ||||||  ||||| ||||| || |||||    
T  32951465 tacatggggtgtacaagggtgtatgagaataaggggtgtctatgtatcattactctattac 32951405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 169
Target Start/End: Original strand, 38044227 - 38044375
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| ||||||||| |||||||||||| ||||| || ||||| |||| | | |||||  ||| |||||||||  ||||||||||| ||||||||||     
T  38044227 caatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacactttctctttcttcttctcttttctcttcctaata 38044326  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    |||   |||||||||| ||||||  | |||| |||||  ||||||||||    
T  38044327 catggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 38044375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 35137563 - 35137689
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||| | |||||| | || ||||| | | |||||||||| |||||||||  ||| ||||| | |||||||||||    
T  35137563 caatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactttctcttttctctcctcttctctcttcctaatg 35137662  T
Q  121 cataaagtgtacaaggatgtatgagaa 147  Q
    |||    ||||||||| ||||||||||    
T  35137663 catgggatgtacaagggtgtatgagaa 35137689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 8080453 - 8080304
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || |||||||| ||| |||||| |||||||| | || ||||| | | ||||| |||| |||||||||  ||| ||||| | |||||||| ||    
T  8080453 caatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctattg 8080354  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    |||   |||||||||| |||||| |||||||||||||  ||||| |||||    
T  8080353 catggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatta 8080304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 32 - 169
Target Start/End: Complemental strand, 27744368 - 27744231
Alignment:
Q  32 ttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgta 131  Q
    |||| |||||||||||||| ||||| ||||||| ||||||| | || || |||||||||||| |  ||| ||||| | |||||||| |||||    ||||    
T  27744368 ttgatacccacacaaaaatctgacatgtggccacgtggatccctcataagcacattttctctatcctctcctcttctctcttcctagtgcatgggatgta 27744269  T
Q  132 caaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    ||||||| |||| ||||||| |||||| || |||||||    
T  27744268 caaggatatatgggaataaatggtgtttatataacatt 27744231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 38267068 - 38267172
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaa 118  Q
    ||||||||| || ||||||||||||||||||| |||||||| | || ||||| | | ||||| |||| |||||||||  ||| ||||| | |||||||||    
T  38267068 gacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaa 38267167  T
Q  119 tgcat 123  Q
    |||||    
T  38267168 tgcat 38267172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 21 - 169
Target Start/End: Original strand, 41915771 - 41915919
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| ||||||||||| |||||||||| ||||| |||||||| |||| | | |||||  ||| |||||||||  ||||||||| | ||||||||||     
T  41915771 caatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaata 41915870  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
     ||   |||||||||| ||||||  | |||| |||||  ||||||||||    
T  41915871 tatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 41915919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 36361983 - 36361909
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctcttt 95  Q
    |||||||||| ||||||||||||||||||| |||||||| | || ||||| | ||||||| |||| |||||||||    
T  36361983 caatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttctcttt 36361909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 40957748 - 40957886
Alignment:
Q  32 ttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgta 131  Q
    |||| |||||||||||||| |||||||| | || ||||||| |  |||| |||| |||||||||  |||  |||| | ||||||||||||||   |||||    
T  40957748 ttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacactttctcttttctctcatcttctctcttcctaatgcatggggtgta 40957847  T
Q  132 caaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    ||||| ||||||| ||||| ||||||  ||||| |||||    
T  40957848 caagggtgtatgaaaataatgggtgtctatgtatcatta 40957886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 36362057 - 36362130
Alignment:
Q  22 aatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctcttt 95  Q
    ||||||||| ||||||||||||||||||| |||||||| | || ||||| | ||||||| |||| |||||||||    
T  36362057 aatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttctcttt 36362130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 3694411 - 3694499
Alignment:
Q  35 acacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcat 123  Q
    |||||||||||||||| |||||||| | |||||||||| | ||||| |||| |||||||||  ||| ||||| | |||||| |||||||    
T  3694411 acacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcccaatgcat 3694499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 35468925 - 35468777
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    |||||||||  |||||||||||| |||||| | | | ||| ||||||||| |   |||||||||| |||||||||  | | ||||| | |||||||| |     
T  35468925 caatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaaacacactttctctttcctatcctcttctctcttcctagtt 35468826  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    ||| |  |||| ||||||||||||||||||| |||||  ||||||||||    
T  35468825 catgagatgtataaggatgtatgagaataaaaggtgtatatgtaacatt 35468777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 39255993 - 39255846
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| | ||||| ||||| |||||||| ||||||||||| | |||||   |||||||  ||| ||||||||| |||| ||||| | ||||||   ||    
T  39255993 caatacaccacttgatacccatacaaaaatctgacacgtggc-acgtggactccacacaagaacactttctctttcatctcctcttctctcttcccggtg 39255895  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
     ||| | ||||||||| ||||||| ||||||||||||  ||||||||||    
T  39255894 gatagaatgtacaagggtgtatgataataaagggtgtctatgtaacatt 39255846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 170
Target Start/End: Original strand, 38837261 - 38837396
Alignment:
Q  35 acacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgtacaa 134  Q
    ||||| |||||||||| |||||||| | || ||||| | | ||||| |||| |||||||||  ||| ||||| | ||||||||||||||    |||||||    
T  38837261 acacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatgggatgtacaa 38837360  T
Q  135 ggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    || ||||||  ||||||||||||  ||||| |||||    
T  38837361 gggtgtatggaaataaagggtgtctatgtatcatta 38837396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 175
Target Start/End: Original strand, 3434592 - 3434736
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||  |||||||| | || ||||||| | ||||| |||| ||||||||     |||||     |||||||||||    
T  3434592 caatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacactttctctt-----ttctc-----tcttcctaatg 3434681  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacattattcaa 175  Q
    |||   |||||||||| |||||| |||||||||||||  ||||| ||||| ||||    
T  3434682 catggggtgtacaaggctgtatgggaataaagggtgtctatgtatcattactcaa 3434736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 143
Target Start/End: Original strand, 8238243 - 8238365
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||| ||||| || | ||| |||| | | |||||  ||| |||||||||  ||||||||| | ||||||||||     
T  8238243 caatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaata 8238342  T
Q  121 cataaagtgtacaaggatgtatg 143  Q
    |||   |||||||||| ||||||    
T  8238343 catggggtgtacaagggtgtatg 8238365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 46033871 - 46033723
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || || ||||||||| |||||| |||||||||| ||  || |   | ||||| || |||||||||||  ||| ||||| | | |||||||||    
T  46033871 caatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagcatattttctcttttctctcctcttctctattcctaatg 46033772  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
     ||   |||||||||| |||||||||||||| |||||  ||||||||||    
T  46033771 tatggggtgtacaagggtgtatgagaataaatggtgtctatgtaacatt 46033723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 151
Target Start/End: Original strand, 31735940 - 31736037
Alignment:
Q  54 acacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgtacaaggatgtatgagaataaa 151  Q
    |||||||||||  |||||| | ||||| |||| |||||||||  ||| ||||| | ||||||||||| ||   |||||||||| |||||| |||||||    
T  31735940 acacgtggccacatggatcccgcacaagcacactttctcttttctctcctcttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaa 31736037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 36208204 - 36208305
Alignment:
Q  22 aatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgc 121  Q
    ||||||| | ||||||||||||||||||  ||||| |||| || ||||| |   ||||| ||||||||||||||  ||| ||||| | |||||||| |||    
T  36208204 aatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacattttctctttcctctcctcttctctcttcctagtgc 36208303  T
Q  122 at 123  Q
    ||    
T  36208304 at 36208305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 39 - 143
Target Start/End: Original strand, 26296692 - 26296796
Alignment:
Q  39 ccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgtacaaggat 138  Q
    ||||| |||||| ||| |||||||||| |||| | | ||||| | ||||||||||||  ||| ||||| | ||||| ||||| || | |||||||||| |    
T  26296692 ccacataaaaatctgatacgtggccatatggaccccgcacaagcgcattttctcttttctctcctcttctctcttcttaatgtatgaggtgtacaagggt 26296791  T
Q  139 gtatg 143  Q
    |||||    
T  26296792 gtatg 26296796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 36361906 - 36361846
Alignment:
Q  110 tcttcctaatgcataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    |||||||||| |||  | ||||||||| ||||||||||||||||||||  ||||| |||||    
T  36361906 tcttcctaatacatggaatgtacaagggtgtatgagaataaagggtgtctatgtatcatta 36361846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 2e-31; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 49607444 - 49607593
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||| |||||||| | || ||||||| ||||||| |||| |||||||||  ||| ||||||| |||||||||||    
T  49607444 caatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttctcttttctctcctcttttctcttcctaatg 49607543  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    ||| | |||||||||| |||||| |||||||||||||  ||||| |||||    
T  49607544 catgacgtgtacaagggtgtatgggaataaagggtgtctatgtatcatta 49607593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 14623909 - 14623761
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| ||||||||||||||| |||||| ||||| |||  |||||||| ||||||||| |||| ||||||||| |||||||||| | |||| ||| ||    
T  14623909 caatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttctctttcatcttctcttctctctttctagtg 14623810  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    ||| | ||||| ||||||||||||||||||| |||||  ||||||||||    
T  14623809 catgaggtgtagaaggatgtatgagaataaatggtgtctatgtaacatt 14623761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 21 - 175
Target Start/End: Original strand, 31456719 - 31456873
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||| |||||||| | |||||||| | | ||||| |||| |||||||||  ||| ||||||| |||||||||||    
T  31456719 caatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctcttttctctcctcttttctcttcctaatg 31456818  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacattattcaa 175  Q
    |||   |||||||||| || ||| |||||||||||||| ||||| ||||| ||||    
T  31456819 catggggtgtacaagggtgcatgggaataaagggtgtttatgtatcattactcaa 31456873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 32 - 169
Target Start/End: Original strand, 35536667 - 35536804
Alignment:
Q  32 ttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgta 131  Q
    |||||||||||| |||||| |||||||||| |||||||| || |||||| |||| || |||||| |||||||||| | |||||||| |||||   |||||    
T  35536667 ttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacacttcctctttcatcttctcttctctcttcctagtgcatggggtgta 35536766  T
Q  132 caaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
     |||| |||||||||||||| |||||  ||||||||||    
T  35536767 gaagggtgtatgagaataaatggtgtctatgtaacatt 35536804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 169
Target Start/End: Original strand, 8956792 - 8956940
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    |||||||||| |||||||||||| |||||| |||||||||  |||||||| || |||||| |||| || |||||| |||||||||| | |||||||| ||    
T  8956792 caatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcacacttcctctttcatcttctcttctctcttcctagtg 8956891  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    || |  ||||| |||| |||||||||||||| | |||  ||||||||||    
T  8956892 cacagggtgtagaagggtgtatgagaataaatgctgtctatgtaacatt 8956940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 25395401 - 25395253
Alignment:
Q  23 atacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgca 122  Q
    ||||||||||| | |||||||||||||| ||||| ||||| || | || | |||||||||||||||||||||| |||||||||||| |||| ||| | ||    
T  25395401 atacatcccttaatacccacacaaaaatctgacatgtggctatatagaccccacacaaacacattttctctttcatcttctcttttctctttctagtaca 25395302  T
Q  123 taaagtgtacaaggatgtatgagaataaagggtgttcatgtaacattatt 172  Q
    |   |||||||| |||||||||| ||||| | |||  |||||||||||||    
T  25395301 t-gggtgtacaaagatgtatgaggataaaagatgtctatgtaacattatt 25395253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 53982041 - 53982190
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||| |||||||| | || ||||| | | ||||| |||| |||||||||  ||| ||||| | |||||||||||    
