View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18377_low_2 (Length: 475)

Name: NF18377_low_2
Description: NF18377
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18377_low_2
NF18377_low_2
[»] chr2 (30 HSPs)
chr2 (23-431)||(386981-387389)
chr2 (23-284)||(39338731-39338992)
chr2 (23-284)||(10524051-10524315)
chr2 (30-252)||(7874278-7874498)
chr2 (30-257)||(14106396-14106623)
chr2 (30-240)||(14405197-14405405)
chr2 (55-232)||(5254263-5254438)
chr2 (124-227)||(4471935-4472035)
chr2 (117-239)||(10173539-10173659)
chr2 (23-202)||(17116745-17116923)
chr2 (155-232)||(1269490-1269567)
chr2 (133-227)||(22885111-22885202)
chr2 (157-232)||(16959989-16960064)
chr2 (93-240)||(37770580-37770723)
chr2 (155-228)||(2062900-2062973)
chr2 (155-227)||(13337286-13337358)
chr2 (155-227)||(15126407-15126479)
chr2 (164-227)||(36276178-36276240)
chr2 (155-217)||(7695985-7696047)
chr2 (190-227)||(4162052-4162089)
chr2 (30-74)||(7460839-7460883)
chr2 (107-218)||(16952334-16952443)
chr2 (107-218)||(17022999-17023108)
chr2 (107-218)||(17060305-17060414)
chr2 (180-240)||(23650384-23650444)
chr2 (187-227)||(27739987-27740027)
chr2 (179-227)||(33788653-33788701)
chr2 (153-224)||(18681080-18681151)
chr2 (125-218)||(17079190-17079281)
chr2 (155-221)||(34230219-34230285)
[»] chr3 (33 HSPs)
chr3 (23-252)||(19176489-19176719)
chr3 (23-242)||(43012372-43012590)
chr3 (23-284)||(20611737-20611997)
chr3 (30-252)||(40023446-40023666)
chr3 (23-252)||(9583920-9584147)
chr3 (34-283)||(2392383-2392632)
chr3 (26-257)||(45163835-45164067)
chr3 (23-257)||(23328216-23328449)
chr3 (23-227)||(17550969-17551167)
chr3 (23-208)||(47235729-47235913)
chr3 (23-283)||(34475622-34475880)
chr3 (95-257)||(45398778-45398939)
chr3 (23-243)||(31482880-31483098)
chr3 (34-283)||(2394147-2394379)
chr3 (23-192)||(53247947-53248116)
chr3 (179-232)||(14755286-14755339)
chr3 (155-232)||(47945713-47945790)
chr3 (37-171)||(21342603-21342735)
chr3 (106-227)||(33143899-33144018)
chr3 (155-224)||(37123397-37123466)
chr3 (155-224)||(39021273-39021342)
chr3 (155-251)||(1652883-1652979)
chr3 (188-232)||(14879442-14879486)
chr3 (170-240)||(14193939-14194009)
chr3 (170-227)||(30127274-30127332)
chr3 (170-227)||(5556582-5556639)
chr3 (190-227)||(20710740-20710777)
chr3 (23-74)||(30352307-30352356)
chr3 (170-227)||(2782081-2782138)
chr3 (155-224)||(30935387-30935456)
chr3 (157-221)||(823434-823498)
chr3 (191-227)||(24099360-24099396)
chr3 (171-227)||(31424248-31424304)
[»] chr7 (38 HSPs)
chr7 (23-284)||(38306215-38306476)
chr7 (23-281)||(3867073-3867331)
chr7 (23-285)||(5860154-5860416)
chr7 (23-284)||(47325751-47326012)
chr7 (23-277)||(33435070-33435324)
chr7 (23-284)||(41089614-41089875)
chr7 (23-284)||(3419521-3419783)
chr7 (23-257)||(37794971-37795204)
chr7 (30-247)||(34389954-34390169)
chr7 (23-257)||(35745688-35745926)
chr7 (23-284)||(10244136-10244397)
chr7 (23-217)||(44353429-44353623)
chr7 (101-257)||(6584891-6585046)
chr7 (96-215)||(48161964-48162083)
chr7 (40-283)||(25160770-25161011)
chr7 (30-281)||(8745110-8745358)
chr7 (23-112)||(31972000-31972089)
chr7 (156-227)||(9349761-9349832)
chr7 (170-240)||(1320793-1320863)
chr7 (170-224)||(24324810-24324864)
chr7 (170-240)||(42533264-42533334)
chr7 (170-227)||(6716748-6716805)
chr7 (170-227)||(13311851-13311908)
chr7 (117-239)||(3478352-3478471)
chr7 (155-224)||(12480901-12480970)
chr7 (187-227)||(38485568-38485608)
chr7 (170-240)||(16828948-16829018)
chr7 (170-240)||(16954652-16954722)
chr7 (149-227)||(23983207-23983285)
chr7 (202-284)||(44755581-44755663)
chr7 (155-240)||(46133274-46133360)
chr7 (190-227)||(46262151-46262188)
chr7 (30-74)||(6585045-6585089)
chr7 (193-227)||(17802851-17802885)
chr7 (170-227)||(11379139-11379196)
chr7 (190-227)||(27993568-27993605)
chr7 (190-227)||(35206725-35206762)
chr7 (26-74)||(3419265-3419313)
[»] chr4 (31 HSPs)
chr4 (23-284)||(8254981-8255242)
chr4 (23-284)||(8268399-8268660)
chr4 (23-284)||(30964395-30964652)
chr4 (30-257)||(31050535-31050761)
chr4 (30-246)||(2825776-2825990)
chr4 (23-284)||(4305679-4305939)
chr4 (23-222)||(30167430-30167628)
chr4 (30-211)||(35341213-35341391)
chr4 (123-240)||(25753171-25753285)
chr4 (93-227)||(38637171-38637301)
chr4 (23-74)||(8706010-8706061)
chr4 (155-240)||(22811157-22811242)
chr4 (174-227)||(40813797-40813850)
chr4 (155-240)||(53823418-53823503)
chr4 (155-227)||(38929839-38929911)
chr4 (183-225)||(39421038-39421080)
chr4 (168-227)||(36962626-36962684)
chr4 (169-227)||(39041285-39041343)
chr4 (158-227)||(46698784-46698854)
chr4 (170-227)||(6599957-6600014)
chr4 (155-224)||(16501746-16501815)
chr4 (170-227)||(21387216-21387273)
chr4 (155-240)||(35800488-35800573)
chr4 (155-240)||(49747526-49747611)
chr4 (155-227)||(28966879-28966951)
chr4 (154-232)||(2061734-2061812)
chr4 (193-227)||(53756768-53756802)
chr4 (170-219)||(2792286-2792335)
chr4 (158-227)||(24740103-24740172)
chr4 (195-227)||(37707392-37707424)
chr4 (155-215)||(41117964-41118024)
[»] chr8 (25 HSPs)
chr8 (23-284)||(24995260-24995522)
chr8 (23-284)||(31207228-31207488)
chr8 (23-284)||(9519453-9519715)
chr8 (28-284)||(36630791-36631047)
chr8 (23-284)||(37986724-37986985)
chr8 (23-284)||(32066161-32066422)
chr8 (23-284)||(34388872-34389132)
chr8 (23-217)||(20138448-20138642)
chr8 (23-257)||(15821245-15821478)
chr8 (23-242)||(12898141-12898358)
chr8 (23-227)||(41893268-41893469)
chr8 (60-257)||(16457364-16457559)
chr8 (95-208)||(38577728-38577840)
chr8 (106-284)||(10248504-10248680)
chr8 (155-222)||(32945700-32945767)
chr8 (155-284)||(17656999-17657128)
chr8 (158-227)||(15906698-15906767)
chr8 (95-152)||(35816181-35816238)
chr8 (155-227)||(30236125-30236197)
chr8 (38-138)||(22773598-22773699)
chr8 (182-240)||(10552267-10552325)
chr8 (155-227)||(12198066-12198138)
chr8 (155-227)||(12442494-12442566)
chr8 (176-227)||(33967338-33967389)
chr8 (190-227)||(40531244-40531281)
[»] chr1 (30 HSPs)
chr1 (26-284)||(41920407-41920669)
chr1 (23-284)||(5389287-5389548)
chr1 (26-283)||(24449799-24450056)
chr1 (23-284)||(31585625-31585887)
chr1 (23-284)||(46692685-46692946)
chr1 (23-247)||(5459153-5459376)
chr1 (49-277)||(24684370-24684598)
chr1 (30-257)||(7857635-7857860)
chr1 (53-284)||(30685800-30686031)
chr1 (30-252)||(27031714-27031934)
chr1 (30-252)||(24658916-24659135)
chr1 (30-252)||(46814341-46814561)
chr1 (160-283)||(20113523-20113647)
chr1 (155-227)||(19598648-19598720)
chr1 (179-240)||(6583237-6583298)
chr1 (155-220)||(27102210-27102275)
chr1 (155-240)||(32864558-32864643)
chr1 (170-240)||(17033585-17033655)
chr1 (179-240)||(9313310-9313371)
chr1 (179-227)||(38544759-38544807)
chr1 (23-110)||(6764247-6764334)
chr1 (155-240)||(34774870-34774955)
chr1 (170-227)||(15840924-15840981)
chr1 (178-227)||(22200020-22200069)
chr1 (164-224)||(2877652-2877711)
chr1 (187-227)||(4651792-4651832)
chr1 (178-217)||(22239699-22239738)
chr1 (155-224)||(16147570-16147639)
chr1 (155-223)||(10785456-10785524)
chr1 (187-227)||(30655572-30655612)
[»] chr5 (21 HSPs)
chr5 (23-247)||(34378090-34378313)
chr5 (23-284)||(698315-698576)
chr5 (29-246)||(29087474-29087689)
chr5 (23-284)||(18593197-18593458)
chr5 (107-194)||(7162267-7162353)
chr5 (23-114)||(7161882-7161973)
chr5 (155-240)||(13954231-13954316)
chr5 (155-227)||(7195236-7195308)
chr5 (179-240)||(7392052-7392113)
chr5 (156-232)||(22675322-22675398)
chr5 (102-239)||(14302377-14302511)
chr5 (155-224)||(21402834-21402903)
chr5 (179-252)||(33258903-33258976)
chr5 (155-227)||(27713081-27713153)
chr5 (179-227)||(39184208-39184256)
chr5 (155-239)||(25992007-25992091)
chr5 (155-239)||(26045961-26046045)
chr5 (155-209)||(8297498-8297552)
chr5 (191-224)||(12046270-12046303)
chr5 (158-227)||(23426356-23426425)
chr5 (59-150)||(18313544-18313636)
[»] chr6 (16 HSPs)
chr6 (23-284)||(3117447-3117708)
chr6 (161-281)||(16510304-16510425)
chr6 (155-240)||(32935336-32935421)
chr6 (23-90)||(10541980-10542047)
chr6 (106-225)||(20701754-20701870)
chr6 (106-227)||(26215970-26216088)
chr6 (181-254)||(26534742-26534815)
chr6 (179-238)||(9224042-9224101)
chr6 (173-224)||(34105428-34105479)
chr6 (23-84)||(14663231-14663292)
chr6 (170-227)||(34092807-34092864)
chr6 (201-284)||(3880626-3880710)
chr6 (156-240)||(21266112-21266196)
chr6 (156-223)||(13423482-13423549)
chr6 (181-252)||(12794101-12794173)
chr6 (187-227)||(34090375-34090415)
[»] scaffold0068 (1 HSPs)
scaffold0068 (40-283)||(35655-35897)
[»] scaffold0343 (1 HSPs)
scaffold0343 (26-197)||(5747-5918)
[»] scaffold0200 (1 HSPs)
scaffold0200 (155-240)||(19382-19467)
[»] scaffold0119 (1 HSPs)
scaffold0119 (155-232)||(42135-42212)
[»] scaffold0063 (1 HSPs)
scaffold0063 (155-240)||(58126-58211)
[»] scaffold0050 (1 HSPs)
scaffold0050 (173-240)||(36706-36773)
[»] scaffold1613 (1 HSPs)
scaffold1613 (179-227)||(1038-1086)
[»] scaffold0620 (2 HSPs)
scaffold0620 (173-227)||(3842-3896)
scaffold0620 (170-227)||(8141-8198)


Alignment Details
Target: chr2 (Bit Score: 365; Significance: 0; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 23 - 431
Target Start/End: Complemental strand, 387389 - 386981
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcg 122  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  387389 aagaacaccctcaaaataaaactcccagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcg 387290  T
Q  123 cgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccac 222  Q
     ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  387289 tgacctccgatccaccaaaagagcacaaaaacaaaagctcaaaaaccaacttgagtcaaagaattgactcccgatctcaaatcaaaagtgatcagcccac 387190  T
Q  223 cagacgttagtaccaaattagcaggacacctctcggcccggtgtaccagagaaaaaccaaattagcatttgtagagcaaggacaagtttcttaaagagat 322  Q
    ||||| ||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  387189 cagactttagtaccaaattagcagggcacccctcgccccggtgtaccagagaaaaaccaaattagcatttgtagagcaaggacaagtttcttaaagagat 387090  T
Q  323 ggacctcatatcttttaagtaattgcctcataagcagaagctaaattgaattgactccatcattagaaagtttccatgccaaacaatatgctacattgtc 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  387089 ggacctcatatcttttaagtaattgcctcataagcagaagctaaattgaattgactccatcattagaaagtttccatgccaaacaatctgctacattgtc 386990  T
Q  423 ccttaatta 431  Q
    |||||||||    
T  386989 ccttaatta 386981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 23 - 284
Target Start/End: Original strand, 39338731 - 39338992
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctc 121  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||| |||   ||||||||||||| || ||| || ||| |||||  || |||||||    
T  39338731 aagaacaccctcaaaataaaactcccagacctcaacacccaagctgagtcacaattcgaagagcacctaaccgaaggatcattcagctatcacaaacctc 39338830  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    ||||||||||||||||| ||||||||||| |   |||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||    
T  39338831 gcgacctccgatccaccgaaagagcacaacac--aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagcgatcggccca 39338928  T
Q  222 ccagacgttagtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 284  Q
    ||||||  |||||||||||||||||| |||| ||||  ||||||  |||| |||||||||||||    
T  39338929 ccagactatagtaccaaattagcagggcacccctcgcccccggtacaccaaagaaaaaccaaat 39338992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 23 - 284
Target Start/End: Complemental strand, 10524315 - 10524051
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagct-tccaaaacctc 121  Q
    |||||||||||| |||||||||||| | |||||||||||||||||||||||| ||||||||||||||| || ||| || ||||||||| ||  |||||||    
T  10524315 aagaacaccctccaaataaaactcccaaaccccaacacccaagctgagccacatatcgaagagcacctaaccgaaggatcatgcagctatcacaaacctc 10524216  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaaga----attgactcccgatcttgaatcaaaagtgatcgg 217  Q
    |||||||||||  |||| ||||||||||| |   |||||||||||||||||||||||||||||    ||||||||||||||| |||||||||||||||||    
T  10524215 gcgacctccga-acaccgaaagagcacaaca--caaagcccaaaaaccaacttgagtcaaagaatatattgactcccgatctcgaatcaaaagtgatcgg 10524119  T
Q  218 cccaccagacgttagtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 284  Q
    ||||||||||  ||| |||||||| ||||| |||||||||  ||| ||  ||||||||||||||||||    
T  10524118 cccaccagactatagcaccaaattggcagggcacctctcgcccccagtagaccagagaaaaaccaaat 10524051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 30 - 252
Target Start/End: Complemental strand, 7874498 - 7874278
Alignment:
Q  30 ccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctc 129  Q
    |||||||||||||||||| ||||  |||||||||||||||||||| | ||||| ||| ||| ||  |||||||| | || ||||| |||||| |||||||    
T  7874498 ccctcaaaataaaactccaagacttcaacacccaagctgagccacat-tcgaaaagctcctaaccaaatgaacaagtagtttccacaacctctcgacctc 7874400  T
Q  130 cgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgt 229  Q
    ||||||||| || |||||||||| |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||| |||||||||| |    
T  7874399 cgatccaccgaatgagcacaaaa-caaaagcccaaaaaccaacttgagtcaaagagctgactcccgatctcgaatcaaaagtgatcgacccaccagactt 7874301  T
Q  230 tagtaccaaattagcaggacacc 252  Q
    ||| ||||||| |||||| ||||    
T  7874300 tagaaccaaatcagcagggcacc 7874278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 30 - 257
Target Start/End: Original strand, 14106396 - 14106623
Alignment:
Q  30 ccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctc 129  Q
    |||||||||||||||||  ||||  |||||||||||||||||||| | ||| | ||| | | || |||||| ||| || |||||| |||||| |||||||    
T  14106396 ccctcaaaataaaactctcagacttcaacacccaagctgagccacat-tcgtaaagctcttaaccgaatgatcatacaacttccacaacctctcgacctc 14106494  T
Q  130 cgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaact-tgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacg 228  Q
     |||||||| ||||||||||||||||||| ||||||||||||   |||   |||||  |||||||||||||||||||||||||||||||||||||||||     
T  14106495 tgatccaccgaaagagcacaaaaacaaaaacccaaaaaccaaaactgatctaaagagctgactcccgatcttgaatcaaaagtgatcggcccaccagact 14106594  T
Q  229 ttagtaccaaattagcaggacacctctcg 257  Q
    |||| ||||||| |||||| |||| ||||    
T  14106595 ttaggaccaaatcagcagggcacccctcg 14106623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 30 - 240
Target Start/End: Complemental strand, 14405405 - 14405197
Alignment:
Q  30 ccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctc 129  Q
    |||||||||||||||||| ||||  |||||||||||  ||||||| |  |||  ||| ||| ||  ||||||| ||||| ||||| |||| | |||| ||    
T  14405405 ccctcaaaataaaactcccagacttcaacacccaagtcgagccacatg-cgacaagctcctaaccaaatgaacgtgcagtttccacaaccactcgacttc 14405307  T
Q  130 cgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgt 229  Q
     |||||||| ||||||||||||| |||||||||||||||||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||| |    
T  14405306 tgatccaccgaaagagcacaaaa-caaaagcccaaaaaccaacttgagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactt 14405208  T
Q  230 tagtaccaaat 240  Q
    ||| |||||||    
T  14405207 tagaaccaaat 14405197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 55 - 232
Target Start/End: Complemental strand, 5254438 - 5254263
Alignment:
Q  55 caacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaac 154  Q
    |||||||||| ||||||||| | ||||| ||| ||  || |||||||||||||||||||| |||||| |||||||||||||||| ||| ||||| |||||    
T  5254438 caacacccaaactgagccacat-tcgaaaagctccaaaccgaatgaacatgcagcttccacaacctctcgacctccgatccaccgaaaaagcac-aaaac 5254341  T
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttag 232  Q
    |||||||| |||||||||||||  ||||||   ||||||||||||  ||| ||||||||||||||||| |||| ||||    
T  5254340 aaaagcccgaaaaccaacttgaaccaaagagcagactcccgatctcaaattaaaagtgatcggcccactagactttag 5254263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 4472035 - 4471935
Alignment:
Q  124 gacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccacc 223  Q
    |||||||| |||||||||||| ||| || |   |||||||||||| ||||||| |||||||| ||||||||||||| |||||||| | ||||||||||||    
T  4472035 gacctccggtccaccaaaagaacaccaata---aagcccaaaaacaaacttgaatcaaagaactgactcccgatctcgaatcaaaggcgatcggcccacc 4471939  T
Q  224 agac 227  Q
    ||||    
T  4471938 agac 4471935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 117 - 239
Target Start/End: Original strand, 10173539 - 10173659
Alignment:
Q  117 acctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcg 216  Q
    ||||| ||||||||||| |||| ||||| ||| ||  ||||||||||||| | |||||||| |||| || | ||| ||||||| ||||||||||||||||    
T  10173539 acctctcgacctccgattcaccgaaagaacaccaa--caaaagcccaaaaccaaacttgagccaaataacttacttccgatctcgaatcaaaagtgatcg 10173636  T
Q  217 gcccaccagacgttagtaccaaa 239  Q
    |||||| |||| |||| ||||||    
T  10173637 gcccactagactttaggaccaaa 10173659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 23 - 202
Target Start/End: Original strand, 17116745 - 17116923
Alignment:
