View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1837_high_10 (Length: 223)

Name: NF1837_high_10
Description: NF1837
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1837_high_10
NF1837_high_10
[»] chr8 (1 HSPs)
chr8 (62-209)||(39483188-39483335)
[»] chr5 (7 HSPs)
chr5 (78-209)||(31862154-31862285)
chr5 (142-204)||(6264651-6264713)
chr5 (142-204)||(34480581-34480643)
chr5 (141-179)||(4399501-4399539)
chr5 (141-203)||(8571554-8571616)
chr5 (142-203)||(17737781-17737842)
chr5 (142-203)||(34858147-34858208)
[»] chr6 (5 HSPs)
chr6 (105-194)||(4406600-4406689)
chr6 (143-204)||(8873279-8873340)
chr6 (142-203)||(23347920-23347981)
chr6 (142-203)||(15673450-15673511)
chr6 (142-194)||(13755090-13755142)
[»] chr1 (4 HSPs)
chr1 (142-204)||(37530189-37530251)
chr1 (142-204)||(48073885-48073947)
chr1 (142-203)||(3692252-3692313)
chr1 (142-203)||(32353751-32353812)
[»] chr4 (4 HSPs)
chr4 (142-203)||(55298248-55298309)
chr4 (142-203)||(8487435-8487496)
chr4 (142-203)||(23873930-23873991)
chr4 (142-203)||(33313024-33313085)
[»] chr3 (6 HSPs)
chr3 (142-203)||(2813954-2814015)
chr3 (142-203)||(7146666-7146727)
chr3 (142-209)||(24227440-24227507)
chr3 (142-204)||(25873565-25873627)
chr3 (142-203)||(6176932-6176993)
chr3 (142-203)||(29309032-29309093)
[»] chr7 (2 HSPs)
chr7 (142-204)||(13439678-13439740)
chr7 (141-203)||(19728111-19728173)
[»] chr2 (5 HSPs)
chr2 (142-204)||(31594179-31594241)
chr2 (142-204)||(33547497-33547559)
chr2 (142-203)||(22052252-22052313)
chr2 (110-179)||(26490731-26490800)
chr2 (143-204)||(26681507-26681568)


Alignment Details
Target: chr8 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 62 - 209
Target Start/End: Complemental strand, 39483335 - 39483188
Alignment:
Q  62 gttgaactcgtagcggtgtcacgataaaacaaaaaacataagtctatgcccaaacatgctaaagggctcaactatcaagtctgagtaccaaaaacaaaag 161  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||| |||||    
T  39483335 gttgaacgtgtagcggtgtcacgataaaacaaaaaacataagtctatgcccaaacatgctaaagggctcgaccaccaagtctgagtaccaaaaataaaag 39483236  T
Q  162 tgacttttttagctttcacccaccctagagacatcaacttaactttgt 209  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  39483235 tgacttttttagctttcagccaccctagagacatcaacttaactttgt 39483188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 209
Target Start/End: Original strand, 31862154 - 31862285
Alignment:
Q  78 tgtcacgataaaacaaaaaacataagtctatgcccaaacatgctaaagggctcaactatcaagtctgagtaccaaaaacaaaagtgacttttttagcttt 177  Q
    ||||||||||||||||| ||||| |  |||||| |||||| ||||||||| || || | ||||| ||||||||||||||||||||||| |||||||||||    
T  31862154 tgtcacgataaaacaaacaacatcaacctatgctcaaacaagctaaagggttcgaccaccaagtttgagtaccaaaaacaaaagtgacatttttagcttt 31862253  T
Q  178 cacccaccctagagacatcaacttaactttgt 209  Q
    || ||| |||| ||||||||| ||||||||||    
T  31862254 cagccatcctaaagacatcaatttaactttgt 31862285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 204
Target Start/End: Complemental strand, 6264713 - 6264651
Alignment:
Q  142 ctgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagacatcaacttaac 204  Q
    |||||| ||||||||||||||  ||||||||||||||| ||| |||| ||||| |||||||||    
T  6264713 ctgagttccaaaaacaaaagtagcttttttagctttcaaccaacctaaagacaacaacttaac 6264651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 204
Target Start/End: Original strand, 34480581 - 34480643
Alignment:
Q  142 ctgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagacatcaacttaac 204  Q
    |||||| ||||||||||| ||  ||||||||||||||| ||| |||| |||||||||||||||    
T  34480581 ctgagtgccaaaaacaaaggtagcttttttagctttcagccaacctaaagacatcaacttaac 34480643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 4399501 - 4399539
Alignment:
Q  141 tctgagtaccaaaaacaaaagtgacttttttagctttca 179  Q
    ||||||| ||||||||||||||| |||||||||||||||    
T  4399501 tctgagttccaaaaacaaaagtggcttttttagctttca 4399539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 8571554 - 8571616
Alignment:
Q  141 tctgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagacatcaacttaa 203  Q
    ||||||| ||||||||||||||| | ||||||||||||| |||| ||| ||| | ||||||||    
T  8571554 tctgagttccaaaaacaaaagtggcatttttagctttcagccacgctaaagataacaacttaa 8571616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 17737781 - 17737842
Alignment:
Q  142 ctgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagacatcaacttaa 203  Q
    |||||| ||||||||||||||| | ||||||||||||| |||| ||| ||| | ||||||||    
T  17737781 ctgagttccaaaaacaaaagtggcatttttagctttcagccacgctaaagataacaacttaa 17737842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 34858208 - 34858147
Alignment:
Q  142 ctgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagacatcaacttaa 203  Q
