View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18374_high_2 (Length: 611)

Name: NF18374_high_2
Description: NF18374
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18374_high_2
NF18374_high_2
[»] chr3 (43 HSPs)
chr3 (15-596)||(23232637-23233218)
chr3 (482-586)||(21152678-21152782)
chr3 (1-43)||(13921412-13921454)
chr3 (1-42)||(8546332-8546373)
chr3 (1-42)||(18539891-18539932)
chr3 (1-46)||(19269867-19269912)
chr3 (1-46)||(25882657-25882702)
chr3 (1-50)||(28390060-28390109)
chr3 (1-46)||(29236131-29236176)
chr3 (1-43)||(1310965-1311007)
chr3 (1-43)||(5261024-5261066)
chr3 (1-43)||(8110426-8110468)
chr3 (1-43)||(13905044-13905086)
chr3 (1-43)||(27449175-27449217)
chr3 (1-43)||(43329769-43329811)
chr3 (1-43)||(46012734-46012776)
chr3 (1-43)||(48404947-48404989)
chr3 (1-42)||(4393357-4393398)
chr3 (1-46)||(26830444-26830489)
chr3 (3-43)||(11915847-11915887)
chr3 (1-40)||(18091556-18091595)
chr3 (1-40)||(29704041-29704080)
chr3 (2-40)||(1745497-1745535)
chr3 (1-43)||(5565809-5565851)
chr3 (1-43)||(9652665-9652707)
chr3 (1-43)||(10941671-10941713)
chr3 (1-43)||(11007689-11007731)
chr3 (1-43)||(11219225-11219267)
chr3 (1-43)||(18104536-18104578)
chr3 (1-43)||(19223536-19223578)
chr3 (1-43)||(20761956-20761998)
chr3 (1-39)||(21020152-21020190)
chr3 (1-43)||(21816808-21816850)
chr3 (50-100)||(23238538-23238588)
chr3 (1-43)||(26098900-26098942)
chr3 (1-43)||(26390640-26390682)
chr3 (1-43)||(31250175-31250217)
chr3 (1-43)||(36543836-36543878)
chr3 (1-43)||(36564445-36564487)
chr3 (3-39)||(5744505-5744541)
chr3 (3-39)||(5781464-5781500)
chr3 (2-46)||(8543556-8543600)
chr3 (1-33)||(28859678-28859710)
[»] chr7 (26 HSPs)
chr7 (442-596)||(28171539-28171694)
chr7 (1-46)||(48933227-48933272)
chr7 (1-43)||(23232130-23232172)
chr7 (1-43)||(27806109-27806151)
chr7 (1-46)||(31425514-31425559)
chr7 (1-43)||(3872193-3872235)
chr7 (1-43)||(3904484-3904526)
chr7 (1-51)||(14786633-14786683)
chr7 (1-43)||(18217920-18217962)
chr7 (1-43)||(21917340-21917382)
chr7 (1-43)||(22486485-22486527)
chr7 (1-43)||(23539323-23539365)
chr7 (4-43)||(9698544-9698583)
chr7 (1-43)||(1842985-1843027)
chr7 (1-39)||(1907446-1907484)
chr7 (1-43)||(6849217-6849259)
chr7 (1-43)||(7733318-7733360)
chr7 (4-46)||(7740675-7740717)
chr7 (1-43)||(11036598-11036640)
chr7 (1-39)||(20174111-20174149)
chr7 (1-43)||(23699831-23699873)
chr7 (1-43)||(23750742-23750784)
chr7 (1-43)||(28800969-28801011)
chr7 (1-43)||(37135291-37135333)
chr7 (1-43)||(42926425-42926467)
chr7 (2-39)||(30908955-30908992)
[»] chr2 (27 HSPs)
chr2 (468-589)||(36275776-36275898)
chr2 (1-43)||(27039914-27039956)
chr2 (1-43)||(32009040-32009082)
chr2 (2-43)||(12860235-12860276)
chr2 (1-53)||(43408507-43408559)
chr2 (1-40)||(18551262-18551301)
chr2 (1-43)||(12779687-12779729)
chr2 (1-43)||(20065080-20065122)
chr2 (1-43)||(28319585-28319627)
chr2 (1-43)||(37552314-37552356)
chr2 (1-43)||(41736259-41736301)
chr2 (1-43)||(44476381-44476423)
chr2 (1-42)||(1141623-1141664)
chr2 (1-42)||(15636742-15636783)
chr2 (1-42)||(32300538-32300579)
chr2 (1-40)||(2556182-2556221)
chr2 (1-52)||(14757118-14757169)
chr2 (1-39)||(7093655-7093693)
chr2 (1-43)||(13788061-13788103)
chr2 (1-43)||(21293717-21293759)
chr2 (1-43)||(22140370-22140412)
chr2 (1-43)||(32185919-32185961)
chr2 (1-43)||(36550922-36550964)
chr2 (1-43)||(38362277-38362319)
chr2 (2-43)||(23857964-23858005)
chr2 (1-41)||(13613101-13613141)
chr2 (3-43)||(41637707-41637747)
[»] chr8 (44 HSPs)
chr8 (448-540)||(5221530-5221622)
chr8 (1-43)||(17810387-17810429)
chr8 (1-46)||(3823222-3823267)
chr8 (1-52)||(23752283-23752334)
chr8 (1-43)||(4331067-4331109)
chr8 (1-43)||(8555310-8555352)
chr8 (1-43)||(9631493-9631535)
chr8 (1-43)||(19240956-19240998)
chr8 (1-43)||(19314140-19314182)
chr8 (1-43)||(19488067-19488109)
chr8 (1-43)||(24193202-24193244)
chr8 (1-43)||(24576030-24576072)
chr8 (1-43)||(25274686-25274728)
chr8 (1-43)||(25655864-25655906)
chr8 (1-43)||(27910770-27910812)
chr8 (1-43)||(27957189-27957231)
chr8 (2-43)||(6103761-6103802)
chr8 (2-43)||(11938834-11938875)
chr8 (2-43)||(30466960-30467001)
chr8 (1-42)||(33652656-33652697)
chr8 (1-41)||(15251690-15251730)
chr8 (3-43)||(17824622-17824662)
chr8 (3-39)||(37992190-37992226)
chr8 (1-52)||(19256301-19256352)
chr8 (1-43)||(4647761-4647803)
chr8 (1-43)||(6084252-6084294)
chr8 (1-43)||(6817143-6817185)
chr8 (1-43)||(8824914-8824956)
chr8 (1-43)||(9915047-9915089)
chr8 (1-39)||(13060941-13060979)
chr8 (1-43)||(16061945-16061987)
chr8 (1-43)||(17003351-17003393)
chr8 (1-43)||(22939402-22939444)
chr8 (1-43)||(25000437-25000479)
chr8 (1-43)||(27869327-27869369)
chr8 (1-43)||(29345160-29345202)
chr8 (1-43)||(32247998-32248040)
chr8 (1-43)||(40289427-40289469)
chr8 (1-43)||(42700663-42700705)
chr8 (1-43)||(43431565-43431607)
chr8 (3-52)||(10917918-10917967)
chr8 (1-42)||(14304318-14304359)
chr8 (1-42)||(18010067-18010108)
chr8 (1-45)||(35678063-35678107)
[»] chr5 (27 HSPs)
chr5 (1-53)||(17039627-17039679)
chr5 (1-43)||(8108866-8108908)
chr5 (1-51)||(24138839-24138889)
chr5 (1-46)||(618385-618430)
chr5 (1-46)||(35620347-35620392)
chr5 (1-43)||(12045818-12045860)
chr5 (1-43)||(16121845-16121887)
chr5 (1-43)||(23409072-23409114)
chr5 (1-43)||(28265481-28265523)
chr5 (1-43)||(36196485-36196527)
chr5 (1-43)||(38837677-38837719)
chr5 (1-42)||(746875-746916)
chr5 (1-52)||(7003727-7003778)
chr5 (1-40)||(23975726-23975765)
chr5 (1-43)||(2472720-2472762)
chr5 (1-43)||(4125194-4125236)
chr5 (1-43)||(5982737-5982779)
chr5 (1-43)||(7888888-7888930)
chr5 (1-43)||(8886857-8886899)
chr5 (1-43)||(12328232-12328274)
chr5 (1-43)||(16631880-16631922)
chr5 (1-34)||(10420267-10420300)
chr5 (1-42)||(15061064-15061105)
chr5 (10-51)||(19890984-19891025)
chr5 (1-46)||(20187944-20187989)
chr5 (1-46)||(25652586-25652631)
chr5 (1-33)||(25673245-25673277)
[»] scaffold0007 (3 HSPs)
scaffold0007 (1-52)||(3833-3884)
scaffold0007 (1-43)||(202865-202907)
scaffold0007 (1-43)||(274671-274713)
[»] chr1 (34 HSPs)
chr1 (1-52)||(46339442-46339493)
chr1 (1-43)||(20408166-20408208)
chr1 (1-43)||(25788003-25788045)
chr1 (1-46)||(46785961-46786006)
chr1 (1-43)||(8941000-8941042)
chr1 (1-43)||(9109981-9110023)
chr1 (1-43)||(12369957-12369999)
chr1 (1-43)||(12720900-12720942)
chr1 (1-43)||(19865335-19865377)
chr1 (1-43)||(28229461-28229503)
chr1 (1-39)||(30928388-30928426)
chr1 (1-43)||(46790091-46790133)
chr1 (1-43)||(48522609-48522651)
chr1 (1-46)||(4340498-4340543)
chr1 (2-46)||(25679973-25680017)
chr1 (1-52)||(41120734-41120785)
chr1 (1-43)||(6412059-6412101)
chr1 (1-43)||(6459308-6459350)
chr1 (1-43)||(7181561-7181603)
chr1 (1-43)||(9259189-9259231)
chr1 (1-43)||(12161905-12161947)
chr1 (1-39)||(18894910-18894948)
chr1 (1-43)||(23457988-23458030)
chr1 (1-43)||(27253861-27253903)
chr1 (1-43)||(29549509-29549551)
chr1 (1-43)||(41752524-41752566)
chr1 (1-43)||(45839383-45839425)
chr1 (1-43)||(50092304-50092346)
chr1 (1-43)||(51973515-51973557)
chr1 (3-56)||(14760960-14761013)
chr1 (1-46)||(17661141-17661186)
chr1 (1-42)||(18890556-18890597)
chr1 (2-43)||(20290327-20290368)
chr1 (3-43)||(50845336-50845376)
[»] chr4 (30 HSPs)
chr4 (1-43)||(30420039-30420081)
chr4 (1-52)||(13028813-13028864)
chr4 (1-43)||(4586764-4586806)
chr4 (1-43)||(7111952-7111994)
chr4 (1-43)||(19839268-19839310)
chr4 (1-43)||(22168357-22168399)
chr4 (1-43)||(27040031-27040073)
chr4 (1-43)||(37378629-37378671)
chr4 (1-43)||(54539375-54539417)
chr4 (1-43)||(55309218-55309260)
chr4 (1-42)||(8878972-8879013)
chr4 (1-42)||(18051928-18051969)
chr4 (1-46)||(25026646-25026691)
chr4 (1-46)||(45532582-45532627)
chr4 (1-40)||(9238634-9238673)
chr4 (4-43)||(13564921-13564960)
chr4 (1-52)||(30268985-30269036)
chr4 (1-52)||(30283153-30283204)
chr4 (1-52)||(46286226-46286277)
chr4 (1-43)||(4627084-4627126)
chr4 (1-43)||(5473938-5473980)
chr4 (1-43)||(9670485-9670527)
chr4 (1-43)||(9913347-9913389)
chr4 (1-43)||(16915458-16915500)
chr4 (1-43)||(32175743-32175785)
chr4 (1-43)||(38619936-38619978)
chr4 (1-43)||(38645839-38645881)
chr4 (1-43)||(44783572-44783614)
chr4 (1-43)||(45091350-45091392)
chr4 (1-33)||(34557272-34557304)
[»] chr6 (39 HSPs)
chr6 (1-46)||(22579352-22579397)
chr6 (1-52)||(24661006-24661057)
chr6 (1-43)||(5192195-5192237)
chr6 (1-43)||(5360500-5360542)
chr6 (1-51)||(6065528-6065578)
chr6 (1-43)||(6598555-6598597)
chr6 (1-43)||(6605502-6605544)
chr6 (1-43)||(9893054-9893096)
chr6 (1-43)||(12200785-12200827)
chr6 (1-43)||(15364464-15364506)
chr6 (1-43)||(15448476-15448518)
chr6 (1-39)||(18048879-18048917)
chr6 (1-43)||(26224519-26224561)
chr6 (1-43)||(28365002-28365044)
chr6 (1-43)||(30833966-30834008)
chr6 (1-42)||(14886652-14886693)
chr6 (1-50)||(25398093-25398142)
chr6 (10-54)||(33191180-33191224)
chr6 (1-52)||(6978368-6978419)
chr6 (1-52)||(15961404-15961455)
chr6 (1-44)||(20692816-20692859)
chr6 (1-43)||(495633-495675)
chr6 (1-43)||(1939248-1939290)
chr6 (1-43)||(9885334-9885376)
chr6 (1-43)||(10458855-10458897)
chr6 (1-43)||(12157382-12157424)
chr6 (1-43)||(16250808-16250850)
chr6 (1-43)||(18492460-18492502)
chr6 (1-43)||(20182236-20182278)
chr6 (1-43)||(21141030-21141072)
chr6 (1-43)||(22153713-22153755)
chr6 (1-43)||(27796840-27796882)
chr6 (1-42)||(9060181-9060222)
chr6 (3-52)||(11530318-11530367)
chr6 (2-43)||(13251385-13251426)
chr6 (1-42)||(15509247-15509288)
chr6 (2-43)||(21990181-21990222)
chr6 (1-54)||(28668191-28668244)
chr6 (3-39)||(12951801-12951837)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-52)||(6886-6937)
[»] scaffold0576 (1 HSPs)
scaffold0576 (1-43)||(9235-9277)
[»] scaffold0128 (1 HSPs)
scaffold0128 (1-43)||(10669-10711)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-46)||(173537-173581)
[»] scaffold0599 (1 HSPs)
scaffold0599 (3-43)||(7598-7638)
[»] scaffold0108 (1 HSPs)
scaffold0108 (1-41)||(12743-12783)
[»] scaffold0219 (1 HSPs)
scaffold0219 (1-52)||(19694-19745)
[»] scaffold0717 (1 HSPs)
scaffold0717 (1-43)||(924-966)
[»] scaffold0603 (1 HSPs)
scaffold0603 (1-43)||(5985-6027)
[»] scaffold0240 (1 HSPs)
scaffold0240 (1-43)||(14996-15038)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-43)||(7547-7589)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-43)||(26574-26616)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-43)||(39709-39751)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-43)||(22302-22344)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-43)||(17623-17665)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-43)||(182621-182663)
scaffold0009 (1-43)||(219727-219769)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-43)||(84680-84722)
[»] scaffold0001 (3 HSPs)
scaffold0001 (1-43)||(8116-8158)
scaffold0001 (1-43)||(21848-21890)
scaffold0001 (1-43)||(84394-84436)
[»] scaffold0655 (1 HSPs)
scaffold0655 (3-43)||(3168-3208)