Q  23 aagaacaccctcaaaataaaa-ctcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagct-tccaaaacct 120  Q
    ||||||||||||||||||||| |||  |||||||||||||||||||||||||| |  |||||||||||| || ||  || || | || | ||  ||||||    
T  17116745 aagaacaccctcaaaataaaaactctcagaccccaacacccaagctgagccacattacgaagagcacctaaccgatggatcaagtagatatcacaaacct 17116844  T
Q  121 cgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttga 202  Q
    |||||||||| ||| | | ||| |||||||||   |||||| |||||||||| ||||||||| || |||||||| |||||||    
T  17116845 cgcgacctccaatctatcgaaaaagcacaaaa--caaagcctaaaaaccaacatgagtcaaa-aactgactcccaatcttga 17116923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 1269567 - 1269490
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttag 232  Q
    |||| ||||||| | |||||||| ||||||| ||||| ||||||| ||||||||||||||||||||||||||| ||||    
T  1269567 aaaatcccaaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttag 1269490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 227
Target Start/End: Original strand, 22885111 - 22885202
Alignment:
Q  133 tccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    |||||| ||||| ||| |||||||   ||||||| | |||||||  ||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  22885111 tccaccgaaagaacaccaaaacaa---cccaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac 22885202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 16960064 - 16959989
Alignment:
Q  157 aagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttag 232  Q
    |||||||||| | |||||||| ||||||| |||||| |||||| |||||||||| |||||||||||||||| ||||    
T  16960064 aagcccaaaaccaaacttgagccaaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagactttag 16959989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 93 - 240
Target Start/End: Original strand, 37770580 - 37770723
Alignment:
Q  93 ctgaatgaacatgcagcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactc 192  Q
    ||||| || ||| |||||||||| ||||| ||||||||||| |||| |||||    ||  | |||||||||||| | || ||||   |||||||||||||    
T  37770580 ctgaaagatcattcagcttccaacacctctcgacctccgattcaccgaaaga----aaccataaaagcccaaaaccaaaattgatctaaagaattgactc 37770675  T
Q  193 ccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 240  Q
    | ||||  |||||||||||||||||||||||| || |||| |||||||    
T  37770676 ctgatccagaatcaaaagtgatcggcccaccaaaccttaggaccaaat 37770723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 228
Target Start/End: Complemental strand, 2062973 - 2062900
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacg 228  Q
    |||||||||||| | |||||||| ||||||  ||||||||||||| ||||||||||  ||||||||||||||||    
T  2062973 aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcaatcggcccaccagacg 2062900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 13337358 - 13337286
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||| |||||| | |||||||||||||||| ||||| ||||| | ||||||||||||||||||||| |||||    
T  13337358 aaaagtccaaaacctaacttgagtcaaagaactgacttccgatttcgaatcaaaagtgatcggcccatcagac 13337286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 15126407 - 15126479
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    |||||||||||| | ||| |||| |||||||  |||||||||||| ||||||||| |||||||||||||||||    
T  15126407 aaaagcccaaaaccaaacatgagccaaagaaccgactcccgatctcgaatcaaaaatgatcggcccaccagac 15126479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 227
Target Start/End: Original strand, 36276178 - 36276240
Alignment:
Q  164 aaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||| ||||||||||||||| |||||||||||||| |||||||||| || | |||||||||||    
T  36276178 aaaacaaacttgagtcaaaga-ttgactcccgatctcgaatcaaaagcgaacagcccaccagac 36276240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 7696047 - 7695985
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcgg 217  Q
    |||||||||||| | |||||||| ||||||| ||||||||| | | |||||||||||||||||    
T  7696047 aaaagcccaaaacctaacttgagccaaagaactgactcccggtatcgaatcaaaagtgatcgg 7695985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 4162052 - 4162089
Alignment:
Q  190 ctcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    |||||||||| |||||||||||||||||||||||||||    
T  4162052 ctcccgatctcgaatcaaaagtgatcggcccaccagac 4162089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 7460883 - 7460839
Alignment:
Q  30 ccctcaaaataaaactcctagaccccaacacccaagctgagccac 74  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||    
T  7460883 ccctcaaaataaaactcccagacttcaacacccaagctgagccac 7460839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 218
Target Start/End: Original strand, 16952334 - 16952443
Alignment:
Q  107 agcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatca 206  Q
    ||||||||  ||||| | |||||||||||||| ||||| ||| |||  ||| | |||||| | |||||||| ||||||| || |||||||||| ||||||    
T  16952334 agcttccaccacctctcaacctccgatccaccgaaagaacaccaaa--aaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatca 16952431  T
Q  207 aaagtgatcggc 218  Q
    |||  |||||||    
T  16952432 aaaaagatcggc 16952443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 218
Target Start/End: Original strand, 17022999 - 17023108
Alignment:
Q  107 agcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatca 206  Q
    ||||||||  ||||| | |||||||||||||| ||||| ||| |||  ||| | |||||| | |||||||| ||||||| || |||||||||| ||||||    
T  17022999 agcttccaccacctctcaacctccgatccaccgaaagaacaccaaa--aaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatca 17023096  T
Q  207 aaagtgatcggc 218  Q
    |||  |||||||    
T  17023097 aaaaagatcggc 17023108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 218
Target Start/End: Original strand, 17060305 - 17060414
Alignment:
Q  107 agcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatca 206  Q
    ||||||||  ||||| | |||||||||||||| ||||| ||| |||  ||| | |||||| | |||||||| ||||||| || |||||||||| ||||||    
T  17060305 agcttccaccacctctcaacctccgatccaccgaaagaacaccaaa--aaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatca 17060402  T
Q  207 aaagtgatcggc 218  Q
    |||  |||||||    
T  17060403 aaaaagatcggc 17060414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 23650444 - 23650384
Alignment:
Q  180 aaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 240  Q
    |||||| ||||||||||||| |||||||||| |||| |||||||||||  ||| |||||||    
T  23650444 aaagaaatgactcccgatctcgaatcaaaagcgatcagcccaccagactctagaaccaaat 23650384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 187 - 227
Target Start/End: Complemental strand, 27740027 - 27739987
Alignment:
Q  187 tgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    |||||| ||||||||||||||||| ||||||||||||||||    
T  27740027 tgactctcgatcttgaatcaaaagcgatcggcccaccagac 27739987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 33788653 - 33788701
Alignment:
Q  179 caaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||||| |||||||| |||| |||||||||| ||||||||||||||||    
T  33788653 caaagaactgactcccaatctcgaatcaaaagcgatcggcccaccagac 33788701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 18681151 - 18681080
Alignment:
Q  153 acaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccacca 224  Q
    |||||||||||||| | |||||||  || |||| ||||||||||||| |||||||| |  ||||||||||||    
T  18681151 acaaaagcccaaaaccaaacttgaaccagagaactgactcccgatctcgaatcaaatgcaatcggcccacca 18681080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 218
Target Start/End: Complemental strand, 17079281 - 17079190
Alignment:
Q  125 acctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggc 218  Q
    |||||||||||||| ||||| ||| |||  ||| | |||||| | |||||||| ||||||| || |||||||||| |||||||||  |||||||    
T  17079281 acctccgatccaccgaaagaacaccaaa--aaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaaaagatcggc 17079190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 34230285 - 34230219
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    |||||||||||| | |||||||  ||||||| ||||||| ||||| |||| |||| |||||||||||    
T  34230285 aaaagcccaaaatcaaacttgatccaaagaactgactcctgatctcgaataaaaaatgatcggccca 34230219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 145; Significance: 4e-76; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 23 - 252
Target Start/End: Complemental strand, 19176719 - 19176489
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaat--gaacatgcagcttccaaaacct 120  Q
    |||||||||||||||||||||| || ||||||| |||||||||||||||||| |  ||||||||||||||| |||   || ||||||||||||| |||||    
T  19176719 aagaacaccctcaaaataaaacacccagaccccgacacccaagctgagccacattacgaagagcacctgaccgaaaaggatcatgcagcttccacaacct 19176620  T
Q  121 cgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccc 220  Q
     ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  19176619 tgcgacctccgatccaccaaaagagcacaaat-caaaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggccc 19176521  T
Q  221 accagacgttagtaccaaattagcaggacacc 252  Q
    ||||||| |||| |||||||||||||| ||||    
T  19176520 accagactttagaaccaaattagcagggcacc 19176489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 23 - 242
Target Start/End: Complemental strand, 43012590 - 43012372
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcg 122  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||| || |||||| |||||| |||||||    
T  43012590 aagaacaccctcaaattaaaactcctagaccccaacacccaagctgagccacatttcgaagagcacctgaccgaacgatcatgcaacttccacaacctcg 43012491  T
Q  123 cgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccac 222  Q
    ||||||| ||| |||| ||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||    
T  43012490 cgacctctgattcaccgaaagagcac-aaaacaaaagctcaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcgggccac 43012392  T
Q  223 cagacgttagtaccaaatta 242  Q
    ||||| |||| |||||||||    
T  43012391 cagactttagaaccaaatta 43012372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 23 - 284
Target Start/End: Complemental strand, 20611997 - 20611737
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctc 121  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||| ||| | ||||||||||||| || ||| || ||| |||||  || |||||||    
T  20611997 aagaacaccctcagaataaaactcctagaccc-aacacccaagctgagtcacatttcgaagagcacctaaccgaaggatcattcagctatcacaaacctc 20611899  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    ||||||||||||||||| |||||||||||     ||||||||||||||||||| |||||||||| ||||||||||||| ||||||||| |||||||||||    
T  20611898 gcgacctccgatccaccgaaagagcacaacgc--aaagcccaaaaaccaacttaagtcaaagaactgactcccgatctcgaatcaaaaatgatcggccca 20611801  T
Q  222 ccagacgttagtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 284  Q
     || ||  |||||| ||||||||||| |||| ||||  ||||||  ||||||||||||||||||    
T  20611800 acaaactatagtacgaaattagcagggcacccctcgcccccggtacaccagagaaaaaccaaat 20611737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 30 - 252
Target Start/End: Original strand, 40023446 - 40023666
Alignment:
Q  30 ccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctc 129  Q
    |||||||||||||||||| ||||  |||||||| ||||||||||| | ||||| ||| ||| || |||||||||||||||||||| |||||| || ||||    
T  40023446 ccctcaaaataaaactcccagactacaacaccctagctgagccacat-tcgaaaagctcctaaccgaatgaacatgcagcttccacaacctcccgtcctc 40023544  T
Q  130 cgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgt 229  Q
     |||||||| ||||||||||||| ||||||||||||||||||||| || |||||||| |||||||||||| ||||||||||||||||| ||||||||| |    
T  40023545 tgatccaccgaaagagcacaaaa-caaaagcccaaaaaccaacttaagccaaagaatcgactcccgatctcgaatcaaaagtgatcggtccaccagactt 40023643  T
Q  230 tagtaccaaattagcaggacacc 252  Q
    ||  || |||| |||||| ||||    
T  40023644 taaaacaaaatcagcagggcacc 40023666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 23 - 252
Target Start/End: Original strand, 9583920 - 9584147
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcg 122  Q
    ||||||| ||||||||||||||||| ||||||||| |||||||| |||||||   ||||||||| |||||| ||| || | |||  |||| | |||||||    
T  9583920 aagaacatcctcaaaataaaactcccagaccccaaaacccaagcagagccacaattcgaagagcgcctgaccgaaggatcgtgcgacttc-acaacctcg 9584018  T
Q  123 cgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccac 222  Q
    | |||||||||||||| ||||| ||||||| ||||||||||||||||| |||||| ||||||| ||||||||||||| ||||||||||||||||  ||||    
T  9584019 caacctccgatccaccgaaagatcacaaaa-caaaagcccaaaaaccatcttgagacaaagaactgactcccgatctcgaatcaaaagtgatcgatccac 9584117  T
Q  223 cagacgttagtaccaaattagcaggacacc 252  Q
    ||||| |||||| |||||||||||| ||||    
T  9584118 cagactttagtatcaaattagcagggcacc 9584147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 34 - 283
Target Start/End: Original strand, 2392383 - 2392632
Alignment:
Q  34 caaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctccga 132  Q
    ||||||||||||||||||||||||||||||||||||||||| | | ||||||  ||| || ||| || |||||||||  || ||||||||||||||||||    
T  2392383 caaaataaaactcctagaccccaacacccaagctgagccacattttgaagagatcctaaccgaaggatcatgcagctagcacaaacctcgcgacctccga 2392482  T
Q  133 tccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttag 232  Q
    |||||| ||||||||||| |   ||||||||||||||||||| || ||||||| ||||| || |||| ||||||||||||||||| ||||||| |  |||    
T  2392483 tccaccgaaagagcacaacac--aaagcccaaaaaccaacttaagacaaagaactgacttccaatctcgaatcaaaagtgatcggtccaccaggctatag 2392580  T
Q  233 taccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaa 283  Q
    ||||||||||||||| |||| ||||  ||||||  ||||||| |||||||||    
T  2392581 taccaaattagcagggcacccctcgcccccggtacaccagagtaaaaccaaa 2392632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 26 - 257
Target Start/End: Complemental strand, 45164067 - 45163835
Alignment:
Q  26 aacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagct-tccaaaacctcgcg 124  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||| || ||| || ||||||||| ||  |||| ||| |    
T  45164067 aacaccctcaaaataaaactcctagaccccaacacccaagctaagccacatttcgaagagcacctaaccgaaggatcatgcagctatcacaaacttcgtg 45163968  T
Q  125 acctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcc--cac 222  Q
    |||||||||||||| ||||||||||| |   ||||||||||||||||||| || |||| || ||||| | ||||| |||||||||||||||||||  |||    
T  45163967 acctccgatccaccgaaagagcacaaca--caaagcccaaaaaccaacttaagacaaaaaactgacttctgatctcgaatcaaaagtgatcggcccacac 45163870  T
Q  223 cagacgttagtaccaaattagcaggacacctctcg 257  Q
     ||||  |||||||||||||||||| |||| ||||    
T  45163869 aagactatagtaccaaattagcagggcacccctcg 45163835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 23 - 257
Target Start/End: Original strand, 23328216 - 23328449
Alignment:
Q  23 aagaacacc-ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctc 121  Q
    ||||||||| |||||||||||||||| ||||  |||||||||||||||||||| | ||||| ||| ||| || ||||||||| | |||||||| ||||||    
T  23328216 aagaacaccactcaaaataaaactcccagacttcaacacccaagctgagccacat-tcgaaaagctcctaaccgaatgaacaaggagcttccacaacctc 23328314  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
     |||||||||||||||| ||||||||||||| ||||||| |||||||||||||||| |||| |  | ||||||||||| ||||||||||||||||| |||    
T  23328315 tcgacctccgatccaccgaaagagcacaaaa-caaaagctcaaaaaccaacttgagccaaaaagctaactcccgatctcgaatcaaaagtgatcggtcca 23328413  T
Q  222 ccagacgttagtaccaaattagcaggacacctctcg 257  Q
    ||| || |||| ||||||| | |||| |||| ||||    
T  23328414 ccaaactttagaaccaaatcaacagggcacccctcg 23328449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 23 - 227
Target Start/End: Complemental strand, 17551167 - 17550969
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctc 121  Q
    ||||||||||||||||||||||||  |||||||||||||||| ||||||||| | ||||||||||||| ||      | |||||||||  || |||||||    
T  17551167 aagaacaccctcaaaataaaactctcagaccccaacacccaaactgagccacatttcgaagagcacctaacc-----atcatgcagctatcacaaacctc 17551073  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    |||||||||||| || | ||||||||||| |   |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  17551072 gcgacctccgatgcatcgaaagagcacaacac--aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggccca 17550975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 23 - 208
Target Start/End: Complemental strand, 47235913 - 47235729
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagct-tccaaaacctc 121  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| |||| | ||||||||||||| || ||| || ||||||||| ||  |||||||    
T  47235913 aagaacaccctcaaaataaaactcgcagaccccaacacccaagctgaaccacatttcgaagagcacctaaccgaaggatcatgcagctatcacaaacctc 47235814  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaa 208  Q
    |||||||| |||||||| |||||||| ||| || ||||||||||||||||||| ||||||||||  ||||| |||||| ||||||||    
T  47235813 gcgacctctgatccaccgaaagagca-aaacac-aaagcccaaaaaccaacttaagtcaaagaaccgactctcgatctcgaatcaaa 47235729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 23 - 283