T  53982041 caatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatg 53982140  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    |||   |||||||||| |||||| |||||||||||||  ||||| |||||    
T  53982141 catggggtgtacaaggttgtatgggaataaagggtgtctatgtatcatta 53982190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 69 - 169
Target Start/End: Original strand, 43746417 - 43746517
Alignment:
Q  69 gatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacat 168  Q
    ||||||||||||||||| ||||||||| |||| ||||| | |||||||| ||||| | |||||||||| ||||||| || |||||||||| |||||||||    
T  43746417 gatctcacacaaacacaatttctctttcatctcctcttctttcttcctagtgcatgaggtgtacaagggtgtatgacaacaaagggtgtttatgtaacat 43746516  T
Q  169 t 169  Q
    |    
T  43746517 t 43746517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 13898125 - 13898040
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctctt 106  Q
    ||||||| ||||||||||||||| |||||| |||||||||  |||||||| ||||||||| |||| ||||||||| ||||||||||    
T  13898125 caatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttctctttcatcttctctt 13898040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 33644230 - 33644379
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||| |||||||| | || ||||| | | ||||| |||| |||||||||  ||| ||||| | |||||||||||    
T  33644230 caatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatg 33644329  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    |||   ||||| |||| |||||| |||||||||||||  ||||| |||||    
T  33644330 catggggtgtataagggtgtatgggaataaagggtgtctatgtatcatta 33644379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 41189834 - 41189686
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    |||||||||  |||||||||||| |||||| |||||||||||||  |||| | | ||||| |||| |||||||||  ||| ||||| | |||||||||||    
T  41189834 caatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactttctcttttctctcctcttctttcttcctaatg 41189735  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
     ||  ||||||||||  ||||||  ||||||||||||  ||||||||||    
T  41189734 tatggagtgtacaagagtgtatggaaataaagggtgtctatgtaacatt 41189686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 22 - 169
Target Start/End: Complemental strand, 30801802 - 30801655
Alignment:
Q  22 aatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgc 121  Q
    |||||| || |||| |||||||||||||||||||| || | ||| |||| | ||||||| ||||||||||||||  |||  |||| | |||||||| | |    
T  30801802 aatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcacattttctctttcctctcatcttctctcttcctagtac 30801703  T
Q  122 ataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    ||   |||||||||| |||||||||||||| |||||  ||||||||||    
T  30801702 atggggtgtacaagggtgtatgagaataaaaggtgtctatgtaacatt 30801655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 169
Target Start/End: Complemental strand, 51419432 - 51419282
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaa 118  Q
    |||||||||||| || |||||||||||||||| |||||||||||||  | || | | ||||| |||| |||||||||  ||| || || | |||||||||    
T  51419432 gacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttctcttttctctcctattctctcttcctaa 51419333  T
Q  119 tgcataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    || ||   |||||||||| ||||||  |||||| |||||| ||||||||||    
T  51419332 tgtatggggtgtacaagggtgtatggaaataaaaggtgtttatgtaacatt 51419282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 1758518 - 1758424
Alignment:
Q  29 cccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcat 123  Q
    |||||||||||||||||||||| |||||  |||  | |||||   |||||||||||||||||||||| |||| ||||| | ||||||||||||||    
T  1758518 cccttgacacccacacaaaaatctgacatatggttacgtggactccacacaaacacattttctctttcatctcctcttctctcttcctaatgcat 1758424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 11347994 - 11347856
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaa 118  Q
    |||||||||||| |||||| |||||||||||| |||||||||||||  |||| |   || || |||| |||||||||  ||| ||||| | |||||||||    
T  11347994 gacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcacactttctcttttctctcctcttctctcttcctaa 11347895  T
Q  119 tgcataaagtgtacaaggatgtatgagaataaagggtgt 157  Q
    || ||   ||||| |||| |||||| |||||||||||||    
T  11347894 tgtatggggtgtataagggtgtatgggaataaagggtgt 11347856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 169
Target Start/End: Complemental strand, 20764971 - 20764837
Alignment:
Q  35 acacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgtacaa 134  Q
    |||||||||||||||| |||||||||||||  |||| | |  |||| |||| |||||||||  |||  |||| | ||||||||||| ||   ||||||||    
T  20764971 acacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacactttctcttttctctcatcttctctcttcctaatgtatggggtgtacaa 20764872  T
Q  135 ggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    || |||||||||||||| |||||  ||||||||||    
T  20764871 gggtgtatgagaataaatggtgtctatgtaacatt 20764837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 143
Target Start/End: Complemental strand, 36331391 - 36331277
Alignment:
Q  29 cccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagt 128  Q
    |||||||||||||||||||||| ||||| |||||||| |||| | | |||||  ||| |||||||||  ||||||||| | |||||||||| |||   ||    
T  36331391 cccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatggggt 36331292  T
Q  129 gtacaaggatgtatg 143  Q
    |||||||| ||||||    
T  36331291 gtacaagggtgtatg 36331277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 25407210 - 25407082
Alignment:
Q  29 cccttgacacccacacaaaaa-tatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaag 127  Q
    |||||||||| |||||||||| | |||||||||  ||| |||||| |||||||||||| ||||||||| |||| ||||| | |||  |||||| |||| |    
T  25407210 cccttgacacacacacaaaaaatctgacacgtgatcatatggatcccacacaaacacactttctctttcatctcctcttctctctcactaatgtataagg 25407111  T
Q  128 tgtacaaggatgtatgagaataaagggtg 156  Q
    |||| ||  || ||| |||||||||||||    
T  25407110 tgtataaatatatataagaataaagggtg 25407082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 170
Target Start/End: Original strand, 17470449 - 17470584
Alignment:
Q  35 acacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgtacaa 134  Q
    |||||||||||||||| |||||||| | || ||||| | ||||||| |||| |||||||||  |||  |||| | ||||||||||||||    |||||||    
T  17470449 acacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttctcttttctctcatcttctctcttcctaatgcatgggatgtacaa 17470548  T
Q  135 ggatgtatgagaataaagggtgttcatgtaacatta 170  Q
      ||||||||||||||| |||||  ||||| |||||    
T  17470549 atatgtatgagaataaatggtgtctatgtatcatta 17470584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 26141602 - 26141452
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctct--tttatcttcctaa 118  Q
    ||||||| || || |||||||||||||||| |||||||||| ||  |||| | ||||||| |||| |||||||||  ||| ||||  ||| |||||||||    
T  26141602 caatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactttctcttttctctcctcttctttctcttcctaa 26141503  T
Q  119 tgcataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    || ||   |||||||||  ||||||  ||||||||||||  ||||||||||    
T  26141502 tgtatggggtgtacaagagtgtatggaaataaagggtgtctatgtaacatt 26141452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 33118923 - 33118784
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttct-cttttatcttccta 117  Q
    ||||||||| || ||||||||||||||||||| |||||||| | || ||||||| | || ||||||| |||||||||  ||| || ||| | ||| ||||    
T  33118923 gacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacactttctctttcctctcctccttctctctcccta 33118824  T
Q  118 atgcataaagtgtacaaggatgtatgagaataaagggtgt 157  Q
     |||||   |||||||||| ||||||  ||||||||||||    
T  33118823 gtgcatggggtgtacaagggtgtatggaaataaagggtgt 33118784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 100 - 170
Target Start/End: Complemental strand, 11095358 - 11095288
Alignment:
Q  100 ttctcttttatcttcctaatgcataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    ||||||||| ||||||||||||||   |||||||||| ||||||||||||||||||||  ||||| |||||    
T  11095358 ttctcttttctcttcctaatgcatcgggtgtacaagggtgtatgagaataaagggtgtctatgtatcatta 11095288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 169
Target Start/End: Original strand, 47531913 - 47532043
Alignment:
Q  39 ccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgtacaaggat 138  Q
    |||||||| ||| |||||||||||||| || | | | ||||| |||| |||||||||  ||| || || | ||||||||||| ||  | ||||||||  |    
T  47531913 ccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttctcttttctctcctattctctcttcctaatgtatggaatgtacaagtgt 47532012  T
Q  139 gtatgagaataaagggtgttcatgtaacatt 169  Q
    ||||| |||||||||||||| ||||||||||    
T  47532013 gtatgggaataaagggtgtttatgtaacatt 47532043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 54868954 - 54868816
Alignment:
Q  32 ttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgta 131  Q
    ||||||||||||||||||| |||||||| |  | ||||| | | ||||| |||| |||||||||  |||  |||| | |||||||||||||||  |||||    
T  54868954 ttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttctcttttctctcatcttctctcttcctaatgcatagggtgta 54868855  T
Q  132 caaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    ||||| ||||||  |||||| |||||  ||||| |||||    
T  54868854 caagggtgtatggaaataaaaggtgtctatgtatcatta 54868816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 169
Target Start/End: Original strand, 8076434 - 8076571
Alignment:
Q  32 ttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgta 131  Q
    ||||||||||||||||||| | |||||| | || ||||| | | ||||| |||| |||||||||  ||| ||||| | |||||||| |||||   |||||    
T  8076434 ttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctttcctctcctcttctctcttcctagtgcatggggtgta 8076533  T
Q  132 caaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    |||   |||||||||||||| |||||  ||||||||||    
T  8076534 caaaagtgtatgagaataaatggtgtctatgtaacatt 8076571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 9563027 - 9563163
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaa 118  Q
    ||||||||| || |||||| ||| | |||||| |||||||| | || |||||||   |||||||||| ||||||| |  ||| ||||| | |||||||||    
T  9563027 gacaatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacacactttctctcttctctcctcttctctcttcctaa 9563126  T
Q  119 tgcataaagtgtacaaggatgtatgagaataaagggt 155  Q
    ||||| |  ||||||| | |||||| |||||||||||    
T  9563127 tgcatgagttgtacaaaggtgtatgggaataaagggt 9563163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 169
Target Start/End: Complemental strand, 35965843 - 35965704
Alignment:
Q  22 aatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgc 121  Q
    ||||||||| |||||||||||| |||||| ||||||||||        |||   ||||| |||| |||||||||  ||| ||||||| | ||| |||| |    
T  35965843 aatacatcctttgacacccacataaaaatctgacacgtgg--------atcctgcacaagcacactttctctttcctctcctcttttcttttcttaattc 35965752  T
Q  122 ataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    || | |||||||||| |||||||||||||| |||||  ||||||||||    
T  35965751 atgaggtgtacaagggtgtatgagaataaaaggtgtctatgtaacatt 35965704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 170
Target Start/End: Complemental strand, 36707496 - 36707349
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaa 118  Q
    ||||||||| || |||||| |||||||||||| |||||||| |  | ||||||| | | || ||    |||||||||  ||| ||||| | |||||||||    
T  36707496 gacaatacaccctttgacatccacacaaaaatctgacacgtagttacgtggatcccgcgcacac----tttctcttttctctcctcttctctcttcctaa 36707401  T
Q  119 tgcataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    ||||| | ||||||||| ||||||| ||||||| |||||  ||||| |||||    
T  36707400 tgcatgaggtgtacaagaatgtatgggaataaaaggtgtctatgtatcatta 36707349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 41080749 - 41080833
Alignment:
Q  32 ttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttccta 117  Q
    ||||||||||| ||||||| ||| | |||| |||||||| | ||||||| |||||||||||||| |||| ||||| | ||||||||    
T  41080749 ttgacacccacgcaaaaatctgatatgtggtcatgtggacc-cacacaagcacattttctctttcatctcctcttctctcttccta 41080833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 52629330 - 52629479
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||| |||||||| | || ||||| | |  |||| |||| |||||||||  |||  |||| | |||||||||||    
T  52629330 caatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttttctctcatcttctctcttcctaatg 52629429  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    |||    ||||||||| ||||||  ||||| ||||||  ||||| |||||    
T  52629430 catgggatgtacaagggtgtatggaaataatgggtgtctatgtatcatta 52629479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 27714960 - 27714888
Alignment:
Q  22 aatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctt 94  Q
    |||||| || ||||||||||||||||||| |||||||| | |||||||| | | ||||| |||| ||||||||    
T  27714960 aatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctctt 27714888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 169
Target Start/End: Complemental strand, 24700013 - 24699877
Alignment:
Q  32 ttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgta 131  Q
    |||||||||||| |||||| || |||||||||| ||||| |    ||||||||| |||||||||  ||| ||||| | |||||||| |  || | |||||    
T  24700013 ttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacactttctctttcctctcctcttctctcttcctagtttatgaggtgta 24699914  T
Q  132 caaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
     || |||||||||||||||| | |||  ||||||||||    
T  24699913 taa-gatgtatgagaataaaagatgtctatgtaacatt 24699877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 169
Target Start/End: Complemental strand, 45058615 - 45058475
Alignment:
Q  29 cccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagt 128  Q