Alignment Details
Target: chr3 (Bit Score: 475; Significance: 0; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 475; E-Value: 0
Query Start/End: Original strand, 15 - 596
Target Start/End: Complemental strand, 23233218 - 23232637
Alignment:
Q  15 aattttcctctctaattttgctttttctaataatgtatcacctacacactctttcgaagatttactacacgagcctttatcccaacgctaattattatct 114  Q
    ||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23233218 aatttccctccctaattttgctttttctaatagtgtatcacctacacactctttcgaagatttactacacgagcctttatcccaacgctaattattatct 23233119  T
Q  115 tcctaattgatttaccaattattttagtgatatttgtccttaatacatggtatttagccttttagttgtgtaacttttgcttttaaaagcttactgggag 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23233118 tcctaattgatttaccaattattttagtgatatttgtccttaatacatggtatttagccttttagttgtgtaacttttgctttaaaaagcttactgggag 23233019  T
Q  215 caaagaattggtgaaaaattaactttctctagttttgttctgcataggtcgcttgattagtctgctaagggatattgaaagagatttaaggaggccaggg 314  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  23233018 caaaggattggtgaaaaatcaactttctctagttttgttctgcataggtcgcttgattagtgtgctaagggatattgaaagagatttaaggaggcctggg 23232919  T
Q  315 tttgatcccttaaactaacataatcacaaactcaacgattatcaattgattataaaagatcacgcactaaactcgttgacaattcatcatagaaaaggaa 414  Q
    |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23232918 tttgatcccttaaattaacataatcataaactcaacgattaacaattgattataaaagatcacgcactaaactcgttgacaattcatcatagaaaaggaa 23232819  T
Q  415 aacctttcaaggtttaagnnnnnnnnngcggtaatgttggcattggtggttggttgttatggatgtagaaggtaggtcgtggttaggtggtgtgtatttt 514  Q
    |||||||||| |||||||         |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23232818 aacctttcaaagtttaagttttttttggcggtaatgttggcgttggtggttgtttgttatggatgtagaaggtaggtcgtggttaggtggtgtgtatttt 23232719  T
Q  515 ggcctcttttttggtgtttcttttggatatttcacttgtatacggcgtctctattttgtagtttctggatgaccggtctctg 596  Q
    |||||||||||| ||||||||||||| |||| ||||||||||||||| |||||||||||||||| || ||||||||||||||    
T  23232718 ggcctctttttttgtgtttcttttgggtattccacttgtatacggcgcctctattttgtagtttttgaatgaccggtctctg 23232637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 482 - 586
Target Start/End: Complemental strand, 21152782 - 21152678
Alignment:
Q  482 gaaggtaggtcgtggttaggtggtgtgtattttggcctcttttttggtgtttcttttggatatttcacttgtatacggcgtctctattttgtagtttctg 581  Q
    ||||||||||||||||||||| || ||||||||||| |||||||| |||||| |||||||| || | | | ||||||||| |||| |||| ||||||||     
T  21152782 gaaggtaggtcgtggttaggtagtatgtattttggcatctttttttgtgtttattttggatgttccgcctatatacggcgcctctgttttatagtttcta 21152683  T
Q  582 gatga 586  Q
    |||||    
T  21152682 gatga 21152678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 13921412 - 13921454
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  13921412 ttttttccgtcactaattttcctcgctaattttgctttttcta 13921454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8546332 - 8546373
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttct 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  8546332 ttttttccgtcactaattttcctcgctaattttgctttttct 8546373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 18539891 - 18539932
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttct 42  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  18539891 ttttttccgtcactaatttccctctctaattttgctttttct 18539932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 19269912 - 19269867
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaata 46  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||    
T  19269912 ttttttccgtcactaatttccctcgctaattttgctttttctaata 19269867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 25882657 - 25882702
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaata 46  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||    
T  25882657 ttttttccgtcactaatttccctcgctaattttgctttttctaata 25882702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 28390060 - 28390109
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaataatgt 50  Q
    ||||||||||||||||||||||||||| ||||| ||||||||| ||||||    
T  28390060 ttttttccgtcactaattttcctctctgattttactttttctagtaatgt 28390109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 29236131 - 29236176
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaata 46  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||    
T  29236131 ttttttccgtcactaatttccctcgctaattttgctttttctaata 29236176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1311007 - 1310965
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  1311007 ttttttccgtcactaattttccttgctaattttgctttttcta 1310965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5261024 - 5261066
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  5261024 ttttttccgtcactaatttccctcactaattttgctttttcta 5261066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8110426 - 8110468
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  8110426 ttttttccgtcactaatttccctcactaattttgctttttcta 8110468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13905086 - 13905044
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||||||||||  ||||||||||||||||||||||    
T  13905086 ttttttccgtcactaatttcgctctctaattttgctttttcta 13905044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 27449175 - 27449217
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  27449175 ttttttccgtcactaatttccctcgctaattttgctttttcta 27449217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43329811 - 43329769
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  43329811 ttttttccgtcactaatttccctcgctaattttgctttttcta 43329769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 46012776 - 46012734
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||||||||||||||| || |||||||||||||||    
T  46012776 ttttttccgtcactaattttcctccctgattttgctttttcta 46012734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 48404947 - 48404989
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  48404947 ttttttccgtcactaatttccctcgctaattttgctttttcta 48404989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4393398 - 4393357
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttct 42  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  4393398 ttttttccgtcactaatttccctcactaattttgctttttct 4393357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 26830489 - 26830444
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaata 46  Q
    |||||||||||| ||||||||||| |||||||| ||||||||||||    
T  26830489 ttttttccgtcattaattttcctccctaatttttctttttctaata 26830444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 11915847 - 11915887
Alignment:
Q  3 ttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  11915847 ttttccgtcactaatttccctcgctaattttgctttttcta 11915887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 18091595 - 18091556
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgcttttt 40  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  18091595 ttttttccgtcactaatttccctcgctaattttgcttttt 18091556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 29704080 - 29704041
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgcttttt 40  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  29704080 ttttttccgtcactaatttccctcgctaattttgcttttt 29704041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 1745535 - 1745497
Alignment:
Q  2 tttttccgtcactaattttcctctctaattttgcttttt 40  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  1745535 tttttccgtcactaatttccctcgctaattttgcttttt 1745497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5565809 - 5565851
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| || |||||||||||||||    
T  5565809 ttttttccgtcactaatttccctccctgattttgctttttcta 5565851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9652665 - 9652707
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| | ||||||||||||||||    
T  9652665 ttttttccgtcactaatttccctcgccaattttgctttttcta 9652707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 10941713 - 10941671
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||  ||||||||||||||||||    
T  10941713 ttttttccgtcactaatttcccttactaattttgctttttcta 10941671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 11007731 - 11007689
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||  ||||||||||||||||||    
T  11007731 ttttttccgtcactaatttcccttactaattttgctttttcta 11007689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 11219225 - 11219267
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||    
T  11219225 ttttttccgtcactaatttccctcgctaattttgttttttcta 11219267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 18104578 - 18104536
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||| |||||| |||| ||||||||||||||||||    
T  18104578 ttttttccgtcaataatttccctcgctaattttgctttttcta 18104536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19223536 - 19223578
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||    
T  19223536 ttttttccgtcaccaatttccctcgctaattttgctttttcta 19223578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 20761998 - 20761956
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| || |||||||||||||||    
T  20761998 ttttttccgtcactaatttccctccctgattttgctttttcta 20761956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 21020152 - 21020190
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttt 39  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  21020152 ttttttccgtcactaatttccctccctaattttgctttt 21020190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 21816808 - 21816850
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| |||||||| |||||||||    
T  21816808 ttttttccgtcactaatttccctcgctaatttttctttttcta 21816850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 23238588 - 23238538
Alignment:
Q  50 tatcacctacacactctttcgaagatttactacacgagcctttatcccaac 100  Q
    ||||| |||||| ||||| ||||||||||||||||||||||  ||||||||    
T  23238588 tatcatctacactctcttacgaagatttactacacgagcctccatcccaac 23238538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 26098900 - 26098942
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||| |||||||||| |||| ||||||||||||||||||    
T  26098900 ttttttccatcactaatttccctcgctaattttgctttttcta 26098942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 26390682 - 26390640
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||||||||||  ||| ||||||||||||||||||    
T  26390682 ttttttccgtcactaatttctctcgctaattttgctttttcta 26390640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 31250175 - 31250217
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||| |||||| |||||||||| |||||||    
T  31250175 ttttttccgtcactaatcttcctccctaattttgcattttcta 31250217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 36543836 - 36543878
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||| ||||||||||||||| |||||||| |||||||||    
T  36543836 ttttttccatcactaattttcctccctaatttttctttttcta 36543878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 36564487 - 36564445
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||| ||||||||||||||| |||||||| |||||||||    
T  36564487 ttttttccatcactaattttcctccctaatttttctttttcta 36564445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 5744505 - 5744541
Alignment:
Q  3 ttttccgtcactaattttcctctctaattttgctttt 39  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  5744505 ttttccgtcacaaattttcctccctaattttgctttt 5744541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 5781464 - 5781500
Alignment:
Q  3 ttttccgtcactaattttcctctctaattttgctttt 39  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  5781464 ttttccgtcacaaattttcctccctaattttgctttt 5781500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 8543556 - 8543600
Alignment:
Q  2 tttttccgtcactaattttcctctctaattttgctttttctaata 46  Q
    ||||||| |||||||||| |||| ||||||||| |||||||||||    
T  8543556 tttttccatcactaatttccctcgctaattttgttttttctaata 8543600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 28859678 - 28859710
Alignment:
Q  1 ttttttccgtcactaattttcctctctaatttt 33  Q
    |||||||||||||||||||||||| ||||||||    
T  28859678 ttttttccgtcactaattttcctcgctaatttt 28859710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 4e-18; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 442 - 596
Target Start/End: Original strand, 28171539 - 28171694
Alignment:
Q  442 gcggtaatgttggcattggtggttggttgttatggatgtagaaggtaggtcgtggttaggtggtgtgtattttggcctctttttt-ggtgtttcttttgg 540  Q
    ||||| |||||||  |||| ||||| ||||||||||||| ||||||||||||||| ||| |||||||| ||||||| |||||||| | | |||||||| |    
T  28171539 gcggtgatgttggtgttgggggttgcttgttatggatgttgaaggtaggtcgtgggtagttggtgtgtgttttggcgtcttttttcgttttttctttttg 28171638  T
Q  541 atatttcacttgtatacggcgtctctattttgtagtttctggatgaccggtctctg 596  Q
    || || | | | |||||| |  || | ||||||||||| |||| ||||||||||||    
T  28171639 atgttccgcatatatacgacacctatgttttgtagtttttggacgaccggtctctg 28171694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 48933227 - 48933272
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaata 46  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  48933227 ttttttccgtcactaattttcctcgctaattttgctttttctaata 48933272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 23232130 - 23232172
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  23232130 ttttttccgtcactaatttccctctctaattttgctttttcta 23232172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 27806109 - 27806151
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  27806109 ttttttccgtcactaattttcctcgctaattttgctttttcta 27806151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 31425559 - 31425514
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaata 46  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||    
T  31425559 ttttttccgtcactaatttccctcgctaattttgctttttctaata 31425514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 3872235 - 3872193
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  3872235 ttttttccgtcactaatttccctcgctaattttgctttttcta 3872193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 3904526 - 3904484
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  3904526 ttttttccgtcactaatttccctcgctaattttgctttttcta 3904484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 14786683 - 14786633
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaataatgta 51  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||||| ||||    
T  14786683 ttttttctgtcactaattttcctcactaattttgttttttctaatagtgta 14786633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 18217920 - 18217962
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  18217920 ttttttccgtcactaatttccctcgctaattttgctttttcta 18217962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 21917382 - 21917340
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  21917382 ttttttccgtcactaatttccctcactaattttgctttttcta 21917340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 22486485 - 22486527
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  22486485 ttttttccgtcactaatttccctcgctaattttgctttttcta 22486527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 23539323 - 23539365
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  23539323 ttttttccgtcactaatttccctcgctaattttgctttttcta 23539365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 9698583 - 9698544
Alignment:
Q  4 tttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  9698583 tttccgtcactaatttccctcgctaattttgctttttcta 9698544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 1842985 - 1843027
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| ||||  |||||||||||||||||    
T  1842985 ttttttccgtcactaatttccctcgttaattttgctttttcta 1843027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 1907446 - 1907484
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttt 39  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  1907446 ttttttccgtcactaatttccctcgctaattttgctttt 1907484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6849259 - 6849217
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||| |||||||||||||| |||| ||||||||||||||||||    
T  6849259 ttttctccgtcactaatttccctcgctaattttgctttttcta 6849217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 7733360 - 7733318
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||    
T  7733360 ttttttccgtcactaatttccctcgctaatttcgctttttcta 7733318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 7740717 - 7740675
Alignment:
Q  4 tttccgtcactaattttcctctctaattttgctttttctaata 46  Q
    ||||||||| |||||||||||| ||||||||||||| ||||||    
T  7740717 tttccgtcattaattttcctctttaattttgcttttcctaata 7740675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 11036598 - 11036640
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||  ||||||||||||||||||    
T  11036598 ttttttccgtcactaatttcccttgctaattttgctttttcta 11036640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 20174111 - 20174149
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttt 39  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  20174111 ttttttccgtcactaatttccctcgctaattttgctttt 20174149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 23699873 - 23699831
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| |||||||| |||||||||    
T  23699873 ttttttccgtcactaatttccctcgctaatttttctttttcta 23699831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 23750784 - 23750742
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||    
T  23750784 ttttttccgtcactaatttccctcgctaattttgttttttcta 23750742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 28800969 - 28801011
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||| ||||||||||| |||| ||||||||||||||||||    
T  28800969 ttttttctgtcactaatttccctcgctaattttgctttttcta 28801011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 37135333 - 37135291
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||    
T  37135333 ttttttccgtcactaatttccctcactaattttgttttttcta 37135291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 42926467 - 42926425
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||||||||||||||| ||||||||  ||||||||    
T  42926467 ttttttccgtcactaattttcctcgctaattttattttttcta 42926425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 30908992 - 30908955
Alignment:
Q  2 tttttccgtcactaattttcctctctaattttgctttt 39  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  30908992 ttttttcgtcactaatttttctctctaattttgctttt 30908955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 2e-17; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 468 - 589
Target Start/End: Complemental strand, 36275898 - 36275776
Alignment:
Q  468 ttgttatggatgtagaaggtaggtcgtggttaggtggtgtgtattttggcctc-ttttttggtgtttcttttggatatttcacttgtatacggcgtctct 566  Q
    ||||||||| ||| ||||||||||| |||||||||||||||| ||||||| || ||||||||| ||||||||| || || | | | |||||  || || |    
T  36275898 ttgttatgggtgttgaaggtaggtcttggttaggtggtgtgtgttttggcgtctttttttggtatttcttttgtatgttccgcctatatacaacgccttt 36275799  T
Q  567 attttgtagtttctggatgaccg 589  Q
     ||||||||||||||||||||||    
T  36275798 gttttgtagtttctggatgaccg 36275776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27039956 - 27039914
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  27039956 ttttttccgtcactaatttccctctctaattttgctttttcta 27039914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 32009040 - 32009082
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  32009040 ttttttccgtcactaattttcctcgctaattttgctttttcta 32009082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 12860276 - 12860235
Alignment:
Q  2 tttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  12860276 tttttccgtcactaattttcctccctaattttgctttttcta 12860235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 43408559 - 43408507
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaataatgtatc 53  Q
    ||||||||||||||||||| |||| |||||||||||||||||| || ||||||    
T  43408559 ttttttccgtcactaatttccctcactaattttgctttttctagtagtgtatc 43408507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 18551301 - 18551262
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgcttttt 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  18551301 ttttttccgtcactaattttcctcgctaattttgcttttt 18551262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 12779687 - 12779729
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  12779687 ttttttccgtcactaatttccctcgctaattttgctttttcta 12779729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 20065122 - 20065080
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  20065122 ttttttccgtcactaatttccctcgctaattttgctttttcta 20065080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 28319627 - 28319585
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  28319627 ttttttccgtcactaatttccctcactaattttgctttttcta 28319585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 37552314 - 37552356
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  37552314 ttttttccgtcactaatttccctcgctaattttgctttttcta 37552356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 41736259 - 41736301
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  41736259 ttttttccgtcactaatttccctcgctaattttgctttttcta 41736301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 44476423 - 44476381
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  44476423 ttttttccgtcactaatttccctcgctaattttgctttttcta 44476381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 1141623 - 1141664
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttct 42  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  1141623 ttttttccgtcactaatttccctcgctaattttgctttttct 1141664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15636783 - 15636742
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttct 42  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  15636783 ttttttccgtcactaatttccctcgctaattttgctttttct 15636742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 32300538 - 32300579
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttct 42  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  32300538 ttttttccgtcactaatttccctcgctaattttgctttttct 32300579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 2556182 - 2556221
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgcttttt 40  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  2556182 ttttttccatcactaattttcctctctaattttacttttt 2556221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 14757169 - 14757118
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaataatgtat 52  Q
    |||||||||||| |||||||| || |||||||||||||||||| || |||||    
