View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1837_low_1 (Length: 984)

Name: NF1837_low_1
Description: NF1837
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1837_low_1
NF1837_low_1
[»] chr1 (25 HSPs)
chr1 (12-946)||(41983390-41984328)
chr1 (465-536)||(20725982-20726053)
chr1 (466-544)||(18032287-18032365)
chr1 (462-544)||(44410708-44410790)
chr1 (466-543)||(33690159-33690236)
chr1 (466-534)||(24638702-24638770)
chr1 (466-544)||(962520-962598)
chr1 (466-547)||(42866278-42866359)
chr1 (466-547)||(44257770-44257851)
chr1 (466-544)||(3252226-3252304)
chr1 (466-547)||(3355400-3355481)
chr1 (466-547)||(28234799-28234880)
chr1 (466-547)||(37034900-37034981)
chr1 (460-536)||(49241636-49241712)
chr1 (243-330)||(41986125-41986212)
chr1 (464-546)||(45193222-45193304)
chr1 (466-547)||(3014194-3014274)
chr1 (466-538)||(50323330-50323402)
chr1 (464-535)||(9293640-9293711)
chr1 (465-536)||(32364120-32364191)
chr1 (466-536)||(1846928-1846998)
chr1 (465-547)||(20117866-20117948)
chr1 (466-516)||(46535319-46535369)
chr1 (464-544)||(28281974-28282054)
chr1 (468-533)||(40960248-40960313)
[»] chr3 (26 HSPs)
chr3 (465-544)||(35054734-35054813)
chr3 (463-547)||(2849287-2849370)
chr3 (466-544)||(42217186-42217264)
chr3 (464-547)||(30465108-30465191)
chr3 (461-547)||(37599895-37599981)
chr3 (465-547)||(39850694-39850776)
chr3 (466-536)||(51537222-51537292)
chr3 (466-535)||(10259228-10259297)
chr3 (466-543)||(53351171-53351248)
chr3 (466-547)||(55258106-55258187)
chr3 (467-547)||(11412514-11412594)
chr3 (465-544)||(29727736-29727815)
chr3 (466-537)||(41462386-41462457)
chr3 (466-544)||(15100604-15100682)
chr3 (466-547)||(29025259-29025340)
chr3 (466-547)||(42907769-42907850)
chr3 (464-547)||(23241884-23241967)
chr3 (466-547)||(11574994-11575075)
chr3 (466-547)||(33634883-33634964)
chr3 (466-536)||(11676264-11676333)
chr3 (466-536)||(53724061-53724131)
chr3 (465-548)||(27002521-27002604)
chr3 (466-500)||(11018705-11018739)
chr3 (466-500)||(44201109-44201143)
chr3 (466-516)||(52404395-52404445)
chr3 (462-495)||(26725548-26725581)
[»] chr8 (22 HSPs)
chr8 (466-536)||(32493218-32493288)
chr8 (464-547)||(19726735-19726818)
chr8 (466-548)||(36833904-36833986)
chr8 (466-547)||(42063462-42063543)
chr8 (466-547)||(40485575-40485656)
chr8 (466-547)||(41726380-41726461)
chr8 (464-547)||(3655855-3655938)
chr8 (465-547)||(597233-597315)
chr8 (466-544)||(20821821-20821899)
chr8 (466-547)||(30360455-30360536)
chr8 (464-516)||(18656677-18656729)
chr8 (466-547)||(8014943-8015024)
chr8 (466-547)||(14910095-14910176)
chr8 (466-547)||(31008557-31008638)
chr8 (467-547)||(44056524-44056604)
chr8 (465-544)||(26403649-26403728)
chr8 (465-544)||(36823467-36823546)
chr8 (466-535)||(11031030-11031099)
chr8 (475-544)||(28761706-28761775)
chr8 (466-516)||(4455400-4455450)
chr8 (466-500)||(36658515-36658549)
chr8 (466-547)||(13487172-13487252)
[»] chr5 (19 HSPs)
chr5 (468-544)||(13956932-13957008)
chr5 (466-536)||(6459707-6459777)
chr5 (465-546)||(14351961-14352042)
chr5 (466-547)||(35758035-35758116)
chr5 (464-544)||(6273126-6273206)
chr5 (466-547)||(8761116-8761197)
chr5 (466-547)||(36745889-36745970)
chr5 (466-547)||(38040623-38040704)
chr5 (466-547)||(40143904-40143985)
chr5 (460-547)||(27194794-27194881)
chr5 (466-536)||(18942249-18942319)
chr5 (466-548)||(29823257-29823339)
chr5 (466-547)||(14635345-14635426)
chr5 (466-547)||(32383910-32383991)
chr5 (466-547)||(3752454-3752535)
chr5 (466-516)||(389707-389757)
chr5 (466-536)||(814806-814876)
chr5 (466-544)||(35456507-35456585)
chr5 (466-499)||(17421303-17421336)
[»] scaffold0231 (1 HSPs)
scaffold0231 (460-547)||(11055-11142)
[»] chr4 (19 HSPs)
chr4 (466-548)||(12704677-12704759)
chr4 (466-547)||(25232693-25232774)
chr4 (466-544)||(4414415-4414493)
chr4 (466-547)||(8132791-8132872)
chr4 (466-547)||(11792384-11792465)
chr4 (463-547)||(23611559-23611643)
chr4 (466-544)||(44352087-44352165)
chr4 (466-544)||(54822047-54822125)
chr4 (466-547)||(1936529-1936610)
chr4 (466-533)||(29695468-29695535)
chr4 (464-547)||(55675418-55675501)
chr4 (466-547)||(24394073-24394154)
chr4 (465-544)||(6354995-6355074)
chr4 (466-547)||(26203699-26203780)
chr4 (465-548)||(28359696-28359779)
chr4 (466-536)||(19916464-19916534)
chr4 (464-542)||(43245743-43245821)
chr4 (466-544)||(38519287-38519365)
chr4 (466-516)||(55497461-55497511)
[»] chr7 (22 HSPs)
chr7 (466-547)||(36858133-36858214)
chr7 (465-547)||(11734264-11734346)
chr7 (466-544)||(34259299-34259377)
chr7 (466-544)||(46170641-46170719)
chr7 (466-547)||(14801982-14802063)
chr7 (466-547)||(15248974-15249055)
chr7 (466-547)||(16217027-16217108)
chr7 (465-536)||(10992749-10992820)
chr7 (466-548)||(1582155-1582237)
chr7 (466-544)||(31813488-31813566)
chr7 (466-547)||(36099710-36099791)
chr7 (466-547)||(45269472-45269553)
chr7 (468-544)||(5418899-5418975)
chr7 (467-547)||(10198308-10198388)
chr7 (464-547)||(24096742-24096825)
chr7 (466-547)||(9822519-9822600)
chr7 (466-547)||(10724444-10724525)
chr7 (466-547)||(29983235-29983316)
chr7 (466-547)||(34191925-34192006)
chr7 (466-547)||(44605954-44606035)
chr7 (468-547)||(33628281-33628360)
chr7 (466-547)||(33610590-33610671)
[»] chr6 (10 HSPs)
chr6 (466-543)||(30269593-30269670)
chr6 (466-544)||(6817290-6817368)
chr6 (466-547)||(23595691-23595772)
chr6 (466-547)||(24068219-24068300)
chr6 (466-516)||(22351297-22351347)
chr6 (466-516)||(29419813-29419863)
chr6 (466-547)||(21289551-21289631)
chr6 (464-536)||(8464279-8464351)
chr6 (466-536)||(30426318-30426388)
chr6 (468-547)||(31513395-31513474)
[»] chr2 (23 HSPs)
chr2 (466-547)||(35305318-35305399)
chr2 (465-547)||(3988704-3988786)
chr2 (466-547)||(17513020-17513101)
chr2 (465-547)||(7153436-7153517)
chr2 (466-544)||(16106740-16106818)
chr2 (466-536)||(16457781-16457851)
chr2 (465-547)||(24128752-24128834)
chr2 (466-547)||(23293208-23293289)
chr2 (464-547)||(6065533-6065616)
chr2 (466-544)||(37484403-37484481)
chr2 (825-933)||(13016163-13016276)
chr2 (466-547)||(19881939-19882020)
chr2 (466-547)||(32878736-32878817)
chr2 (466-545)||(10810582-10810661)
chr2 (466-533)||(21800719-21800786)
chr2 (466-516)||(29523936-29523986)
chr2 (466-543)||(18540658-18540735)
chr2 (466-547)||(39678304-39678385)
chr2 (466-536)||(22315224-22315294)
chr2 (466-544)||(37254859-37254937)
chr2 (466-516)||(37314987-37315037)
chr2 (466-547)||(20907071-20907152)
chr2 (466-547)||(23250969-23251050)
[»] scaffold0036 (1 HSPs)
scaffold0036 (464-547)||(51907-51990)
[»] scaffold0070 (1 HSPs)
scaffold0070 (465-547)||(12720-12802)
[»] scaffold0043 (1 HSPs)
scaffold0043 (466-544)||(64345-64423)
[»] scaffold0116 (1 HSPs)
scaffold0116 (466-543)||(7839-7916)
[»] scaffold0242 (1 HSPs)
scaffold0242 (465-547)||(17874-17956)
[»] scaffold0712 (1 HSPs)
scaffold0712 (466-543)||(4954-5030)
[»] scaffold0709 (1 HSPs)
scaffold0709 (466-543)||(4974-5050)