Target Start/End: Original strand, 34475622 - 34475880
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctc 121  Q
    ||||||||||| ||||  ||||||  | ||||||||||| |||||||| ||| | ||||||||||||| || ||| || ||| |||||  || |||||||    
T  34475622 aagaacacccttaaaa--aaactctcataccccaacacctaagctgagtcacatttcgaagagcacctaaccgaaggatcatacagctatcacaaacctc 34475719  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    ||||||||| ||||||| ||||||||||| |   |||||||||||| |||||| | || |||| |||||||||||||| |||||||||||||||||||||    
T  34475720 gcgacctccaatccaccgaaagagcacaacac--aaagcccaaaaatcaacttaattccaagatttgactcccgatctcgaatcaaaagtgatcggccca 34475817  T
Q  222 ccagacgttagtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaa 283  Q
    ||||||  ||| | |||||||||||| |||| ||||  ||||||  |||||||||||| ||||    
T  34475818 ccagactatagaaacaaattagcagggcacccctcgcccccggtacaccagagaaaaatcaaa 34475880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 95 - 257
Target Start/End: Complemental strand, 45398939 - 45398778
Alignment:
Q  95 gaatgaacatgcagcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactccc 194  Q
    |||||||||||||||||||| |||||| |||||||||||||| | |||||||| |||| ||||||||||||||||||||| | |||||||  |||||| |    
T  45398939 gaatgaacatgcagcttccacaacctctcgacctccgatccatcgaaagagcataaaa-caaaagcccaaaaaccaacttaaatcaaagagctgactctc 45398841  T
Q  195 gatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaattagcaggacacctctcg 257  Q
    ||||| ||||||||||||||||| ||||||||| |||   |||||| |||||| |||| ||||    
T  45398840 gatctcgaatcaaaagtgatcggtccaccagactttaaatccaaatcagcagggcacccctcg 45398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 23 - 243
Target Start/End: Complemental strand, 31483098 - 31482880
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctc 121  Q
    ||||||||||| |||| |||||||  | ||||||||||| |||||||||||| | ||||||||||||| || ||| || |||||||||  || |||||||    
T  31483098 aagaacacccttaaaa-aaaactctcaaaccccaacacctaagctgagccacatttcgaagagcacctaaccgaaggatcatgcagctatcacaaacctc 31483000  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    ||||||||| ||||||| ||||||||||| |   |||||||||||| |||||| | |  |||| |||| ||||||||| ||||||||||||||| ||||     
T  31482999 gcgacctccaatccaccgaaagagcacaacac--aaagcccaaaaatcaacttaattttaagatttgattcccgatctcgaatcaaaagtgatccgcccg 31482902  T
Q  222 ccagacgttagtaccaaattag 243  Q
    ||||||  ||| ||||||||||    
T  31482901 ccagactatagaaccaaattag 31482880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 34 - 283
Target Start/End: Original strand, 2394147 - 2394379
Alignment:
Q  34 caaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctccga 132  Q
    ||||||||||||||||||||||||||||||||||||||||| | | ||||||  ||| || ||| || |||||||||  || ||||||||||||||||||    
T  2394147 caaaataaaactcctagaccccaacacccaagctgagccacattttgaagagatcctaaccgaaggatcatgcagctagcacaaacctcgcgacctccga 2394246  T
Q  133 tccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttag 232  Q
    |||||| |                   ||||||||||||||| || ||||||| ||||| || |||| ||||||||||||||||| ||||||| |  |||    
T  2394247 tccaccga-------------------cccaaaaaccaacttaagacaaagaactgacttccaatctcgaatcaaaagtgatcggtccaccaggctatag 2394327  T
Q  233 taccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaa 283  Q
    ||||||||||||||| |||| ||||  ||||||  ||||||| |||||||||    
T  2394328 taccaaattagcagggcacccctcgcccccggtacaccagagtaaaaccaaa 2394379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 23 - 192
Target Start/End: Complemental strand, 53248116 - 53247947
Alignment:
Q  23 aagaacaccctcaaaataaaa-ctcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagct-tccaaaacct 120  Q
    |||||||| |||||||||||| |||  |||||||||||||||| ||||||||| | ||||||||||| | || ||| || ||| || || ||  ||||||    
T  53248116 aagaacactctcaaaataaaaactctcagaccccaacacccaaactgagccacatttcgaagagcacataaccgaaggatcatacaactatcacaaacct 53248017  T
Q  121 cgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactc 192  Q
    |||||||||| ||||||| ||||||||| || ||||||  | |||||||||||||| |||||||||||||||    
T  53248016 cgcgacctccaatccaccgaaagagcac-aacacaaaa-tctaaaaaccaacttgaatcaaagaattgactc 53247947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 14755286 - 14755339
Alignment:
Q  179 caaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttag 232  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  14755286 caaagaactgactcccgatcttgaatcaaaagtgatcggcccaccagactttag 14755339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 47945790 - 47945713
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttag 232  Q
    |||||||||||| | |||||||| |||| || ||||||||||||| ||||||||||||||||||||||| ||| ||||    
T  47945790 aaaagcccaaaatcaaacttgagccaaataactgactcccgatctcgaatcaaaagtgatcggcccaccggactttag 47945713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 171
Target Start/End: Complemental strand, 21342735 - 21342603
Alignment:
Q  37 aataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccgatcca 136  Q
    ||||||||||  ||||  |||||||||||  ||||||| | ||||| |||  || || ||||||||| |||||||||| |||||| ||||||| ||||||    
T  21342735 aataaaactctcagacttcaacacccaagtcgagccacat-tcgaaaagcttctaaccgaatgaacaagcagcttccacaacctctcgacctctgatcca 21342637  T
Q  137 ccaaaagagcacaaaaacaaaagcccaaaaaccaa 171  Q
     | ||||||||| |||||||||||| |||||||||    
T  21342636 tcgaaagagcac-aaaacaaaagcctaaaaaccaa 21342603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 106 - 227
Target Start/End: Original strand, 33143899 - 33144018
Alignment:
Q  106 cagcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaa-cttgagtcaaagaattgactcccgatcttgaat 204  Q
    |||||||||  ||||||||||||| |||||||| |||||   || |||   |||||||||||| || |||||  ||||||| ||||||||||||| ||||    
T  33143899 cagcttccaccacctcgcgacctctgatccaccgaaagaaaccataaa---aagcccaaaaactaatcttgatccaaagaactgactcccgatctcgaat 33143995  T
Q  205 caaaagtgatcggcccaccagac 227  Q
    ||||||||||||  |||||||||    
T  33143996 caaaagtgatcgatccaccagac 33144018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 224
Target Start/End: Complemental strand, 37123466 - 37123397
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccacca 224  Q
    |||||||||||| | || ||||  ||||||| |||||||| |||| ||||||||||||||||||||||||    
T  37123466 aaaagcccaaaaccaaatttgatccaaagaactgactcccaatctcgaatcaaaagtgatcggcccacca 37123397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 224
Target Start/End: Original strand, 39021273 - 39021342
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccacca 224  Q
    |||||||||||| |  ||||||  ||||||| |||||||||| || ||||||||||||||||||||||||    
T  39021273 aaaagcccaaaaccagacttgatccaaagaactgactcccgacctcgaatcaaaagtgatcggcccacca 39021342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 1652883 - 1652979
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaattagcaggacac 251  Q
    |||||||||||| | |||||||  ||||||| | ||||| ||||| |||||||||||||||||||||| |||  | || ||||||| || |||||||    
T  1652883 aaaagcccaaaaccaaacttgaaccaaagaactaactcctgatctcgaatcaaaagtgatcggcccacaagagttcaggaccaaatcagaaggacac 1652979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 14879486 - 14879442
Alignment:
Q  188 gactcccgatcttgaatcaaaagtgatcggcccaccagacgttag 232  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||    
T  14879486 gactcccgatctcgaatcaaaagtgatcggcccaccagactttag 14879442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 240
Target Start/End: Complemental strand, 14194009 - 14193939
Alignment:
Q  170 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 240  Q
    |||||||| |||||||  ||||||| |||| ||||||||||||||||| || |||||| |||| |||||||    
T  14194009 aacttgagccaaagaaccgactcccaatctcgaatcaaaagtgatcggtccgccagactttaggaccaaat 14193939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 30127332 - 30127274
Alignment:
Q  170 aacttgagtcaa-agaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    |||||||||||| |||| ||||||||||||| |||||||||| ||||||| ||||||||    
T  30127332 aacttgagtcaagagaactgactcccgatctcgaatcaaaagcgatcggctcaccagac 30127274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 5556639 - 5556582
Alignment:
Q  170 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    |||||||  ||||||| ||||||||||||| |||||||||| ||||| ||||||||||    
T  5556639 aacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcgccccaccagac 5556582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 20710740 - 20710777
Alignment:
Q  190 ctcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    |||||||||| |||||||||||||||||||||||||||    
T  20710740 ctcccgatctcgaatcaaaagtgatcggcccaccagac 20710777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 30352307 - 30352356
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccac 74  Q
    ||||||||||| ||||  ||||||| ||||||||||||||||||||||||||    
T  30352307 aagaacaccctaaaaa--aaactccgagaccccaacacccaagctgagccac 30352356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 2782081 - 2782138
Alignment:
Q  170 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||| ||||||| || || ||||||||||  ||||||||||||||| ||||||||||    
T  2782081 aactttagtcaaaaaactggctcccgatctaaaatcaaaagtgatcgtcccaccagac 2782138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 224
Target Start/End: Original strand, 30935387 - 30935456
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccacca 224  Q
    |||||| ||||| | |||||||  |||| || | |||||||||||||||||||||| |||| ||||||||    
T  30935387 aaaagctcaaaaccaaacttgaaccaaataactaactcccgatcttgaatcaaaagcgatcagcccacca 30935456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 823434 - 823498
Alignment:
Q  157 aagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    ||||||||||   ||||||| | ||| || |||||| |||||| |||||||||||||||||||||    
T  823434 aagcccaaaacaaaacttgaatgaaacaactgactctcgatctcgaatcaaaagtgatcggccca 823498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 24099360 - 24099396
Alignment:
Q  191 tcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||||| | |||||||||||||||||||||||||||    
T  24099360 tcccgatatcgaatcaaaagtgatcggcccaccagac 24099396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 31424304 - 31424248
Alignment:
Q  171 acttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    |||||| |||||| | ||||||||||||| |||||||||| || ||||| |||||||    
T  31424304 acttgaatcaaagcactgactcccgatctcgaatcaaaagcgaccggcctaccagac 31424248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 133; Significance: 6e-69; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 23 - 284
Target Start/End: Complemental strand, 38306476 - 38306215
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctc 121  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||| | || ||| || |||||||||  || |||||||    
T  38306476 aagaacaccctcaaaataaaactcacagaccccaacacccaagctgagccacatatcgaagagcacttaaccgaaggatcatgcagctatcacaaacctc 38306377  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    ||||||||||| ||| | ||||||||||| |   |||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||    
T  38306376 gcgacctccgaaccatcgaaagagcacaacac--aaagcccaaaaaccaacttgagtcaaagaactgactcccaatctcgaatcaaaagtgatcggccca 38306279  T
Q  222 ccagacgttagtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 284  Q
    ||||||  |||||||||||||||||| |||| ||||  ||| ||  ||||||||||||||||||    
T  38306278 ccagactatagtaccaaattagcagggcacccctcgccccctgtacaccagagaaaaaccaaat 38306215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 23 - 281
Target Start/End: Complemental strand, 3867331 - 3867073
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcg 122  Q
    ||||||||||||||||||||||| | | || ||||||||||||||||||||| ||||||||||||||||||  || || ||||||| ||||| |||||||    
T  3867331 aagaacaccctcaaaataaaacttccatactccaacacccaagctgagccacatatcgaagagcacctgaccaaaggatcatgcagtttccataacctcg 3867232  T
Q  123 cgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccac 222  Q
    ||||||| ||||||||  |||||||| ||| |||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||| ||||||    
T  3867231 cgacctctgatccaccgcaagagcac-aaagcaaaagcccaaaaaccaacttgagtcaaagaactgactcccggtctcgaatcaaaagtgatcagcccac 3867133  T
Q  223 cagacgttagtaccaaattagcaggacacctctcggcc-cggtgtaccagagaaaaacca 281  Q
    || |  ||||||||||||||||||| ||||  ||| || ||||  |||||||||||||||    
T  3867132 catattttagtaccaaattagcaggccacccttcgccctcggtacaccagagaaaaacca 3867073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 23 - 285
Target Start/End: Original strand, 5860154 - 5860416
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctc 121  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||| | ||||||||||||| |||||| || |||||||||  || |||||||    
T  5860154 aagaacaccctgaaaataaaactcccagaccccaacacccaagctgagccacatttcgaagagcacctaactgaaggatcatgcagctatcacaaacctc 5860253  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    ||||||||||| ||||| ||||||||||| |   |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||| ||||||    
T  5860254 gcgacctccgaaccaccgaaagagcacaacac--aaagcccaaaaaccaacttgcgtcaaagaattgactcccgatctcgaatcaaaagcgataggccca 5860351  T
Q  222 ccagacgttagtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaatt 285  Q
    || |||  |||||||||||||||||| |||| ||||  ||||||  |  ||||||||||||||||    
T  5860352 ccggactatagtaccaaattagcagggcacccctcgcccccggtacagtagagaaaaaccaaatt 5860416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 23 - 284
Target Start/End: Original strand, 47325751 - 47326012
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagct-tccaaaacctc 121  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||| || ||| || ||| ||||| ||  |||||||    
T  47325751 aagaacaccctcaaaataaaactcccagaccccaacacccaagctgagccacatttcgaagagcacctaaccgaaggatcattcagctatcacaaacctc 47325850  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    ||||||||||||||| | ||||||||||  |   |||||||||||||||||||||||||||||  |||||||||||||  ||||||||| ||||||||||    
T  47325851 gcgacctccgatccatcgaaagagcacagca--caaagcccaaaaaccaacttgagtcaaagagctgactcccgatctcaaatcaaaagcgatcggccca 47325948  T
Q  222 ccagacgttagtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 284  Q
    ||||||  |||||||||||||||| | |||| ||||  ||||||  ||||||||||||||||||    
T  47325949 ccagactatagtaccaaattagcaaggcacccctcgcccccggtacaccagagaaaaaccaaat 47326012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 23 - 277
Target Start/End: Complemental strand, 33435324 - 33435070
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcg 122  Q
    |||||||||||||||| |||||||  ||||| ||||| ||||||||||||||   |||||||||||||||| ||| || |||| ||||| || |||||||    
T  33435324 aagaacaccctcaaaagaaaactctcagacctcaacaaccaagctgagccacaattcgaagagcacctgaccgaaggatcatgtagctttcacaacctcg 33435225  T
Q  123 cgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccac 222  Q
    |||||||||||||||| ||||||||| |||||||| ||||| |||| |||||||| ||||||| ||||||||||||| |||||||||||||||| | |||    
T  33435224 cgacctccgatccaccgaaagagcac-aaaacaaatgcccacaaacgaacttgagacaaagaactgactcccgatctcgaatcaaaagtgatcgtctcac 33435126  T
Q  223 cagacgttagtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaa 277  Q
    ||||| |||||||||||||| |||| |||| ||||  ||||||  |||||||||||    
T  33435125 cagactttagtaccaaattaacagggcacccctcgcccccggtacaccagagaaaa 33435070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 23 - 284
Target Start/End: Original strand, 41089614 - 41089875
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcg 122  Q
    ||||||||||||||||||||||||| |||||| ||||||||   ||||| ||   ||||||||||||| |  |||  | ||||||||||||| |||||||    
T  41089614 aagaacaccctcaaaataaaactcccagaccctaacacccatcttgagctacacttcgaagagcacctcaacgaagaatcatgcagcttccacaacctcg 41089713  T
Q  123 cgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccac 222  Q
    |||||||||||||||| ||||| ||||||| ||||||| |||||||||||||||||||||||  |||||||| |||| ||||||||||||||||| ||||    
T  41089714 cgacctccgatccaccgaaagatcacaaaa-caaaagctcaaaaaccaacttgagtcaaagagctgactcccaatctcgaatcaaaagtgatcggtccac 41089812  T
Q  223 cagacgttagtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 284  Q
    ||||| ||||||||||||||||||  |||| ||||  |||| |  ||||||||||||||||||    
T  41089813 cagactttagtaccaaattagcagagcacccctcgcccccgatacaccagagaaaaaccaaat 41089875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 23 - 284
Target Start/End: Original strand, 3419521 - 3419783
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctc 121  Q
    ||||||||||| ||||||||||||| | ||||||||||||||| | ||||||   |||||| |||||| || ||| || || ||||||  || ||||||     
T  3419521 aagaacacccttaaaataaaactcccaaaccccaacacccaagttaagccacaattcgaagcgcacctaaccgaaggatcaagcagctatcacaaacctt 3419620  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    | |||||| |||||||| |||||||||| ||||||| ||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||| |||||    