    ||||||||||||||| |||||| ||||| ||| |||| |||| | | |||||  | | |||||||||  ||||||||| | |||||||||| |||   ||    
T  45058615 cccttgacacccacataaaaatctgacatgtgaccatatggaccccgcacaagtatactttctctttcttcttctcttctctcttcctaatacatggggt 45058516  T
Q  129 gtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    |||||| | ||||||  | |||| |||||  ||||||||||    
T  45058515 gtacaatggtgtatgcaattaaaaggtgtctatgtaacatt 45058475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 9e-31; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 21 - 169
Target Start/End: Original strand, 5957860 - 5958008
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||| |||||||| | || ||||||| | ||||| |||| |||||||||  ||| ||||| | |||||||| ||    
T  5957860 caatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacactttctctttcctctcctcttctctcttcctagtg 5957959  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    ||| | |||||||||| ||||||||||||||||||||| ||||||||||    
T  5957960 catgaggtgtacaagggtgtatgagaataaagggtgtttatgtaacatt 5958008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 170
Target Start/End: Complemental strand, 34012365 - 34012217
Alignment:
Q  22 aatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgc 121  Q
    |||||| || ||||||||||||||||||| |||||||| | || ||||||| | ||||| |||| |||||||||  ||| ||||| | ||||||||||||    
T  34012365 aatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcctaatgc 34012266  T
Q  122 ataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    ||   |||||||||| |||| |||||||||||||||  ||||| |||||    
T  34012265 atggggtgtacaagggtgtacgagaataaagggtgtctatgtatcatta 34012217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 170
Target Start/End: Original strand, 12831075 - 12831226
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaa 118  Q
    ||||||||| || ||||||||||||||||||| |||||||| | || ||||| | | ||||| |||| |||||||||  ||| ||||| | |||||||||    
T  12831075 gacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaa 12831174  T
Q  119 tgcataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    |||||   |||||||||| |||||||||||||| |||||  ||||| |||||    
T  12831175 tgcatggggtgtacaagggtgtatgagaataaatggtgtctatgtatcatta 12831226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 14547963 - 14548101
Alignment:
Q  32 ttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgta 131  Q
    ||||||||||||||||||| |||||||| | || ||||| | | ||||| |||| |||||||||  ||| ||||| | ||||||||||||||   |||||    
T  14547963 ttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgta 14548062  T
Q  132 caaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    |||||||||||| |||||||||||||  ||||| |||||    
T  14548063 caaggatgtatgggaataaagggtgtctatgtatcatta 14548101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 169
Target Start/End: Complemental strand, 16056473 - 16056323
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaa 118  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||| |||| | | |||||  ||| |||||||||  ||||||||| | |||||||||    
T  16056473 gacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaa 16056374  T
Q  119 tgcataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    | |||   |||||||||| ||||||  | |||| |||||  ||||||||||    
T  16056373 tacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 16056323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 45 - 169
Target Start/End: Complemental strand, 42354634 - 42354510
Alignment:
Q  45 aaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgtacaaggatgtatga 144  Q
    |||||| |||||||||  ||||||||||||||| || |||| ||||||||| |||||||||| | |||||||| |||||   ||||| |||| |||||||    
T  42354634 aaaaatctgacacgtgttcatgtggatctcacataagcacactttctctttcatcttctcttctctcttcctagtgcatggggtgtagaagggtgtatga 42354535  T
Q  145 gaataaagggtgttcatgtaacatt 169  Q
    ||||||| |||||  ||||||||||    
T  42354534 gaataaatggtgtctatgtaacatt 42354510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 153
Target Start/End: Complemental strand, 1180009 - 1179878
Alignment:
Q  22 aatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgc 121  Q
    |||||| || ||||||||||||||||||| |||||||| | |||||||||  | ||||| |||| |||||||||  ||| ||||| | ||||||||||||    
T  1180009 aatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttctcttttctctcctcttctctcttcctaatgc 1179910  T
Q  122 ataaagtgtacaaggatgtatgagaataaagg 153  Q
    ||   |||||||||||| |||| |||||||||    
T  1179909 atggggtgtacaaggatatatgggaataaagg 1179878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 15197363 - 15197493
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||| |||||||| | || ||||| | | ||||| |||| |||||||||  ||| ||||||| |||||| ||||    
T  15197363 caatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttttctcttccaaatg 15197462  T
Q  121 cataaagtgtacaaggatgtatgagaataaa 151  Q
    ||| | |||||||||| |||||| |||||||    
T  15197463 catgaggtgtacaagggtgtatgggaataaa 15197493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 24307863 - 24307714
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    |||||||||||||||||||||||||||||| ||| | |||||||| |||| | | |||||  ||| |||||||||  ||||||||| | ||||||||||     
T  24307863 caatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaata 24307764  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    |||   |||||||||| ||||||  | |||| |||||  |||||||||||    
T  24307763 catggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatta 24307714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 21 - 169
Target Start/End: Original strand, 37038509 - 37038657
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||| |||||||| | || ||||||| | ||||| |||| ||||| |||  ||| ||||| | |||||||| ||    
T  37038509 caatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctatttcctctcctcttctctcttcctagtg 37038608  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    |||   |||||||||| |||||   ||||||||||||| ||||||||||    
T  37038609 catggggtgtacaagggtgtatagaaataaagggtgtttatgtaacatt 37038657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 21 - 157
Target Start/End: Complemental strand, 40424013 - 40423877
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || |||||| |||||||||||| |||||||| | |||||||| | | ||||| |||| |||||||||  ||| ||||| | ||||||||||     
T  40424013 caatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaata 40423914  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgt 157  Q
    ||| | |||||||||| |||||| ||||||| |||||    
T  40423913 catgaggtgtacaagggtgtatgggaataaaaggtgt 40423877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 504180 - 504042
Alignment:
Q  32 ttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgta 131  Q
    ||||||||||||||||||| |||||||| | || ||||| | | ||||| ||||  ||||||||  |||  |||| | ||||||||||||||   |||||    
T  504180 ttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacattctcttttctctcatcttctctcttcctaatgcatggggtgta 504081  T
Q  132 caaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    ||||| ||||||||||||||||||||  ||||| |||||    
T  504080 caagggtgtatgagaataaagggtgtctatgtatcatta 504042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 23122656 - 23122518
Alignment:
Q  32 ttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgta 131  Q
    ||||||||||||||||||| |||||||| | || ||||| | | || || |||| |||||||||  ||| || || | ||||||||||||||   |||||    
T  23122656 ttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttctcttttctctcctgttctctcttcctaatgcatggggtgta 23122557  T
Q  132 caaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    ||||| ||||||||||||||||||||  ||||| |||||    
T  23122556 caagggtgtatgagaataaagggtgtctatgtatcatta 23122518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 32 - 169
Target Start/End: Complemental strand, 43414640 - 43414503
Alignment:
Q  32 ttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgta 131  Q
    ||||||||||||||||||| | |||||||| ||  |||||| | ||||| |||| |||||||||  ||| ||||| | ||||||||||| ||   |||||    
T  43414640 ttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactttctcttttctctcctcttctctcttcctaatgtatggggtgta 43414541  T
Q  132 caaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    ||||| ||||||  ||||||||||||  ||||||||||    
T  43414540 caagggtgtatggcaataaagggtgtctatgtaacatt 43414503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 35 - 174
Target Start/End: Original strand, 17443869 - 17444008
Alignment:
Q  35 acacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgtacaa 134  Q
    |||| ||||||||||| ||||| || | |||||||| | |||||||| ||| ||||||||| |||||||||| | |||||| | ||||| |  |||||||    
T  17443869 acactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagacactttctctttcatcttctcttctctcttcccagtgcatgagttgtacaa 17443968  T
Q  135 ggatgtatgagaataaagggtgttcatgtaacattattca 174  Q
    ||||||||    |||||||||||  |||||||||| ||||    
T  17443969 ggatgtattcttataaagggtgtctatgtaacatttttca 17444008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 21 - 176
Target Start/End: Complemental strand, 30479544 - 30479389
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || |||||| ||||| |||||| ||||| ||||| || |||| ||| |||||  ||| |||||||||  ||||||||| | ||||||||||     
T  30479544 caatacaccctttgacatccacataaaaatctgacatgtggctatatggacctcgcacaagtacactttctctttcttcttctcttctctcttcctaata 30479445  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacattattcaat 176  Q
    ||| | |||||||||| ||||||  | |||| |||||  |||||||||||| ||||    
T  30479444 catgaggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattatacaat 30479389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 119
Target Start/End: Original strand, 16383407 - 16383505
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaat 119  Q
    ||||||| |||||||||||||||||||||| ||||| |||||||| |||| | | |||||  ||| |||||||||  ||||||||| | ||||||||||    
T  16383407 caatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaat 16383505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 21 - 169
Target Start/End: Original strand, 32032755 - 32032902
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    |||||||||| |||||| |||||||||||| ||||| |||||||| ||||||   |||||  ||| |||||||||   |||||||| | ||||||||||     
T  32032755 caatacatcc-ttgacatccacacaaaaatctgacatgtggccatatggatcctgcacaagtacactttctctttctccttctcttctctcttcctaata 32032853  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    ||| | |||||||||| ||||||  | |||| |||||  ||||||||||    
T  32032854 catgaggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 32032902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 169
Target Start/End: Complemental strand, 10284703 - 10284553
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaa 118  Q
    |||||||||  | ||||||||||||||||||| |||||||| | || ||||| | | ||||| |||| |||||||||  | |  |||| | ||||||||     
T  10284703 gacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacactttctctttcctttcatcttctctcttcctag 10284604  T
Q  119 tgcataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    |||||   |||||||||| ||||| |||||||| |||||  ||||||||||    
T  10284603 tgcatggggtgtacaaggttgtataagaataaaaggtgtctatgtaacatt 10284553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 42221543 - 42221693
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaa 118  Q
    |||||||||| ||| ||||||||||||||||| ||||||||   ||| |||| | || |||| |||| ||||||||| ||||  |||| | |||||| ||    
T  42221543 gacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttctctttcatctcatcttctctcttccaaa 42221642  T
Q  119 tgcataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    |  |||  |||||||||| ||||||  |||||||| |||| || |||||||    
T  42221643 tatatagggtgtacaagggtgtatgtaaataaaggatgtttatataacatt 42221693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 169
Target Start/End: Complemental strand, 8841491 - 8841354
Alignment:
Q  32 ttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgta 131  Q
    ||||||||||||||||||| | |||||| | || ||||| | | ||||| |||| |||||||||  ||| ||||| | | |||||| |||||   |||||    
T  8841491 ttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctttcctctcctcttctcttttcctagtgcatggggtgta 8841392  T
Q  132 caaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    ||||  |||||||||||||| |||||  ||||||||||    
T  8841391 caagagtgtatgagaataaatggtgtctatgtaacatt 8841354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 152
Target Start/End: Original strand, 9122229 - 9122346
Alignment:
Q  35 acacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgtacaa 134  Q
    |||||||||||||||| ||||| || | || ||||||| | ||||| |||| |||||||||  ||| ||||| | ||||||||||||||   ||||||||    
T  9122229 acacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaa 9122328  T
Q  135 ggatgtatgagaataaag 152  Q
    |  |||||| ||||||||    
T  9122329 gagtgtatgggaataaag 9122346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 169
Target Start/End: Original strand, 34307246 - 34307394
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| |||||||||||||||||||||| ||||| |||| ||| || | | | |||||  ||| |||||||||  ||||||||| | ||||||||||     
T  34307246 caatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacactttctctttcttcttctcttctctcttcctaata 34307345  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
     ||   |||||||||| ||||||  | |||| |||||  ||||||||||    
T  34307346 tatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 34307394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 10621156 - 10621059
Alignment:
Q  22 aatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaat 119  Q