Alignment Details
Target: chr1 (Bit Score: 772; Significance: 0; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 772; E-Value: 0
Query Start/End: Original strand, 12 - 946
Target Start/End: Complemental strand, 41984328 - 41983390
Alignment:
Q  12 catcatctatagtttttaacaaggccttcactaatgttgatttcactattctgtacttagtaaggatagcaaattaaaaaacaatttctcccaacatgac 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41984328 catcatctatagtttttaacaaggccttcactaatgttgatttcactattctgtacttagtaaggatagcaaattaaaaaacactttctcccaacatgac 41984229  T
Q  112 caattatttcttcatgttactggactgnnnnnnncctaattcacaaatgctgtattaatcaccctaaccatatatgtgcctatattactacaataaggaa 211  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  41984228 caattatttcttcatgttactggactgtttttttcctaattcacaaatgctgtattaatcaccctaaccatatatgtgcctatattactataataaagaa 41984129  T
Q  212 aaatgtgatgtaaaagg-aggtaattagaattaaatgtgtgattgaaatttgagccgtttaatcttgattggacactccgcaatgctcgactgcatcaaa 310  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41984128 aaatgtgatgtaaaagggaggtaattagagttaaatgtgtgattgaaatttgagccgtttaatcttgattggacactccgcaatgctcgactgcatcaaa 41984029  T
Q  311 agtggaccctgattccctacggtctaggaatcattttgttctgtagtaggtgcatttgagaccatttgattaaaatgtgacaattaagagtttaagttgg 410  Q
    ||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  41984028 agtggacccggattccctacggtctaggaatcatgtcgttctgtagtaggtgcatttgtgaccatttgattaaaatgtgacaattaagagtttaagttgg 41983929  T
Q  411 caaataaataaataaaaacattgtaatccattgattaaaaccagatgactaagatcatagttttaaaactcggcgcggtcatcgactcggcatggatact 510  Q
    ||||||||||||  |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||| |||||| ||||    
T  41983928 caaataaataaa--aaaacattgtaaaccattgattaaaaccaaatgactaagatcatagttttaaaactcggctcggtcatcaactcagcatgggtact 41983831  T
Q  511 gggtcagtgagttaatggtcgaaccattgagtcattgaaacttaattaaccctattaataataggtgttaaaaagtgcagcaagttattctcattgaaac 610  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41983830 gagtcagtgagttaatggtcgaaccattgagtcattgaaacttaattaaccctattaataataggtgttaaaaagtgcagcaagttattctcattgaaac 41983731  T
Q  611 aaaaatgacgctagttaataataaatcactat--gaactgtttgtgtttttatgaagatgaattttataatcatgaaccatgg---cagtgcatgtatgg 705  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||    
T  41983730 aaaaatgacgctagttaataataaatcactatcagaactgtttgtgtttttatgaagatgaattttataatcatgaaccatggtggcagtgcatgtatgg 41983631  T
Q  706 taggaaaacataaccggaagtgaagactcaagggaacatacataattaatgtagagaaggtagggatatatctgtaatttgaaaaataatttaatcgagg 805  Q
    || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  41983630 tacgaaaacataactggaagtgaagactcaagggaacatacataattaatgtagagaaggtagggatatatttgtaatttgaaaaataatttaatcgagg 41983531  T
Q  806 attctaactcattccacataaattggagggtaagcaaaatgagaatcagtgatagaatacatgctattgagttccatcccacctttataatgacaatcca 905  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| || |||| ||||||||    
T  41983530 attctaactcattccacataaattggagggtaagcaaaatgagaatcagggatggaatacatgctattgagttccatcccacccttgtaattacaatcca 41983431  T
Q  906 aacaataaaatcttaatttattccattctatcacatatcat 946  Q
    |||||||||||||||||||||||||||| ||| ||| ||||    
T  41983430 aacaataaaatcttaatttattccattccatcccatttcat 41983390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 465 - 536
Target Start/End: Original strand, 20725982 - 20726053
Alignment:
Q  465 tcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaacca 536  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  20725982 tcatagttttaaaactcggctcggtcatcgactcgacatggatactgggtcaatgagttaatggtcgaacca 20726053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 466 - 544
Target Start/End: Original strand, 18032287 - 18032365
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    ||||||||||||||||||| ||||| |||||||||||||| |||||| ||| ||||||||||||||||||| |||||||    
T  18032287 catagttttaaaactcggctcggtcgtcgactcggcatgggtactggatcaatgagttaatggtcgaaccactgagtca 18032365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 44410708 - 44410790
Alignment:
Q  462 agatcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    ||||||||||||||||||||||  ||||||||||||||||| || |||||||||| || |||||||||||||||| |||||||    
T  44410708 agatcatagttttaaaactcggttcggtcatcgactcggcaagggtactgggtcactgggttaatggtcgaaccactgagtca 44410790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 466 - 543
Target Start/End: Original strand, 33690159 - 33690236
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtc 543  Q
    ||||||||||||||||||| ||||||||||||||||| || |||||||||| || |||||||||||||||| ||||||    
T  33690159 catagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcattgggttaatggtcgaaccactgagtc 33690236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 466 - 534
Target Start/End: Original strand, 24638702 - 24638770
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaac 534  Q
    |||||||||||||||| || |||||||||||||||||||| || |||||||||||||||||||||||||    
T  24638702 catagttttaaaactcagctcggtcatcgactcggcatgggtagtgggtcagtgagttaatggtcgaac 24638770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 466 - 544
Target Start/End: Complemental strand, 962598 - 962520
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    ||||||||||||||||||| |||||||||||||||||| | |||| ||||| | ||||||||||||||||| |||||||    
T  962598 catagttttaaaactcggctcggtcatcgactcggcataggtactaggtcaataagttaatggtcgaaccactgagtca 962520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 42866278 - 42866359
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| ||||||||||||||||  || |||||||||| || || ||||||||||||| ||||||||||    
T  42866278 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattg 42866359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 44257770 - 44257851
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| ||||||||||||||||  || |||||||||| ||||| |||||||||||||  |||||||||    
T  44257770 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgagtcaatggtcgaaccaccgagtcattg 44257851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 466 - 544
Target Start/End: Original strand, 3252226 - 3252304
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    ||||||||||||||||||| ||||||||||||||| |  | |||||||||| |||||||||||| |||||| |||||||    
T  3252226 catagttttaaaactcggctcggtcatcgactcggtagaggtactgggtcactgagttaatggttgaaccactgagtca 3252304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 3355400 - 3355481
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||| ||||| ||||||||||||||||  ||||||||||||| || || |||||||||| || ||||||||||    
T  3355400 catagttttaaaattcggctcggtcatcgactcggcggggatactgggtcaatgggtcaatggtcgaatcactgagtcattg 3355481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 28234799 - 28234880
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| ||||||| ||||||||  || |||||||||| || || ||||||||||||| ||||||||||    
T  28234799 catagttttaaaactcggctcggtcattgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattg 28234880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 466 - 547
Target Start/End: Complemental strand, 37034981 - 37034900
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| || ||||||||||||||||| |||||||| | || || ||||||||||||| || |||||||    
T  37034981 catagttttaaaactcggctcgatcatcgactcggcatgggtactgggttactgggtcaatggtcgaaccactgggtcattg 37034900  T

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Target: chr1; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 460 - 536
Target Start/End: Original strand, 49241636 - 49241712
Alignment:
Q  460 taagatcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaacca 536  Q
    ||||||||||||||||||| ||||| |||||||||| ||| || ||||||||| ||| || ||||||||||||||||    
T  49241636 taagatcatagttttaaaattcggctcggtcatcgattcgacagggatactggatcattgggttaatggtcgaacca 49241712  T

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Target: chr1; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 330
Target Start/End: Complemental strand, 41986212 - 41986125
Alignment:
Q  243 aaatgtgtgattgaaatttgagccgtttaatcttgattggacactccgcaatgctcgactgcatcaaaagtggaccctgattccctac 330  Q
    |||||| ||||||||||||| || || |||||||||||| || ||||  ||||||||||||| |||||||||||||| ||||| ||||    
T  41986212 aaatgtctgattgaaatttgggcggtctaatcttgattgaacgctccataatgctcgactgcgtcaaaagtggacccggattctctac 41986125  T