    |||||| ||||||||||| ||  ||||||||||||||| ||| |||||||||| || |||||    
T  34858208 ctgagtcccaaaaacaaaggtagcttttttagctttcaaccaacctagagacaacagcttaa 34858147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 4406600 - 4406689
Alignment:
Q  105 ctatgcccaaacatgctaaagggctcaactatcaagtctgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagaca 194  Q
    ||||||||||||| |||||||||||| |||| ||  |||||||||||||| |||| ||| |||| |||||||||| ||| |||| |||||    
T  4406600 ctatgcccaaacaagctaaagggctcgactaccacctctgagtaccaaaaccaaatgtggctttcttagctttcagccaacctaaagaca 4406689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 8873340 - 8873279
Alignment:
Q  143 tgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagacatcaacttaac 204  Q
    ||||| ||||||||||| ||  ||||||||||||||| ||| |||| |||||||||||||||    
T  8873340 tgagttccaaaaacaaaggtagcttttttagctttcagccaacctaaagacatcaacttaac 8873279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 23347981 - 23347920
Alignment:
Q  142 ctgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagacatcaacttaa 203  Q
    |||||| ||||||||||| ||  ||||||||||||||| ||| |||||||||| ||||||||    
T  23347981 ctgagtcccaaaaacaaaggtagcttttttagctttcaaccaacctagagacaacaacttaa 23347920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 15673450 - 15673511
Alignment:
Q  142 ctgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagacatcaacttaa 203  Q
    |||||| ||||||||||| ||  ||||||||||||||| ||| |||||||||| || |||||    
T  15673450 ctgagtcccaaaaacaaaggtagcttttttagctttcaaccaacctagagacagcagcttaa 15673511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 13755090 - 13755142
Alignment:
Q  142 ctgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagaca 194  Q
    |||||| ||||||||||| ||  ||||||||||||||| ||| ||||||||||    
T  13755090 ctgagtcccaaaaacaaaggtagcttttttagctttcaaccaacctagagaca 13755142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.00000000008; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 204
Target Start/End: Original strand, 37530189 - 37530251
Alignment:
Q  142 ctgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagacatcaacttaac 204  Q
    |||||| ||||||||||| ||  ||||||||||||||| ||| |||| |||||||||||||||    
T  37530189 ctgagttccaaaaacaaaggtagcttttttagctttcagccaacctaaagacatcaacttaac 37530251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 204
Target Start/End: Complemental strand, 48073947 - 48073885
Alignment:
Q  142 ctgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagacatcaacttaac 204  Q
    |||||| ||||||||||| ||  ||||||||||||||| ||| |||||||||| || ||||||    
T  48073947 ctgagtcccaaaaacaaaggtagcttttttagctttcaaccaacctagagacaacagcttaac 48073885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 3692252 - 3692313
Alignment:
Q  142 ctgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagacatcaacttaa 203  Q
    |||||| ||||||||||| ||  ||||||||||||||| ||| |||||||||| || |||||    
T  3692252 ctgagtcccaaaaacaaaggtagcttttttagctttcaaccaacctagagacagcagcttaa 3692313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 32353812 - 32353751
Alignment:
Q  142 ctgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagacatcaacttaa 203  Q
    |||||| ||||||||||| ||  ||||||||||||||| ||| |||||||||| || |||||    
T  32353812 ctgagtcccaaaaacaaaggtagcttttttagctttcaaccaacctagagacaacagcttaa 32353751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 55298248 - 55298309
Alignment:
Q  142 ctgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagacatcaacttaa 203  Q
    |||||| ||||||||||| ||  ||||||||||||||| ||| |||||||||| ||||||||    
T  55298248 ctgagtcccaaaaacaaaggtagcttttttagctttcaaccaacctagagacaacaacttaa 55298309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 8487496 - 8487435
Alignment:
Q  142 ctgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagacatcaacttaa 203  Q
    |||||| ||||||||||| ||  ||||||||||||||| ||| |||||||||| || |||||    
T  8487496 ctgagtcccaaaaacaaaggtagcttttttagctttcaaccaacctagagacaacagcttaa 8487435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 23873991 - 23873930
Alignment:
Q  142 ctgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagacatcaacttaa 203  Q
    |||||| ||||||||||| ||  ||||||||||||||| ||| |||||||||| || |||||    
T  23873991 ctgagtcccaaaaacaaaggtagcttttttagctttcaaccaacctagagacaacagcttaa 23873930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 33313024 - 33313085
Alignment:
Q  142 ctgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagacatcaacttaa 203  Q
    |||||| |||||||||||||| ||||||||| |||||| ||| |||| ||||| || |||||    