T  3419621 gtgacctctgatccaccgaaagagcacagaaacaaa-gcccaaaaaccaacttgagtcaaagagctgactcccgatctcgaatcaaaagtgatcagccca 3419719  T
Q  222 ccagacgttagtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 284  Q
    ||| || |||||||||||||| |||| |||| ||||  |||||| |||||||||||||||||||    
T  3419720 ccacactttagtaccaaattaacagggcacccctcgcccccggtataccagagaaaaaccaaat 3419783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 257
Target Start/End: Complemental strand, 37795204 - 37794971
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctc 121  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||||||||   ||||||||||||| || ||| || |||||||||  || |||||||    
T  37795204 aagaacaccctcaaaataaaactctcaaaccccaacacccaagctgagccacagttcgaagagcacctaaccgaaggatcatgcagctatcacaaacctc 37795105  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    ||||||||||| ||||| ||||||||||| |   ||||||||||||||||||||| |||||||| ||||||||||||| ||||||||| ||| |||||||    
T  37795104 gcgacctccgaaccaccgaaagagcacaacac--aaagcccaaaaaccaacttgactcaaagaactgactcccgatctcgaatcaaaactgaacggccca 37795007  T
Q  222 ccagacgttagtaccaaattagcaggacacctctcg 257  Q
    ||| ||  || ||||||||||||||| |||| ||||    
T  37795006 ccatactatattaccaaattagcagggcacccctcg 37794971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 30 - 247
Target Start/End: Complemental strand, 34390169 - 34389954
Alignment:
Q  30 ccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctc 129  Q
    |||||||||||||||||| ||||  ||||||||||| |||||||| | | ||| ||| ||| |  |||||||||||||||||||| |||||| |||||||    
T  34390169 ccctcaaaataaaactcccagactacaacacccaagttgagccacattt-gaaaagctcctaatcgaatgaacatgcagcttccacaacctctcgacctc 34390071  T
Q  130 cgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgt 229  Q
    ||||||||| |||||||||||||  |||||||||||||||||||| || ||||||  ||||||||||||| ||||||||||||||||||||||||||| |    
T  34390070 cgatccaccgaaagagcacaaaat-aaaagcccaaaaaccaacttaagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactt 34389972  T
Q  230 tagtaccaaattagcagg 247  Q
    ||  ||||||| ||||||    
T  34389971 taaaaccaaatcagcagg 34389954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 23 - 257
Target Start/End: Original strand, 35745688 - 35745926
Alignment:
Q  23 aagaacacc-ctcaaaataaaactcctagaccccaacacccaagctgagccacc---tatcgaagagcacctgactgaatgaacatgcagcttccaaaac 118  Q
    ||||||||| |||||||||||||    ||||  ||||||||||||||||||||    ||||||| ||| ||| || |||||||||||||||||||| |||    
T  35745688 aagaacacctctcaaaataaaacagtcagacttcaacacccaagctgagccactatatatcgaaaagctcctaaccgaatgaacatgcagcttccacaac 35745787  T
Q  119 ctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggc 218  Q
    ||| | |||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||  ||||| ||||||| ||||||||||||||| ||    
T  35745788 ctctccacctccaatccaccgaaagagcacaaaaacaaaagcccaaaaaccaacttgagccaaagagatgacttccgatctcgaatcaaaagtgatcagc 35745887  T
Q  219 ccaccagacgttagtaccaaattagcaggacacctctcg 257  Q
    ||| ||||| |||| || ||||||| ||| |||| ||||    
T  35745888 ccatcagactttagaacaaaattagtagggcacccctcg 35745926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 23 - 284
Target Start/End: Complemental strand, 10244397 - 10244136
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctc 121  Q
    |||| ||||||| || ||||| ||| |||||| |||||||||||||||||||   || |||||||||| || ||| || |||||| ||  || |||||||    
T  10244397 aagaccaccctccaactaaaaatcccagacccaaacacccaagctgagccacaattcaaagagcacctaaccgaaggatcatgcaactatcacaaacctc 10244298  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    ||||||||||| ||||  ||||||||||| |   |||| |||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  10244297 gcgacctccgaaccactgaaagagcacaacac--aaaggccaaaaactaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggccca 10244200  T
Q  222 ccagacgttagtaccaaattagcaggacacctctc-ggcccggtgtaccagagaaaaaccaaat 284  Q
    |||||   ||| |||||||||||||| |||| |||   ||||||  ||||||||||||||||||    
T  10244199 ccagattatagcaccaaattagcagggcacccctctcccccggtacaccagagaaaaaccaaat 10244136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 23 - 217
Target Start/End: Original strand, 44353429 - 44353623
Alignment:
Q  23 aagaacaccctcaaaa-taaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacct 120  Q
    |||||||||||||||| ||||||||| |||||||||||||||||| | | ||| | ||||||||||||| || ||| || |||||||||  || ||||||    
T  44353429 aagaacaccctcaaaaataaaactcccagaccccaacacccaagccgggtcacatttcgaagagcacctaaccgaaggatcatgcagctatcacaaacct 44353528  T
Q  121 cgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcgg 217  Q
    |||||||||||||||||| ||||||||||| |   ||||||||||||||||| | |||||||||| |||||||||||||  ||||||||||||||||    
T  44353529 cgcgacctccgatccaccgaaagagcacaacac--aaagcccaaaaaccaacataagtcaaagaactgactcccgatctcaaatcaaaagtgatcgg 44353623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 101 - 257
Target Start/End: Complemental strand, 6585046 - 6584891
Alignment:
Q  101 acatgcagcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatctt 200  Q
    |||||||| ||||| |||||| | |||||||||||||| ||||||||||||| ||||||||||||||||||||| || ||||||  |||||||||||||     
T  6585046 acatgcaggttccacaacctctcaacctccgatccaccgaaagagcacaaaa-caaaagcccaaaaaccaacttaagccaaagagctgactcccgatctc 6584948  T
Q  201 gaatcaaaagtgatcggcccaccagacgttagtaccaaattagcaggacacctctcg 257  Q
    ||||||||||||||||||||||||||| |||| ||||||| |||||| |||| ||||    
T  6584947 gaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcacccctcg 6584891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 96 - 215
Target Start/End: Original strand, 48161964 - 48162083
Alignment:
Q  96 aatgaacatgcagcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccg 195  Q
    |||||||| ||| |||||| |||||| ||||||| ||||||||||||||||||||||||||||| ||||||| ||| ||||| ||||||| ||| | |||    
T  48161964 aatgaacaagcaacttccacaacctctcgacctctgatccaccaaaagagcacaaaaacaaaagtccaaaaatcaatttgagccaaagaactgatttccg 48162063  T
Q  196 atcttgaatcaaaagtgatc 215  Q
    |||| ||||||||| |||||    
T  48162064 atctcgaatcaaaaatgatc 48162083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 40 - 283
Target Start/End: Complemental strand, 25161011 - 25160770
Alignment:
Q  40 aaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctccgatccacc 138  Q
    |||||||  ||||||||||| | ||| |||||||| | || |||||||||| |||||| || ||  |||||  || |||||| | ||||||| |||||||    
T  25161011 aaaactctcagaccccaacatctaagttgagccacatttccaagagcacctaactgaaggatcacacagctatcacaaaccttgagacctccaatccacc 25160912  T
Q  139 aaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaa 238  Q
     ||||||||||| |     ||||||||||||||||| | |  |||| |||||| ||||||| ||||||||||| ||||| |||||||||  ||| |||||    
T  25160911 gaaagagcacaacac----agcccaaaaaccaacttaatttcaagatttgacttccgatctcgaatcaaaagtaatcggtccaccagactatagaaccaa 25160816  T
Q  239 attagcaggacacctctcggcc-cggtgtaccagagaaaaaccaaa 283  Q
    ||||||||| |||| |||| || ||||  |||||||||||||||||    
T  25160815 attagcagggcacccctcgccctcggtacaccagagaaaaaccaaa 25160770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 30 - 281
Target Start/End: Complemental strand, 8745358 - 8745110
Alignment:
Q  30 ccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctc 129  Q
    |||||||||| ||||||| || |   |||||| |||||||||||| |  |||| ||| |||  ||||| || ||||||||||||| |||||| |||||||    
T  8745358 ccctcaaaattaaactcccagtcttgaacaccaaagctgagccacatc-cgaaaagctcctatctgaaagatcatgcagcttccacaacctctcgacctc 8745260  T
Q  130 cgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgt 229  Q
    ||||||||| |||||   || |||   |||||||||| | |||||||  ||| ||| ||| ||||||||| ||||||||||||||||||||||||||  |    
T  8745259 cgatccaccgaaagaaaccataaa---aagcccaaaaccaaacttgatccaacgaactgaatcccgatctcgaatcaaaagtgatcggcccaccagaatt 8745163  T
Q  230 tagtaccaaattagcaggacacctctcggcc-cggtgtaccagagaaaaacca 281  Q
    ||| ||||||| || ||| |||| |||  || ||||| |||||||||| ||||    
T  8745162 taggaccaaatcagaaggccacccctcaccctcggtgcaccagagaaacacca 8745110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 31972000 - 31972089
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttc 112  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||||| | ||||||||||||| || ||| || |||||| ||||    
T  31972000 aagaacaccctccaaataaaactcccagaccccaacacccaagctgagccacatttcgaagagcacctaaccgaaggatcatgcaccttc 31972089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 9349832 - 9349761
Alignment:
Q  156 aaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||||||||| | |||||||  |  |||||||||||||||||| |||||||||||||||||||||||||||    
T  9349832 aaagcccaaaatcaaacttgaacctgagaattgactcccgatctcgaatcaaaagtgatcggcccaccagac 9349761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 170 - 240
Target Start/End: Complemental strand, 1320863 - 1320793
Alignment:
Q  170 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 240  Q
    |||||||| ||||||| ||||| ||||| ||||||||||||||||||||||||||||| |||  |||||||    
T  1320863 aacttgagccaaagaactgacttccgattttgaatcaaaagtgatcggcccaccagactttatgaccaaat 1320793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 24324810 - 24324864
Alignment:
Q  170 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccacca 224  Q
    |||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||    
T  24324810 aacttgagccaaagaattgactcccgatctcgaatcaaaattgatcggcccacca 24324864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 42533264 - 42533334
Alignment:
Q  170 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 240  Q
    ||||| || ||||| ||||||||||||||| ||||||||||||||| ||||||||||| |||| |||||||    
T  42533264 aacttaagccaaaggattgactcccgatctcgaatcaaaagtgatcagcccaccagactttaggaccaaat 42533334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 6716748 - 6716805
Alignment:
Q  170 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    |||||||| ||||||| ||||||||||||| ||||||||||||||||||| |||||||    
T  6716748 aacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcggccaaccagac 6716805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 13311908 - 13311851
Alignment:
Q  170 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    |||||||  ||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  13311908 aacttgaaccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac 13311851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 117 - 239
Target Start/End: Complemental strand, 3478471 - 3478352
Alignment:
Q  117 acctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcg 216  Q
    ||||| ||| |||||||||||| ||||| ||| || |   ||||||||||   | |||||| ||||||| | ||||||||||| ||||||||||||||||    
T  3478471 acctctcgatctccgatccaccgaaagaacaccaaca---aagcccaaaactaatcttgagccaaagaactaactcccgatctcgaatcaaaagtgatcg 3478375  T
Q  217 gcccaccagacgttagtaccaaa 239  Q
    |||||||| || |||| ||||||    
T  3478374 gcccaccaaactttaggaccaaa 3478352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 224
Target Start/End: Complemental strand, 12480970 - 12480901
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccacca 224  Q
    ||||||| |||| | |||||||  ||||||| ||||||||||||| |||||||||| |||||||||||||    
T  12480970 aaaagccaaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcggcccacca 12480901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 187 - 227
Target Start/End: Complemental strand, 38485608 - 38485568
Alignment:
Q  187 tgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  38485608 tgactcccgatctcgaatcaaaagtgatcggcccaccagac 38485568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 16828948 - 16829018
Alignment:
Q  170 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 240  Q
    |||||||||||||||| |||||  |||||| ||| ||||||||||| ||| ||||||| |||| |||||||    
T  16828948 aacttgagtcaaagaactgactttcgatctcgaaacaaaagtgatcagccaaccagactttaggaccaaat 16829018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 240
Target Start/End: Complemental strand, 16954722 - 16954652
Alignment:
Q  170 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 240  Q
    |||||||||||||||| |||||  |||||| ||| ||||||||||||| | ||||||| |||| |||||||    
T  16954722 aacttgagtcaaagaactgactttcgatctcgaaacaaaagtgatcggtcaaccagactttaggaccaaat 16954652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 23983285 - 23983207
Alignment:
Q  149 aaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||| |||| ||||||| | ||||||||  || ||||||||||||||||| |||||||||  ||||| ||||||||||    
T  23983285 aaaaaaaaaaacccaaaaccaaacttgagctaaggaattgactcccgatctcgaatcaaaaacgatcgacccaccagac 23983207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 284
Target Start/End: Complemental strand, 44755663 - 44755581
Alignment:
Q  202 aatcaaaagtgatcggcccaccagacgttagtaccaaattagcaggacacctctcggcccggtgtaccagagaaaaaccaaat 284  Q
    |||||||||||||||||||||||||| |||| ||||||| || ||| |||| |||  | ||||  |||||||||| |||||||    
T  44755663 aatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccctcaccacggtacaccagagaaacaccaaat 44755581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 46133274 - 46133360
Alignment:
Q  155 aaaagcccaaaaaccaa-cttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 240  Q
    ||||||||||||||||| |||||  || |||| |||||||||||||  ||||||||| ||||||| |||||||| | || |||||||    
T  46133274 aaaagcccaaaaaccaaacttgaaccagagaactgactcccgatctcaaatcaaaagcgatcggctcaccagacttcagcaccaaat 46133360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 46262151 - 46262188
Alignment:
Q  190 ctcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    |||||||||| |||||||||||||||||||||||||||    
T  46262151 ctcccgatctcgaatcaaaagtgatcggcccaccagac 46262188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 6585089 - 6585045
Alignment:
Q  30 ccctcaaaataaaactcctagaccccaacacccaagctgagccac 74  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||    
T  6585089 ccctcaaaataaaactcccagacttcaacacccaagctgagccac 6585045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 17802851 - 17802885
Alignment:
Q  193 ccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  17802851 ccgatctcgaatcaaaagtgatcggcccaccagac 17802885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 11379139 - 11379196
Alignment:
Q  170 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    |||||||  ||||| | ||||||||||||| |||||||||| ||||||| ||||||||    
T  11379139 aacttgaaccaaagtactgactcccgatctcgaatcaaaagcgatcggctcaccagac 11379196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 27993568 - 27993605
Alignment:
Q  190 ctcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    |||||||||| ||||||||||||||||| |||||||||    
T  27993568 ctcccgatctcgaatcaaaagtgatcggtccaccagac 27993605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 35206725 - 35206762
Alignment:
Q  190 ctcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    |||||||||| | |||||||||||||||||||||||||    
T  35206725 ctcccgatctcggatcaaaagtgatcggcccaccagac 35206762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 3419265 - 3419313
Alignment:
Q  26 aacaccctcaaaataaaactcctagaccccaacacccaagctgagccac 74  Q
    |||||||| ||||||||||||| | ||||||||||||||| | ||||||    
T  3419265 aacacccttaaaataaaactcccaaaccccaacacccaagttaagccac 3419313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 133; Significance: 6e-69; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 23 - 284
Target Start/End: Complemental strand, 8255242 - 8254981
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctc 121  Q
    ||||||||||||||||||||||||  |||||| ||||||||||||||||||| |  |||||||||||| |||||  || || ||||||  || |||||||    
T  8255242 aagaacaccctcaaaataaaactcacagaccctaacacccaagctgagccacattacgaagagcacctaactgatggatcaagcagctatcacaaacctc 8255143  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    ||||||||||||||||| |||||||||||||   |||||||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||||||||    
T  8255142 gcgacctccgatccaccgaaagagcacaaaac--aaagcccaaaaaccaacttgagtcaaagaactgacttctgatctcggatcaaaagtgatcggccca 8255045  T
Q  222 ccagacgttagtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 284  Q
    |||||| ||||||||||||||||||| |||| ||||  ||||||  ||||||||||||||||||    
T  8255044 ccagactttagtaccaaattagcagggcacccctcgcccccggtacaccagagaaaaaccaaat 8254981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 23 - 284
Target Start/End: Complemental strand, 8268660 - 8268399
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctc 121  Q
    ||||||||||||||||||||||||  |||||| ||||||||||||||||||| |  |||||||||||| |||||  || || ||||||  || |||||||    
T  8268660 aagaacaccctcaaaataaaactcacagaccctaacacccaagctgagccacattacgaagagcacctaactgatggatcaagcagctatcacaaacctc 8268561  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    ||||||||||||||||| |||||||||||||   |||||||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||||||||    