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Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 464 - 546
Target Start/End: Complemental strand, 45193304 - 45193222
Alignment:
Q  464 atcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcatt 546  Q
    ||||||||||||||||||||| || |||||||||||||| || | |||||||| || || | ||||||||||| ||| |||||    
T  45193304 atcatagttttaaaactcggctcgatcatcgactcggcaagggtgctgggtcactgggtcattggtcgaaccactgaatcatt 45193222  T

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Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 466 - 547
Target Start/End: Complemental strand, 3014274 - 3014194
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||| | || | |||||||||||| || |||||||||| ||  ||||||||||||||| ||||||||||    
T  3014274 catagttttaaaactcgtctcgtt-atcgactcggcaggggtactgggtcactggattaatggtcgaaccactgagtcattg 3014194  T

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Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 466 - 538
Target Start/End: Original strand, 50323330 - 50323402
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccatt 538  Q
    ||||||||||||||||||  ||||  ||||||||| | ||||||||||||| || |||| |||||||||||||    
T  50323330 catagttttaaaactcggttcggttgtcgactcggtaaggatactgggtcactgggttattggtcgaaccatt 50323402  T

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Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 464 - 535
Target Start/End: Original strand, 9293640 - 9293711
Alignment:
Q  464 atcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaacc 535  Q
    ||||||||||||||||||||| || ||||||||||| |  || |||||||||| || || ||||||||||||    
T  9293640 atcatagttttaaaactcggctcgatcatcgactcgacgggggtactgggtcaatgggtcaatggtcgaacc 9293711  T

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Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 465 - 536
Target Start/End: Original strand, 32364120 - 32364191
Alignment:
Q  465 tcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaacca 536  Q
    |||||||||||||| ||||| |||||||||||||| || || || ||||||  || ||||||||||||||||    
T  32364120 tcatagttttaaaattcggctcggtcatcgactcgacaggggtattgggtcgctgggttaatggtcgaacca 32364191  T

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Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 466 - 536
Target Start/End: Complemental strand, 1846998 - 1846928
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaacca 536  Q
    ||||||||||||||||||| || |||||||||||||   | |||||||| | || ||||||||||||||||    
T  1846998 catagttttaaaactcggctcgatcatcgactcggcggaggtactgggttaatgggttaatggtcgaacca 1846928  T

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Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 465 - 547
Target Start/End: Complemental strand, 20117948 - 20117866
Alignment:
Q  465 tcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||   ||| |||||||| |||||| | |||||||| |||| || || ||||||||||||||||||| ||||    
T  20117948 tcatagttttaaaaactggctcggtcatcaactcggtagggatactgagtcattgggtcaatggtcgaaccattgagttattg 20117866  T

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Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 466 - 516
Target Start/End: Complemental strand, 46535369 - 46535319
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtca 516  Q
    ||||||||||||||||||| ||||||||||||||||  || ||||||||||    
T  46535369 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtca 46535319  T

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Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 464 - 544
Target Start/End: Original strand, 28281974 - 28282054
Alignment:
Q  464 atcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    ||||||||||||||||||||  ||||||| |||||||   || |||||||||| ||||| | |||| ||||||||| ||||    
T  28281974 atcatagttttaaaactcggaccggtcattgactcggtgaggttactgggtcactgagtcattggttgaaccattgggtca 28282054  T

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Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 468 - 533
Target Start/End: Complemental strand, 40960313 - 40960248
Alignment:
Q  468 tagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaa 533  Q
    ||||||||||| || |  ||||||||||||| ||| ||||| |||||||  |||||||||||||||    
T  40960313 tagttttaaaattcagttcggtcatcgactcagcagggatattgggtcaacgagttaatggtcgaa 40960248  T

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Target: chr3 (Bit Score: 68; Significance: 7e-30; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 465 - 544
Target Start/End: Complemental strand, 35054813 - 35054734
Alignment:
Q  465 tcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  35054813 tcatagttttaaaactcggctcggtcatcgactcggcatgggtactgggtcagtgagttaatggtcgaaccattgggtca 35054734  T

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Target: chr3; HSP #2
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 463 - 547
Target Start/End: Complemental strand, 2849370 - 2849287
Alignment:
Q  463 gatcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    |||||||||||||||||||||| |||||||||||||||   ||||||||||||| || ||||||||||||| |||||||||||||    
T  2849370 gatcatagttttaaaactcggctcggtcatcgactcgg-tgggatactgggtcaatgggttaatggtcgaatcattgagtcattg 2849287  T

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Target: chr3; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 466 - 544
Target Start/End: Complemental strand, 42217264 - 42217186
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    ||||||||||||||||||| ||||||||||||||| |  | |||||||||| ||||||||||||||||||| |||||||    
T  42217264 catagttttaaaactcggctcggtcatcgactcggtaaaggtactgggtcattgagttaatggtcgaaccactgagtca 42217186  T

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Target: chr3; HSP #4
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 464 - 547
Target Start/End: Complemental strand, 30465191 - 30465108
Alignment:
Q  464 atcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||| ||||| ||||||||||||||||  || |||||||||| || || ||||||||||||| ||||||||||    
T  30465191 atcatagttttaaaattcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattg 30465108  T

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Target: chr3; HSP #5
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 461 - 547
Target Start/End: Complemental strand, 37599981 - 37599895
Alignment:
Q  461 aagatcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    |||||||||||||||||||||||| |||||||||||| |||  || |||||||||| ||  | ||||||||||||| ||||||||||    
T  37599981 aagatcatagttttaaaactcggctcggtcatcgacttggcgggggtactgggtcaatggatcaatggtcgaaccactgagtcattg 37599895  T

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Target: chr3; HSP #6
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 465 - 547
Target Start/End: Original strand, 39850694 - 39850776
Alignment:
Q  465 tcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    |||||||||||||||||||| ||||||||||||||||  || |||| ||||| || || ||||||||||||| ||||||||||    
T  39850694 tcatagttttaaaactcggctcggtcatcgactcggcgggggtactaggtcaatgggtcaatggtcgaaccactgagtcattg 39850776  T

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Target: chr3; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 466 - 536
Target Start/End: Complemental strand, 51537292 - 51537222
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaacca 536  Q
    ||||||||||||||||||| ||||||||||||||||| || || ||||||| || ||||||||||||||||    
T  51537292 catagttttaaaactcggctcggtcatcgactcggcaggggtattgggtcactgggttaatggtcgaacca 51537222  T

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Target: chr3; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 466 - 535
Target Start/End: Complemental strand, 10259297 - 10259228
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaacc 535  Q
    ||||||||||||||||||| ||||||||||||||||  || |||||||||| || |||||||||||||||    
T  10259297 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggttaatggtcgaacc 10259228  T

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Target: chr3; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 466 - 543
Target Start/End: Original strand, 53351171 - 53351248
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtc 543  Q
    ||||||||||||||||||| ||||||||||||||||| || |||||||||| |  ||||||||| |||||| ||||||    
T  53351171 catagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcattaggttaatggttgaaccactgagtc 53351248  T

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Target: chr3; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 466 - 547
Target Start/End: Complemental strand, 55258187 - 55258106
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| |||||||||||||||   || |||||||||| || || ||||||||||||| ||||||||||    
T  55258187 catagttttaaaactcggctcggtcatcgactcggtgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattg 55258106  T

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Target: chr3; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 467 - 547
Target Start/End: Complemental strand, 11412594 - 11412514
Alignment:
Q  467 atagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    |||||||||||||||||| ||||||||||||||||| || || ||||||| || || | ||||||||||| ||||||||||    
T  11412594 atagttttaaaactcggctcggtcatcgactcggcaagggtattgggtcactgggtcattggtcgaaccactgagtcattg 11412514  T

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Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 465 - 544
Target Start/End: Original strand, 29727736 - 29727815
Alignment:
Q  465 tcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    |||||||||||||||||||| |||||||||| |||||| || || ||||||| || ||||||||| |||||| |||||||    
T  29727736 tcatagttttaaaactcggctcggtcatcgattcggcaggggtattgggtcattgggttaatggttgaaccactgagtca 29727815  T