T  14757169 ttttttccgtcattaattttcttcgctaattttgctttttctagtagtgtat 14757118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 7093655 - 7093693
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttt 39  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  7093655 ttttttccgtcactaatttccctcgctaattttgctttt 7093693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13788103 - 13788061
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||||| |||| |||| ||||||||||||||||||    
T  13788103 ttttttccgtcactgatttccctcgctaattttgctttttcta 13788061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 21293759 - 21293717
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||    
T  21293759 ttttttccgtcactaatttccctcgctaattttgttttttcta 21293717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22140412 - 22140370
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| ||||  |||||||||||||||||    
T  22140412 ttttttccgtcactaatttccctcgttaattttgctttttcta 22140370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 32185919 - 32185961
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||    
T  32185919 ttttttccgtcactaatttccctcgctaattttgttttttcta 32185961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 36550922 - 36550964
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||| |||||||||| |||||||||||||| ||||||||    
T  36550922 ttttttccatcactaatttccctctctaattttgttttttcta 36550964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 38362319 - 38362277
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||  ||||||||||||||||||    
T  38362319 ttttttccgtcactaatttcccttactaattttgctttttcta 38362277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 23858005 - 23857964
Alignment:
Q  2 tttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||| ||||||||||||| |||| ||||||||||||||||||    
T  23858005 ttttcccgtcactaatttccctcgctaattttgctttttcta 23857964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13613141 - 13613101
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttc 41  Q
    |||||| ||||||||||||||||| |||||||| |||||||    
T  13613141 tttttttcgtcactaattttcctcgctaatttttctttttc 13613101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 41637707 - 41637747
Alignment:
Q  3 ttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||| ||||| |||| ||||||||||||||||||    
T  41637707 ttttccgtcacaaatttccctccctaattttgctttttcta 41637747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 448 - 540
Target Start/End: Complemental strand, 5221622 - 5221530
Alignment:
Q  448 atgttggcattggtggttggttgttatggatgtagaaggtaggtcgtggttaggtggtgtgtattttggcctcttttttggtgtttcttttgg 540  Q
    |||||||| |||||||||| || || |||  || || ||| ||||||||||||||||||||| |||||   ||||||||||||||||||||||    
T  5221622 atgttggcgttggtggttgtttattttgggagttgatggttggtcgtggttaggtggtgtgtgttttgttgtcttttttggtgtttcttttgg 5221530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 17810387 - 17810429
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  17810387 ttttttccgtcactaattttcctcgctaattttgctttttcta 17810429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 3823222 - 3823267
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaata 46  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||    
T  3823222 ttttttccgtcactaatttccctcgctaattttgctttttctaata 3823267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 23752334 - 23752283
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaataatgtat 52  Q
    ||||||||||||||||| | |||| ||||||||||||||||||||| |||||    
T  23752334 ttttttccgtcactaatatccctcgctaattttgctttttctaatagtgtat 23752283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 4331067 - 4331109
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  4331067 ttttttccgtcactaatttccctcgctaattttgctttttcta 4331109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8555352 - 8555310
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  8555352 ttttttccgtcactaatttccctcgctaattttgctttttcta 8555310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9631493 - 9631535
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  9631493 ttttttccgtcactaattttccttgctaattttgctttttcta 9631535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19240956 - 19240998
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  19240956 ttttttccgtcactaatttccctcgctaattttgctttttcta 19240998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19314140 - 19314182
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  19314140 ttttttccgtcactaatttccctcgctaattttgctttttcta 19314182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 19488109 - 19488067
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  19488109 ttttttccgtcactaatttccctcgctaattttgctttttcta 19488067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 24193244 - 24193202
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  24193244 ttttttccgtcactaatttccctcgctaattttgctttttcta 24193202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 24576072 - 24576030
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  24576072 ttttttccgtcactaatttccctcgctaattttgctttttcta 24576030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 25274686 - 25274728
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  25274686 ttttttccgtcactaatttccctcgctaattttgctttttcta 25274728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 25655906 - 25655864
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  25655906 ttttttccgtcactaatttccctcactaattttgctttttcta 25655864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27910812 - 27910770
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  27910812 ttttttccgtcactaatttccctcgctaattttgctttttcta 27910770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27957231 - 27957189
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  27957231 ttttttccgtcactaatttccctcgctaattttgctttttcta 27957189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 6103802 - 6103761
Alignment:
Q  2 tttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||| |||| ||||||||||||||||||||||||||||||    
T  6103802 tttttctgtcattaattttcctctctaattttgctttttcta 6103761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 11938834 - 11938875
Alignment:
Q  2 tttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  11938834 tttttccgtcactaatttccctcgctaattttgctttttcta 11938875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 30467001 - 30466960
Alignment:
Q  2 tttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  30467001 tttttccgtcactaatttccctcgctaattttgctttttcta 30466960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 33652656 - 33652697
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttct 42  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  33652656 ttttttccgtcactaatttccctcgctaattttgctttttct 33652697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15251690 - 15251730
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttc 41  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  15251690 ttttttccgtcactaatttccctccctaattttgctttttc 15251730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 17824662 - 17824622
Alignment:
Q  3 ttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  17824662 ttttccgtcacaaatttccctctctaattttgctttttcta 17824622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 37992190 - 37992226
Alignment:
Q  3 ttttccgtcactaattttcctctctaattttgctttt 39  Q
    |||||||||||||||||||||| ||||||||||||||    
T  37992190 ttttccgtcactaattttcctccctaattttgctttt 37992226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 19256301 - 19256352
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaataatgtat 52  Q
    ||||||||||||||||||| ||||  ||||||||||||||||| || |||||    
T  19256301 ttttttccgtcactaatttccctcgttaattttgctttttctagtagtgtat 19256352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 4647803 - 4647761
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||    
T  4647803 ttttttccgtcactaatttccctcgctaattttgttttttcta 4647761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6084294 - 6084252
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||||||||||  ||| ||||||||||||||||||    
T  6084294 ttttttccgtcactaatttatctccctaattttgctttttcta 6084252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 6817143 - 6817185
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||||| ||||||||  ||||||||||||||||||    
T  6817143 ttttttccgtcactgattttccttgctaattttgctttttcta 6817185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8824914 - 8824956
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||| |||||||||| |||| ||||||||||||||||||    
T  8824914 ttttttccatcactaatttccctcgctaattttgctttttcta 8824956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 9915089 - 9915047
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||||||||||  ||| ||||||||||||||||||    
T  9915089 ttttttccgtcactaatttctctcgctaattttgctttttcta 9915047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 13060979 - 13060941
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttt 39  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  13060979 ttttttccgtcactaatttacctcgctaattttgctttt 13060941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 16061987 - 16061945
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| |||||||| |||||||||    
T  16061987 ttttttccgtcactaatttccctcgctaattttactttttcta 16061945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 17003351 - 17003393
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||  |||||||||||||| ||||||||||||||||||    
T  17003351 ttttttcccacactaattttcctccctaattttgctttttcta 17003393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 22939402 - 22939444
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| | || ||||||||||||||||||    
T  22939402 ttttttccgtcactaatttccttcactaattttgctttttcta 22939444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 25000479 - 25000437
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| |||||||| |||||||||    
T  25000479 ttttttccgtcactaatttccctcactaattttactttttcta 25000437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 27869327 - 27869369
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||| |||||||||| |||| ||||||||||||||||||    
T  27869327 ttttttccatcactaatttccctcgctaattttgctttttcta 27869369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 29345160 - 29345202
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| |||||||| |||||||||    
T  29345160 ttttttccgtcactaatttccctccctaatttttctttttcta 29345202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 32247998 - 32248040
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| ||||  |||||||||||||||||    
T  32247998 ttttttccgtcactaatttccctcgttaattttgctttttcta 32248040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 40289469 - 40289427
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||||||||||||||| ||||||||  ||||||||    
T  40289469 ttttttccgtcactaattttcctcgctaattttaatttttcta 40289427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 42700705 - 42700663
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||||| ||||||||| |||||||| |||||||||    
T  42700705 ttttttccgtcactgattttcctcgctaattttactttttcta 42700663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43431607 - 43431565