T  8268560 gcgacctccgatccaccgaaagagcacaaaac--aaagcccaaaaaccaacttgagtcaaagaactgacttctgatctcggatcaaaagtgatcggccca 8268463  T
Q  222 ccagacgttagtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 284  Q
    |||||| ||||||||||||||||||| |||| ||||  ||||||  ||||||||||||||||||    
T  8268462 ccagactttagtaccaaattagcagggcacccctcgcccccggtacaccagagaaaaaccaaat 8268399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 23 - 284
Target Start/End: Complemental strand, 30964652 - 30964395
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctc 121  Q
    ||||||||||||||||||||||||| ||  ||    |||||||| | ||||| | ||||||||||||| || |||||| |||||||||  || |||||||    
T  30964652 aagaacaccctcaaaataaaactcccagtacc----acccaagcagggccacatttcgaagagcacctaaccgaatgatcatgcagctatcacaaacctc 30964557  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    ||||||||||| ||||||||||||||||| | ||||| ||||||||||||||||||||||||||  |||||||||||  |||||||||||||||||||||    
T  30964556 gcgacctccgaaccaccaaaagagcacaaca-caaaa-cccaaaaaccaacttgagtcaaagaacggactcccgatcacgaatcaaaagtgatcggccca 30964459  T
Q  222 ccagacgttagtaccaaattagcaggacacctctcggcc-cggtgtaccagagaaaaaccaaat 284  Q
     ||||   |||||||||||||||||| |||| |||| || ||||  ||||||||||||||||||    
T  30964458 tcagattatagtaccaaattagcagggcacccctcgccctcggtacaccagagaaaaaccaaat 30964395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 30 - 257
Target Start/End: Original strand, 31050535 - 31050761
Alignment:
Q  30 ccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctc 129  Q
    |||||||||||||||  | ||||  ||||||||||||| ||||||  |||||| ||| ||| || |||||||||||||||||||| |||||| |||||||    
T  31050535 ccctcaaaataaaacagccagacttcaacacccaagcttagccaca-atcgaaaagctcctaaccgaatgaacatgcagcttccacaacctctcgacctc 31050633  T
Q  130 cgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgt 229  Q
    ||||||||  ||||||||||||||||||||||||||||||||||  |  ||||||  | ||| ||||||| ||||||||||||||||||||||||||| |    
T  31050634 cgatccactgaaagagcacaaaaacaaaagcccaaaaaccaactcaaaccaaagacctaacttccgatctcgaatcaaaagtgatcggcccaccagactt 31050733  T
Q  230 tagtaccaaattagcaggacacctctcg 257  Q
    ||| ||||||| || ||| |||| ||||    
T  31050734 tagaaccaaatcagtagggcacccctcg 31050761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 30 - 246
Target Start/End: Complemental strand, 2825990 - 2825776
Alignment:
Q  30 ccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctc 129  Q
    |||||||||||||||||| | ||  |||||||||| |||| |||||| ||||| ||| ||| || |||||||||||||||||||| ||||||  ||||||    
T  2825990 ccctcaaaataaaactcccaaacttcaacacccaaactgaaccacct-tcgaaaagctcctaaccgaatgaacatgcagcttccacaacctctagacctc 2825892  T
Q  130 cgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgt 229  Q
    ||||||||| |||||| ||||||  ||||||||||||||||  ||||| ||||||  ||| ||||||||| ||||||||| ||||||||||||| ||| |    
T  2825891 cgatccaccgaaagagtacaaaat-aaaagcccaaaaaccacattgagccaaagaggtgattcccgatctcgaatcaaaaatgatcggcccaccggactt 2825793  T
Q  230 tagtaccaaattagcag 246  Q
    ||| ||||||| |||||    
T  2825792 tagaaccaaatcagcag 2825776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 23 - 284
Target Start/End: Complemental strand, 4305939 - 4305679
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctc 121  Q
    |||| |||||| ||||||||||||| | |||| || ||||||| |||||||| | ||||||||||||| || ||| || ||||||| |  || ||||||     
T  4305939 aagatcaccctgaaaataaaactcccaaacccaaatacccaagttgagccacat-tcgaagagcacctcaccgaaggatcatgcagttatcacaaacctt 4305841  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    |||||||| |  ||||||||||||||||| |   |||||| ||||||||||||||| ||||||| | ||||||||||| |||||||||||||||| ||||    
T  4305840 gcgacctctggaccaccaaaagagcacaacac--aaagcctaaaaaccaacttgagacaaagaactaactcccgatctcgaatcaaaagtgatcgcccca 4305743  T
Q  222 ccagacgttagtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 284  Q
    ||||||  |||||||||||||||||| |||| || |  ||||||  ||||||||||||| ||||    
T  4305742 ccagactatagtaccaaattagcagggcaccgcttgcccccggtacaccagagaaaaacgaaat 4305679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 23 - 222
Target Start/End: Original strand, 30167430 - 30167628
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctc 121  Q
    ||||||||||||||||||||||||| | ||||||||||||||| || ||||| | ||||||||| | | || ||| |  |||||||||  || |||||||    
T  30167430 aagaacaccctcaaaataaaactcccataccccaacacccaagttgggccacatttcgaagagcgcttaaccgaagggtcatgcagctatcataaacctc 30167529  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    ||||||||||  ||||| ||||||||||| |   ||| |||||||| |||||||||||||||||  |||||||||||| |||||||||||||||| ||||    
T  30167530 gcgacctccggaccaccgaaagagcacaacac--aaaccccaaaaatcaacttgagtcaaagaaccgactcccgatctcgaatcaaaagtgatcgaccca 30167627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 30 - 211
Target Start/End: Original strand, 35341213 - 35341391
Alignment:
Q  30 ccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctc 129  Q
    |||||||||||||||||| | ||  ||||||| || ||||||||| | ||||| ||| | | ||||||||||||||||||||||| |||||| ||| |||    
T  35341213 ccctcaaaataaaactcccaaacttcaacaccaaa-ctgagccacat-tcgaaaagctcataactgaatgaacatgcagcttccacaacctctcgaactc 35341310  T
Q  130 cgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagt 211  Q
    ||||||||| ||||||||| |||||||||| ||||||||||||||||| ||||||  ||||| ||||||| | |||||||||    
T  35341311 cgatccaccgaaagagcac-aaaacaaaaggccaaaaaccaacttgagccaaagagctgacttccgatctcggatcaaaagt 35341391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 123 - 240
Target Start/End: Complemental strand, 25753285 - 25753171
Alignment:
Q  123 cgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccac 222  Q
    |||||||||||||||| |||||  |||| ||  ||||||||||| | |||||||| ||||||| ||||||||||||| |||||||||||||||| |||||    
T  25753285 cgacctccgatccaccgaaagaa-acaataa--aaagcccaaaatcaaacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcgccccac 25753189  T
Q  223 cagacgttagtaccaaat 240  Q
    ||||| |||| |||||||    
T  25753188 cagactttaggaccaaat 25753171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 38637171 - 38637301
Alignment:
Q  93 ctgaatgaacatgcagcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactc 192  Q
    ||||| || ||| |||||||||  ||||| ||||||||||||||||||||||   || |||   |||||||||| || |||| || ||||||||||||||    
T  38637171 ctgaaagatcattcagcttccaccacctctcgacctccgatccaccaaaagaaaccataaa---aagcccaaaa-cctacttaagccaaagaattgactc 38637266  T
Q  193 ccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||||| |||||||||||||||||||| ||||||    
T  38637267 ccgatctcgaatcaaaagtgatcggcccgccagac 38637301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 8706010 - 8706061
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccac 74  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8706010 aagaacaccctcaaaataaaactcttagaccccaacacccaagctgagccac 8706061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 22811157 - 22811242
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 240  Q
    ||||||| |||| | |||||||| ||||||| ||||||||||||| |||| |||| ||||||||||||||||| |||  |||||||    
T  22811157 aaaagcctaaaaccaaacttgagccaaagaactgactcccgatctcgaataaaaaatgatcggcccaccagactttaagaccaaat 22811242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 40813797 - 40813850
Alignment:
Q  174 tgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||||||| ||||| |||||||||| |||||||||||||||||||||||||||    
T  40813797 tgagtcaaaaaattggctcccgatctcgaatcaaaagtgatcggcccaccagac 40813850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 53823418 - 53823503
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 240  Q
    |||| ||||||| | |||||||| ||||||| ||||||||||||| |||||||||||||| || ||||||||| |||  |||||||    
T  53823418 aaaaacccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaagtgattggtccaccagactttatgaccaaat 53823503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 38929911 - 38929839
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    |||||||||||| | |||||||| ||||||| ||||||  ||||| ||||||||||||||||||||| |||||    
T  38929911 aaaagcccaaaatcaaacttgagccaaagaactgactcttgatctcgaatcaaaagtgatcggcccagcagac 38929839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 183 - 225
Target Start/End: Original strand, 39421038 - 39421080
Alignment:
Q  183 gaattgactcccgatcttgaatcaaaagtgatcggcccaccag 225  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  39421038 gaattgactcccgatctcgaatcaaaagtgatcggcccaccag 39421080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 36962626 - 36962684
Alignment:
Q  168 ccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||||||||||||||| | |||||| ||||| ||||||||||| |||||||||||||||    
T  36962626 ccaacttgagtcaaagact-gactcctgatctcgaatcaaaagtaatcggcccaccagac 36962684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 227
Target Start/End: Original strand, 39041285 - 39041343
Alignment:
Q  169 caacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||||||||| |  || ||||||| ||||| |||||||||||||||||||||||||||    
T  39041285 caacttgagtctagaaactgactcctgatctcgaatcaaaagtgatcggcccaccagac 39041343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 46698784 - 46698854
Alignment:
Q  158 agcccaaaaaccaa-cttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||||||||| || |||||  ||||||| ||||||||||||| ||||||||||  |||||||||||||||    
T  46698784 agcccaaaaacaaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcaatcggcccaccagac 46698854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 6599957 - 6600014
Alignment:
Q  170 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||||| ||||||||  ||||||||||||  ||||||||| ||||||||||||||||    
T  6599957 aacttgaatcaaagaaccgactcccgatctctaatcaaaagcgatcggcccaccagac 6600014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 155 - 224
Target Start/End: Complemental strand, 16501815 - 16501746
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccacca 224  Q
    |||||||||||| | |||| ||  ||||||  ||||||||||||| |||||||||| |||||||||||||    
T  16501815 aaaagcccaaaaccaaactagaaccaaagagctgactcccgatctcgaatcaaaagcgatcggcccacca 16501746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 21387216 - 21387273
Alignment:
Q  170 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||||| || ||||| ||||| ||||||| ||||||||||||||||| |||||||||    
T  21387216 aacttgaatcgaagaactgacttccgatctcgaatcaaaagtgatcggtccaccagac 21387273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 35800573 - 35800488
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 240  Q
    |||||||||||| | |||| || |||||||| ||||| ||||||| |||||||||| ||||||  |||||||| | || |||||||    
T  35800573 aaaagcccaaaaccaaactggaatcaaagaactgacttccgatctcgaatcaaaagcgatcggttcaccagacttcagaaccaaat 35800488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 49747611 - 49747526
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 240  Q
    |||||| ||||| | |||||||   |||||| |||||| ||||||  ||||||||||||||||| |||||||| |||| |||||||    
T  49747611 aaaagctcaaaaccaaacttgatcaaaagaactgactctcgatctcaaatcaaaagtgatcggctcaccagactttagaaccaaat 49747526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 28966951 - 28966879
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    |||||||||||| | |||||||| ||||||| |||||||| |||| |||||||||  ||||| || |||||||    
T  28966951 aaaagcccaaaaccaaacttgagccaaagaactgactcccaatctcgaatcaaaaacgatcgccctaccagac 28966879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 2061734 - 2061812
Alignment:
Q  154 caaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttag 232  Q
    ||||||||||||| | ||  |||  ||||||| |||||| | |||| ||||||||||||||| ||||||||||| ||||    
T  2061734 caaaagcccaaaatcaaaactgatccaaagaactgactctcaatctcgaatcaaaagtgatcagcccaccagactttag 2061812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 53756802 - 53756768
Alignment:
Q  193 ccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  53756802 ccgatctcgaatcaaaagtgatcggcccaccagac 53756768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 2792286 - 2792335
Alignment:
Q  170 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcc 219  Q
    ||||||||||||  || ||||| ||||||| |||||||||||||||||||    
T  2792286 aacttgagtcaagaaactgacttccgatctcgaatcaaaagtgatcggcc 2792335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 24740103 - 24740172
Alignment:
Q  158 agcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||||||| | || ||||  |||| || |||||||||||||||||| | ||| ||||||||||||||||    
T  24740103 agcccaaaaccaaatttgaaccaaataactgactcccgatcttgaattataagcgatcggcccaccagac 24740172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 227
Target Start/End: Original strand, 37707392 - 37707424
Alignment:
Q  195 gatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||| |||||||||||||||||||||||||||    
T  37707392 gatctcgaatcaaaagtgatcggcccaccagac 37707424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 41117964 - 41118024
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatc 215  Q
    |||||||||||| | || ||||| ||||||| | ||| ||||||| |||||||||||||||    
T  41117964 aaaagcccaaaacctaatttgagccaaagaacttacttccgatctcgaatcaaaagtgatc 41118024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 130; Significance: 4e-67; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 23 - 284
Target Start/End: Original strand, 24995260 - 24995522
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagacccc-aacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacct 120  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||  | ||||||||||||| || ||| || |||||||||  || ||||||    
T  24995260 aagaacaccctcaaaataaaactcctagacccccaacacccaagctgagccatatttcgaagagcacctaaccgaaggatcatgcagctatcacaaacct 24995359  T
Q  121 cgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccc 220  Q
    ||||||||| || ||||  ||||||||||| |   |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  24995360 cgcgacctctgacccactgaaagagcacaacac--aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggccc 24995457  T
Q  221 accagacgttagtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 284  Q
    |||||||  |||||||||||||||| |||||| ||||  ||| ||  ||||||||||||||||||    
T  24995458 accagactatagtaccaaattagcaagacacccctcgcccccagtacaccagagaaaaaccaaat 24995522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 23 - 284
Target Start/End: Original strand, 31207228 - 31207488
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctc 121  Q
    ||||||||||||||||||||||||| | || ||||||||||||||||||||| | ||||||||||||| || ||| |  ||| |||||  || |||||||    
T  31207228 aagaacaccctcaaaataaaactcccatactccaacacccaagctgagccacatttcgaagagcacctaaccgaagggtcattcagctatcacaaacctc 31207327  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    ||||||||||||||||| ||| ||||||| |   ||| ||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  31207328 gcgacctccgatccaccgaaaaagcacaacac--aaatcccaaaatccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggccca 31207425  T
Q  222 ccagacgttagtaccaaattagcaggacacctctcggccc-ggtgtaccagagaaaaaccaaat 284  Q
    ||||||  |||||||||||||||||| |||| |||| ||| |||  ||||||||||||||||||    
T  31207426 ccagactatagtaccaaattagcagggcacc-ctcgcccctggtacaccagagaaaaaccaaat 31207488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 23 - 284
Target Start/End: Complemental strand, 9519715 - 9519453
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagacccc-aacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacct 120  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||||||||||  | ||||||||||||| || |||||| |||||||||  || |||| |    
T  9519715 aagaacaccctcaaaataaaactctcagacccccaacacccaagctgagccatatttcgaagagcacctaaccgaatgatcatgcagctatcacaaactt 9519616  T
Q  121 cgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccc 220  Q
    ||| |||||||| ||||| ||||||||||| |   |||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||    
T  9519615 cgcaacctccgacccaccgaaagagcacaacac--aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaactgatcggccc 9519518  T
Q  221 accagacgttagtaccaaattagcaggacacctctc-ggcccggtgtaccagagaaaaaccaaat 284  Q
    || ||||  |||||||||||||||||| |||| |||   ||||||  ||||||||||||||||||    
T  9519517 actagactatagtaccaaattagcagggcacccctcacccccggtacaccagagaaaaaccaaat 9519453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 28 - 284
Target Start/End: Complemental strand, 36631047 - 36630791
Alignment:
Q  28 caccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacc 127  Q
    ||||| |||| |||||| |  ||||||| ||| ||||| |||||||| | |||||||||||||||| ||| || ||||||||| ||| ||||||||||||    
T  36631047 cacccccaaactaaaacacgcagacccccacatccaagttgagccacatttcgaagagcacctgaccgaaggatcatgcagctcccacaacctcgcgacc 36630948  T
Q  128 tccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||||||| | ||||||||||||| ||||||||||||||| |||| ||||||||||| |||| |||||||| |||| ||||||||||||||||||||||    