    |||||| || ||||||||||||||||||| |||||||| ||||  | |||| | ||||| |||| |||||||||  ||| ||||| | ||||||||||    
T  10621156 aatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctcttttctctcctcttctctcttcctaat 10621059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 44507143 - 44507027
Alignment:
Q  35 acacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgtacaa 134  Q
    |||||||||||||||| |||||||| | || ||||| | |  |||| || | |||||||||  |||  |||| | ||||||||||||||   ||||||||    
T  44507143 acacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatactttctcttttctctcatcttctctcttcctaatgcatggggtgtacaa 44507044  T
Q  135 ggatgtatgagaataaa 151  Q
    || ||||||||||||||    
T  44507043 gggtgtatgagaataaa 44507027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 157
Target Start/End: Complemental strand, 15048251 - 15048115
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctc-tttgatcttctcttttatcttcctaat 119  Q
    ||||||| || |||||||| |||||||||| |||||||| ||||  |||| | | ||||| |||| |||||| ||| |||| ||||| | ||||||||||    
T  15048251 caatacaccctttgacacc-acacaaaaatctgacacgtagccacatggaccccgcacaagcacactttctctttttatctcctcttctctcttcctaat 15048153  T
Q  120 gcataaagtgtacaaggatgtatgagaataaagggtgt 157  Q
    | ||    ||||||||| |||||  |||||||||||||    
T  15048152 gtatgggatgtacaagggtgtatcggaataaagggtgt 15048115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 24307659 - 24307708
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtgga 70  Q
    |||||||||| ||||||||||||||||||| ||| | |||||||| ||||    
T  24307659 caatacatccattgacacccacacaaaaatctgatatgtggccatatgga 24307708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 15258999 - 15258903
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttccta 117  Q
    |||||||||||| |||| ||||| |||||| ||||| |||| || ||||| |   ||||| ||||||||||||||  ||| ||||| | ||||||||    
T  15258999 caatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcacattttctctttcctctcctcttctctcttccta 15258903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 1e-29; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 177
Target Start/End: Original strand, 13438371 - 13438529
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaa 118  Q
    |||||||||||| ||||||||||||||||||| |||||||| | || ||||| | | ||||| |||| |||||||||  ||| ||||| | |||||||||    
T  13438371 gacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaa 13438470  T
Q  119 tgcataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacattattcaatt 177  Q
    |||||   ||||||||||||||||| |||||||||||||  ||||| ||||| ||||||    
T  13438471 tgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcattactcaatt 13438529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 21 - 175
Target Start/End: Original strand, 17473050 - 17473204
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||| |||||||| | || ||||||| | ||||| |||| |||||||||  ||| ||||| | |||||||||||    
T  17473050 caatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcctaatg 17473149  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacattattcaa 175  Q
    ||| | |||||||||| |||||| |||||||||||||  ||||| ||||| ||||    
T  17473150 catgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactcaa 17473204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 7465805 - 7465656
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||| |||||||| | || ||||| | ||||||| |||| ||||||||| ||||  |||| | |||||||||||    
T  7465805 caatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttctcttttatctcttcttctctcttcctaatg 7465706  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    ||| | |||||||||| |||||| |||||||||||||  ||||| |||||    
T  7465705 catgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcatta 7465656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 28863485 - 28863634
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||| |||||||| | || ||||| | | ||||| |||| ||||||||| |||| ||||| | |||||||||||    
T  28863485 caatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttatctcctcttctctcttcctaatg 28863584  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    ||| | |||||||||| |||||| |||||||||||||  ||||| |||||    
T  28863585 catgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcatta 28863634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 170
Target Start/End: Complemental strand, 10249454 - 10249303
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaa 118  Q
    ||||||||| |  ||||||||||||||||||| |||||||| | || ||||| | | ||||| |||| |||||||||  ||| ||||||| |||||||||    
T  10249454 gacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttttctcttcctaa 10249355  T
Q  119 tgcataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    |||||   |||||||||| ||||||||||||||||||||  ||||| |||||    
T  10249354 tgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatta 10249303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 134
Target Start/End: Complemental strand, 17820074 - 17819961
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| |||||||||||||||||||||| ||||| ||||  | ||||| | |||||||||||||||||||||| |||| ||||| | |||||||||||    
T  17820074 caatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacacattttctctttcatctcctcttctctcttcctaatg 17819975  T
Q  121 cataaagtgtacaa 134  Q
    ||| | ||||||||    
T  17819974 catgaggtgtacaa 17819961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 19930890 - 19930741
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || |||||| |||||||||||| |||||||| | |||||||| | | |||||||||| |||||||||  ||| ||||| | |||||||||||    
T  19930890 caatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctcttttctctcctcttctctcttcctaatg 19930791  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    ||| | |||||||||| |||||| ||||||| |||||  ||||| |||||    
T  19930790 catgaggtgtacaagggtgtatgggaataaaaggtgtctatgtatcatta 19930741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 38732382 - 38732532
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaa 118  Q
    |||||||||||||||||||||||||||||||| ||||| |||| ||| |||| | | |||||  ||| |||||||||  ||||||||| | |||||||||    
T  38732382 gacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaa 38732481  T
Q  119 tgcataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    | ||| |  ||||||||||||||||  | |||| |||||  ||||||||||    
T  38732482 tacatgagatgtacaaggatgtatgcaattaaaaggtgtctatgtaacatt 38732532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 21 - 143
Target Start/End: Complemental strand, 2997557 - 2997435
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| |||||||||||||||||||||| ||||| |||||||| |||| | | |||||  ||| |||||||||  ||||||||| | ||||||||||     
T  2997557 caatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaata 2997458  T
Q  121 cataaagtgtacaaggatgtatg 143  Q
    ||| | |||||||||| ||||||    
T  2997457 catgaggtgtacaagggtgtatg 2997435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 9058510 - 9058644
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||| |||||||| | |||||||| | | ||||| |||| |||||||||  ||| ||||| | |||||||||||    
T  9058510 caatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatg 9058609  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggt 155  Q
    |||   |||||||||  |||||| |||||||||||    
T  9058610 catggggtgtacaagagtgtatgggaataaagggt 9058644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 36168864 - 36169014
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaa 118  Q
    |||||||||||| || || ||||||||||||| |||||||||||||  |||| | | ||||| || | |||||||||  ||| || || | |||||||||    
T  36168864 gacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatactttctcttttctctcctattctctcttcctaa 36168963  T
Q  119 tgcataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    || ||   |||||||||  ||||||||||||||||||||| ||||||||||    
T  36168964 tgtatggggtgtacaagagtgtatgagaataaagggtgtttatgtaacatt 36169014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 43490149 - 43490299
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaa 118  Q
    ||||||||| |||||||||||||||||||||| ||||| |||||||| |||| | | |||||  ||| ||| |||||  ||||||||| | |||||||||    
T  43490149 gacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttatctttcttcttctcttctctcttcctaa 43490248  T
Q  119 tgcataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    | ||||  |||||||||| ||||||  | |||| |||||  ||||||||||    
T  43490249 tacatagggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 43490299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 21 - 157
Target Start/End: Complemental strand, 33436170 - 33436034
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||| | |||||| | || ||||| | | ||||| |||| |||||||||  |||  |||| | |||||||||||    
T  33436170 caatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctttcctctcatcttctctcttcctaatg 33436071  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgt 157  Q
    ||| | |||||||||| |||||||||||||| |||||    
T  33436070 catgaggtgtacaagggtgtatgagaataaaaggtgt 33436034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 40613972 - 40613824
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||| |||||||||||||  |||| | | ||||| |||| |||||||||  ||| || || | ||||| |||||    
T  40613972 caatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactttctcttttctctcctattctttcttcataatg 40613873  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
     ||   |||||||||| |||||| |||||||||||||  ||||||||||    
T  40613872 tatggggtgtacaagggtgtatgggaataaagggtgtctatgtaacatt 40613824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 32505720 - 32505564
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaa 118  Q
    ||||||||| |  ||||||||||||||||||| |||||||| | || ||||| | | ||||| |||| ||||| |||  ||| ||||| | ||||| |||    
T  32505720 gacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctattttctctcctcttctctcttcttaa 32505621  T
Q  119 tgcataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacattattcaa 175  Q
    |||||   |||||||||| ||||||||||||||| ||||  ||||| ||||| ||||    
T  32505620 tgcatggggtgtacaagggtgtatgagaataaagagtgtctatgtatcattactcaa 32505564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 173
Target Start/End: Complemental strand, 15428808 - 15428659
Alignment:
Q  23 atacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgca 122  Q
    ||||| ||||| |||| ||||||||||| ||||| ||||||||||  | | ||| |||||||||||||||||| |||| ||||||| |||| ||| | ||    
T  15428808 atacaccccttaacactcacacaaaaatctgacatgtggccatgtaaaccccacgcaaacacattttctctttcatctcctcttttctctttctagtaca 15428709  T
Q  123 taaagtgtacaaggatgtatgagaataaagggtgttcatgtaacattattc 173  Q
    |   |||||||||| ||||||||  |||| | |||  ||||||||||||||    
T  15428708 t-gggtgtacaagggtgtatgagggtaaatgatgtctatgtaacattattc 15428659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 119
Target Start/End: Complemental strand, 26891574 - 26891476
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaat 119  Q
    ||||||| |||| ||||||||||||||||| ||||| |||| || ||||| |||  |||| ||||||||||||||  ||||||||| | ||||||||||    
T  26891574 caatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcacattttctctttcctcttctcttctctcttcctaat 26891476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 119
Target Start/End: Complemental strand, 45097805 - 45097707
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaat 119  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||| |||| | | |||||  ||| |||||||||  ||||||||| | ||||||||||    
T  45097805 caatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaat 45097707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 21 - 169
Target Start/End: Original strand, 20700845 - 20700993
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||| || |||||||||| |||||||| | || ||||| | | || || |||| |||||||||  ||| ||||| | |||||||| ||    
T  20700845 caatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttctctttcctctcctcttctctcttcctagtg 20700944  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    |||   |||||||||| |||||| |||||||||||||  ||||||||||    
T  20700945 catggggtgtacaagggtgtatgggaataaagggtgtctatgtaacatt 20700993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 44152010 - 44152105
Alignment:
Q  74 cacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    ||||||| |||| ||||||||| |||| ||||| | |||||||||||||| |  | ||||||| |||||| ||||||| |||||| ||||||||||    
T  44152010 cacacaagcacactttctctttcatctcctcttctctcttcctaatgcatgagatatacaagggtgtatgcgaataaaaggtgtttatgtaacatt 44152105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 157
Target Start/End: Original strand, 2533154 - 2533289
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    |||||||||| |||||||| |||||||||| |||||||| ||||  | || | | ||||| |||| ||| ||||| |||| ||||| | |||||| ||||    
T  2533154 caatacatcctttgacacc-acacaaaaatctgacacgtagccacatagaccccgcacaagcacactttttcttttatctcctcttctctcttcccaatg 2533252  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgt 157  Q
     ||   |||||||||| |||||| |||||||||||||    
T  2533253 tatggggtgtacaagggtgtatgggaataaagggtgt 2533289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 5574491 - 5574415
Alignment:
Q  100 ttctcttttatcttcctaatgcataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacattattcaat 176  Q
    ||||||||| ||||||||||||||   |||||||||| |||||| |||||||||||||  ||||| ||||| |||||    
T  5574491 ttctcttttctcttcctaatgcatggcgtgtacaagggtgtatgggaataaagggtgtctatgtatcattactcaat 5574415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 13365391 - 13365531
Alignment:
Q  29 cccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagt 128  Q
    |||||||||||||||||||||| ||||| ||| |||| |||| | | |||||  ||| |||||||||  ||||||||| | |||||||||| |||   ||    
T  13365391 cccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatggggt 13365490  T
Q  129 gtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    |||||||| || |||  | |||| |||||  ||||||||||    
T  13365491 gtacaagggtgaatgcaattaaaaggtgtctatgtaacatt 13365531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 165
Target Start/End: Complemental strand, 38273212 - 38273069
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || || |||||||||||||||| |||||||| ||||  |||| | | ||| | |||| |||||||||  ||| || || | |||||||||||    
T  38273212 caatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcacactttctcttttctctcctattctctcttcctaatg 38273113  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaa 165  Q
     ||   |||||||| |||||||||||||||| |||||| ||||||    
T  38273112 tatggggtgtacaa-gatgtatgagaataaatggtgtttatgtaa 38273069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 157
Target Start/End: Original strand, 42257223 - 42257359
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    |||||||||  |||||||||||| |||||| |||||||||||||  |||| | | ||||| |||| |||||||||  ||| ||||| | |||||||||||    
T  42257223 caatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacactttctcttttctctcctcttctttcttcctaatg 42257322  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgt 157  Q
     ||   |||||||||  |||||   ||||||||||||    
T  42257323 tatggggtgtacaagagtgtatagaaataaagggtgt 42257359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 169
Target Start/End: Original strand, 3737986 - 3738121
Alignment:
Q  34 gacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgtaca 133  Q
    ||||||||||||||||| ||||| |||| |||||||| | | ||||| |||||||||| |||  ||| ||||| | ||||||||    |||  |||||||    
T  3737986 gacacccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcacattttctttttcctctcctcttctttcttcctagaatatagggtgtaca 3738085  T
Q  134 aggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    | | ||||||| |||| |||||||  ||||||||||    
T  3738086 aaggtgtatgaaaatatagggtgtctatgtaacatt 3738121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 41758678 - 41758765
Alignment:
Q  82 cacattttctctttgatcttctcttttatcttcctaatgcataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    |||||||||||||| |||| ||||| | ||||||||||  ||   |||||||||||||||||||||||||  ||||  ||||||||||    
T  41758678 cacattttctcttttatctcctcttctctcttcctaatatatggggtgtacaaggatgtatgagaataaaatgtgtctatgtaacatt 41758765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 157
Target Start/End: Complemental strand, 21301516 - 21301434
Alignment:
Q  75 acacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgtacaaggatgtatgagaataaagggtgt 157  Q
    ||||||||||| ||||||||| |||||||||| | |||||||| ||||| | ||||||| |  ||||||  ||||||||||||    
T  21301516 acacaaacacactttctcttttatcttctcttctttcttcctagtgcatgaggtgtacatgagtgtatggaaataaagggtgt 21301434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 40701519 - 40701657
Alignment:
Q  32 ttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgta 131  Q
    ||||||||||||||||||| |||||||| |  | ||||| | | ||||| |||| |||||||||  |||  |||| | ||||||||||||||   |||||    
T  40701519 ttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttctcttttctctcatcttctctcttcctaatgcatcgggtgta 40701618  T
Q  132 caaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    ||||| ||||||  |||||| |||||  ||||| |||||    
T  40701619 caagggtgtatggaaataaaaggtgtctatgtatcatta 40701657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 5574558 - 5574484
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctcttt 95  Q
    ||||||| || |||||||||||| |||||| |||||||| | || ||||||| | ||||| |||| |||||||||    
T  5574558 caatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 5574484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 41575168 - 41575270
Alignment:
Q  22 aatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctc-acacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    |||||| || ||||||  ||||||||||| ||||| |||| |||||||| | | |||||| |||| ||||||||| |||| ||||| | || ||||||||    
T  41575168 aatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttctctttcatctcctcttctctcgtcctaatg 41575267  T
Q  121 cat 123  Q
    |||    
T  41575268 cat 41575270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 18520954 - 18520805
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||| |||||||| | || ||||| | | ||||| |||| ||||||||| |||| ||||| | |||||||||||    
T  18520954 caatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttatctcctcttctctcttcctaatg 18520855  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    ||| | |||||||||| ||||||| ||||||||||||  ||||| |||||    
T  18520854 catgaggtgtacaagggtgtatgaaaataaagggtgtctatgtatcatta 18520805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 170
Target Start/End: Complemental strand, 33149707 - 33149559
Alignment:
Q  22 aatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgc 121  Q
    |||||| || ||||||||||||||||||| |||||||| | || ||||||| | ||||| |||| |||||||||  ||| ||||| | ||||||||||||    
T  33149707 aatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcctaatgc 33149608  T
Q  122 ataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    ||   |||||||||| |||| |||||||||||||||  ||||| |||||    
T  33149607 atggggtgtacaagggtgtacgagaataaagggtgtctatgtatcatta 33149559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 33825394 - 33825246
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    |||||||  |||||||||||||| |||||| |||||||||  |||||| | || |||||| |||| ||||||||| |||||||||| | |||||||| ||    
T  33825394 caatacactccttgacacccacataaaaatctgacacgtgttcatgtgaaccttacacaagcacactttctcttttatcttctcttctctcttcctagtg 33825295  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    |||   ||||| |||| |||||||||||||| |||||  ||||||||||    
T  33825294 catggggtgtagaaggctgtatgagaataaatggtgtcaatgtaacatt 33825246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 169
Target Start/End: Complemental strand, 15409682 - 15409532
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaa 118  Q
    |||||||||| | ||||||||||||||||||| |||||||| ||||  |||| | | ||||| |||| | |||||||  ||| ||||| | |||||||||    
T  15409682 gacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactctctcttttctctcctcttctctcttcctaa 15409583  T
Q  119 tgcataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    || ||   |||||||||| |||||| |||||||||||||| ||||||||||    
T  15409582 tgtatggggtgtacaagggtgtatgcgaataaagggtgtttatgtaacatt 15409532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 32 - 169
Target Start/End: Original strand, 6679739 - 6679876
Alignment:
Q  32 ttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgta 131  Q
    ||||||||||||||||||| |||||||||| ||  |||| | | ||||||||||||||||||||  ||| ||||| | ||||||||||| |||  |||||    
T  6679739 ttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacattttctcttttctctcctcttctctcttcctaatgtatagggtgta 6679838  T
Q  132 caaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    ||||| ||||||| |||||| | |||  ||||||||||    
T  6679839 caagggtgtatgacaataaatgatgtctatgtaacatt 6679876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 14831844 - 14831993
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || |||||||||||| |||||| |||||||| | || ||||||| | ||||| |||| ||||| |||  ||| ||||| | |||||||||||    
T  14831844 caatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttcttttttttctcctcttctctcttcctaatg 14831943  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    |||   ||||||||||||||||| |||||||||||||  ||||| |||||    
T  14831944 catggggtgtacaaggatgtatgggaataaagggtgtctatgtatcatta 14831993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 157
Target Start/End: Complemental strand, 36733012 - 36732876
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||| |||||| | | || ||||| | | ||||| |||| |||||||||  ||| ||||| | |||||||||||    
T  36733012 caatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatg 36732913  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgt 157  Q
    ||| | |||||||||| |||||| |||||||||||||    
T  36732912 catgaggtgtacaagggtgtatgggaataaagggtgt 36732876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 35 - 169
Target Start/End: Original strand, 31009032 - 31009166
Alignment:
Q  35 acacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgtacaa 134  Q
    |||||||||||||||| |||||||| | || ||||||| | ||||| |||| ||||| |||  ||||||||| | |||||||| |||||   ||||||||    
T  31009032 acacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctatttcctcttctcttctctcttcctagtgcatggggtgtacaa 31009131  T
Q  135 ggatgtatgagaataaagggtgttcatgtaacatt 169  Q
     | ||||||||||||||||||||  ||||||||||    
T  31009132 aggtgtatgagaataaagggtgtctatgtaacatt 31009166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 2740304 - 2740453
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||| |||||||| | || ||||||| | ||||| |||| |||||||||  ||| | ||| | |||||||||||    
T  2740304 caatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttttctctccccttctctcttcctaatg 2740403  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    |||    ||||||||| |||||| |||||||||||||  ||||| |||||    
T  2740404 catgggatgtacaagggtgtatgggaataaagggtgtctatgtatcatta 2740453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 174
Target Start/End: Complemental strand, 35943962 - 35943809
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    |||||||||  ||||||||||||||||||| |||||||| |  | ||||||| ||||||| |||| |||||||||  ||| ||||||| |||||||| ||    
T  35943962 caatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttctctttcctctcctcttttctcttcctagtg 35943863  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacattattca 174  Q
    |||   |||||||||| ||||||  ||||||  ||||  |||||||||| ||||    
T  35943862 catggggtgtacaagggtgtatggaaataaaatgtgtctatgtaacatttttca 35943809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 40145437 - 40145586
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || || ||| |||||||||||| |||||||| | || ||||| | | ||||| |||| |||||||||  ||| ||||| | |||||||||||    
T  40145437 caatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatg 40145536  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    ||  | |||||||||| | ||||||||||||||||||  ||||| |||||    
T  40145537 cacgaggtgtacaagggtatatgagaataaagggtgtctatgtatcatta 40145586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 2252238 - 2252090
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| |||||||||||||||||||||| ||||| |||||||| |||| | | |||||  ||| |||||||||  ||||||||| | ||||||||||     
T  2252238 caatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaata 2252139  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
     ||   |||||||||| ||||||  | |||| |||||  ||||||||||    
T  2252138 tatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 2252090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 3921335 - 3921187
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| |||||||||||||||||||||| ||||| |||||||| |||| | | |||||  ||| |||||||||  ||||||||| | ||||||||||     
T  3921335 caatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaata 3921236  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
     ||   |||||||||| ||||||  | |||| |||||  ||||||||||    
T  3921235 tatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 3921187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 157
Target Start/End: Original strand, 13811682 - 13811818
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    |||||||||  ||||||||||||||||||| |||||||| | || ||||| | | ||||| |||| ||||||||   ||| ||||| | |||||||||||    
T  13811682 caatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttctctctcctcttctctcttcctaatg 13811781  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgt 157  Q
    |||    |||||||||||||||| ||||||| |||||    
T  13811782 catgggatgtacaaggatgtatgggaataaatggtgt 13811818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 169
Target Start/End: Original strand, 21370048 - 21370182
Alignment:
Q  35 acacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgtacaa 134  Q
    |||||||| ||||||| ||||| |||| || ||||| | | ||||||||||||||||||||  |||  |||| | |||||||| |  ||||  |||||||    
T  21370048 acacccactcaaaaatctgacatgtggtcacgtggaccccgcacaaacacattttctctttcctctcatcttctttcttcctagtatataagatgtacaa 21370147  T
Q  135 ggatgtatgagaataaagggtgttcatgtaacatt 169  Q
     | ||||||| ||||||||||||| ||||||||||    
T  21370148 aggtgtatgaaaataaagggtgtttatgtaacatt 21370182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 26720546 - 26720676
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || || ||||| ||| |||||| |||||||||||||  |||||| | ||||| |||| |||||||||  ||||||||| | |||||||||||    
T  26720546 caatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttctcttttctcttctcttctctcttcctaatg 26720645  T
Q  121 cataaagtgtacaaggatgtatgagaataaa 151  Q
     ||   |||||| ||| ||||||||||||||    
T  26720646 tatggggtgtactagggtgtatgagaataaa 26720676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 26990295 - 26990425
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || || ||||| ||| |||||| |||||||||||||  |||||| | ||||| |||| |||||||||  ||||||||| | |||||||||||    
T  26990295 caatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttctcttttctcttctcttctctcttcctaatg 26990394  T
