View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18374_high_6 (Length: 476)
Name: NF18374_high_6
Description: NF18374
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18374_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 422; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 422; E-Value: 0
Query Start/End: Original strand, 18 - 467
Target Start/End: Original strand, 26181130 - 26181579
Alignment:
| Q |
18 |
gaatggtgtacaatatatgccatgactctttatttccgaattccatcatcatccatatatctgtacccctatcattgcaatcaaatatgcacaagaaatc |
117 |
Q |
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| T |
26181130 |
gaatggtgtacaatatatgccatgactctttatttccgaattccatcatcatccatatatctgtacccctatcattgcaatcaaatatgcacaagaaatc |
26181229 |
T |
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| Q |
118 |
ctttatgacacccaaggtcaaactaccctttcctctagcagtaggaagcaaaagcttctggtatgtctcagtggccagatcaagagaaaaaagctcacca |
217 |
Q |
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||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
26181230 |
ctttaagacacccaaggtcaaactaccctttcctctagaagtaggaagcaaaagcttctggtatgtctcagtggctagatcaagagaaaaaagctcacca |
26181329 |
T |
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| Q |
218 |
gctaaccaattaactgtcccactcagaaatagtcccgttttaggaagtgtgttactgcaacgttttggaaagtcatggatcgccctccaggaacaatccg |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26181330 |
gctaaccaattaactgtcccactcagaaatagtcccgttttaggaagtgtgttactgcaacgttttggaaagtcatggatcgccctccaggaacaatccg |
26181429 |
T |
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| Q |
318 |
taggatcggaccccaaggtataaatactagttttaggggtggggggtttgcggataaaagaaatagcaacaatcttatacttatgagtggtattatcatg |
417 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26181430 |
taggatcggaccccaaggtataaatactagttttaggagtggggggtttgcggataaaagaaatagcaacaatcttatacttatgagtggtattatcata |
26181529 |
T |
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| Q |
418 |
cccaaagctataaaaattagcttgaacgctcattcttcttcttgtctgtg |
467 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||| |||| |
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| T |
26181530 |
cccaaagctataaaagttagcttgaacgctcattcttcttcttgtgtgtg |
26181579 |
T |
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