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| |||||||| |||||||||    
T  43431607 ttttttccgtcactaatttccctcactaatttttctttttcta 43431565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 10917918 - 10917967
Alignment:
Q  3 ttttccgtcactaattttcctctctaattttgctttttctaataatgtat 52  Q
    ||||||||||| ||||| |||| |||||||||||||||||| || |||||    
T  10917918 ttttccgtcacaaatttccctccctaattttgctttttctagtagtgtat 10917967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14304318 - 14304359
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttct 42  Q
    |||||||| |||||||||| |||| |||||||||||||||||    
T  14304318 ttttttccatcactaatttccctcgctaattttgctttttct 14304359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 18010108 - 18010067
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttct 42  Q
    |||||||||||||||||||  ||| |||||||||||||||||    
T  18010108 ttttttccgtcactaatttctctcgctaattttgctttttct 18010067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35678107 - 35678063
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaat 45  Q
    |||||||| ||| |||||||||||  |||||||||||||||||||    
T  35678107 ttttttccttcattaattttcctccttaattttgctttttctaat 35678063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 17039679 - 17039627
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaataatgtatc 53  Q
    |||||||||||||||||||||||| |||||||||||||||||| || ||||||    
T  17039679 ttttttccgtcactaattttcctcactaattttgctttttctagtagtgtatc 17039627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8108908 - 8108866
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  8108908 ttttttccgtcactaatttccctctctaattttgctttttcta 8108866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 24138889 - 24138839
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaataatgta 51  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||| ||||    
T  24138889 ttttttccgtcaccaattttcctcgctaattttgctttttctaatagtgta 24138839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 618385 - 618430
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaata 46  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||    
T  618385 ttttttccgtcactaatttccctcgctaattttgctttttctaata 618430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 35620392 - 35620347
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaata 46  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||    
T  35620392 ttttttccgtcactaatttccctcgctaattttgctttttctaata 35620347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 12045818 - 12045860
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  12045818 ttttttccgtcactaatttccctcgctaattttgctttttcta 12045860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 16121887 - 16121845
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  16121887 ttttttccgtcactaatttccctcgctaattttgctttttcta 16121845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 23409072 - 23409114
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||||||||||| ||| ||||||||||||||||||    
T  23409072 ttttttccgtcactaatttttctcgctaattttgctttttcta 23409114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 28265523 - 28265481
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||||||||||||||| |||||||| |||||||||    
T  28265523 ttttttccgtcactaattttcctcgctaattttactttttcta 28265481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 36196485 - 36196527
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  36196485 ttttttccgtcactaatttccctcgctaattttgctttttcta 36196527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 38837719 - 38837677
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  38837719 ttttttccgtcactaatttccctcgctaattttgctttttcta 38837677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 746916 - 746875
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttct 42  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  746916 ttttttccgtcactaatttccctcgctaattttgctttttct 746875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 7003778 - 7003727
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaataatgtat 52  Q
    ||||||||||||||||||| |||| ||||||||| |||||||| || |||||    
T  7003778 ttttttccgtcactaatttccctcgctaattttgttttttctagtagtgtat 7003727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 23975726 - 23975765
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgcttttt 40  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  23975726 ttttttccgtcactaatttccctcgctaattttgcttttt 23975765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 2472762 - 2472720
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| | || ||||||||||||||||||    
T  2472762 ttttttccgtcactaatttccttcactaattttgctttttcta 2472720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 4125236 - 4125194
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| |||||||| |||||||||    
T  4125236 ttttttccgtcactaatttccctcgctaattttactttttcta 4125194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5982737 - 5982779
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| || |||||||||||||||    
T  5982737 ttttttccgtcactaatttccctcgctgattttgctttttcta 5982779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 7888888 - 7888930
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||| |||||| |||| ||||||||||||||||||    
T  7888888 ttttttccgtcaataatttccctcgctaattttgctttttcta 7888930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8886899 - 8886857
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||| |||||| |||||||||| ||||||||||||||||||    
T  8886899 tttttttcgtcacaaattttcctcgctaattttgctttttcta 8886857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12328274 - 12328232
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||| |||||||| |||| ||||||||||||||||||    
T  12328274 ttttttccgttactaatttccctcactaattttgctttttcta 12328232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 16631922 - 16631880
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| |||||||| |||||||||    
T  16631922 ttttttccgtcactaatttccctcgctaatttttctttttcta 16631880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 10420300 - 10420267
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttg 34  Q
    ||||||||||||||||||| ||||||||||||||    
T  10420300 ttttttccgtcactaatttccctctctaattttg 10420267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 15061064 - 15061105
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttct 42  Q
    ||||||| ||||||||||| |||| |||||||||||||||||    
T  15061064 ttttttcggtcactaatttccctcgctaattttgctttttct 15061105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 19891025 - 19890984
Alignment:
Q  10 tcactaattttcctctctaattttgctttttctaataatgta 51  Q
    |||||||||| |||| ||||||||||||||||||||| ||||    
T  19891025 tcactaatttccctcgctaattttgctttttctaatagtgta 19890984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20187989 - 20187944
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaata 46  Q
    ||||||||||||||||||| | || |||||||||||||| ||||||    
T  20187989 ttttttccgtcactaatttccttcgctaattttgcttttgctaata 20187944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 25652631 - 25652586
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaata 46  Q
    ||||||| |||||| |||| |||| |||||||||||||||||||||    
T  25652631 ttttttctgtcactgatttccctcgctaattttgctttttctaata 25652586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 25673277 - 25673245
Alignment:
Q  1 ttttttccgtcactaattttcctctctaatttt 33  Q
    |||||||||||||||||||||||| ||||||||    
T  25673277 ttttttccgtcactaattttcctccctaatttt 25673245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 3833 - 3884
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaataatgtat 52  Q
    |||||||||||||||||||||||| |||||||||||||||||| || |||||    
T  3833 ttttttccgtcactaattttcctcgctaattttgctttttctagtagtgtat 3884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 202865 - 202907
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| |||||||| |||||||||    
T  202865 ttttttccgtcactaatttccctcgctaatttttctttttcta 202907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 274713 - 274671
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||    
T  274713 ttttttccgtcactaatttccctcgctaattttgttttttcta 274671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 46339493 - 46339442
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaataatgtat 52  Q
    |||||||||||||||||||||||| |||||||||||||||||| || |||||    
T  46339493 ttttttccgtcactaattttcctcgctaattttgctttttctagtagtgtat 46339442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 20408208 - 20408166
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  20408208 ttttttccgtcactaattttcctcgctaattttgctttttcta 20408166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 25788045 - 25788003
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  25788045 ttttttccgtcactaattttcctcgctaattttgctttttcta 25788003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 46786006 - 46785961
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaata 46  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||    
T  46786006 ttttttccgtcactaatttccctcgctaattttgctttttctaata 46785961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8941042 - 8941000
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  8941042 ttttttccgtcactaatttccctcgctaattttgctttttcta 8941000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 9110023 - 9109981
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  9110023 ttttttccgtcactaatttccctcgctaattttgctttttcta 9109981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12369999 - 12369957
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  12369999 ttttttccgtcactaatttccctcgctaattttgctttttcta 12369957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 12720900 - 12720942
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  12720900 ttttttccgtcactaatttccctcgctaattttgctttttcta 12720942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19865335 - 19865377
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||||||||||||||| |||||||| |||||||||    
T  19865335 ttttttccgtcactaattttcctcgctaattttactttttcta 19865377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 28229503 - 28229461
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  28229503 ttttttccgtcactaatttccctcgctaattttgctttttcta 28229461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 30928426 - 30928388
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttt 39  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  30928426 ttttttccgtcactaatttccctctctaattttgctttt 30928388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 46790091 - 46790133
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  46790091 ttttttccgtcactaatttccctcgctaattttgctttttcta 46790133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 48522609 - 48522651
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||| |||||||||||||||| ||||||||||||||||||    
T  48522609 ttttttctgtcactaattttcctcgctaattttgctttttcta 48522651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4340498 - 4340543
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaata 46  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||    
T  4340498 ttttttccgtcactaatttcccttgctaattttgctttttctaata 4340543  T