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Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 466 - 537
Target Start/End: Complemental strand, 41462457 - 41462386
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccat 537  Q
    ||||||||||||||||||| |||||||||||||| ||| | |||||||||| |||||  |||||||||||||    
T  41462457 catagttttaaaactcggctcggtcatcgactcgacataggtactgggtcactgagtcgatggtcgaaccat 41462386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 466 - 544
Target Start/End: Original strand, 15100604 - 15100682
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    ||||||||||||||||||| || |||||||||||  | ||||| ||||||| || |||||||||||||||| |||||||    
T  15100604 catagttttaaaactcggctcgatcatcgactcgataaggatattgggtcattgggttaatggtcgaaccactgagtca 15100682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 29025259 - 29025340
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    |||||||||||||||| || ||||||||||||||||  || |||||||||| || || |||||| |||||| ||||||||||    
T  29025259 catagttttaaaactcagctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggttgaaccagtgagtcattg 29025340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 42907769 - 42907850
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| ||||  ||||||||||| ||  ||||||||| |  |||||||||||||||| ||||||||||    
T  42907769 catagttttaaaactcggctcggttgtcgactcggcaggggcactgggtcattaggttaatggtcgaaccactgagtcattg 42907850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 464 - 547
Target Start/End: Complemental strand, 23241967 - 23241884
Alignment:
Q  464 atcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||| ||||| ||||||||||||||||  || || ||||||| || || ||||||||||||| ||| ||||||    
T  23241967 atcatagttttaaaattcggctcggtcatcgactcggcgggggtattgggtcaatgggtcaatggtcgaaccactgaatcattg 23241884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 11574994 - 11575075
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||| | || ||||||||||||||| | |||||||||| ||| |  ||||||||||||| | |||||||    
T  11574994 catagttttaaaactcgactcgatcatcgactcggcataggtactgggtcattgaatcgatggtcgaaccatcgggtcattg 11575075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 33634883 - 33634964
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||  || |||||||||||||  || |||||||| | || || ||||||||||||| ||||||||||    
T  33634883 catagttttaaaactcggttcgatcatcgactcggcgggggtactgggttaatgggtcaatggtcgaaccactgagtcattg 33634964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 466 - 536
Target Start/End: Complemental strand, 11676333 - 11676264
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaacca 536  Q
    ||||||||||||||| ||| ||||||||||||||||  || |||||||||| || || |||||||||||||    
T  11676333 catagttttaaaacttggctcggtcatcgactcggc-ggggtactgggtcaatgggtcaatggtcgaacca 11676264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 466 - 536
Target Start/End: Original strand, 53724061 - 53724131
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaacca 536  Q
    |||||||||||||||||||  |||||||| |||| |   | |||||||||| |||||||||||||||||||    
T  53724061 catagttttaaaactcggcttggtcatcgcctcgaccacggtactgggtcaatgagttaatggtcgaacca 53724131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 548
Target Start/End: Original strand, 27002521 - 27002604
Alignment:
Q  465 tcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattga 548  Q
    |||||||||||||||||||| ||| ||| ||||||||| || ||||| |||| || || |||||| |||| ||||  |||||||    
T  27002521 tcatagttttaaaactcggctcggacattgactcggcaagggtactgagtcactgggtcaatggttgaactattggatcattga 27002604  T

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Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 466 - 500
Target Start/End: Original strand, 11018705 - 11018739
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcgg 500  Q
    ||||||||||||||||||| |||||||||||||||    
T  11018705 catagttttaaaactcggctcggtcatcgactcgg 11018739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 466 - 500
Target Start/End: Original strand, 44201109 - 44201143
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcgg 500  Q
    ||||||||||||||||||| |||||||||||||||    
T  44201109 catagttttaaaactcggctcggtcatcgactcgg 44201143  T

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Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 466 - 516
Target Start/End: Complemental strand, 52404445 - 52404395
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtca 516  Q
    ||||||||||||||||| | || |||||||||||| |||| ||||||||||    
T  52404445 catagttttaaaactcgcctcgatcatcgactcggtatgggtactgggtca 52404395  T

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Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 462 - 495
Target Start/End: Original strand, 26725548 - 26725581
Alignment:
Q  462 agatcatagttttaaaactcggcgcggtcatcga 495  Q
    ||||||||||||||||||||||| ||||||||||    
T  26725548 agatcatagttttaaaactcggctcggtcatcga 26725581  T

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Target: chr8 (Bit Score: 59; Significance: 2e-24; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 466 - 536
Target Start/End: Complemental strand, 32493288 - 32493218
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaacca 536  Q
    ||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||    
T  32493288 catagttttaaaactcggctcggtcatcgactcggcatgggtattgggtcagtgagttaatggtcgaacca 32493218  T

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Target: chr8; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 464 - 547
Target Start/End: Complemental strand, 19726818 - 19726735
Alignment:
Q  464 atcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||||| ||||||||||||||||  || |||||||||| || || ||||||||||||| ||||||||||    
T  19726818 atcatagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattg 19726735  T

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Target: chr8; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 466 - 548
Target Start/End: Original strand, 36833904 - 36833986
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattga 548  Q
    ||||||||||||||||||| ||||||||||||||||| || |||||||||| || || ||||||||||||| ||| |||||||    
T  36833904 catagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcattgggtcaatggtcgaaccactgaatcattga 36833986  T

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Target: chr8; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 42063462 - 42063543
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| ||||||||||||||||  || |||||||||| || || ||||||||||||| ||||||||||    
T  42063462 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattg 42063543  T

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Target: chr8; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 466 - 547
Target Start/End: Complemental strand, 40485656 - 40485575
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| ||||||| ||||||||  || |||||||||| || || ||||||||||||| ||||||||||    
T  40485656 catagttttaaaactcggctcggtcattgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattg 40485575  T

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Target: chr8; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 466 - 547
Target Start/End: Complemental strand, 41726461 - 41726380
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| ||||||||||||||||   | |||||||||| || || ||||||||||||| ||||||||||    
T  41726461 catagttttaaaactcggctcggtcatcgactcggcggaggtactgggtcaatgggtcaatggtcgaaccactgagtcattg 41726380  T

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Target: chr8; HSP #7
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 464 - 547
Target Start/End: Original strand, 3655855 - 3655938
Alignment:
Q  464 atcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||| ||||| ||||||||||||||||  ||||||||| ||| ||  | ||||||||||||| ||||||||||    
T  3655855 atcatagttttaaaattcggctcggtcatcgactcggcggggatactggatcaatggatcaatggtcgaaccactgagtcattg 3655938  T

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Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 465 - 547
Target Start/End: Original strand, 597233 - 597315
Alignment:
Q  465 tcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    |||||||||||||| ||||| | ||||||||||||| | ||  ||||| ||| ||||||||||||||||||| ||||||||||    
T  597233 tcatagttttaaaattcggctcagtcatcgactcggtaggggcactggatcattgagttaatggtcgaaccactgagtcattg 597315  T

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Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 466 - 544
Target Start/End: Complemental strand, 20821899 - 20821821
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    ||||||||||||||| |||  || ||||||||||||| |||||||| |||| || |||||||||||||||| |||||||    
T  20821899 catagttttaaaacttggcttggccatcgactcggcaaggatactgagtcactgggttaatggtcgaaccactgagtca 20821821  T

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Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 30360455 - 30360536
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| |||||||||| |||||   | |||||||||| || || ||||||||||||| ||||||||||    
T  30360455 catagttttaaaactcggctcggtcatcgattcggcggaggtactgggtcaatgggtcaatggtcgaaccactgagtcattg 30360536  T

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Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 464 - 516
Target Start/End: Complemental strand, 18656729 - 18656677
Alignment:
Q  464 atcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtca 516  Q
    ||||||||||||||||||||| ||||||||||||||||| || ||||||||||    
T  18656729 atcatagttttaaaactcggctcggtcatcgactcggcaggggtactgggtca 18656677  T

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Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 466 - 547
Target Start/End: Complemental strand, 8015024 - 8014943
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| ||||||| ||||||||  || |||| ||||| ||  | ||||||||||||| ||||||||||    
T  8015024 catagttttaaaactcggctcggtcattgactcggcgggggtactaggtcactggatcaatggtcgaaccagtgagtcattg 8014943  T

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Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 14910095 - 14910176
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| ||||||||||||||||  |  |||||| ||| || || |||| |||||||| ||||||||||    
T  14910095 catagttttaaaactcggctcggtcatcgactcggcgggagtactggatcaatgggtcaatgatcgaaccactgagtcattg 14910176  T

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Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 466 - 547
Target Start/End: Complemental strand, 31008638 - 31008557
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||| ||||  ||||||||||||||||  || ||||| |||| || || ||||||||||||| ||||||||||    
T  31008638 catagttttaaaattcggttcggtcatcgactcggcgggggtactgagtcaatgggtcaatggtcgaaccagtgagtcattg 31008557  T

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Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 467 - 547
Target Start/End: Complemental strand, 44056604 - 44056524
Alignment:
Q  467 atagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||| || || |||||||||||||| || |||||  ||| || || ||||||||||||| ||||||||||    
T  44056604 atagttttaaaactcagctcgatcatcgactcggcaggggtactgaatcactgggtcaatggtcgaaccactgagtcattg 44056524  T

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Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 465 - 544
Target Start/End: Complemental strand, 26403728 - 26403649
Alignment:
Q  465 tcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    ||||| ||||||||||||||  |||||||||||||  | || ||||| |||| |||||||||||| |||||| |||||||    
T  26403728 tcataattttaaaactcggcttggtcatcgactcgataggggtactgtgtcattgagttaatggttgaaccactgagtca 26403649  T

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Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 465 - 544
Target Start/End: Complemental strand, 36823546 - 36823467
Alignment:
Q  465 tcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    |||||||||||||||||||  ||||||| |||||||   || |||||||||| ||||||| |||| ||||||||| ||||    
T  36823546 tcatagttttaaaactcggaccggtcattgactcggtgaggttactgggtcactgagttattggttgaaccattgggtca 36823467  T