T  33313024 ctgagtcccaaaaacaaaagtaacttttttaactttcaaccaacctaaagacagcagcttaa 33313085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000003; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 2814015 - 2813954
Alignment:
Q  142 ctgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagacatcaacttaa 203  Q
    |||||| ||||||||||| ||  ||||||||||||||| ||| |||||||||| ||||||||    
T  2814015 ctgagtcccaaaaacaaaggtagcttttttagctttcaaccaacctagagacaacaacttaa 2813954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 7146666 - 7146727
Alignment:
Q  142 ctgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagacatcaacttaa 203  Q
    |||||| ||||||||||| ||  ||||||||||||||| ||| ||||||||||||| |||||    
T  7146666 ctgagtcccaaaaacaaaggtagcttttttagctttcaaccaacctagagacatcagcttaa 7146727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 24227440 - 24227507
Alignment:
Q  142 ctgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagacatcaacttaactttgt 209  Q
    |||||||| |||||||||||| | |||||||||||||| ||| ||||  |||| || |||||||||||    
T  24227440 ctgagtactaaaaacaaaagtaatttttttagctttcaaccaacctaacgacaacatcttaactttgt 24227507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 204
Target Start/End: Complemental strand, 25873627 - 25873565
Alignment:
Q  142 ctgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagacatcaacttaac 204  Q
    |||||| |||||||||||  |  ||||||||||||||| ||| |||| |||||||||||||||    
T  25873627 ctgagttccaaaaacaaagatagcttttttagctttcagccaacctaaagacatcaacttaac 25873565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 6176993 - 6176932
Alignment:
Q  142 ctgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagacatcaacttaa 203  Q
    |||||| ||||||||||| ||  ||||||||||||||| ||| |||||||||| || |||||    
T  6176993 ctgagtcccaaaaacaaaggtagcttttttagctttcaaccaacctagagacaacagcttaa 6176932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 29309032 - 29309093
Alignment:
Q  142 ctgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagacatcaacttaa 203  Q
    |||||| ||||||||||| ||  ||||||||||||||| ||| |||||||||| || |||||    
T  29309032 ctgagtcccaaaaacaaaggtagcttttttagctttcaaccaacctagagacagcagcttaa 29309093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 204
Target Start/End: Original strand, 13439678 - 13439740
Alignment:
Q  142 ctgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagacatcaacttaac 204  Q
    |||||| ||||||||||| ||  ||||||||||||||| ||| |||||||||| || ||||||    
T  13439678 ctgagtcccaaaaacaaaggtagcttttttagctttcaaccaacctagagacaacagcttaac 13439740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 19728111 - 19728173
Alignment:
Q  141 tctgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagacatcaacttaa 203  Q
    ||||||| ||||||||||||||| | ||||||||||||| |||| ||| ||| | ||||||||    
T  19728111 tctgagttccaaaaacaaaagtggcatttttagctttcagccacgctaaagataacaacttaa 19728173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 31; Significance: 0.00000002; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 204
Target Start/End: Original strand, 31594179 - 31594241
Alignment:
Q  142 ctgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagacatcaacttaac 204  Q
    |||||| ||||||||||| ||  ||||||||||||||| ||| |||| ||||||||| |||||    
T  31594179 ctgagttccaaaaacaaaggtagcttttttagctttcagccaacctaaagacatcaatttaac 31594241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 204
Target Start/End: Original strand, 33547497 - 33547559
Alignment:
Q  142 ctgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagacatcaacttaac 204  Q
    |||||| ||||||||||| ||  ||||||||||||||| ||| |||||||||| || ||||||    
T  33547497 ctgagtcccaaaaacaaaggtagcttttttagctttcaaccaacctagagacaacagcttaac 33547559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 22052252 - 22052313
Alignment:
Q  142 ctgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagacatcaacttaa 203  Q
    |||||| ||||||||||||||  ||||||||||||| | ||| |||| ||||| ||||||||    
T  22052252 ctgagttccaaaaacaaaagtagcttttttagctttaagccaacctaaagacaacaacttaa 22052313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 26490800 - 26490731
Alignment:
Q  110 cccaaacatgctaaagggctcaactatcaagtctgagtaccaaaaacaaaagtgacttttttagctttca 179  Q
    |||||||| || ||||||||  |||| ||  ||||||||||||| |||||  ||||||||||||||||||    
T  26490800 cccaaacaagccaaagggcttgactaccacttctgagtaccaaatacaaacatgacttttttagctttca 26490731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 26681507 - 26681568
Alignment:
Q  143 tgagtaccaaaaacaaaagtgacttttttagctttcacccaccctagagacatcaacttaac 204  Q
    ||||| ||||||||||| ||  ||||||||||||||| ||| |||| ||||| |||||||||    
T  26681507 tgagttccaaaaacaaaggtagcttttttagctttcagccaacctaaagacaacaacttaac 26681568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University