Q  121 cataaagtgtacaaggatgtatgagaataaa 151  Q
     ||   |||||| ||| ||||||||||||||    
T  26990395 tatggggtgtactagggtgtatgagaataaa 26990425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 119
Target Start/End: Original strand, 16327931 - 16328029
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaat 119  Q
    |||||||||| |||||||||||| |||||| |||||||||  |||||| | ||||||||| |||| ||| ||||| || ||||||| | ||| ||||||    
T  16327931 caatacatccattgacacccacataaaaatctgacacgtgttcatgtgcacctcacacaagcacactttttctttcattttctcttctctctccctaat 16328029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 35785240 - 35785378
Alignment:
Q  32 ttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgta 131  Q
    ||||||||||||||||||| |||||||| |  | ||||||| | ||||| |||| |||||||||  |||  |||| | ||||||||||||||   |||||    
T  35785240 ttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacactttctcttttctctcatcttctctcttcctaatgcatggggtgta 35785339  T
Q  132 caaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    ||||| ||||||  |||||| |||||  ||||| |||||    
T  35785340 caagggtgtatggaaataaaaggtgtctatgtatcatta 35785378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 22 - 151
Target Start/End: Complemental strand, 39557586 - 39557457
Alignment:
Q  22 aatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgc 121  Q
    |||||| | ||| ||| |||||||||||| |||||||||  ||  |||| | || |||| |||| ||||||||| |||| ||||| | |||||||||| |    
T  39557586 aatacacctcttaacatccacacaaaaatctgacacgtgatcacatggaccccatacaatcacactttctcttttatctcctcttctctcttcctaatac 39557487  T
Q  122 ataaagtgtacaaggatgtatgagaataaa 151  Q
    || | ||||||| |||| ||||||||||||    
T  39557486 atgaggtgtacatggatctatgagaataaa 39557457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 25831334 - 25831414
Alignment:
Q  40 cacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    |||| |||||| | |||||||| |||||||| | |||||||||||||||||||||| || | ||||||| |||| ||||||    
T  25831334 cacaaaaaaatctaacacgtggtcatgtggaccccacacaaacacattttctctttcatatcctcttttttctttctaatg 25831414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 28177805 - 28177904
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||| |||||||||| ||  |||| | | |||||||||| |||||||||  ||| |||||   |||||||||||    
T  28177805 caatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactttctcttttctctcctcttccctcttcctaatg 28177904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 151
Target Start/End: Original strand, 2177439 - 2177524
Alignment:
Q  66 gtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgtacaaggatgtatgagaataaa 151  Q
    ||||||| ||||||| ||||||||||||||  ||| ||||| | |||||||| |||||    ||||||||| ||||||||||||||    
T  2177439 gtggatcccacacaagcacattttctctttcctctcctcttctctcttcctagtgcattggatgtacaagggtgtatgagaataaa 2177524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 31132453 - 31132513
Alignment:
Q  110 tcttcctaatgcataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    |||| ||||||||| | |||||||||| ||||||| ||||||||||||| ||||| |||||    
T  31132453 tctttctaatgcatgaggtgtacaagggtgtatgaaaataaagggtgtttatgtatcatta 31132513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 39688967 - 39688819
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    |||||||||||||||||||||||||||||| ||| | |||| ||| || | | | || ||  ||| |||||||||  |||| |||| | ||||||||||     
T  39688967 caatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgcataagtacactttctctttcttcttttcttctctcttcctaata 39688868  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    ||||  |||||||| | ||||||  | |||| |||||  ||||||||||    
T  39688867 catagggtgtacaaaggtgtatgcaattaaaaggtgtctatgtaacatt 39688819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 42414372 - 42414298
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctcttt 95  Q
    ||||||| || ||||||||||||||||||| |||||||| | |||||||| | | ||||| |||| ||| |||||    
T  42414372 caatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttatcttt 42414298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 1e-23; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 50052498 - 50052350
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||| |||||||| | || ||||| | | ||||| |||| |||||||||  ||| ||||| | |||||||| ||    
T  50052498 caatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctctttcctctcctcttctctcttcctagtg 50052399  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    ||||| |||||||| | |||||| |||||||||||||  ||||||||||    
T  50052398 cataaggtgtacaaaggtgtatgggaataaagggtgtctatgtaacatt 50052350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 6034074 - 6034223
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||| ||||| || | || ||||||| | ||||| |||| |||||||||  ||| ||||| | |||||||||||    
T  6034074 caatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcctaatg 6034173  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    |||   |||||||||| |||||||||||||| |||||  ||||| |||||    
T  6034174 catggggtgtacaagggtgtatgagaataaaaggtgtctatgtatcatta 6034223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 48183119 - 48182970
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||| |||||||| | || ||||| | | ||||| |||| |||||||||  ||| ||||| | ||||| |||||    
T  48183119 caatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcttaatg 48183020  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    |||   |||||||||| ||||||||||||||||||||  ||||| |||||    
T  48183019 catggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatta 48182970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 170
Target Start/End: Original strand, 23608263 - 23608414
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaa 118  Q
    ||||||||| |  ||||||||||||||||||| |||||||| | || ||| |   ||||||| |||| ||||||||| |||| ||||| | |||||||||    
T  23608263 gacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacactttctcttttatctcctcttctctcttcctaa 23608362  T
Q  119 tgcataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    ||||| | ||||||| ||||||||| ||||||||| |||  ||||| |||||    
T  23608363 tgcatgaggtgtacagggatgtatgggaataaaggatgtctatgtatcatta 23608414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 170
Target Start/End: Complemental strand, 54473605 - 54473454
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaa 118  Q
    ||||||||| |  ||||||||||||||||||| | |||||| | || ||||| | | ||||| |||| ||| |||||  ||| ||||| | |||||||||    
T  54473605 gacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttatcttttctctcctcttctctcttcctaa 54473506  T
Q  119 tgcataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    | |||  ||||||||||| |||||| |||||||||||||||||||| |||||    
T  54473505 tacatggagtgtacaagggtgtatgggaataaagggtgttcatgtatcatta 54473454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 21 - 143
Target Start/End: Complemental strand, 17983813 - 17983691
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| |||||||||||||||||||||| ||||| |||||||| |||| | | |||||  ||| |||||||||  ||||||||| | ||||||||||     
T  17983813 caatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaata 17983714  T
Q  121 cataaagtgtacaaggatgtatg 143  Q
    ||| | |||||||||| ||||||    
T  17983713 catgaggtgtacaagggtgtatg 17983691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 35 - 173
Target Start/End: Complemental strand, 18769103 - 18768966
Alignment:
Q  35 acacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgtacaa 134  Q
    |||||||||||||||| ||||| |||| |||||  ||| |||||||||||||||||||||| ||||  | |||| |||||||||| |||   ||||||||    
T  18769103 acacccacacaaaaatctgacatgtggtcatgtaaatcccacacaaacacattttctctttcatctcattttttctcttcctaatacat-gggtgtacaa 18769005  T
Q  135 ggatgtatgagaataaagggtgttcatgtaacattattc 173  Q
    |||||||||||  |||| | |||| |||||||| |||||    
T  18769004 ggatgtatgagggtaaatgatgtttatgtaacactattc 18768966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 29548029 - 29547881
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    |||||||||||||||||||||||||||||| ||||| |||||||| |||||| | || ||  ||| ||| |||||  ||||||||| | ||||||||||     
T  29548029 caatacatcccttgacacccacacaaaaatctgacatgtggccatatggatcccgcataagtacactttttctttcttcttctcttctctcttcctaata 29547930  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    |||   |||||||||| ||||||  | |||| |||||  ||||||||||    
T  29547929 catggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 29547881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 135
Target Start/End: Complemental strand, 29589810 - 29589696
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| |||||||||||||||||||||| ||| | |||||||| |||| | |||||||  ||| |||||||||  ||||||||| | ||||||||||     
T  29589810 caatacaccccttgacacccacacaaaaatctgatatgtggccatatggaccccacacaagtacactttctctttcttcttctcttctctcttcctaata 29589711  T
Q  121 cataaagtgtacaag 135  Q
    ||| | |||||||||    
T  29589710 catgaggtgtacaag 29589696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 41236388 - 41236526
Alignment:
Q  32 ttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgta 131  Q
    |||||| |||||||||||| |||||||| | || ||||| | | ||||| |||| |||||||||  ||| ||||| | ||||||||||||||   |||||    
T  41236388 ttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgta 41236487  T
Q  132 caaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    ||||| |||||| |||||||||||||  ||||| |||||    
T  41236488 caagggtgtatgggaataaagggtgtctatgtatcatta 41236526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 24995177 - 24995028
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || |||||||||||| |||||| |||||||| | || ||||| | | ||||| ||||||||||||||  ||| ||||| | ||||| |||||    
T  24995177 caatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacattttctcttttctctcctcttctctcttcttaatg 24995078  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    |||   |||||||| | |||||| |||||||||||||  ||||| |||||    
T  24995077 catggggtgtacaatggtgtatgggaataaagggtgtctatgtatcatta 24995028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 19670786 - 19670638
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| |||||||||| ||||||||||| ||||| |||||||| |||| | | |||||  ||| |||||||||  ||||||||| | ||||||||||     
T  19670786 caatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaata 19670687  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    |||   |||||||||| ||||||  | |||| |||||  ||||||||||    
T  19670686 catggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 19670638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 50526241 - 50526093
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||| |||||||||| || ||||||  | ||||| |||  ||||| |||  ||| ||||| | |||||||| ||    
T  50526241 caatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcacgctttctatttcctctcctcttctctcttcctagtg 50526142  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    |||   |||||||||| |||||   ||||||||||||| ||||||||||    
T  50526141 catggggtgtacaagggtgtatagaaataaagggtgtttatgtaacatt 50526093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 21 - 108
Target Start/End: Original strand, 29977915 - 29978002
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctctttt 108  Q
    ||||||| ||||| |||||||||||||||| |||||||| | ||| |||| | ||||||| |||| ||||||||| ||||||||||||    
T  29977915 caatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactttctctttcatcttctctttt 29978002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 143
Target Start/End: Complemental strand, 11511532 - 11511410
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || |||||||||||| |||||| |||||||| | || ||||| | | ||||| |||| |||||||||  ||||||||| | ||||| |||||    
T  11511532 caatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctcttctcttctctcttcttaatg 11511433  T
Q  121 cataaagtgtacaaggatgtatg 143  Q
    ||| | |||||||||| ||||||    
T  11511432 catgaggtgtacaagggtgtatg 11511410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 169
Target Start/End: Complemental strand, 28480324 - 28480190
Alignment:
Q  35 acacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgtacaa 134  Q
    |||| ||||||||||| ||||| || | |||||||| | |||||||||||| |||||| || |||| ||||| | |||||||| ||||| |  |||||||    
T  28480324 acactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctccttcatctcctcttctctcttcctagtgcatgagttgtacaa 28480225  T
Q  135 ggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    ||||||||    |||||||||||  ||||||||||    
T  28480224 ggatgtattcttataaagggtgtctatgtaacatt 28480190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 169
Target Start/End: Complemental strand, 28481199 - 28481065
Alignment:
Q  35 acacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgtacaa 134  Q
    |||| ||||||||||| ||||| || | |||||||| | |||||||||||| |||||| || |||| ||||| | |||||||| ||||| |  |||||||    
T  28481199 acactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctccttcatctcctcttctctcttcctagtgcatgagttgtacaa 28481100  T
Q  135 ggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    ||||||||    |||||||||||  ||||||||||    
T  28481099 ggatgtattcttataaagggtgtctatgtaacatt 28481065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 169
Target Start/End: Complemental strand, 28482074 - 28481940
Alignment:
Q  35 acacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgtacaa 134  Q
    |||| ||||||||||| ||||| || | |||||||| | |||||||||||| |||||| || |||| ||||| | |||||||| ||||| |  |||||||    
T  28482074 acactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctccttcatctcctcttctctcttcctagtgcatgagttgtacaa 28481975  T
