View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1836_low_88 (Length: 279)
Name: NF1836_low_88
Description: NF1836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1836_low_88 |
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Alignment Details
Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 36 - 261
Target Start/End: Original strand, 43817487 - 43817712
Alignment:
| Q |
36 |
atataaagaagtgtttatgagaatcaattttctactgtgcaataaagttttattgtttgaaaaggcaatactttgtaataatcgtttgagcataaggata |
135 |
Q |
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| T |
43817487 |
atataaagaagtgtttatgagaatcaattttctactgtgcaatcaaattttattgtttgaaaaggcaatactttgtaataatcgtttgagcataaggata |
43817586 |
T |
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| Q |
136 |
aactgataaaagtgtgtgttacttgaattttacttcaaataattaccctattgaattaaaatgtgcataaaatacttgaaagataatgtggcataagaag |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43817587 |
aactgataaaagtgtgtgttacttgaattttacttgaaataattaccctattgaattaaaatgtgcataaaatacttgaaagataatgtggcataagaag |
43817686 |
T |
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| Q |
236 |
tatcacttaagagttaagagtaggta |
261 |
Q |
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|||||||||||||||||||||||||| |
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| T |
43817687 |
tatcacttaagagttaagagtaggta |
43817712 |
T |
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