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Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 466 - 535
Target Start/End: Original strand, 11031030 - 11031099
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaacc 535  Q
    ||||||||||||||||||  |||||||| ||||||   ||||||||||||| || || ||||||||||||    
T  11031030 catagttttaaaactcggaccggtcatcaactcggtggggatactgggtcactgggtcaatggtcgaacc 11031099  T

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Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 475 - 544
Target Start/End: Complemental strand, 28761775 - 28761706
Alignment:
Q  475 aaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    |||| ||||| ||||||||||||||||| || |||||||| | || || ||||||||||||| |||||||    
T  28761775 aaaattcggctcggtcatcgactcggcaggggtactgggttattgggtcaatggtcgaaccactgagtca 28761706  T

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Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 466 - 516
Target Start/End: Complemental strand, 4455450 - 4455400
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtca 516  Q
    ||||||||||||||| ||| ||| ||||||||||||| || ||||||||||    
T  4455450 catagttttaaaacttggctcggccatcgactcggcaggggtactgggtca 4455400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 466 - 500
Target Start/End: Original strand, 36658515 - 36658549
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcgg 500  Q
    ||||||||||||||||||| |||||||||||||||    
T  36658515 catagttttaaaactcggctcggtcatcgactcgg 36658549  T

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Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 466 - 547
Target Start/End: Complemental strand, 13487252 - 13487172
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||| ||||| |||||||||| |||||  || |||||| ||| ||  | ||||||||||||| ||||||||||    
T  13487252 catagttttaaaattcggctcggtcatcgaatcggc-ggggtactggatcaatggatcaatggtcgaaccactgagtcattg 13487172  T

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Target: chr5 (Bit Score: 57; Significance: 3e-23; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 468 - 544
Target Start/End: Original strand, 13956932 - 13957008
Alignment:
Q  468 tagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    ||||||||||||||||| |||||||||||||||||| | |||||||||| ||||||||||||||||||| |||||||    
T  13956932 tagttttaaaactcggctcggtcatcgactcggcataggtactgggtcaatgagttaatggtcgaaccactgagtca 13957008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 466 - 536
Target Start/End: Original strand, 6459707 - 6459777
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaacca 536  Q
    |||||||||||||||| || ||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  6459707 catagttttaaaactcagctcggtcgtcgactcggcatgggtactgggtcaatgagttaatggtcgaacca 6459777  T

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Target: chr5; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 465 - 546
Target Start/End: Complemental strand, 14352042 - 14351961
Alignment:
Q  465 tcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcatt 546  Q
    |||||||||||||||||||| ||||||||||||||| | ||  | ||| ||||||||||||||||||||||| |||||||||    
T  14352042 tcatagttttaaaactcggctcggtcatcgactcggtaggggcattggatcagtgagttaatggtcgaaccactgagtcatt 14351961  T

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Target: chr5; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 35758035 - 35758116
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| ||||||||||||||||   | ||||||||||||| || ||||||||||||| ||||||||||    
T  35758035 catagttttaaaactcggctcggtcatcgactcggcggaggtactgggtcagtgggtcaatggtcgaaccactgagtcattg 35758116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 464 - 544
Target Start/End: Original strand, 6273126 - 6273206
Alignment:
Q  464 atcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    ||||||||||||||||||||| ||||||||||||||||| ||  ||||||| | || |||||||||||||||| |||||||    
T  6273126 atcatagttttaaaactcggctcggtcatcgactcggcaggggcactgggttattgggttaatggtcgaaccactgagtca 6273206  T

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Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 466 - 547
Target Start/End: Complemental strand, 8761197 - 8761116
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||  ||||||||||||||||  || |||||||||| |  || ||||||||||||| ||||||||||    
T  8761197 catagttttaaaactcggatcggtcatcgactcggcgggggtactgggtcaataggtcaatggtcgaaccactgagtcattg 8761116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 466 - 547
Target Start/End: Complemental strand, 36745970 - 36745889
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| |||||||||| |||||  |  |||||||||| || || ||||||||||||| ||||||||||    
T  36745970 catagttttaaaactcggctcggtcatcgattcggcgggagtactgggtcaatgggtcaatggtcgaaccactgagtcattg 36745889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 38040623 - 38040704
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| |||||||||| |||||   | |||||||||| || || ||||||||||||| ||||||||||    
T  38040623 catagttttaaaactcggctcggtcatcgattcggcggaggtactgggtcaatgggtcaatggtcgaaccactgagtcattg 38040704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 40143904 - 40143985
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| ||||||||||||||||   || |||| |||| || || ||||||||||||| ||||||||||    
T  40143904 catagttttaaaactcggctcggtcatcgactcggcggagaaactgagtcaatgggtcaatggtcgaaccactgagtcattg 40143985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 460 - 547
Target Start/End: Complemental strand, 27194881 - 27194794
Alignment:
Q  460 taagatcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||||||||| ||||||||||||||||  || |||||||| | || || ||| || |||||| || |||||||    
T  27194881 taagatcatagttttaaaactcggctcggtcatcgactcggctggggtactgggttaatgggtcaatagttgaaccactgtgtcattg 27194794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 466 - 536
Target Start/End: Original strand, 18942249 - 18942319
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaacca 536  Q
    ||||||||||||||||||| ||||||||||||||| | || ||| |||||| || || |||||||||||||    
T  18942249 catagttttaaaactcggctcggtcatcgactcggtaggggtaccgggtcactgggtcaatggtcgaacca 18942319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 466 - 548
Target Start/End: Original strand, 29823257 - 29823339
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattga 548  Q
    ||||||||||||| ||||| ||||||||||||||||  || |||||||||| |  || ||||||||||||| ||| |||||||    
T  29823257 catagttttaaaattcggctcggtcatcgactcggcgggggtactgggtcactaggtcaatggtcgaaccagtgaatcattga 29823339  T

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Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 14635345 - 14635426
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||| | | ||||| ||||||||||||||||  || |||||||||| || || ||||||||||||| ||||||||||    
T  14635345 catagttttcagaatcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccagtgagtcattg 14635426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 466 - 547
Target Start/End: Complemental strand, 32383991 - 32383910
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| ||||||||||||||  | ||||||||||||| |  ||||||| | |||||| || |||||||    
T  32383991 catagttttaaaactcggctcggtcatcgactcgatagggatactgggtcactaggttaatgattgaaccactgtgtcattg 32383910  T

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Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 3752454 - 3752535
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||| | | ||||| ||||||||||||||||  || |||||||||| || || |||||||||| || ||||||||||    
T  3752454 catagttttcagaatcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaagcagtgagtcattg 3752535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 466 - 516
Target Start/End: Complemental strand, 389757 - 389707
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtca 516  Q
    ||||||||||||||||||| |||||||||| |||||| || |||| |||||    
T  389757 catagttttaaaactcggctcggtcatcgattcggcaggggtactaggtca 389707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 466 - 536
Target Start/End: Complemental strand, 814876 - 814806
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaacca 536  Q
    |||||||||||||||| |  |||| |||||||||| | ||||||||| ||| || || |||||||||||||    
T  814876 catagttttaaaactcagatcggtgatcgactcggtaaggatactggatcactgggtcaatggtcgaacca 814806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 466 - 544
Target Start/End: Original strand, 35456507 - 35456585
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    ||||||||||||||||||| |||||||| ||| || | || |||||| ||| ||  | ||||||||||||| |||||||    
T  35456507 catagttttaaaactcggctcggtcatcaacttgggaggggtactggttcattggatcaatggtcgaaccactgagtca 35456585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 466 - 499
Target Start/End: Original strand, 17421303 - 17421336
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcg 499  Q
    ||||||||||||||||||| ||||||||||||||    
T  17421303 catagttttaaaactcggctcggtcatcgactcg 17421336  T