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Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 25679973 - 25680017
Alignment:
Q  2 tttttccgtcactaattttcctctctaattttgctttttctaata 46  Q
    ||||||| |||||||||||| |||||||||||||||||| |||||    
T  25679973 tttttccctcactaattttcgtctctaattttgctttttttaata 25680017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 41120785 - 41120734
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaataatgtat 52  Q
    |||||||| |||||||||| |||| |||||||||||||||||| || |||||    
T  41120785 ttttttccatcactaatttccctcgctaattttgctttttctattagtgtat 41120734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6412101 - 6412059
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||| |||||||| |||| ||||||||||||||||||    
T  6412101 ttttttccgttactaatttccctcgctaattttgctttttcta 6412059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 6459308 - 6459350
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||    
T  6459308 ttttttccgtcactaatttccctcgctaatttcgctttttcta 6459350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 7181603 - 7181561
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||  ||||||||||||||||||    
T  7181603 ttttttccgtcactaatttcccttgctaattttgctttttcta 7181561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 9259231 - 9259189
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||||||||  |||||||| ||||||||    
T  9259231 ttttttccgtcactaattttcctcgttaattttgttttttcta 9259189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 12161905 - 12161947
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||| ||||||||||| |||||||| |||||||||    
T  12161905 ttttttccgtcaataattttcctcgctaattttactttttcta 12161947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18894948 - 18894910
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttt 39  Q
    |||||| ||||||||||||||||| ||||||||||||||    
T  18894948 tttttttcgtcactaattttcctcgctaattttgctttt 18894910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 23457988 - 23458030
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||| ||||||||||| |||||||| |||||||||    
T  23457988 ttttttccgtcaataattttcctcgctaattttactttttcta 23458030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27253903 - 27253861
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||| ||||||||||| |||||||| |||||||||    
T  27253903 ttttttccgtcattaattttcctccctaatttttctttttcta 27253861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 29549509 - 29549551
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||| |||||||||||| |||| ||||||||||||||||||    
T  29549509 tttttttcgtcactaatttccctcgctaattttgctttttcta 29549551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 41752524 - 41752566
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| | || ||||||||||||||||||    
T  41752524 ttttttccgtcactaatttccgtcactaattttgctttttcta 41752566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 45839383 - 45839425
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| ||||  |||||||||||||||||    
T  45839383 ttttttccgtcactaatttccctcgttaattttgctttttcta 45839425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 50092346 - 50092304
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| |||||||| |||||||||    
T  50092346 ttttttccgtcactaatttccctcgctaatttttctttttcta 50092304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 51973515 - 51973557
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||| |||||||| |||| ||||||||||||||||||    
T  51973515 ttttttccgttactaatttccctcgctaattttgctttttcta 51973557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 14760960 - 14761013
Alignment:
Q  3 ttttccgtcactaattttcctctctaattttgctttttctaataatgtatcacc 56  Q
    ||||||||||| ||||| ||||| ||||||||||||||||| || ||| |||||    
T  14760960 ttttccgtcacaaatttccctctttaattttgctttttctagtagtgtctcacc 14761013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 17661141 - 17661186
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaata 46  Q
    ||||||||||||||||||| | ||  ||||||||||||||||||||    
T  17661141 ttttttccgtcactaatttccgtcgttaattttgctttttctaata 17661186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 18890597 - 18890556
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttct 42  Q
    |||||||| |||||||||| |||| |||||||||||||||||    
T  18890597 ttttttccatcactaatttccctcgctaattttgctttttct 18890556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 20290368 - 20290327
Alignment:
Q  2 tttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||||||||| |||| |||||||| |||||||||    
T  20290368 tttttccgtcactaatttccctcgctaattttactttttcta 20290327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 50845376 - 50845336
Alignment:
Q  3 ttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||| ||||| |||| ||||||||||||||||||    
T  50845376 ttttccgtcacaaatttccctccctaattttgctttttcta 50845336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 30420081 - 30420039
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  30420081 ttttttccgtcactaattttcctccctaattttgctttttcta 30420039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 13028864 - 13028813
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaataatgtat 52  Q
    |||||||||||||||||||||||| |||| ||||||||||||| || |||||    
T  13028864 ttttttccgtcactaattttcctcgctaagtttgctttttctagtagtgtat 13028813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 4586806 - 4586764
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  4586806 ttttttccgtcactaatttccctcgctaattttgctttttcta 4586764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 7111994 - 7111952
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  7111994 ttttttccgtcactaatttccctcgctaattttgctttttcta 7111952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19839268 - 19839310
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  19839268 ttttttccgtcactaatttccctcgctaattttgctttttcta 19839310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 22168357 - 22168399
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  22168357 ttttttccgtcactaatttccctcgctaattttgctttttcta 22168399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27040073 - 27040031
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  27040073 ttttttccgtcactaatttccctcgctaattttgctttttcta 27040031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 37378671 - 37378629
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||| ||||||||||| ||||||||||||||||||    
T  37378671 ttttttccgtcaataattttcctcgctaattttgctttttcta 37378629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 54539375 - 54539417
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  54539375 ttttttccgtcactaattttccttgctaattttgctttttcta 54539417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 55309260 - 55309218
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  55309260 ttttttccgtcactaatttccctcgctaattttgctttttcta 55309218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8878972 - 8879013
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttct 42  Q
    ||||||||||||||||||| ||||||| ||||||||||||||    
T  8878972 ttttttccgtcactaatttccctctctgattttgctttttct 8879013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 18051928 - 18051969
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttct 42  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  18051928 ttttttccgtcactaatttccctcactaattttgctttttct 18051969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 25026646 - 25026691
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaata 46  Q
    ||||||||||||||||||| |||| |||||||| ||||||||||||    
T  25026646 ttttttccgtcactaatttccctcactaattttactttttctaata 25026691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 45532627 - 45532582
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaata 46  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||||    
T  45532627 ttttttccgtcactaatttccctcgttaattttgctttttctaata 45532582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 9238673 - 9238634
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgcttttt 40  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  9238673 ttttttccgtcactaatttccctcgctaattttgcttttt 9238634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 13564960 - 13564921
Alignment:
Q  4 tttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  13564960 tttccgtcactaatttccctcgctaattttgctttttcta 13564921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 30269036 - 30268985
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaataatgtat 52  Q
    |||||||||||||| |||| |||| |||||||||||||||||| || |||||    
T  30269036 ttttttccgtcactgatttccctcgctaattttgctttttctagtagtgtat 30268985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 30283153 - 30283204
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaataatgtat 52  Q
    |||||||||||||| |||| |||| |||||||||||||||||| || |||||    
T  30283153 ttttttccgtcactgatttccctcgctaattttgctttttctagtagtgtat 30283204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 46286277 - 46286226
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaataatgtat 52  Q
    ||||||||||||||||||| | || |||||||||||||||||| || |||||    
T  46286277 ttttttccgtcactaatttccgtcactaattttgctttttctagtagtgtat 46286226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 4627126 - 4627084
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||| |||||| |||| ||||||||||||||||||    
T  4627126 ttttttccgtcattaatttccctcgctaattttgctttttcta 4627084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5473938 - 5473980
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||| ||||||||||||| |||| ||||||||||||||||||    
T  5473938 tttttcccgtcactaatttccctcgctaattttgctttttcta 5473980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 9670527 - 9670485
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| |||||||| |||||||||    
T  9670527 ttttttccgtcactaatttccctcgctaatttttctttttcta 9670485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9913347 - 9913389
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||||||||||||||| ||||||||  ||||||||    
T  9913347 ttttttccgtcactaattttcctccctaattttaatttttcta 9913389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 16915458 - 16915500
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||| ||||||||||||||| || |||||||||||||||    
T  16915458 ttttttccatcactaattttcctccctgattttgctttttcta 16915500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 32175785 - 32175743