T  36630947 tccgatccatcgaaagagcacaaaa-caaaagcccaaaaacaaactagagtcaaagaactgacacccgatctcgaattaaaagtgatcggcccaccagac 36630849  T
Q  228 gttagtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 284  Q
     |||| |||||||||||||| |||| ||||  ||||||  |||| |||||||||||||    
T  36630848 tttagaaccaaattagcagggcacccctcgcccccggtacaccaaagaaaaaccaaat 36630791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 23 - 284
Target Start/End: Original strand, 37986724 - 37986985
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctc 121  Q
    |||||||||||| |||||||||||| |||||  ||||||||||||||||||| | ||||||||||||| || ||| || || ||||||  || |||||||    
T  37986724 aagaacaccctccaaataaaactcccagaccgaaacacccaagctgagccacatttcgaagagcacctaaccgaaggatcaggcagctatcacaaacctc 37986823  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    ||||||||||| ||||| ||||||||||| |   ||||| |||||||||||||||||||||||| ||||||||||||| ||||||||| |||| ||||||    
T  37986824 gcgacctccgaaccaccgaaagagcacaacac--aaagcacaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaaatgattggccca 37986921  T
Q  222 ccagacgttagtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 284  Q
    ||||||  ||  |||||||||||||| |||| ||||  ||||||  ||||||||||||||||||    
T  37986922 ccagactataacaccaaattagcagggcacccctcgcccccggtacaccagagaaaaaccaaat 37986985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 284
Target Start/End: Original strand, 32066161 - 32066422
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctc 121  Q
    |||||||||||| |||||||||||  ||||||||||||||||||||| |||| | || ||||||| || || |||||| |||||||||  || |||||||    
T  32066161 aagaacaccctccaaataaaactctcagaccccaacacccaagctgaaccacatttcaaagagcatctaaccgaatgatcatgcagctatcacaaacctc 32066260  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    || ||||| || ||||| ||||||||||| |   |||||||||||||||||| ||||||||||  ||||||||||| | |||||||||||||||||||||    
T  32066261 gcaacctctgaaccaccgaaagagcacaacac--aaagcccaaaaaccaactggagtcaaagagctgactcccgatttcgaatcaaaagtgatcggccca 32066358  T
Q  222 ccagacgttagtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 284  Q
    ||||||  ||| |||||||||||||| |||| ||||  ||||||  || |||||||||||||||    
T  32066359 ccagactatagcaccaaattagcagggcacccctcgcccccggtacactagagaaaaaccaaat 32066422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 23 - 284
Target Start/End: Original strand, 34388872 - 34389132
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctc 121  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||||||| |   ||||| ||||| |||||| || ||   ||||  || |||||||    
T  34388872 aagaacaccctcaaaataaaactctcataccccaacacccaagctgagccacatgatgaagaacacctaactgaaggatcact-agctatcacaaacctc 34388970  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
     |||||| ||||||||| ||| ||||||| |   |||||||||||||||||||||||||||||| ||||||  ||||| |||||||||||||||||||||    
T  34388971 acgacctacgatccaccgaaatagcacaacac--aaagcccaaaaaccaacttgagtcaaagaactgactcttgatctcgaatcaaaagtgatcggccca 34389068  T
Q  222 ccagacgttagtaccaaattagcaggacacctctcggccc-ggtgtaccagagaaaaaccaaat 284  Q
    ||||||  |||||||||||||||||| |||| |||| ||| |||  ||||||||||||||||||    
T  34389069 ccagactatagtaccaaattagcagggcacccctcgcccctggtacaccagagaaaaaccaaat 34389132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 23 - 217
Target Start/End: Complemental strand, 20138642 - 20138448
Alignment:
Q  23 aagaacaccctcaaaa-taaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacct 120  Q
    |||||||||||||||| ||||||||| |||||||||||||||||| | | ||| | ||||||||||||| || ||| || |||||||||  || ||||||    
T  20138642 aagaacaccctcaaaaataaaactcccagaccccaacacccaagccgggtcacatttcgaagagcacctaaccgaaggatcatgcagctatcacaaacct 20138543  T
Q  121 cgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcgg 217  Q
    |||||||||||||||||| ||||||||||| |   ||||||||||||||||| | |||||||||| |||||||||||||  ||||||||||||||||    
T  20138542 cgcgacctccgatccaccgaaagagcacaacac--aaagcccaaaaaccaacataagtcaaagaactgactcccgatctcaaatcaaaagtgatcgg 20138448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 23 - 257
Target Start/End: Original strand, 15821245 - 15821478
Alignment:
Q  23 aagaacac-cctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctc 121  Q
    |||||||| ||||||||||||||||| ||||  ||||| || ||||||||||| | ||||| ||| ||| ||  |||||||| |  | ||||| ||||||    
T  15821245 aagaacactcctcaaaataaaactcccagacttcaacatccgagctgagccacat-tcgaaaagctcctaaccaaatgaacaagttgtttccacaacctc 15821343  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
     ||||||| |||||||  ||||||||||||| ||||||||||||||||||| | |||||||||  ||||||||||||| ||||||||||||||| |||||    
T  15821344 tcgacctctgatccactgaaagagcacaaaa-caaaagcccaaaaaccaacataagtcaaagagctgactcccgatctcgaatcaaaagtgatcagccca 15821442  T
Q  222 ccagacgttagtaccaaattagcaggacacctctcg 257  Q
    |||||| |||| ||||||| |||||| |||| ||||    
T  15821443 ccagactttagaaccaaatcagcagggcacccctcg 15821478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 23 - 242
Target Start/End: Original strand, 12898141 - 12898358
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagct-tccaaaacctc 121  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||| | ||||||||||||| || ||| || || |||||| ||  |||||||    
T  12898141 aagaacaccctcaaaataaaactctaagaccccaacacccaagctgagccacatttcgaagagcacctaaccgaaggatca-gcagctatcacaaacctc 12898239  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    ||||||||||| ||| | ||||||||||| |   ||||||| ||||||||||||||| | | || ||||||| ||||| |||||||||||||||||  ||    
T  12898240 gcgacctccgaaccatcgaaagagcacaaca--caaagccccaaaaccaacttgagttagataactgactccggatctcgaatcaaaagtgatcgggtca 12898337  T
Q  222 ccagacgttagtaccaaatta 242  Q
    ||||||  || ||||||||||    
T  12898338 ccagactatattaccaaatta 12898358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 23 - 227
Target Start/End: Original strand, 41893268 - 41893469
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagct-tccaaaacctc 121  Q
    ||||||||||| |||||| |||||| ||||| |||||||||||||||||||| | |||||||| |||| |  ||| || ||||||||| ||  ||||||     
T  41893268 aagaacaccctgaaaatagaactcccagacctcaacacccaagctgagccacatttcgaagagtacct-atagaaggatcatgcagctatcacaaacctt 41893366  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    ||||||||  | ||||||||||||||||| |   |||||||||||| ||||||||| ||||||| ||||||||||||| |||||||||||| | ||||||    
T  41893367 gcgacctcttaaccaccaaaagagcacaaca--caaagcccaaaaa-caacttgagacaaagaactgactcccgatctcgaatcaaaagtggttggccca 41893463  T
Q  222 ccagac 227  Q
    ||||||    
T  41893464 ccagac 41893469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 60 - 257
Target Start/End: Original strand, 16457364 - 16457559
Alignment:
Q  60 cccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaa 158  Q
    ||||||||||||||| | || |||||||||| ||   | || |||||||||  || ||||||| |||| ||||| ||||| ||||||||||| |   |||    
T  16457364 cccaagctgagccacatttcaaagagcacctaaccacaagatcatgcagctatcacaaacctcacgacatccgaaccaccgaaagagcacaacac--aaa 16457461  T
Q  159 gcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaattagcaggacacctctcg 257  Q
    ||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||| ||  ||||| ||||||||||||||||| ||||    
T  16457462 gcctaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcgg-ccaccaaactatagtatcaaattagcaggacacccctcg 16457559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 95 - 208
Target Start/End: Original strand, 38577728 - 38577840
Alignment:
Q  95 gaatgaacatgcagcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactccc 194  Q
    |||||||||||||||||||| || ||| ||||||| |||||||| ||||||||| |||||||||| |||||||||||||| |  ||||||| | ||||||    
T  38577728 gaatgaacatgcagcttccacaaactctcgacctctgatccaccgaaagagcac-aaaacaaaagtccaaaaaccaacttaaaccaaagaactaactccc 38577826  T
Q  195 gatcttgaatcaaa 208  Q
    ||||| ||||||||    
T  38577827 gatctcgaatcaaa 38577840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 106 - 284
Target Start/End: Original strand, 10248504 - 10248680
Alignment:
Q  106 cagcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatc 205  Q
    |||||||||  |||||||| |||||||||||||||||||   || | |   ||||  |||| | |||||||| ||||||| |||||||||||||||||||    
T  10248504 cagcttccaccacctcgcggcctccgatccaccaaaagaaaccatata---aagcaaaaaaccaaacttgagccaaagaactgactcccgatcttgaatc 10248600  T
Q  206 aaaagtgatcggcccaccagacgttagtaccaaattagcaggacacctctc-ggcccggtgtaccagagaaaaaccaaat 284  Q
    |||||||||||| |||||| |  |||| || ||||||| |||||||| |||   ||||||  |||||||||| |||||||    
T  10248601 aaaagtgatcggtccaccaaattttaggacaaaattagaaggacacccctcacccccggtacaccagagaaacaccaaat 10248680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 32945700 - 32945767
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccac 222  Q
    |||||||||||| | ||||||| |||||||||||||||||||||| ||||||||||||||| ||||||    
T  32945700 aaaagcccaaaaccaaacttgaatcaaagaattgactcccgatctcgaatcaaaagtgatcagcccac 32945767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 155 - 284
Target Start/End: Original strand, 17656999 - 17657128
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaattagcaggacacctc 254  Q
    ||||| |||||| | |||||||| ||||||| ||||||||||||| |||||||||||||||| ||||||| || ||||  |||| |||| ||| |||| |    
T  17656999 aaaagtccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcgacccaccatactttaggtccaacttagaagggcacccc 17657098  T
Q  255 tcggcccggtgtaccagagaaaaaccaaat 284  Q
    ||  ||||||  | |||||||| |||||||    
T  17657099 tcatcccggtacatcagagaaacaccaaat 17657128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 15906767 - 15906698
Alignment:
Q  158 agcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||||||| | |||||||  ||||||| ||||||||||||| |||||||| ||||||||||||||||||    
T  15906767 agcccaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaatgtgatcggcccaccagac 15906698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 152
Target Start/End: Original strand, 35816181 - 35816238
Alignment:
Q  95 gaatgaacatgcagcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaa 152  Q
    |||||||||||||||||||| || ||| | ||||||||||||||||||||||||||||    
T  35816181 gaatgaacatgcagcttccacaatctctcaacctccgatccaccaaaagagcacaaaa 35816238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 30236125 - 30236197
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    |||||||||||| | |||||||  ||||||| ||||||||||||| |||||||||| ||||| ||||||||||    
T  30236125 aaaagcccaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcgtcccaccagac 30236197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 138
Target Start/End: Complemental strand, 22773699 - 22773598
Alignment:
Q  38 ataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagct-tccaaaacctcgcgacctccgatcca 136  Q
    |||||||||| |||||||||||||||| ||||||||| | ||||||||||||| || ||| || |||| || | ||  |||||||| ||||||| |||||    
T  22773699 ataaaactcccagaccccaacacccaaactgagccacatttcgaagagcacctaacagaaggatcatgtagatatcacaaacctcgtgacctccaatcca 22773600  T
Q  137 cc 138  Q
    ||    
T  22773599 cc 22773598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 10552325 - 10552267
Alignment:
Q  182 agaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 240  Q
    |||| ||||||||||||| |||||||||| |||||||||||||||| | || |||||||    
T  10552325 agaactgactcccgatctagaatcaaaagcgatcggcccaccagacttcagaaccaaat 10552267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 12198066 - 12198138
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    |||||| ||||| | |||||||| ||||||| |||||||| || || ||| |||||||||||| |||||||||    
T  12198066 aaaagctcaaaaccaaacttgagccaaagaactgactcccaattttcaattaaaagtgatcggtccaccagac 12198138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 12442494 - 12442566
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    |||||| ||||| | |||||||| ||||||| |||||||| || || ||| |||||||||||| |||||||||    
T  12442494 aaaagctcaaaaccaaacttgagccaaagaactgactcccaattttcaattaaaagtgatcggtccaccagac 12442566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 227
Target Start/End: Complemental strand, 33967389 - 33967338
Alignment:
Q  176 agtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||||| | ||| |||| ||||| |||||||||||||||||||||||||||    
T  33967389 agtcaaaaagttggctcctgatctcgaatcaaaagtgatcggcccaccagac 33967338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 40531281 - 40531244
Alignment:
Q  190 ctcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  40531281 ctcccgatctcgaatcaaaagtgatcggcccatcagac 40531244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 130; Significance: 4e-67; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 26 - 284
Target Start/End: Complemental strand, 41920669 - 41920407
Alignment:
Q  26 aacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatg-----aacatgcagcttcca-aaacc 119  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |   ||||||||||| |||||| |     | |||||||||  || |||||    
T  41920669 aacaccctcaaaataaaactccaagaccccaacacccaagctgagccacatgatgaagagcacctaactgaaggttaggatcatgcagctatcacaaacc 41920570  T
Q  120 tcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcc 219  Q
    ||||||||||||||||||| ||||||||||| |   ||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  41920569 tcgcgacctccgatccaccgaaagagcacaacac--aaagcccaaaatccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcc 41920472  T
Q  220 caccagacgttagtaccaaattagcaggacacctctcggcccggtgtaccagagaaaaaccaaat 284  Q
    ||||||||  |||||||||||||||||| |||| |||| ||| ||  ||||||||||||||||||    
T  41920471 caccagactgtagtaccaaattagcagggcacccctcgccccagtacaccagagaaaaaccaaat 41920407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 23 - 284
Target Start/End: Original strand, 5389287 - 5389548
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctc 121  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| | || ||| || |||| ||||  || |||||||    
T  5389287 aagaacaccctcaaaataaaactcccagaccccaacacccaagctgagccacatatcgaagagcacttaaccgaaggaccatgtagctaacacaaacctc 5389386  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    ||||||||||| ||||| ||||||||||| |   ||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||     
T  5389387 gcgacctccgaaccaccgaaagagcacaacac--aaagcccaaaaacaaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggccct 5389484  T
Q  222 ccagacgttagtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 284  Q
     |||||  ||||||||||||||| || |||| ||||  ||||||  |||||||||||| |||||    
T  5389485 tcagactatagtaccaaattagctgggcacccctcgcccccggtacaccagagaaaaatcaaat 5389548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 26 - 283
Target Start/End: Original strand, 24449799 - 24450056
Alignment:
Q  26 aacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagct-tccaaaacctcgcg 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||| || ||| || |||||| || ||  ||||||||||    
T  24449799 aacaccctcaaaataaaactcctagaccccaacacccaagctgagccgcatttcgaagagcacctaaccgaaggatcatgcaactatcacaaacctcgcg 24449898  T
Q  125 acctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccacca 224  Q
    |||||||||||||||||||||||||| |   ||| ||||||||||||||| || ||||||| ||||| |||||||  |||||||||||||||||||||||    
T  24449899 acctccgatccaccaaaagagcacaaca--caaatcccaaaaaccaacttaagacaaagaactgacttccgatctcaaatcaaaagtgatcggcccacca 24449996  T
Q  225 gacgttagtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaa 283  Q
     ||  |||||||||| ||||||| |||| ||||  ||||||  |||||||||||||||||    
T  24449997 aactatagtaccaaaatagcagggcacccctcgcccccggtacaccagagaaaaaccaaa 24450056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 23 - 284
Target Start/End: Original strand, 31585625 - 31585887
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagacccc-aacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacct 120  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||| |||||| | ||||||||||||| ||  || || ||| |||||  || ||||||    
T  31585625 aagaacaccctcaaaataaaactctcagacccccaacacccaagcttagccacatttcgaagagcacctaaccaaaggatcatacagctatcacaaacct 31585724  T
Q  121 cgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccc 220  Q
    |||||||||||| ||||| ||| ||||||| |   |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  31585725 cgcgacctccgacccaccgaaatagcacaacac--aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggccc 31585822  T
Q  221 accagacgttagtaccaaattagcaggacacctctcggcc-cggtgtaccagagaaaaaccaaat 284  Q
    |||||||  |||||||||||||||||| |||| |||  || | ||  ||||||||||||||||||    
T  31585823 accagactatagtaccaaattagcagggcacccctcaccctcagtacaccagagaaaaaccaaat 31585887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 23 - 284
Target Start/End: Original strand, 46692685 - 46692946
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctc 121  Q