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Target: scaffold0231 (Bit Score: 56; Significance: 1e-22; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 460 - 547
Target Start/End: Complemental strand, 11142 - 11055
Alignment:
Q  460 taagatcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||||||||| ||||||||||||||||  || |||||||||| || || ||||||||||||| ||||||||||    
T  11142 taagatcatagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattg 11055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 4e-22; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 466 - 548
Target Start/End: Complemental strand, 12704759 - 12704677
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattga 548  Q
    ||||||||||||||||||| |||||||||||| ||||||| |||||||||| | ||| ||||||||||||| |||||||||||    
T  12704759 catagttttaaaactcggctcggtcatcgactaggcatgggtactgggtcactaagtcaatggtcgaaccactgagtcattga 12704677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 466 - 547
Target Start/End: Complemental strand, 25232774 - 25232693
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| ||||||||||||||||| || |||||||||| || || ||||||||||||| ||||||||||    
T  25232774 catagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcaatgggtcaatggtcgaaccactgagtcattg 25232693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 466 - 544
Target Start/End: Original strand, 4414415 - 4414493
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    ||||||||||||||||||| ||||||||||||||||| || |||||||||| || || ||||||||||||| |||||||    
T  4414415 catagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcactgggtcaatggtcgaaccactgagtca 4414493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 8132791 - 8132872
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| ||||||||||||||| |  | |||||||||| |||||||||||| |||||| ||||||||||    
T  8132791 catagttttaaaactcggctcggtcatcgactcggtagaggtactgggtcactgagttaatggttgaaccactgagtcattg 8132872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 11792384 - 11792465
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| ||||||||||||||||  ||||||||||||| || || ||||||||||||| ||| ||||||    
T  11792384 catagttttaaaactcggctcggtcatcgactcggcggggatactgggtcaatgggtcaatggtcgaaccactgaatcattg 11792465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 463 - 547
Target Start/End: Complemental strand, 23611643 - 23611559
Alignment:
Q  463 gatcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    |||||||||||||||||||||  ||||||||||||||||  ||||||||||| | || || ||||||||||||| ||||||||||    
T  23611643 gatcatagttttaaaactcggttcggtcatcgactcggcggggatactgggttaatgggtcaatggtcgaaccactgagtcattg 23611559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 466 - 544
Target Start/End: Original strand, 44352087 - 44352165
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    ||||||||||||||||||  |||||||||||||||||| | |||||||||| |||||  ||||||||||||||| ||||    
T  44352087 catagttttaaaactcggttcggtcatcgactcggcataggtactgggtcactgagtcgatggtcgaaccattgggtca 44352165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 466 - 544
Target Start/End: Original strand, 54822047 - 54822125
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    ||||||||||||||||||| ||||||||||||||||| |  |||||||||| ||||| |||| |||||||| |||||||    
T  54822047 catagttttaaaactcggctcggtcatcgactcggcaggtgtactgggtcactgagtcaatgatcgaaccactgagtca 54822125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 466 - 547
Target Start/End: Complemental strand, 1936610 - 1936529
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    |||||||||||||| || | ||||||||||||||||| || |||||||||| || || ||||||||||||| ||||||||||    
T  1936610 catagttttaaaacccgactcggtcatcgactcggcaggggtactgggtcaatgggtcaatggtcgaaccactgagtcattg 1936529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 466 - 533
Target Start/End: Complemental strand, 29695535 - 29695468
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaa 533  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||||||| |||||  |||||||||    
T  29695535 catagttttaaaactcggctcggtcatcgactcgacatagatactgggtcactgagtcgatggtcgaa 29695468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 464 - 547
Target Start/End: Original strand, 55675418 - 55675501
Alignment:
Q  464 atcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||||| |||||||||||||| || || |||||||||| |  || |||||||||| || ||||||||||    
T  55675418 atcatagttttaaaactcggctcggtcatcgactcgacaggggtactgggtcaataggtcaatggtcgaatcactgagtcattg 55675501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 24394073 - 24394154
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    |||| |||||||||||||| ||||||||||||||||  || |||||||||| || || ||||||||||||| ||||| ||||    
T  24394073 cataattttaaaactcggctcggtcatcgactcggcgggggtactgggtcactgggtcaatggtcgaaccagtgagttattg 24394154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 465 - 544
Target Start/End: Complemental strand, 6355074 - 6354995
Alignment:
Q  465 tcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    |||||||||||||||||||| ||||||||||||||  |  | | ||| |||| || ||||||||||||||||||||||||    
T  6355074 tcatagttttaaaactcggctcggtcatcgactcgatagaggttctgagtcactgggttaatggtcgaaccattgagtca 6354995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 466 - 547
Target Start/End: Complemental strand, 26203780 - 26203699
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| || ||||||||||| ||  |  ||||||||| |||||  ||||||||||||| |||||||||    
T  26203780 catagttttaaaactcggctcgatcatcgactcgacagaggcactgggtcactgagtggatggtcgaaccatcgagtcattg 26203699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 465 - 548
Target Start/End: Complemental strand, 28359779 - 28359696
Alignment:
Q  465 tcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattga 548  Q
    |||||||||||||||||||| ||||||| |||||||||  | || ||||||| || || |||| |||||||||||  |||||||    
T  28359779 tcatagttttaaaactcggctcggtcattgactcggcagaggtattgggtcactgggtcaatgatcgaaccattggatcattga 28359696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 466 - 536
Target Start/End: Complemental strand, 19916534 - 19916464
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaacca 536  Q
    ||||||||||||||||||| ||||||||||| | |||  | |||||||||| ||  |||||||||||||||    
T  19916534 catagttttaaaactcggctcggtcatcgacacagcagaggtactgggtcattggattaatggtcgaacca 19916464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 464 - 542
Target Start/End: Complemental strand, 43245821 - 43245743
Alignment:
Q  464 atcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagt 542  Q
    ||||||||||||||| ||| | |||  ||||||||| || || || ||||||| || ||||||||||||||||||||||    
T  43245821 atcatagttttaaaattcgactcggctatcgactcgacaggggtattgggtcactgggttaatggtcgaaccattgagt 43245743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 466 - 544
Target Start/End: Original strand, 38519287 - 38519365
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    ||||||||||||||||||| |   |||||||| | ||  | || ||||||| || ||||||||||||||||||||||||    
T  38519287 catagttttaaaactcggctcaaccatcgacttgacaaaggtattgggtcactgggttaatggtcgaaccattgagtca 38519365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 466 - 516
Target Start/End: Original strand, 55497461 - 55497511
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtca 516  Q
    ||||||||||||||||||| |||||||| |||||||  | |||||||||||    
T  55497461 catagttttaaaactcggctcggtcatcaactcggcgggaatactgggtca 55497511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 2e-21; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 36858133 - 36858214
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| ||||||||||||||||  ||||||||||||| || || ||||||||||||| ||||||||||    
T  36858133 catagttttaaaactcggctcggtcatcgactcggcggggatactgggtcaatgggtcaatggtcgaaccactgagtcattg 36858214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 465 - 547
Target Start/End: Complemental strand, 11734346 - 11734264
Alignment:
Q  465 tcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    |||||||||||||||||||| ||||||||||||||||  || |||||||||| || || ||||||||||||| ||||||||||    
T  11734346 tcatagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattg 11734264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 466 - 544
Target Start/End: Complemental strand, 34259377 - 34259299
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    ||||||||||||||||||| ||||| |||||||||||||| || | ||||| ||||||||||||||||||| |||||||    
T  34259377 catagttttaaaactcggctcggtcgtcgactcggcatgggtattaggtcaatgagttaatggtcgaaccactgagtca 34259299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 466 - 544
Target Start/End: Original strand, 46170641 - 46170719
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    ||||||||||||| ||||| ||||||||||||||||| ||| ||||||||| || |||||||||||||||| |||||||    
T  46170641 catagttttaaaattcggctcggtcatcgactcggcagggacactgggtcattgggttaatggtcgaaccactgagtca 46170719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 466 - 547
Target Start/End: Complemental strand, 14802063 - 14801982
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| ||||||||||||||||  || |||| ||||| || || ||||||||||||||||||||||||    
T  14802063 catagttttaaaactcggctcggtcatcgactcggcgggggtactaggtcaatgggtcaatggtcgaaccattgagtcattg 14801982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 466 - 547
Target Start/End: Complemental strand, 15249055 - 15248974
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| ||||||||||||||||  || |||| ||||| || || ||||||||||||||||||||||||    
T  15249055 catagttttaaaactcggctcggtcatcgactcggcgggggtactaggtcaatgggtcaatggtcgaaccattgagtcattg 15248974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 466 - 547
Target Start/End: Complemental strand, 16217108 - 16217027
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| ||||||||||||| |||||| || ||||||| || || ||||||||||||| ||||||||||    
T  16217108 catagttttaaaactcggctcggtcatcgactcagcatgggtattgggtcactgggtcaatggtcgaaccactgagtcattg 16217027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 465 - 536
Target Start/End: Complemental strand, 10992820 - 10992749
Alignment:
Q  465 tcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaacca 536  Q
    |||||||||||||||||||| ||| | ||||||||||| || |||||||||| |||||||||||||||||||    
T  10992820 tcatagttttaaaactcggctcggccgtcgactcggcaggggtactgggtcaatgagttaatggtcgaacca 10992749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 466 - 548
Target Start/End: Original strand, 1582155 - 1582237
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattga 548  Q
    ||||||||||||||||||| ||||||||||||| ||| |   ||||||||| ||||| |||||||||||| ||||||||||||    
T  1582155 catagttttaaaactcggctcggtcatcgactcagcaggtgcactgggtcaatgagtcaatggtcgaaccgttgagtcattga 1582237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 466 - 544
Target Start/End: Original strand, 31813488 - 31813566
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    ||||||||||||||||| | ||||||||||||||||| || |||||| ||| || |||||||||||||||| |||||||    
T  31813488 catagttttaaaactcgactcggtcatcgactcggcaggggtactggttcaatgggttaatggtcgaaccactgagtca 31813566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 466 - 547
Target Start/End: Complemental strand, 36099791 - 36099710
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| ||||||| ||||||||  || |||||||||| || || ||||||||||||| ||||||||||    
T  36099791 catagttttaaaactcggctcggtcattgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattg 36099710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 466 - 547