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| ||||  |||||||||||||||||    
T  32175785 ttttttccgtcactaatttccctcgttaattttgctttttcta 32175743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 38619936 - 38619978
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||| |||||| |||| ||||||||||||||||||    
T  38619936 ttttttccgtcattaatttccctcgctaattttgctttttcta 38619978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 38645839 - 38645881
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||| |||||| |||| ||||||||||||||||||    
T  38645839 ttttttccgtcaataatttccctcgctaattttgctttttcta 38645881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 44783572 - 44783614
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||| ||||||||||||||    
T  44783572 ttttttccgtcactaatttccctcgctagttttgctttttcta 44783614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 45091350 - 45091392
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||    
T  45091350 ttttttccgtcactaatttccctcgctaattttgttttttcta 45091392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 34557272 - 34557304
Alignment:
Q  1 ttttttccgtcactaattttcctctctaatttt 33  Q
    |||||||||||||||||||||||| ||||||||    
T  34557272 ttttttccgtcactaattttcctcactaatttt 34557304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000004; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 22579397 - 22579352
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaata 46  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||    
T  22579397 ttttttccgtcactaatttccctcgctaattttgctttttctaata 22579352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 24661057 - 24661006
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaataatgtat 52  Q
    ||||||||||||||||||| |||| |||||||||||||||||| || |||||    
T  24661057 ttttttccgtcactaatttccctcgctaattttgctttttctagtagtgtat 24661006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 5192237 - 5192195
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||| ||||||||||||||| ||||||||||||||||||    
T  5192237 ttttttccttcactaattttcctcgctaattttgctttttcta 5192195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5360500 - 5360542
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  5360500 ttttttccgtcactaatttccctcgctaattttgctttttcta 5360542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 6065528 - 6065578
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaataatgta 51  Q
    |||||||||||| ||||||||||| |||||||||||||| |||||| ||||    
T  6065528 ttttttccgtcattaattttcctccctaattttgcttttcctaatagtgta 6065578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 6598555 - 6598597
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  6598555 ttttttccgtcactaatttccctcgctaattttgctttttcta 6598597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6605544 - 6605502
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  6605544 ttttttccgtcactaatttccctcgctaattttgctttttcta 6605502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9893054 - 9893096
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  9893054 ttttttccgtcactaatttccctcgctaattttgctttttcta 9893096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 12200785 - 12200827
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  12200785 ttttttccgtcactaatttccctcactaattttgctttttcta 12200827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15364506 - 15364464
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  15364506 ttttttccgtcactaatttccctcactaattttgctttttcta 15364464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 15448476 - 15448518
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  15448476 ttttttccgtcactaatttccctcgctaattttgctttttcta 15448518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 18048879 - 18048917
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttt 39  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  18048879 ttttttccgtcactaattttcctctctaattttgttttt 18048917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 26224519 - 26224561
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  26224519 ttttttccgtcactaatttccctcgctaattttgctttttcta 26224561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 28365002 - 28365044
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  28365002 ttttttccgtcactaatttccctcgctaattttgctttttcta 28365044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 30834008 - 30833966
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  30834008 ttttttccgtcactaatttccctcgctaattttgctttttcta 30833966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14886652 - 14886693
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttct 42  Q
    ||||||| |||||||||||||||| |||||||||||||||||    
T  14886652 ttttttctgtcactaattttcctccctaattttgctttttct 14886693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 25398093 - 25398142
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaataatgt 50  Q
    ||||||||||||||||||| |||| |||||||| ||||||||| ||||||    
T  25398093 ttttttccgtcactaatttccctcgctaatttttctttttctagtaatgt 25398142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 33191180 - 33191224
Alignment:
Q  10 tcactaattttcctctctaattttgctttttctaataatgtatca 54  Q
    |||||||||| |||| ||||||||||||||||||||| |||||||    
T  33191180 tcactaatttccctcgctaattttgctttttctaatagtgtatca 33191224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 6978368 - 6978419
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaataatgtat 52  Q
    |||||||||| |||||||| |||| |||||||||||||| |||||| |||||    
T  6978368 ttttttccgtaactaatttccctcgctaattttgcttttcctaatagtgtat 6978419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 15961455 - 15961404
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaataatgtat 52  Q
    ||||||||||||||||||| ||||  ||||||||||||||||| || |||||    
T  15961455 ttttttccgtcactaatttccctcgttaattttgctttttctagtagtgtat 15961404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 20692859 - 20692816
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaa 44  Q
    ||||||||||||||||||||||||  |||||||| |||||||||    
T  20692859 ttttttccgtcactaattttcctcgttaattttgttttttctaa 20692816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 495675 - 495633
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||  ||||||||||||||||||    
T  495675 ttttttccgtcactaatttcccttgctaattttgctttttcta 495633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1939290 - 1939248
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||| ||||||||||| |||| ||||||||||||||||||    
T  1939290 ttttttcggtcactaatttccctcgctaattttgctttttcta 1939248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9885334 - 9885376
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| || |||||||||||||||    
T  9885334 ttttttccgtcactaatttccctccctgattttgctttttcta 9885376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10458855 - 10458897
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| |||||||| |||||||||    
T  10458855 ttttttccgtcactaatttccctcactaattttactttttcta 10458897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12157424 - 12157382
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| ||||  |||||||||||||||||    
T  12157424 ttttttccgtcactaatttccctccttaattttgctttttcta 12157382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 16250850 - 16250808
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| ||||  |||||||||||||||||    
T  16250850 ttttttccgtcactaatttccctcgttaattttgctttttcta 16250808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 18492460 - 18492502
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| | || ||||||||||||||||||    
T  18492460 ttttttccgtcactaatttgcatcgctaattttgctttttcta 18492502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 20182236 - 20182278
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| |||||||| |||||||||    
T  20182236 ttttttccgtcactaatttccctcgctaattttactttttcta 20182278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 21141030 - 21141072
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| ||||  |||||||||||||||||    
T  21141030 ttttttccgtcactaatttccctcgttaattttgctttttcta 21141072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22153755 - 22153713
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| |||||||| |||||||||    
T  22153755 ttttttccgtcactaatttccctcgctaattttactttttcta 22153713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27796882 - 27796840
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||| |||||||||||| |||| ||||||||||||||||||    
T  27796882 tttttttcgtcactaatttccctcgctaattttgctttttcta 27796840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 9060181 - 9060222
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttct 42  Q
    |||||||||||||||||||  |||| ||||||||||||||||    
T  9060181 ttttttccgtcactaatttcgctctttaattttgctttttct 9060222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 11530318 - 11530367
Alignment:
Q  3 ttttccgtcactaattttcctctctaattttgctttttctaataatgtat 52  Q
    ||||||||||| ||||| |||| |||||||||||||| |||||| |||||    
T  11530318 ttttccgtcacaaatttccctccctaattttgcttttcctaatagtgtat 11530367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 13251426 - 13251385
Alignment:
Q  2 tttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||| ||||||||||||  ||||||||||||||||||||||    
T  13251426 ttttttcgtcactaatttctctctctaattttgctttttcta 13251385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 15509247 - 15509288
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttct 42  Q
    ||||||||||||||||||| |||| |||||||| ||||||||    
T  15509247 ttttttccgtcactaatttccctcgctaatttttctttttct 15509288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 21990222 - 21990181
Alignment:
Q  2 tttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||| |||||| |||| ||||||||||||||||||    
T  21990222 tttttccgtcattaatttccctcgctaattttgctttttcta 21990181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28668191 - 28668244
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaataatgtatca 54  Q
    |||||||||||||| |||| |||| |||||||| ||||||||| || |||||||    
T  28668191 ttttttccgtcactgatttccctcgctaattttactttttctagtagtgtatca 28668244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 12951801 - 12951837
Alignment:
Q  3 ttttccgtcactaattttcctctctaattttgctttt 39  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  12951801 ttttccgtcacaaatttccctctctaattttgctttt 12951837  T