Q  135 ggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    ||||||||    |||||||||||  ||||||||||    
T  28481974 ggatgtattcttataaagggtgtctatgtaacatt 28481940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 169
Target Start/End: Original strand, 41823926 - 41824060
Alignment:
Q  35 acacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgtacaa 134  Q
    |||||||||||||||| |||||||| | ||  |||| | | ||||| |||| |||||||||  |||  |||| | |||||||||||||| | ||||||||    
T  41823926 acacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctcttttctctcttcttctctcttcctaatgcatgaggtgtacaa 41824025  T
Q  135 ggatgtatgagaataaagggtgttcatgtaacatt 169  Q
     | |||||||||||||| |||||  ||||||||||    
T  41824026 aggtgtatgagaataaatggtgtctatgtaacatt 41824060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 47104586 - 47104704
Alignment:
Q  33 tgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgtac 132  Q
    |||||||||||||||||| ||||||||||   | | || | |||||||||||| ||||||||| |||| ||||| | ||||| |||||||| | ||||||    
T  47104586 tgacacccacacaaaaatttgacacgtggttttattgaccccacacaaacacactttctctttcatctcctcttctctcttcttaatgcatgaggtgtac 47104685  T
Q  133 aaggatgtatgagaataaa 151  Q
     || ||||| |||||||||    
T  47104686 tagaatgtacgagaataaa 47104704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 32 - 169
Target Start/End: Original strand, 29239927 - 29240064
Alignment:
Q  32 ttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgta 131  Q
    |||||| |||||||||||| | |||||| | || ||||| | ||||||| |||| |||||||||  ||| ||||| | |||||||| |||||   |||||    
T  29239927 ttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacactttctctttcctctcctcttctctcttcctagtgcatggggtgta 29240026  T
Q  132 caaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    ||||  |||||| |||||||||||||  ||||||||||    
T  29240027 caagagtgtatgggaataaagggtgtctatgtaacatt 29240064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 42044437 - 42044288
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    |||||||||| |  |||||||||||||||| |||||||| | || ||||| | | ||||| |||| |||||||||  ||| ||||| | |||||||||||    
T  42044437 caatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatg 42044338  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    |||    ||||||||| ||||||  ||||||||||||  ||||| |||||    
T  42044337 catgggatgtacaagggtgtatggaaataaagggtgtctatgtatcatta 42044288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 169
Target Start/End: Complemental strand, 50813961 - 50813814
Alignment:
Q  22 aatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgc 121  Q
    |||||| |||||||||||||||||||||| ||||| |||| ||| || | | | |||||  ||| |||||||||  ||||||||| | |||||||||| |    
T  50813961 aatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatac 50813862  T
Q  122 ataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    || |  ||||||||| ||||||  | |||| |||||  ||||||||||    
T  50813861 atgagatgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 50813814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 143
Target Start/End: Original strand, 32766988 - 32767110
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| ||||||||||||| |||||||| ||||| |||||||| |||| |   |||||  ||| |||||||||  ||||||| | | |||| |||||     
T  32766988 caatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaagtacactttctctttcttcttctcctctctctttctaata 32767087  T
Q  121 cataaagtgtacaaggatgtatg 143  Q
    |||| ||||||||||| ||||||    
T  32767088 catagagtgtacaagggtgtatg 32767110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 119
Target Start/End: Original strand, 47986238 - 47986336
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaat 119  Q
    ||||||||||||||||| |||||||||||| ||||| |||||||| |||| | | |||||  ||| |||||||||  | ||||||| | ||||||||||    
T  47986238 caatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttattctcttctctcttcctaat 47986336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 480519 - 480382
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaa 118  Q
    ||||||||| || ||||||||||||||||||| |||||||| | || ||||| | |  |||| |||| |||||||||  ||| ||||| | |||||||||    
T  480519 gacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttttctctcctcttctctcttcctaa 480420  T
Q  119 tgcataaagtgtacaaggatgtatgagaataaagggtg 156  Q
    |||||   |||||||| | ||||||  ||||| |||||    
T  480419 tgcatggggtgtacaaaggtgtatggaaataatgggtg 480382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 29535405 - 29535485
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatct 100  Q
    ||||||||||| ||||  | ||||||||||||||| ||| |||||| ||||||| |||||||||||| ||||||||| ||||    
T  29535405 gacaatacatctcttggtatccacacaaaaatatg-cacatggccacgtggatcccacacaaacacactttctctttcatct 29535485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 169
Target Start/End: Original strand, 55475221 - 55475369
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||| ||||| |||||||| |||| |   || ||  ||| |||||||||  ||||||||| | ||||||||||     
T  55475221 caatacaccctttgacacccacacaaaaatctgacatgtggccatatggaccctgcataagtacactttctctttcttcttctcttctctcttcctaata 55475320  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    |||   |||||||||| ||||||  | |||| |||||  ||||||||||    
T  55475321 catggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 55475369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 157
Target Start/End: Original strand, 40574810 - 40574945
Alignment:
Q  22 aatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgc 121  Q
    |||||| || ||||||||||||||||||| |||||||  || |  |||||| |  |||| |||| |||||||||  ||| ||||| | ||||||||||      
T  40574810 aatacaccctttgacacccacacaaaaatctgacacgctgctacatggatcccgaacaagcacactttctcttttctctcctcttctctcttcctaatat 40574909  T
Q  122 ataaagtgtacaaggatgtatgagaataaagggtgt 157  Q
    ||   |||||||||| |||||||||||||| |||||    
T  40574910 atggggtgtacaagggtgtatgagaataaaaggtgt 40574945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 18769153 - 18769231
Alignment:
Q  35 acacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatctt 113  Q
    |||||||||||||||| |||||||||| |||||  | | |||||||| ||||||||||||| |||| || |||| ||||    
T  18769153 acacccacacaaaaatctgacacgtggtcatgtaaaccccacacaaatacattttctctttcatctccttttttctctt 18769231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 143
Target Start/End: Complemental strand, 44536808 - 44536694
Alignment:
Q  29 cccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagt 128  Q
    ||||||||| |||||||||||| ||||| |||| ||| | || | |||| ||  ||| |||||||||  ||||||||| | |||||||||| ||||  ||    
T  44536808 cccttgacatccacacaaaaatctgacatgtggtcatatagaccccacataagtacactttctctttcttcttctcttctctcttcctaatacatagggt 44536709  T
Q  129 gtacaaggatgtatg 143  Q
    ||||||| |||||||    
T  44536708 gtacaagaatgtatg 44536694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 23 - 152
Target Start/End: Complemental strand, 56300233 - 56300104
Alignment:
Q  23 atacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgca 122  Q
    |||||||  |||||| |||||||||||| ||||| |||| ||| || |||   |||||||||| |||||||||  ||| ||||| | |||| |||||| |    
T  56300233 atacatcatttgacatccacacaaaaatctgacatgtggtcatatgaatcctgcacaaacacactttctctttcctctcctcttctctctttctaatgta 56300134  T
Q  123 taaagtgtacaaggatgtatgagaataaag 152  Q
    | |  ||||||||  |||||||||||||||    
T  56300133 tgagatgtacaagattgtatgagaataaag 56300104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 119
Target Start/End: Complemental strand, 55079784 - 55079685
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtgga-tctcacacaaacacattttctctttgatcttctcttttatcttcctaat 119  Q
    ||||||| | ||||||||||| |||||||| ||||| |||||||| ||||  | |||||||  ||| |||||||||  ||||||||| | ||||||||||    
T  55079784 caatacacctcttgacacccatacaaaaatctgacatgtggccatatggacccccacacaagtacactttctctttcttcttctcttctctcttcctaat 55079685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 31910220 - 31910370
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaa 118  Q
    |||||||||  | ||||||||||||||||||| |||||| | ||||  |||| | | ||||| |||| |||||||||  |||  |||| | |||||||||    
T  31910220 gacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacactttctcttttctctcatcttctctcttcctaa 31910319  T
Q  119 tgcataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    || ||    ||||||||  |||||| ||||||| |||||  ||||||||||    
T  31910320 tgtatgggatgtacaagagtgtatgggaataaatggtgtctatgtaacatt 31910370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 8e-22; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 2581945 - 2582094
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||| |||||||| | || ||||| | | ||||| |||| ||||| |||  ||| ||||| | ||||||||||     
T  2581945 caatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttcttttttctctcctcttctctcttcctaata 2582044  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    ||| | |||||||||| ||||| ||||||||||||||| ||||| |||||    
T  2582045 catgaggtgtacaagggtgtattagaataaagggtgtttatgtatcatta 2582094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 19 - 168
Target Start/End: Original strand, 7740761 - 7740910
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaa 118  Q
    |||||||||||| |||||||| ||| |||||||||||||||||| ||||||| | |||||||| | ||||||| ||| |||| ||||| | |||||||      
T  7740761 gacaatacatccattgacacctacataaaaatatgacacgtggctatgtggaccccacacaaatatattttctttttcatctcctcttctctcttcctgt 7740860  T
Q  119 tgcataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacat 168  Q
    |||||    ||||||| |||||| ||||||||||||| | ||||| ||||    
T  7740861 tgcatgggatgtacaaagatgtacgagaataaagggtatccatgtgacat 7740910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 9474946 - 9474797
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||| |||||||| | || ||||| | | |||||||||| |||||||||  ||| ||||| | |||||||||||    
T  9474946 caatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacactttctcttttctctcctcttctctcttcctaatg 9474847  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    |||    ||||||||| ||||||||||||||| ||||  ||||| |||||    
T  9474846 catgggatgtacaagggtgtatgagaataaagagtgtctatgtatcatta 9474797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 41758835 - 41758984
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || |||||| |||||||||||| |||||||| | ||  |||| | | |||||||||| |||||||||  ||| ||||| | |||||||||||    
T  41758835 caatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacactttctcttttctctcctcttctctcttcctaatg 41758934  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    |||   |||||||||| ||||||||||||||||||||  ||||| |||||    
T  41758935 catggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatta 41758984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 157
Target Start/End: Original strand, 50630488 - 50630624
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    |||||||||| |||  |||||||||||||| |||||||| | || ||||| | | ||||| |||| |||||||||  ||| ||||| | |||||||||||    
T  50630488 caatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatg 50630587  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgt 157  Q
    ||||  |||||||||| |||||||||||||| |||||    
T  50630588 catagggtgtacaagggtgtatgagaataaatggtgt 50630624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 41608563 - 41608415
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| |||||||||| ||||||||||| ||||| |||||||| |||| | |  ||||  ||| |||||||||  ||||||||| | ||||||||||     
T  41608563 caatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacactttctctttcttcttctcttctctcttcctaata 41608464  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    ||||  |||||||||| ||||||  | |||| |||||| ||||||||||    
T  41608463 catagggtgtacaagggtgtatgcaattaaaaggtgtttatgtaacatt 41608415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 22 - 170
Target Start/End: Complemental strand, 47452389 - 47452241
Alignment:
Q  22 aatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgc 121  Q
    |||||| || ||||||||||||||||||| | |||||| | || ||||||| | ||||| |||| |||||||||  ||| ||||| | |||||||| |||    
T  47452389 aatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcctattgc 47452290  T
Q  122 ataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    ||   ||||||||||||||||| |||||||| ||||  ||||| |||||    
T  47452289 atggggtgtacaaggatgtatgggaataaagagtgtctatgtatcatta 47452241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 51898753 - 51898605
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || ||||||||||||||||||| |||||||| | || ||||||| | ||||| |||| ||||| |||  ||| ||||| | |||||||| ||    
T  51898753 caatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctatttcctctcctcttctctcttcctagtg 51898654  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    |||   |||||||||| |||||   ||||||||||||| ||||||||||    
T  51898653 catggggtgtacaagggtgtatagaaataaagggtgtttatgtaacatt 51898605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 32 - 151
Target Start/End: Complemental strand, 45044619 - 45044500
Alignment:
Q  32 ttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgta 131  Q
    |||||||||| |||||||| ||||| || ||||  |||| | | ||||||||||||||||||||  ||||||||| | ||||||||||| ||   |||||    
T  45044619 ttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacacattttctcttttctcttctcttctctcttcctaatgtatggggtgta 45044520  T
Q  132 caaggatgtatgagaataaa 151  Q
    ||||| ||||||||||||||    
T  45044519 caagggtgtatgagaataaa 45044500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 27564794 - 27564656
Alignment:
Q  32 ttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgta 131  Q