Target Start/End: Complemental strand, 45269553 - 45269472
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| ||||||||||||||||   | |||||||||| || || ||||||||||||| ||||||||||    
T  45269553 catagttttaaaactcggctcggtcatcgactcggcggaggtactgggtcactgggtcaatggtcgaaccagtgagtcattg 45269472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 468 - 544
Target Start/End: Original strand, 5418899 - 5418975
Alignment:
Q  468 tagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    ||||||||||||||||| |||||||||||||||||  | |||||||| | || |||||||||||||||| |||||||    
T  5418899 tagttttaaaactcggctcggtcatcgactcggcagaggtactgggttaatgggttaatggtcgaaccactgagtca 5418975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 467 - 547
Target Start/End: Original strand, 10198308 - 10198388
Alignment:
Q  467 atagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    |||||||||||||||||| ||||||||||||||||| || || ||| ||| || || ||||||||||||| ||||||||||    
T  10198308 atagttttaaaactcggctcggtcatcgactcggcaggggtattggatcactgggtcaatggtcgaaccactgagtcattg 10198388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 464 - 547
Target Start/End: Complemental strand, 24096825 - 24096742
Alignment:
Q  464 atcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||||  |||||||||| |||||| || |||||||||| ||  | ||||||||||||| ||||||||||    
T  24096825 atcatagttttaaaactcggttcggtcatcgattcggcaggggtactgggtcactggatcaatggtcgaaccactgagtcattg 24096742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 9822519 - 9822600
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| || ||||||| |||||  || || ||||||| ||||| ||||||||||||| ||||||||||    
T  9822519 catagttttaaaactcggctcgatcatcgattcggcgggggtattgggtcactgagtcaatggtcgaaccagtgagtcattg 9822600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 10724444 - 10724525
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| || ||||||| |||||  || || ||||||| ||||| ||||||||||||| ||||||||||    
T  10724444 catagttttaaaactcggctcgatcatcgattcggcgggggtattgggtcactgagtcaatggtcgaaccagtgagtcattg 10724525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 29983235 - 29983316
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||  |||||||||||||||   || |||||||||| || || ||||||||||||| ||||||||||    
T  29983235 catagttttaaaactcggttcggtcatcgactcggtgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattg 29983316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 466 - 547
Target Start/End: Complemental strand, 34192006 - 34191925
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| |||| |||||||| ||| || |||||| ||| || ||| |||||||||||| ||||||||||    
T  34192006 catagttttaaaactcggctcggtgatcgactctgcaggggtactggatcactgggttgatggtcgaaccactgagtcattg 34191925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 466 - 547
Target Start/End: Complemental strand, 44606035 - 44605954
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||| ||||| ||||||||||||||||  || |||||||||| || || |||||| |||||| ||||||||||    
T  44606035 catagttttaaaattcggctcggtcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattg 44605954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 468 - 547
Target Start/End: Complemental strand, 33628360 - 33628281
Alignment:
Q  468 tagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||| ||| ||| ||||||||| || ||||| |||| || || |||||| ||||||||| |||||||    
T  33628360 tagttttaaaactcggctcggacattgactcggcaggggtactgagtcactgggtcaatggttgaaccattgggtcattg 33628281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 33610590 - 33610671
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||| || || | |||||| |||| | | || ||||  |||| ||||||||||||||||||| ||||||||||    
T  33610590 catagttttaaaattctgctcagtcatcaactctgtaagggtactaagtcactgagttaatggtcgaaccactgagtcattg 33610671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 2e-21; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 466 - 543
Target Start/End: Original strand, 30269593 - 30269670
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtc 543  Q
    ||||||||||||||||||| ||||||||||||||||  || |||||||||| ||||||||||||||||||| ||||||    
T  30269593 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgagttaatggtcgaaccactgagtc 30269670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 466 - 544
Target Start/End: Original strand, 6817290 - 6817368
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    ||||||||||||||||||| ||||||||||||||| | || |||||||||| || |||||||||||||||| |||||||    
T  6817290 catagttttaaaactcggctcggtcatcgactcggtaagggtactgggtcattgggttaatggtcgaaccactgagtca 6817368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 23595691 - 23595772
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| |||| |||||||||||| || |||||||||| || ||| |||||||||||| ||||||||||    
T  23595691 catagttttaaaactcggctcggtgatcgactcggcaggggtactgggtcactgggttgatggtcgaaccactgagtcattg 23595772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 466 - 547
Target Start/End: Complemental strand, 24068300 - 24068219
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| ||||||||||||||||  || || ||||||| || || ||||||||||||| ||||||||||    
T  24068300 catagttttaaaactcggctcggtcatcgactcggcgggggtattgggtcaatgggtcaatggtcgaaccactgagtcattg 24068219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 466 - 516
Target Start/End: Complemental strand, 22351347 - 22351297
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtca 516  Q
    ||||||||||||||||||| ||||||||||||||||  |||||||||||||    
T  22351347 catagttttaaaactcggctcggtcatcgactcggcggggatactgggtca 22351297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 466 - 516
Target Start/End: Complemental strand, 29419863 - 29419813
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtca 516  Q
    ||||||||||||||||||| ||||||||||||||||| || ||||||||||    
T  29419863 catagttttaaaactcggctcggtcatcgactcggcaggggtactgggtca 29419813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 21289551 - 21289631
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||| | ||||||| ||||||||||||||||  || |||||||||| || || ||||||||||||| ||||||||||    
T  21289551 catagttttcatactcggctcggtcatcgactcggcgggg-tactgggtcaatgggtcaatggtcgaaccagtgagtcattg 21289631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 464 - 536
Target Start/End: Original strand, 8464279 - 8464351
Alignment:
Q  464 atcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaacca 536  Q
    ||||||||||||||| ||||| ||||||||  |||||||    |||||||||| |||||||||||||||||||    
T  8464279 atcatagttttaaaattcggctcggtcatcagctcggcagatgtactgggtcactgagttaatggtcgaacca 8464351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 466 - 536
Target Start/End: Original strand, 30426318 - 30426388
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaacca 536  Q
    ||||||||||||| ||||| |||||||||||||||   || |||||| ||| | |||||||||||||||||    
T  30426318 catagttttaaaattcggctcggtcatcgactcggacagggtactggatcaataagttaatggtcgaacca 30426388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 468 - 547
Target Start/End: Complemental strand, 31513474 - 31513395
Alignment:
Q  468 tagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||| ||| ||| ||||||| | || ||||| |||| || || |||||| ||||||||| |||||||    
T  31513474 tagttttaaaactcggctcggacattgactcggaaggggtactgagtcaatgggtcaatggttgaaccattgggtcattg 31513395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 2e-21; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 466 - 547
Target Start/End: Complemental strand, 35305399 - 35305318
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| ||||||||||||||||| || |||||||||| || || ||||||||||||| ||||||||||    
T  35305399 catagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcactgggtcaatggtcgaaccactgagtcattg 35305318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 465 - 547
Target Start/End: Original strand, 3988704 - 3988786
Alignment:
Q  465 tcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    |||||||||||||||||||| ||||||| ||||||||| ||||||||||||| || || |||||||||| ||||| |||||||    
T  3988704 tcatagttttaaaactcggctcggtcattgactcggcagggatactgggtcattgggtcaatggtcgaatcattgggtcattg 3988786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 17513020 - 17513101
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| ||||||||||||||||  || |||||||||| || || ||||||||||||| ||||||||||    
T  17513020 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattg 17513101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 465 - 547
Target Start/End: Original strand, 7153436 - 7153517
Alignment:
Q  465 tcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    |||||||||||||||||||| |||||||||||||| |  || |||||||||| ||| ||||||||||||||| ||||||||||    
T  7153436 tcatagttttaaaactcggctcggtcatcgactcgacgggggtactgggtcaatga-ttaatggtcgaaccactgagtcattg 7153517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 466 - 544
Target Start/End: Complemental strand, 16106818 - 16106740
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    ||||||||||||||||||| ||||||||||||||||| |  || ||||||| || |||||||||||||||| |||||||    
T  16106818 catagttttaaaactcggctcggtcatcgactcggcaagagtattgggtcactgggttaatggtcgaaccactgagtca 16106740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 466 - 536
Target Start/End: Complemental strand, 16457851 - 16457781
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaacca 536  Q
    ||||||||||||||||||| |||||||||| ||||||||| || ||||||| |||||||||||| ||||||    
T  16457851 catagttttaaaactcggctcggtcatcgattcggcatgggtattgggtcaatgagttaatggtggaacca 16457781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 465 - 547
Target Start/End: Original strand, 24128752 - 24128834
Alignment:
Q  465 tcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    |||||||||||||||||||| ||||||||||||||||  || |||||||||| || || ||||||||||||| ||| ||||||    
T  24128752 tcatagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgaatcattg 24128834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 466 - 547
Target Start/End: Complemental strand, 23293289 - 23293208
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| ||||||| ||||||||  || |||||||||| || || ||||||||||||| ||||||||||    
T  23293289 catagttttaaaactcggctcggtcattgactcggcgagggtactgggtcaatgggtgaatggtcgaaccactgagtcattg 23293208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 464 - 547
Target Start/End: Complemental strand, 6065616 - 6065533
Alignment:
Q  464 atcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||||  |||||||||| |||||| || ||||| |||| || |||||||||||||||| || |||||||    
T  6065616 atcatagttttaaaactcggtccggtcatcgattcggcaggggtactgagtcactgggttaatggtcgaaccactgggtcattg 6065533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 466 - 544
Target Start/End: Original strand, 37484403 - 37484481
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    ||||||||||||||||||| ||||  ||||||||| | ||||||||||||| || |||| || ||||||||||||||||    
T  37484403 catagttttaaaactcggctcggttgtcgactcggtaaggatactgggtcattgggttattgatcgaaccattgagtca 37484481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 825 - 933
Target Start/End: Complemental strand, 13016276 - 13016163
Alignment:
Q  825 aaattggagggtaagcaaaatgagaatcagtgatagaatacatgctattgagtt-----ccatcccacctttataatgacaatccaaacaataaaatctt 919  Q
    ||||||||||||||||||||||||| | |||||| ||||||||   ||||||||     |||||||| | || |||| || ||||||||||| |||| ||    
T  13016276 aaattggagggtaagcaaaatgagagtaagtgatggaatacatttcattgagttccattccatcccatccttttaattactatccaaacaatgaaatttt 13016177  T
Q  920 aatttattccattc 933  Q
    ||||||||||||||    
T  13016176 aatttattccattc 13016163  T