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Target: scaffold0161 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 6886 - 6937
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaataatgtat 52  Q
    |||||||||||| |||||| |||| |||||||||||||||||| ||||||||    
T  6886 ttttttccgtcaataatttccctcgctaattttgctttttctagtaatgtat 6937  T

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Target: scaffold0576 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 9277 - 9235
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  9277 ttttttccgtcactaatttccctcactaattttgctttttcta 9235  T

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Target: scaffold0128 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 10711 - 10669
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  10711 ttttttccgtcactaatttccctcgctaattttgctttttcta 10669  T

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Target: scaffold0019 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 173537 - 173581
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaata 46  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||    
T  173537 ttttttccgtcactaattt-cctcgctaattttgctttttctaata 173581  T

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Target: scaffold0599 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 7598 - 7638
Alignment:
Q  3 ttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  7598 ttttccgtcactaatttccctcgctaattttgctttttcta 7638  T

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Target: scaffold0108 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 12743 - 12783
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttc 41  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  12743 ttttttccgtcactaatttccctcgctaattttgctttttc 12783  T

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Target: scaffold0219 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 19694 - 19745
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttctaataatgtat 52  Q
    ||||||||||||||||||| |||  |||||||||||||||||| || |||||    
T  19694 ttttttccgtcactaatttcccttgctaattttgctttttctagtagtgtat 19745  T

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Target: scaffold0717 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 966 - 924
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||| |||||| |||| ||||||||||||||||||    
T  966 ttttttccgtcagtaatttccctcgctaattttgctttttcta 924  T

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Target: scaffold0603 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6027 - 5985
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||    
T  6027 ttttttccgtcactaatttccctcgctaattttgttttttcta 5985  T

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Target: scaffold0240 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15038 - 14996
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||| ||||||||||| |||| ||||||||||||||||||    
T  15038 ttttttcggtcactaatttccctcgctaattttgctttttcta 14996  T

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Target: scaffold0184 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 7547 - 7589
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||||||||  ||||||| |||||||||    
T  7547 ttttttccgtcactaattttcctcgttaattttactttttcta 7589  T

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Target: scaffold0076 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 26574 - 26616
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| | || ||||||||||||||||||    
T  26574 ttttttccgtcactaatttccgtcactaattttgctttttcta 26616  T

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Target: scaffold0023 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 39751 - 39709
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||| |||||||||| |||| ||||||||||||||||||    
T  39751 ttttttccatcactaatttccctcgctaattttgctttttcta 39709  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 22302 - 22344
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||| |||||||||||| |||| ||||||||||||||||||    
T  22302 tttttttcgtcactaatttccctcgctaattttgctttttcta 22344  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 17665 - 17623
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||    
T  17665 ttttttccgtcactaatttccctcgctaattttgttttttcta 17623  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 182621 - 182663
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||| |||||||| |||||||||    
T  182621 ttttttccgtcactaatttccctcgctaattttactttttcta 182663  T

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Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 219727 - 219769
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| | || ||||||||||||||||||    
T  219727 ttttttccgtcactaatttccgtcgctaattttgctttttcta 219769  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 84722 - 84680
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||| ||||||||||| |||| ||||||||||||||||||    
T  84722 ttttttctgtcactaatttccctcactaattttgctttttcta 84680  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000005; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8158 - 8116
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||| |||||| |||| ||||||||||||||||||    
T  8158 ttttttccgtcattaatttccctcgctaattttgctttttcta 8116  T

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Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 21890 - 21848
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    |||||||||||| |||||| |||| ||||||||||||||||||    
T  21890 ttttttccgtcattaatttccctcgctaattttgctttttcta 21848  T

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Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 84394 - 84436
Alignment:
Q  1 ttttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||||| |||  ||||||||||||||||||    
T  84394 ttttttccgtcactaatttcccttgctaattttgctttttcta 84436  T

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Target: scaffold0655 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 3208 - 3168
Alignment:
Q  3 ttttccgtcactaattttcctctctaattttgctttttcta 43  Q
    ||||||||||||||||| |||| |||||||| |||||||||    
T  3208 ttttccgtcactaatttccctccctaatttttctttttcta 3168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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