    |||||||||||| |||||||||| | |||||||||||||||||||||||||| | ||||||||||| | || | | ||  ||||||||  || |||||||    
T  46692685 aagaacaccctccaaataaaacttccagaccccaacacccaagctgagccacatttcgaagagcacttaaccggaggataatgcagctatcacaaacctc 46692784  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    ||||||||||| ||||| ||||||||||| |   |||||||||||||||||||||| ||||||| | ||||||||||| |||||||||||||||||||||    
T  46692785 gcgacctccgaaccaccgaaagagcacaacac--aaagcccaaaaaccaacttgagccaaagaactaactcccgatctcgaatcaaaagtgatcggccca 46692882  T
Q  222 ccagacgttagtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 284  Q
    ||||||  ||  |||||||||||||| |||||||||  ||||||  |||||||||||| |||||    
T  46692883 ccagactatatcaccaaattagcagggcacctctcgcccccggtacaccagagaaaaatcaaat 46692946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 23 - 247
Target Start/End: Complemental strand, 5459376 - 5459153
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctc 121  Q
    ||||||||| ||||||||||||| | |||||||||||||||||||||||||| | || |||||||||| |||||| || |||||||||  || |||||||    
T  5459376 aagaacaccatcaaaataaaacttccagaccccaacacccaagctgagccacatttcaaagagcacctaactgaaggatcatgcagctatcacaaacctc 5459277  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    || |||||||| ||||  ||||||||||| |   |||||||||||| |||||||| ||||| |||||||||||||||| |||||||||||||||||||||    
T  5459276 gcaacctccgaaccactgaaagagcacaacac--aaagcccaaaaatcaacttgaatcaaataattgactcccgatctcgaatcaaaagtgatcggccca 5459179  T
Q  222 ccagacgttagtaccaaattagcagg 247  Q
    ||||||  ||| ||||||||||||||    
T  5459178 ccagactatagcaccaaattagcagg 5459153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 49 - 277
Target Start/End: Original strand, 24684370 - 24684598
Alignment:
Q  49 agaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccgatccaccaaaagagcac 148  Q
    ||||||| ||| ||||| |||||||| | |||||||||||||||| ||| || |||||| |||||| ||||||||||||||||||||||| |||||||||    
T  24684370 agaccccgacatccaagttgagccacatttcgaagagcacctgaccgaaggatcatgcatcttccacaacctcgcgacctccgatccaccgaaagagcac 24684469  T
Q  149 aaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaattagcagga 248  Q
     |||||||||||||||||||||||| ||||||||||| ||||  ||||||| |||| |||||||||||||||||||||| |||| | |||||||| |||     
T  24684470 -aaaacaaaagcccaaaaaccaactagagtcaaagaactgacatccgatctcgaattaaaagtgatcggcccaccagactttagaatcaaattagtaggg 24684568  T
Q  249 cacctctcg-gcccggtgtaccagagaaaa 277  Q
    |||| ||||  ||||||  |||||||||||    
T  24684569 cacccctcgcccccggtacaccagagaaaa 24684598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 30 - 257
Target Start/End: Complemental strand, 7857860 - 7857635
Alignment:
Q  30 ccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctc 129  Q
    |||||||||||||||||| ||||  |||||||||| ||||||||| | || || ||| ||| || ||||| ||| |||||||||| |||||| ||||| |    
T  7857860 ccctcaaaataaaactcccagacttcaacacccaaactgagccacatttcaaa-agctcctaaccgaatggacaagcagcttccacaacctctcgaccac 7857762  T
Q  130 cgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgt 229  Q
    ||||||||| ||||||||||||| |||||| |||||||||||||| ||  ||||| |||||||||||||| ||||||||||||||||||||||||||| |    
T  7857761 cgatccaccgaaagagcacaaaa-caaaaggccaaaaaccaacttcagcaaaagagttgactcccgatctcgaatcaaaagtgatcggcccaccagactt 7857663  T
Q  230 tagtaccaaattagcaggacacctctcg 257  Q
    ||| ||||||| |||||| |||| ||||    
T  7857662 tagaaccaaatcagcagggcacccctcg 7857635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 53 - 284
Target Start/End: Original strand, 30685800 - 30686031
Alignment:
Q  53 cccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctccgatccaccaaaagagcacaaa 151  Q
    |||||||||||||||||||||| |||| | |||||||| ||  || || |||||||||  || |||||||||||||||||| ||||| |||||||||||     
T  30685800 cccaacacccaagctgagccacatatcaaggagcacctaaccaaaggatcatgcagctatcacaaacctcgcgacctccgaaccaccgaaagagcacaac 30685899  T
Q  152 aacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaattagcaggacac 251  Q
    |   ||||||||||| |||||||||||||||||| |||||||||||||  ||||||||||||||||||||| ||||  |||||||||||||||||| |||    
T  30685900 ac--aaagcccaaaagccaacttgagtcaaagaactgactcccgatctcaaatcaaaagtgatcggcccacaagactatagtaccaaattagcagggcac 30685997  T
Q  252 ctctcggccc-ggtgtaccagagaaaaaccaaat 284  Q
    | |||| ||| |||  ||||||||||||||||||    
T  30685998 ccctcgccccaggtacaccagagaaaaaccaaat 30686031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 30 - 252
Target Start/End: Original strand, 27031714 - 27031934
Alignment:
Q  30 ccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctc 129  Q
    |||||||||||||||||| ||||  ||||| |||| ||||||||| | ||||| ||| | | || |||||||||||||||||||| |||||| | |||||    
T  27031714 ccctcaaaataaaactcccagacttcaacatccaaactgagccacat-tcgaaaagctcttaaccgaatgaacatgcagcttccacaacctctcaacctc 27031812  T
Q  130 cgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgt 229  Q
    ||||||||| ||||||||||||| ||||| ||| |||||||||||||| ||||||  |||||| |||||| |||||||||||||||||||||| |||| |    
T  27031813 cgatccaccgaaagagcacaaaa-caaaatccctaaaaccaacttgagccaaagagctgactctcgatctcgaatcaaaagtgatcggcccactagactt 27031911  T
Q  230 tagtaccaaattagcaggacacc 252  Q
    ||| ||||||| |||||| ||||    
T  27031912 tagaaccaaatcagcagggcacc 27031934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 30 - 252
Target Start/End: Complemental strand, 24659135 - 24658916
Alignment:
Q  30 ccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctc 129  Q
    |||||||||||||||||| ||||   ||| |||| |||||||||| | ||||| |||  || || |||||||||||  ||||||| |||||| |||||||    
T  24659135 ccctcaaaataaaactcccagactt-aactcccaggctgagccacat-tcgaaaagcttctaaccgaatgaacatgatgcttccacaacctctcgacctc 24659038  T
Q  130 cgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgt 229  Q
    ||||||||| ||||||||||||| |||| |||||||||||||||| || ||||||  ||||||||||||| |||||||||||||| |||||||||||| |    
T  24659037 cgatccaccgaaagagcacaaaaccaaa-gcccaaaaaccaacttcagccaaagagctgactcccgatctcgaatcaaaagtgattggcccaccagactt 24658939  T
Q  230 tagtaccaaattagcaggacacc 252  Q
    ||| ||||||| |||||| ||||    
T  24658938 tagaaccaaatcagcagggcacc 24658916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 30 - 252
Target Start/End: Original strand, 46814341 - 46814561
Alignment:
Q  30 ccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctc 129  Q
    ||||| |||||||||||| | ||  ||||||||| || ||||||| | ||||| ||| ||| |  |||||||| |||||||||   |||||| |||| ||    
T  46814341 ccctcgaaataaaactcccatacttcaacacccacgccgagccacat-tcgaaaagctcctaatcgaatgaacttgcagcttctgcaacctctcgacatc 46814439  T
Q  130 cgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgt 229  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||||||| |||| |  ||||||||||||| ||||||||||||||||||||||||||| |    
T  46814440 cgatccaccgaaagagcacaaaa-caaaagccaaaaaaccaacttgagccaaaaagctgactcccgatctcgaatcaaaagtgatcggcccaccagactt 46814538  T
Q  230 tagtaccaaattagcaggacacc 252  Q
    ||| ||||||| |||||| ||||    
T  46814539 tagaaccaaatcagcagggcacc 46814561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 20113523 - 20113647
Alignment:
Q  160 cccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaattagcaggacacctctcg-g 258  Q
    ||||||||||||||| ||| |||||| ||| ||||||||||||||||||| |||||| |||| |||||  || ||||||||||||||| |||| ||||      
T  20113523 cccaaaaaccaacttaagttaaagaactgattcccgatcttgaatcaaaaatgatcgtcccagcagactataataccaaattagcagggcacccctcgcc 20113622  T
Q  259 cccggtgtaccagagaaaaaccaaa 283  Q
    ||||||  ||| |||||||||||||    
T  20113623 cccggtacacccgagaaaaaccaaa 20113647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 19598720 - 19598648
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    |||| ||||||| | |||||||||||||||| |||||| |||||| |||||||||| ||||||||||||||||    
T  19598720 aaaaacccaaaatcaaacttgagtcaaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagac 19598648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 6583237 - 6583298
Alignment:
Q  179 caaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 240  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||||||| |||| |||||||    
T  6583237 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccagactttaggaccaaat 6583298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 27102275 - 27102210
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccc 220  Q
    |||||||||||| | |||||||  ||||||| ||||||||||||| ||||||||||||||||||||    
T  27102275 aaaagcccaaaaccaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggccc 27102210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 32864558 - 32864643
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 240  Q
    |||||||||||| | ||||||||||||||||  |||| ||||||| |||| ||||||||| |||||||||| | |||| |||||||    
T  32864558 aaaagcccaaaaccaaacttgagtcaaagaaccgacttccgatctcgaattaaaagtgattggcccaccagcctttaggaccaaat 32864643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 170 - 240
Target Start/End: Complemental strand, 17033655 - 17033585
Alignment:
Q  170 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 240  Q
    |||||||  ||||||| ||||||||||||| || ||||||||||||||||||||||||  ||| |||||||    
T  17033655 aacttgaaccaaagaactgactcccgatctcgattcaaaagtgatcggcccaccagactataggaccaaat 17033585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 9313310 - 9313371
Alignment:
Q  179 caaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 240  Q
    ||||||| ||||||||||||| ||||||||||||||| |||||| |||| |||| |||||||    
T  9313310 caaagaactgactcccgatctcgaatcaaaagtgatcagcccactagactttaggaccaaat 9313371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 38544759 - 38544807
Alignment:
Q  179 caaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  38544759 caaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagac 38544807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 6764247 - 6764334
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagct 110  Q
    ||||||| ||| ||||||||||||| ||||||||  | ||||| |||||||| | ||||||||||||| || ||| || |||||||||    
T  6764247 aagaacatcctgaaaataaaactcccagaccccagtatccaagttgagccacatttcgaagagcacctaaccgaaggaccatgcagct 6764334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 34774955 - 34774870
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaat-tgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 240  Q
    ||||||||||||   |||||||| |||| ||  ||||||||||||| || |||||||||||||| |||||||||||||| |||||||    
T  34774955 aaaagcccaaaactaaacttgagccaaaaaaactgactcccgatctcga-tcaaaagtgatcggtccaccagacgttaggaccaaat 34774870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 15840924 - 15840981
Alignment:
Q  170 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||||| ||||  || ||||||||||||| ||||||||||||||| |||||||||||    
T  15840924 aacttgaatcaagaaactgactcccgatctcgaatcaaaagtgatcagcccaccagac 15840981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 22200069 - 22200020
Alignment:
Q  178 tcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    |||||| |||||||| |||||||||||||||||||||||| ||| |||||    
T  22200069 tcaaagcattgactctcgatcttgaatcaaaagtgatcggtccatcagac 22200020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 2877711 - 2877652
Alignment:
Q  164 aaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccacca 224  Q
    ||||||||||||||||||||| | | ||||| ||||||||||||| | |||||||||||||    
T  2877711 aaaaccaacttgagtcaaagactgg-ctcccaatcttgaatcaaatgcgatcggcccacca 2877652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 187 - 227
Target Start/End: Complemental strand, 4651832 - 4651792
Alignment:
Q  187 tgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||||||||||| |||||||||||||||||||| ||||||    
T  4651832 tgactcccgatctcgaatcaaaagtgatcggccccccagac 4651792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 217
Target Start/End: Complemental strand, 22239738 - 22239699
Alignment:
Q  178 tcaaagaattgactcccgatcttgaatcaaaagtgatcgg 217  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  22239738 tcaaagcattgactctcgatcttgaatcaaaagtgatcgg 22239699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 224
Target Start/End: Complemental strand, 16147639 - 16147570
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccacca 224  Q
    ||||| |||||| | |||||||  ||||||| ||||||||||| ||||||||||| | |||| |||||||    
T  16147639 aaaagtccaaaatcaaacttgacccaaagaactgactcccgatattgaatcaaaattcatcgtcccacca 16147570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 10785456 - 10785524
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccacc 223  Q
    |||||||||||| | |||||||| |||| || ||||||||||||| ||| ||||| | | |||||||||    
T  10785456 aaaagcccaaaaccaaacttgagccaaacaactgactcccgatctcgaagcaaaattaaccggcccacc 10785524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 227
Target Start/End: Complemental strand, 30655612 - 30655572
Alignment:
Q  187 tgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||||||||||| |||||||||| ||||||||||| ||||    
T  30655612 tgactcccgatctcgaatcaaaagcgatcggcccactagac 30655572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 3e-58; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 23 - 247
Target Start/End: Complemental strand, 34378313 - 34378090
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctc 121  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||||||| |  ||||||||| || || ||| || ||  || ||  || |||||||    
T  34378313 aagaacaccctcaaaataaaactctcaaaccccaacacccaagctgagccacattacgaagagcatctaaccgaaggatcaaacaactatcacaaacctc 34378214  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    |||||||||| |||||| |||||||||||||   |||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||    
T  34378213 gcgacctccggtccaccgaaagagcacaaaac--aaagcccaaaaaccaacttgtgtcaaagaactgactcccgatctcgaatcaaaagtgatcggccca 34378116  T
Q  222 ccagacgttagtaccaaattagcagg 247  Q
    |||||| |||||||||||||||||||    
T  34378115 ccagactttagtaccaaattagcagg 34378090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 284
Target Start/End: Complemental strand, 698576 - 698315
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctc 121  Q
    |||||||||||| |||||||||||  |||||||||||||||||||||||||| | || |||||||||| || ||| ||  ||||||||  || |||||||    
T  698576 aagaacaccctccaaataaaactctcagaccccaacacccaagctgagccacatttcaaagagcacctaaccgaaggattatgcagctatcacaaacctc 698477  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    || ||||| || ||||  |||||| |||| |   ||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||| |||    
T  698476 gcaacctctgaaccacagaaagagtacaacac--aaagcccaaaaaccaacttgagtcaaagagttgactcccgatctcgaatcaaaagagatcggtcca 698379  T
Q  222 ccagacgttagtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 284  Q
    ||||||  ||| |||||||||||||| |||| ||||  ||||||  ||||||||||||||||||    
T  698378 ccagactatagcaccaaattagcagggcacccctcgcccccggtacaccagagaaaaaccaaat 698315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 29 - 246
Target Start/End: Complemental strand, 29087689 - 29087474
Alignment:
Q  29 accctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacct 128  Q
    |||||||||||||| |||| ||||||||||| | ||| |||||||| || |||||||||||||||  || || |||| |||| ||| |||||||||||||    
T  29087689 accctcaaaataaagctcccagaccccaacatctaagttgagccacata-cgaagagcacctgaccaaaggatcatggagctaccataacctcgcgacct 29087591  T
Q  129 ccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacg 228  Q
    |||||||||| ||||||||||||| |||||||||| ||||||| |||| |||||||| ||||||| ||||| |||||||||| |||| | |||||||||     
T  29087590 ccgatccaccgaaagagcacaaaa-caaaagcccagaaaccaatttgattcaaagaactgactcctgatctcgaatcaaaagggatcagtccaccagact 29087492  T
Q  229 ttagtaccaaattagcag 246  Q
    |||| |||||| ||||||    
T  29087491 ttagaaccaaaatagcag 29087474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 23 - 284
Target Start/End: Complemental strand, 18593458 - 18593197
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagct-tccaaaacctc 121  Q
    ||||||| |||| |||||||||||| ||||||||||||||||| |||||||| | ||||||| ||||| || ||| || |||||| || ||  ||| |||    
T  18593458 aagaacatcctccaaataaaactcccagaccccaacacccaagttgagccacatttcgaagaacacctaaccgaaggatcatgcacctatcacaaatctc 18593359  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    ||||||||||| ||||| ||||||||||| |    ||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||| |||||    
T  18593358 gcgacctccgaaccaccgaaagagcacaaca--ctaagcccaaaaaccaacttgagtcaaagaactaactcccgatctcgaatcaaaagtgatctgccca 18593261  T
Q  222 ccagacgttagtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 284  Q
    | | ||  ||| |||||||||||||| || | ||||  ||||||  || |||||||||||||||    
T  18593260 ctaaactatagcaccaaattagcagggcatccctcgcccccggtacacgagagaaaaaccaaat 18593197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 107 - 194
Target Start/End: Original strand, 7162267 - 7162353