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Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 19881939 - 19882020
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| ||||||| ||||||||  || |||||||||| |  || ||||||||||||| ||||||||||    
T  19881939 catagttttaaaactcggctcggtcattgactcggcgggggtactgggtcacttggtcaatggtcgaaccagtgagtcattg 19882020  T

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Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 466 - 547
Target Start/End: Complemental strand, 32878817 - 32878736
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||| ||||| ||||||||||  || |||||||||  || || ||||||||||||| ||||||||||    
T  32878817 catagttttaaaactcggctcggtcgtcgactcggcgggggtactgggtccctgggtcaatggtcgaaccaatgagtcattg 32878736  T

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Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 466 - 545
Target Start/End: Complemental strand, 10810661 - 10810582
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcat 545  Q
    ||||||||||||||||||| || ||||||||||||||  | |||||||||| || ||||||| |||||||| || |||||    
T  10810661 catagttttaaaactcggctcgatcatcgactcggcaacggtactgggtcaatgggttaatgatcgaaccactgggtcat 10810582  T

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Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 466 - 533
Target Start/End: Complemental strand, 21800786 - 21800719
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaa 533  Q
    ||||||||||||||||||| ||||||||||||||| | || ||| |||||| || || ||||||||||    
T  21800786 catagttttaaaactcggctcggtcatcgactcggtaggggtaccgggtcactgggtcaatggtcgaa 21800719  T

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Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 466 - 516
Target Start/End: Complemental strand, 29523986 - 29523936
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtca 516  Q
    ||||||||||||||||||| ||||||||||||||||  || ||||||||||    
T  29523986 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtca 29523936  T

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Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 466 - 543
Target Start/End: Original strand, 18540658 - 18540735
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtc 543  Q
    ||||||||||||||||||| || |||||||||||| | || |||||| ||| || || | ||||||||||| ||||||    
T  18540658 catagttttaaaactcggctcgatcatcgactcggaaggggtactggatcattgggtcactggtcgaaccactgagtc 18540735  T

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Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 39678304 - 39678385
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||| |||   | |||||||||||||||  | |||||||||| ||||| |||||||||| || ||||||||||    
T  39678304 catagttttaaaattcgattctgtcatcgactcggcagaggtactgggtcaatgagtcaatggtcgaatcactgagtcattg 39678385  T

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Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 466 - 536
Target Start/End: Complemental strand, 22315294 - 22315224
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaacca 536  Q
    ||||||||||||||||| | ||||||| ||||||||| |  |||| |||||  |||| |||||||||||||    
T  22315294 catagttttaaaactcgtctcggtcattgactcggcaggtgtactaggtcaccgagtcaatggtcgaacca 22315224  T

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Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 466 - 544
Target Start/End: Complemental strand, 37254937 - 37254859
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    ||||||||||||||||||  ||||||| |||||||   || |||||||||| ||||| | |||| ||||||||| ||||    
T  37254937 catagttttaaaactcggaccggtcattgactcggtgaggttactgggtcactgagtcattggttgaaccattgggtca 37254859  T

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Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 466 - 516
Target Start/End: Complemental strand, 37315037 - 37314987
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtca 516  Q
    ||||||||||||||||||| |||||||||| |||||  || ||||||||||    
T  37315037 catagttttaaaactcggctcggtcatcgattcggcgggggtactgggtca 37314987  T

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Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 20907071 - 20907152
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    |||||||||||||  |||| |||| ||||||||| |   | ||| || ||| ||||||| ||||||||||||||||||||||    
T  20907071 catagttttaaaaaccggcacggtaatcgactcgacgatgctaccggatcactgagttactggtcgaaccattgagtcattg 20907152  T

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Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 23250969 - 23251050
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    |||||||||||||||| || | |||||||||||| |  || |||||||||| ||  | |||||||||||||  |||||||||    
T  23250969 catagttttaaaactcagctcagtcatcgactcgacgggggtactgggtcactggatcaatggtcgaaccagcgagtcattg 23251050  T

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Target: scaffold0036 (Bit Score: 52; Significance: 3e-20; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 464 - 547
Target Start/End: Original strand, 51907 - 51990
Alignment:
Q  464 atcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||||||| ||||||||||||||||  || |||||||||| ||||| |||||||||||||  |||||||||    
T  51907 atcatagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgagtcaatggtcgaaccacagagtcattg 51990  T

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Target: scaffold0070 (Bit Score: 47; Significance: 3e-17; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 465 - 547
Target Start/End: Original strand, 12720 - 12802
Alignment:
Q  465 tcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    |||||||||||||||||| | ||||||||||||||||  || |||||||||| || || ||||||||||||| ||||||||||    
T  12720 tcatagttttaaaactcgactcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattg 12802  T

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Target: scaffold0043 (Bit Score: 47; Significance: 3e-17; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 466 - 544
Target Start/End: Original strand, 64345 - 64423
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtca 544  Q
    ||||||||||||||||||| |||||||||||||| ||| | |||||||||| |||||  ||||||||||||||| ||||    
T  64345 catagttttaaaactcggctcggtcatcgactcgacataggtactgggtcactgagtcgatggtcgaaccattgggtca 64423  T

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Target: scaffold0116 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 466 - 543
Target Start/End: Original strand, 7839 - 7916
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtc 543  Q
    ||||||||||||||||||| |||||||||||||||||  | ||||| |||| || |||||||||||||||| ||||||    
T  7839 catagttttaaaactcggctcggtcatcgactcggcaaaggtactgagtcattgggttaatggtcgaaccactgagtc 7916  T

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Target: scaffold0242 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 465 - 547
Target Start/End: Complemental strand, 17956 - 17874
Alignment:
Q  465 tcatagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtcattg 547  Q
    ||||||||||||||||| || ||  |||  |||||||| || ||||| |||| || |||||||||||||||||||||||||||    
T  17956 tcatagttttaaaactcagctcgaccattcactcggcaggggtactgagtcattgggttaatggtcgaaccattgagtcattg 17874  T

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Target: scaffold0712 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 466 - 543
Target Start/End: Complemental strand, 5030 - 4954
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtc 543  Q
    ||||||||||||||||||| ||||||||||||||| | || |  ||||||| |  |||||||||||||||| ||||||    
T  5030 catagttttaaaactcggctcggtcatcgactcggta-gggtgttgggtcactcggttaatggtcgaaccactgagtc 4954  T

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Target: scaffold0709 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 466 - 543
Target Start/End: Complemental strand, 5050 - 4974
Alignment:
Q  466 catagttttaaaactcggcgcggtcatcgactcggcatggatactgggtcagtgagttaatggtcgaaccattgagtc 543  Q
    ||||||||||||||||||| ||||||||||||||| | || |  ||||||| |  |||||||||||||||| ||||||    
T  5050 catagttttaaaactcggctcggtcatcgactcggta-gggtgttgggtcactcggttaatggtcgaaccactgagtc 4974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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