    ||||||||||||||||||| ||||||||   || ||||| | | ||||| |||| |||||||||  ||| ||||| | ||||||||||||||   |||||    
T  27564794 ttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgta 27564695  T
Q  132 caaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    ||||| |||||| |||||||||||||  ||||| |||||    
T  27564694 caagggtgtatgggaataaagggtgtctatgtatcatta 27564656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 37649239 - 37649377
Alignment:
Q  32 ttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgta 131  Q
    ||||||||||||||||||| |||||||||| || ||| ||  | ||||| |||| |||| ||||  ||| ||||| | ||||||||||||||   |||||    
T  37649239 ttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcacactttcccttttctctcctcttctctcttcctaatgcatggggtgta 37649338  T
Q  132 caaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    ||||| |||||| |||||||||||||  ||||| |||||    
T  37649339 caagggtgtatgggaataaagggtgtctatgtatcatta 37649377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 143
Target Start/End: Complemental strand, 50591070 - 50590948
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| |||||||||||||||||||||| ||||| |||||||| |||| | | |||||  ||| |||||||||  ||||||||| | ||||||||||     
T  50591070 caatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaata 50590971  T
Q  121 cataaagtgtacaaggatgtatg 143  Q
    |||   |||||||||| ||||||    
T  50590970 catggggtgtacaagggtgtatg 50590948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 175
Target Start/End: Complemental strand, 8346447 - 8346303
Alignment:
Q  32 ttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctctttta-tcttcctaatgcataaagtgt 130  Q
    ||||||||||||||||||| |||||||| | || ||||| |   ||||| |||| |||||||||  ||| |||||||  ||||||||||||||  |||||    
T  8346447 ttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacactttctcttttctctcctctttttctcttcctaatgcatggagtgt 8346348  T
Q  131 acaaggatgtatgagaataaagggtgttcatgtaacattattcaa 175  Q
    |||| | |||||||||||||| ||| || ||||| ||||| ||||    
T  8346347 acaaaggtgtatgagaataaatggtatttatgtatcattactcaa 8346303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 169
Target Start/End: Original strand, 32813277 - 32813425
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || || |||||||||||||||| |||||||||| ||  |||| | | ||||| |||| |||||||||  ||| ||||| | |||||||||||    
T  32813277 caatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatg 32813376  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
     ||   |||||||||| |||||| ||||||| |||||  ||||||||||    
T  32813377 tatggggtgtacaagggtgtatgggaataaatggtgtctatgtaacatt 32813425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 157
Target Start/End: Complemental strand, 37926508 - 37926372
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    |||||||||  || ||||||||| |||||| |||||||||||||  |||||| |  ||||  ||| |||||||||  ||||||||| | |||||||||||    
T  37926508 caatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacactttctcttttctcttctcttctctcttcctaatg 37926409  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgt 157  Q
     ||   ||||||||||||||||| ||||||| |||||    
T  37926408 tatggggtgtacaaggatgtatgtgaataaatggtgt 37926372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 169
Target Start/End: Complemental strand, 49811599 - 49811449
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaa 118  Q
    ||||||||| |  |||||| |||||||||||| |||||||| ||||| | ||   | ||||| |||| |||||||||  ||| ||||| | |||||||||    
T  49811599 gacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcacactttctcttttctctcctcttctctcttcctaa 49811500  T
Q  119 tgcataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    || ||   ||| |||||| ||||||||||||||||||||  ||||||||||    
T  49811499 tgtatgtggtgcacaagggtgtatgagaataaagggtgtctatgtaacatt 49811449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 43159 - 43296
Alignment:
Q  18 agacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttccta 117  Q
    ||||||||||||| ||||||||||||||||||| |||||||| | || |||||   | ||||| |||| |||||||||  ||| ||| | | |||| |||    
T  43159 agacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttctcttttctctcctcctctctctttcta 43258  T
Q  118 atgcataaagtgtacaaggatgtatgagaataaagggt 155  Q
    ||||||   |||||||||  ||||| ||||||||||||    
T  43259 atgcatggggtgtacaagagtgtataagaataaagggt 43296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 32 - 177
Target Start/End: Complemental strand, 48716341 - 48716196
Alignment:
Q  32 ttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgta 131  Q
    |||||| |||||||||||| |||||||| | || ||||| | | ||||| |||| ||| |||||  | | ||||| | ||||||||||||||   |||||    
T  48716341 ttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttatcttttctttcctcttctctcttcctaatgcatggggtgta 48716242  T
Q  132 caaggatgtatgagaataaagggtgttcatgtaacattattcaatt 177  Q
    ||||| |||||| |||||||||||||  ||||| ||||| ||||||    
T  48716241 caagggtgtatgggaataaagggtgtctatgtatcattactcaatt 48716196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 44332442 - 44332319
Alignment:
Q  20 acaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaat 119  Q
    |||||| ||| ||||||||||||| |||||| ||||| |||||| | |||| | | |||||  | | |||||||||  ||||||||| | ||||||||||    
T  44332442 acaatatatctcttgacacccacataaaaatctgacatgtggccctatggaccccgcacaagtatactttctctttcttcttctcttctctcttcctaat 44332343  T
Q  120 gcataaagtgtacaaggatgtatg 143  Q
     |||| ||||||||||| ||||||    
T  44332342 acatagagtgtacaagggtgtatg 44332319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 143
Target Start/End: Complemental strand, 5959070 - 5958948
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| | |||||||||||||||||||| ||||| |||| ||| |||| | | |||||  ||| |||||||||  ||||||||| | ||||||||||     
T  5959070 caatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaata 5958971  T
Q  121 cataaagtgtacaaggatgtatg 143  Q
    |||   |||||||||| ||||||    
T  5958970 catggggtgtacaagggtgtatg 5958948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 157
Target Start/End: Complemental strand, 38632373 - 38632255
Alignment:
Q  39 ccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgtacaaggat 138  Q
    |||||||||||| |||||||| | || ||||| | | ||||| |||| ||| |||||  ||| ||||| | ||||||||||||||   |||||||||| |    
T  38632373 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttttcttttctctcctcttctctcttcctaatgcatggggtgtacaagggt 38632274  T
Q  139 gtatgagaataaagggtgt 157  Q
    ||||| |||||||||||||    
T  38632273 gtatgggaataaagggtgt 38632255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 132
Target Start/End: Original strand, 13414789 - 13414902
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaa 118  Q
    ||||||||| || ||||||||||||||||||| | |||||| | || ||||| | ||||||| ||||||||||||||  | |  |||| | |||||||||    
T  13414789 gacaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacattttctcttttctatcatcttctctcttcctaa 13414888  T
Q  119 tgcataaagtgtac 132  Q
    |||||  |||||||    
T  13414889 tgcatggagtgtac 13414902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 178
Target Start/End: Original strand, 44454009 - 44454170
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||||| ||||| |||||||||||||| ||||| ||||  | ||||||| ||||||| |||| ||| |||||  |||  |||| | |||||||||||    
T  44454009 caatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacactttttctttcctctcatcttctctcttcctaatg 44454108  T
Q  121 cat----aaagtgtacaaggatgtatgagaataaagggtgttcatgtaacattattcaatta 178  Q
    |||      || ||| |||| ||||| |||||||| |||||| |||||||||| | ||||||    
T  44454109 catggggtcagagtataagggtgtataagaataaatggtgtttatgtaacattttccaatta 44454170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 26440762 - 26440838
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctcttt 95  Q
    ||||||||| || || |||||||||||||||| |||||||||||||  |||||| | || || |||| |||||||||    
T  26440762 gacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcacactttctcttt 26440838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 47748480 - 47748620
Alignment:
Q  29 cccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagt 128  Q
    ||||||||||||| | |||||| ||||| |||||||| |||||| | |||||  | | |||||||||  ||||||||| | |||||||||| |||   ||    
T  47748480 cccttgacacccatataaaaatctgacatgtggccatatggatcccgcacaagtatactttctctttcttcttctcttctctcttcctaatacatggggt 47748579  T
Q  129 gtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    |||||||  ||||||  | |||| |||||  ||||||||||    
T  47748580 gtacaagagtgtatgcaattaaaaggtgtctatgtaacatt 47748620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 151
Target Start/End: Complemental strand, 23597150 - 23597031
Alignment:
Q  32 ttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgta 131  Q
    |||| ||||||| |||||| ||||||||||||| || || ||  |||||||||| ||| |||||  ||| || || | | |||||| | ||| | ||||     
T  23597150 ttgatacccacataaaaatctgacacgtggccacgttgaccttgcacaaacacactttatcttttctctcctattctctattcctagttcatgaggtgtc 23597051  T
Q  132 caaggatgtatgagaataaa 151  Q
    ||||||||||||||||||||    
T  23597050 caaggatgtatgagaataaa 23597031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 169
Target Start/End: Complemental strand, 3302605 - 3302455
Alignment:
Q  19 gacaatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaa 118  Q
    ||||||| || ||| ||||||||||||||||| ||||||||   ||| |||| | || |||| |||| ||||| ||| ||||  |||| | |||||| ||    
T  3302605 gacaatatattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttctttttcatctcatcttctctcttccaaa 3302506  T
Q  119 tgcataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    |  |||  |||||||||| ||||||  |||||||| |||| || |||||||    
T  3302505 tatatagggtgtacaagggtgtatgttaataaaggatgtttatataacatt 3302455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 157
Target Start/End: Complemental strand, 11152448 - 11152312
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || | |||| |||||||||||| |||||||| | ||||| || | | ||||| |||  ||||| |||  ||| ||||| | |||||| | ||    
T  11152448 caatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcacgctttctttttcctctcctcttctctcttcccagtg 11152349  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgt 157  Q
    |||   ||||| ||||||||||||||||||| |||||    
T  11152348 catggggtgtagaaggatgtatgagaataaatggtgt 11152312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 169
Target Start/End: Original strand, 152528 - 152676
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| |||||||||||||||||||||| ||||| |||| ||| |||||| | |||||| ||| |||||||||  ||||||||| | |||| |||||     
T  152528 caatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctctttcttcttctcttctctctttctaata 152627  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    |||    ||||||||| ||||||  | |||| |||||  ||||||||||    
T  152628 catgggatgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 152676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 35 - 170
Target Start/End: Original strand, 4073 - 4208
Alignment:
Q  35 acacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatgcataaagtgtacaa 134  Q
    |||||||||||||||| |||||||| |  | ||||||| | || || |||| |||||||||  ||||||||| | ||||||||||||||   ||||||||    
T  4073 acacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttctcttttctcttctcttctctcttcctaatgcatggggtgtacaa 4172  T
Q  135 ggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    || |||||| ||||||| |||||  ||||| |||||    
T  4173 gggtgtatgggaataaatggtgtctatgtatcatta 4208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 10179 - 10030
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    |||||||||| |||||| ||||| |||||| |||||||| | || ||||| | |  |||| |||| |||||||||  ||| ||||| | |||||||||||    
T  10179 caatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcacactttctcttttctctcctcttctctcttcctaatg 10080  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatta 170  Q
    ||||  |||||||||| ||||||  ||||| ||||||  ||||| |||||    
T  10079 catagggtgtacaagggtgtatggaaataatgggtgtctatgtatcatta 10030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 999 - 851
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || || ||| |||||||||||  |||||||| | || ||| ||| | ||||| |||| |||||||||  ||| ||||| | |||||||| ||    
T  999 caatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttctctttcctctcctcttctctcttcctagtg 900  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    |||   |||||||||  |||||| |||||||||||||| ||||||||||    
T  899 catggggtgtacaagagtgtatgggaataaagggtgtttatgtaacatt 851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 999 - 851
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctcttttatcttcctaatg 120  Q
    ||||||| || || ||| |||||||||||  |||||||| | || ||| ||| | ||||| |||| |||||||||  ||| ||||| | |||||||| ||    
T  999 caatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttctctttcctctcctcttctctcttcctagtg 900  T
Q  121 cataaagtgtacaaggatgtatgagaataaagggtgttcatgtaacatt 169  Q
    |||   |||||||||  |||||| |||||||||||||| ||||||||||    
T  899 catggggtgtacaagagtgtatgggaataaagggtgtttatgtaacatt 851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 17084 - 17168
Alignment:
Q  21 caatacatcccttgacacccacacaaaaatatgacacgtggccatgtggatctcacacaaacacattttctctttgatcttctct 105  Q
    |||||||||||| |||| |||||||||||| ||||| |||| ||  |||| | | ||||| ||||||||||||||  ||||||||    
T  17084 caatacatccctcgacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctctttcctcttctct 17168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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