Alignment:
Q  107 agcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactccc 194  Q
    |||||||| ||||||||||||||||||||| | ||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||    
T  7162267 agcttccataacctcgcgacctccgatccatcgaaagagcacaaaa-caaaaacccaaaaaccaacttgagtcaaagaactgactccc 7162353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 7161882 - 7161973
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca 114  Q
    ||||||||| ||||||||||||||| |||||||||||| ||||||||||||| ||||||||| ||||||||  || || |||||||||||||    
T  7161882 aagaacaccatcaaaataaaactcccagaccccaacacacaagctgagccacatatcgaagaacacctgaccaaaggatcatgcagcttcca 7161973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 13954231 - 13954316
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 240  Q
    |||||||||||| | |||||||| ||||| | ||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  13954231 aaaagcccaaaaccaaacttgagccaaagtaatgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaat 13954316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 7195236 - 7195308
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    |||||||||||  | |||||||| ||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  7195236 aaaagcccaaactctaacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcggctcaccagac 7195308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 7392052 - 7392113
Alignment:
Q  179 caaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 240  Q
    ||||||| ||||||||||||| ||||||||||||||||| ||||||||| |||| |||||||    
T  7392052 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttaggaccaaat 7392113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 22675322 - 22675398
Alignment:
Q  156 aaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttag 232  Q
    ||||||||||| | |||||||| ||||||| ||||||||||||| |||||||||  |||||| ||||||||| ||||    
T  22675322 aaagcccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaatcgatcggtccaccagactttag 22675398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 239
Target Start/End: Original strand, 14302377 - 14302511
Alignment:
Q  102 catgcagcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttg 201  Q
    |||||||||||||  ||||| |||||||||||||||| |||||   || |||   |||||||||| | ||||||   ||||||| |||||||| |||| |    
T  14302377 catgcagcttccaccacctctcgacctccgatccaccgaaagaaaccataaa---aagcccaaaaccaaacttgctccaaagaactgactcccaatctcg 14302473  T
Q  202 aatcaaaagtgatcggcccaccagacgttagtaccaaa 239  Q
    || ||||||||||| | ||||||||| |||| ||||||    
T  14302474 aaccaaaagtgatcagtccaccagactttaggaccaaa 14302511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 224
Target Start/End: Original strand, 21402834 - 21402903
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccacca 224  Q
    |||||| ||||| | ||| |||||||||||| ||||||||||||| |||  |||||||||||||||||||    
T  21402834 aaaagctcaaaaccaaacctgagtcaaagaactgactcccgatctcgaactaaaagtgatcggcccacca 21402903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 33258903 - 33258976
Alignment:
Q  179 caaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaattagcaggacacc 252  Q
    ||||||| | ||||| ||||| ||||||||||||||||||||||||||| |||| ||||||  || ||||||||    
T  33258903 caaagaactaactcctgatctcgaatcaaaagtgatcggcccaccagactttagcaccaaaacagaaggacacc 33258976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 27713153 - 27713081
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    |||||||||||| | |||||||| ||||||| ||| ||||||||| |||||||||  ||||||||||| ||||    
T  27713153 aaaagcccaaaaccaaacttgagccaaagaactgattcccgatctcgaatcaaaaacgatcggcccactagac 27713081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 39184208 - 39184256
Alignment:
Q  179 caaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||||| ||||| ||||||| |||||||||||||||||||||||||||    
T  39184208 caaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagac 39184256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 239
Target Start/End: Complemental strand, 25992091 - 25992007
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaa 239  Q
    |||||||||||| | | || |||  |||||| |||||| |||||| |||||||||| ||| |||||||||||| |||| ||||||    
T  25992091 aaaagcccaaaaccaacctcgagctaaagaactgactctcgatctcgaatcaaaagcgattggcccaccagactttagcaccaaa 25992007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 26045961 - 26046045
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaa 239  Q
    ||||| |||||| | |||||||| ||||  | | ||||||||||| |||||||||||||||||  |||||||| |||| ||||||    
T  26045961 aaaagtccaaaaccaaacttgagccaaaacactaactcccgatctcgaatcaaaagtgatcggttcaccagactttaggaccaaa 26046045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 8297552 - 8297498
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaa 209  Q
    ||||| |||||| | |||||||| ||||||| ||||||||||||| |||||||||    
T  8297552 aaaagtccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaa 8297498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 12046303 - 12046270
Alignment:
Q  191 tcccgatcttgaatcaaaagtgatcggcccacca 224  Q
    ||||||||| ||||||||||||||||||||||||    
T  12046303 tcccgatctcgaatcaaaagtgatcggcccacca 12046270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 23426425 - 23426356
Alignment:
Q  158 agcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||||||| | || |||| || ||||| |||||||| |||| |||||||||||| |||| |||||||||    
T  23426425 agcccaaaaccaaaattgattcgaagaactgactcccaatctcgaatcaaaagtgttcggtccaccagac 23426356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 18313544 - 18313636
Alignment:
Q  59 acccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagct-tccaaaacctcgcgacctccgatccaccaaaagagcacaa 150  Q
    |||||| || |||||| | ||||||||||||| |  |||||| ||||||||| ||  |||||||||||||| | ||||||| |||||| ||||    
T  18313544 acccaaactaagccacatttcgaagagcacctaaacgaatgatcatgcagctatcacaaacctcgcgaccttcaatccaccgaaagagtacaa 18313636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 3e-52; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 284
Target Start/End: Complemental strand, 3117708 - 3117447
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctc 121  Q
    |||||||||||  |||||||||||| ||||||||||||||||| |||||||| | ||||||||||| | |  ||| || |||||| ||  || |||||||    
T  3117708 aagaacaccctataaataaaactcccagaccccaacacccaagttgagccacatttcgaagagcacataatcgaaggatcatgcaactatcacaaacctc 3117609  T
Q  122 gcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 221  Q
    ||||||||||| ||||  ||||||||||| |   |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3117608 gcgacctccgaaccacataaagagcacaacac--aaagcccaaaaaccaacttgagtcaaagaactgactcccgatcttgaatcaaaagtgatcggccca 3117511  T
Q  222 ccagacgttagtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 284  Q
    ||| ||  ||  | |||||||||||| |||| ||||  |||||   ||||||||||||||||||    
T  3117510 ccatactatatcaacaaattagcagggcacccctcgcccccggaacaccagagaaaaaccaaat 3117447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 161 - 281
Target Start/End: Original strand, 16510304 - 16510425
Alignment:
Q  161 ccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaattagcaggacacctctcggcc 260  Q
    |||||||||||||||||| |||||| |||||| | |||| |||||||||||||||||||||| |||| |||| |||||||||||||| |||| || | ||    
T  16510304 ccaaaaaccaacttgagtaaaagaactgactctcaatctcgaatcaaaagtgatcggcccactagactttagaaccaaattagcagggcaccccttgccc 16510403  T
Q  261 -cggtgtaccagagaaaaacca 281  Q
     ||||  |||||||||||||||    
T  16510404 tcggtacaccagagaaaaacca 16510425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 32935336 - 32935421
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 240  Q
    ||||| |||||| | |||||||||| ||||| ||||||||||||| |||||||||| |||||||||||||||| | || |||||||    
T  32935336 aaaagtccaaaatcaaacttgagtccaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagacttcaggaccaaat 32935421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 10542047 - 10541980
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacct 90  Q
    ||||| |||||| |||||||||| | |||||||||||||||||||||||||| | |||||||||||||    
T  10542047 aagaataccctccaaataaaacttccagaccccaacacccaagctgagccacatttcgaagagcacct 10541980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 106 - 225
Target Start/End: Original strand, 20701754 - 20701870
Alignment:
Q  106 cagcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatc 205  Q
    |||||||||  ||||| |||||||||||||||| |||||   || |||   |||||||||| | ||||| || ||||||| | ||||||||||| |||||    
T  20701754 cagcttccactacctctcgacctccgatccaccgaaagaaaccataaa---aagcccaaaaccaaacttaagccaaagaactaactcccgatctcgaatc 20701850  T
Q  206 aaaagtgatcggcccaccag 225  Q
    ||||||||||||| ||||||    
T  20701851 aaaagtgatcggcacaccag 20701870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 227
Target Start/End: Original strand, 26215970 - 26216088
Alignment:
Q  106 cagcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatc 205  Q
    |||||||||  ||| ||| | ||||| |||||||||||| ||| ||||   |||||||||| | ||  |||  | ||||| ||||||||||||| |||||    
T  26215970 cagcttccaccaccgcgcaatctccggtccaccaaaagaacaccaaaa---aagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatc 26216066  T
Q  206 aaaagtgatcggcccaccagac 227  Q
    ||||||||||||||||||||||    
T  26216067 aaaagtgatcggcccaccagac 26216088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 181 - 254
Target Start/End: Original strand, 26534742 - 26534815
Alignment:
Q  181 aagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaattagcaggacacctc 254  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||| | || ||||||| || ||| ||||||    
T  26534742 aagaactgactcccaatctcgaatcaaaagtgatcggcccaccagacttcaggaccaaatcagaaggccacctc 26534815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 9224101 - 9224042
Alignment:
Q  179 caaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaa 238  Q
    ||||||| ||||||||||||| |||||||||| |||| ||||||||||| |||| |||||    
T  9224101 caaagaactgactcccgatctcgaatcaaaagcgatcagcccaccagactttaggaccaa 9224042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 224
Target Start/End: Complemental strand, 34105479 - 34105428
Alignment:
Q  173 ttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccacca 224  Q
    |||||||||  || ||||||||||||| ||||||||||||||||||||||||    
T  34105479 ttgagtcaagaaactgactcccgatctcgaatcaaaagtgatcggcccacca 34105428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 14663292 - 14663231
Alignment:
Q  23 aagaacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaaga 84  Q
    ||||||| ||||||||||||||||| | ||||||||| |||||| ||||||| | |||||||    
T  14663292 aagaacatcctcaaaataaaactcccaaaccccaacatccaagccgagccacatttcgaaga 14663231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 34092864 - 34092807
Alignment:
Q  170 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||||| ||||||||| |||| || |||| |||||||||||||||||| ||||||||    
T  34092864 aacttgaatcaaagaatagacttcctatctcgaatcaaaagtgatcggctcaccagac 34092807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 201 - 284
Target Start/End: Original strand, 3880626 - 3880710
Alignment:
Q  201 gaatcaaaagtgatcggcccaccagacgttagtaccaaattagcaggacacctctcggcc-cggtgtaccagagaaaaaccaaat 284  Q
    |||||||||||||||||||||||| || |||| ||||||| || ||| ||||||||  || ||||  |||||||||| |||||||    
T  3880626 gaatcaaaagtgatcggcccaccaaactttaggaccaaatcagaagggcacctctcaccctcggtaaaccagagaaacaccaaat 3880710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 240
Target Start/End: Complemental strand, 21266196 - 21266112
Alignment:
Q  156 aaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 240  Q
    ||||||||||| | |||||||  || | || | ||||||||||| |||||||||| |||||||||||||| | |||| |||||||    
T  21266196 aaagcccaaaaccaaacttgaaccacataactaactcccgatctcgaatcaaaagcgatcggcccaccagtctttaggaccaaat 21266112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 13423549 - 13423482
Alignment:
Q  156 aaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccacc 223  Q
    |||||||| || | |||||||| |||||||  ||||| |||||| ||||||||||||||||| |||||    
T  13423549 aaagcccataaccaaacttgagccaaagaaccgactctcgatctcgaatcaaaagtgatcggtccacc 13423482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 12794173 - 12794101
Alignment:
Q  181 aagaattgactcccgatcttgaatcaaaag-tgatcggcccaccagacgttagtaccaaattagcaggacacc 252  Q
    ||||| ||||||| ||||| |||||||||| |||||||||||| |||| |||| ||||||  || ||||||||    
T  12794173 aagaactgactcctgatctcgaatcaaaagttgatcggcccactagactttagaaccaaaacagaaggacacc 12794101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 227
Target Start/End: Complemental strand, 34090415 - 34090375
Alignment:
Q  187 tgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||||||||||| ||||||||| |||||| ||||||||||    
T  34090415 tgactcccgatctcgaatcaaaattgatcgacccaccagac 34090375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 40 - 283
Target Start/End: Original strand, 35655 - 35897
Alignment:
Q  40 aaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctccgatccacc 138  Q
    |||||||| | |||||||||||||||||||||| | | ||||||||||||| || ||  || |||||||||  || ||| |||| |||||||||||||||    
T  35655 aaaactcccacaccccaacacccaagctgagcctcatttcgaagagcacctaaccgatggatcatgcagctatcacaaatctcgtgacctccgatccacc 35754  T
Q  139 aaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaa 238  Q
     ||||||||||| |   ||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||| ||||  ||  |||||    
T  35755 gaaagagcacaacat--aaagcccaaaaaccaacttaagtcaaagaat-gactcccgatctcgaatcaaaagtgatcggcccactagactatataaccaa 35851  T
Q  239 attagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaa 283  Q
    ||||||  | |||| ||||  ||||||  |||||||||||||||||    
T  35852 attagctaggcacccctcgcccccggtacaccagagaaaaaccaaa 35897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 26 - 197
Target Start/End: Complemental strand, 5918 - 5747
Alignment:
Q  26 aacaccctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagct-tccaaaacctcgcg 124  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||| |  |||||||||||| || ||| || || | |||| ||  |||||| |||    
T  5918 aacaccctcaaaataaaactcccagatcccaacacccaagctgagccacattacgaagagcacctaaccgaaggatcaagtagctatcacaaaccttgcg 5819  T
Q  125 acctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgat 197  Q
    |||||||||| ||| ||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||    
T  5818 acctccgatctaccgaaagagcacaaaaac-aaagcccaaaaaccaacctgagtcaaagaactgactcccgat 5747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 19467 - 19382
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 240  Q
    |||||||||||| | |||||||| ||||||| ||||| ||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  19467 aaaagcccaaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaat 19382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 42135 - 42212
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttag 232  Q
    |||| ||||||| | |||||||| ||||||| ||||| ||||||| ||||||||||||||||||||||||||| ||||    
T  42135 aaaatcccaaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttag 42212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 58211 - 58126
Alignment:
Q  155 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 240  Q
    ||||||| |||| | |||||||  |||| |||||||| |||||||||||||||||||||||||||||||| || |||| |||||||    
T  58211 aaaagcctaaaaccaaacttgatccaaacaattgacttccgatcttgaatcaaaagtgatcggcccaccaaactttaggaccaaat 58126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 36773 - 36706
Alignment:
Q  173 ttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 240  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||| |||| |||||| |||| |||||||    
T  36773 ttgagacaaagaactgactcccgatctcgaatcaaaagtgatcagcccgccagactttaggaccaaat 36706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1613 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 1038 - 1086
Alignment:
Q  179 caaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  1038 caaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagac 1086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0620 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 3896 - 3842
Alignment:
Q  173 ttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    |||||||||  || ||||||||||||| ||||||||| |||||||||||||||||    
T  3896 ttgagtcaagaaactgactcccgatctcgaatcaaaattgatcggcccaccagac 3842  T

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Target: scaffold0620; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 8198 - 8141
Alignment:
Q  170 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 227  Q
    ||||||| ||||||||| |||| || |||| |||||||||||||||||| ||||||||    
T  8198 aacttgaatcaaagaatagacttcctatctcgaatcaaaagtgatcggctcaccagac 8141  T

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