View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18380_high_5 (Length: 567)

Name: NF18380_high_5
Description: NF18380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18380_high_5
NF18380_high_5
[»] chr2 (32 HSPs)
chr2 (18-295)||(6577438-6577716)
chr2 (356-559)||(6577174-6577377)
chr2 (60-289)||(25892425-25892655)
chr2 (356-496)||(25892722-25892862)
chr2 (67-185)||(15848126-15848245)
chr2 (118-176)||(10840566-10840624)
chr2 (109-174)||(37895629-37895694)
chr2 (64-166)||(6573082-6573184)
chr2 (64-173)||(3653363-3653472)
chr2 (109-174)||(36382242-36382307)
chr2 (109-174)||(36479799-36479864)
chr2 (113-174)||(36755178-36755239)
chr2 (109-174)||(44714043-44714108)
chr2 (109-185)||(25893489-25893565)
chr2 (104-174)||(39423591-39423661)
chr2 (109-174)||(2318239-2318304)
chr2 (109-174)||(10712804-10712869)
chr2 (118-175)||(11689631-11689688)
chr2 (118-175)||(11721371-11721428)
chr2 (109-174)||(13692502-13692567)
chr2 (64-168)||(41587270-41587374)
chr2 (64-159)||(15604374-15604470)
chr2 (64-185)||(6573578-6573698)
chr2 (67-165)||(39498348-39498447)
chr2 (111-165)||(6657961-6658015)
chr2 (111-165)||(16099138-16099192)
chr2 (108-174)||(34448077-34448143)
chr2 (109-142)||(3555331-3555364)
chr2 (109-142)||(6588764-6588797)
chr2 (111-160)||(11163319-11163368)
chr2 (109-174)||(15848370-15848435)
chr2 (121-185)||(6846877-6846941)
[»] chr4 (55 HSPs)
chr4 (108-230)||(54434269-54434391)
chr4 (64-190)||(16605637-16605764)
chr4 (108-174)||(17356204-17356270)
chr4 (118-175)||(11857982-11858039)
chr4 (109-174)||(24411439-24411504)
chr4 (110-174)||(34765662-34765726)
chr4 (64-139)||(39667091-39667167)
chr4 (109-185)||(52909334-52909410)
chr4 (67-165)||(43155787-43155886)
chr4 (104-174)||(53701888-53701958)
chr4 (109-174)||(14801817-14801882)
chr4 (109-174)||(34765461-34765526)
chr4 (109-174)||(35028280-35028345)
chr4 (109-165)||(50418928-50418984)
chr4 (67-165)||(18831387-18831486)
chr4 (67-165)||(36009104-36009203)
chr4 (118-177)||(48529855-48529914)
chr4 (67-180)||(54435373-54435487)
chr4 (64-168)||(27068945-27069050)
chr4 (67-139)||(50750925-50750998)
chr4 (64-163)||(5818066-5818166)
chr4 (109-173)||(10781767-10781831)
chr4 (109-173)||(24349755-24349819)
chr4 (110-174)||(37976435-37976499)
chr4 (109-165)||(49879467-49879523)
chr4 (64-142)||(10408201-10408280)
chr4 (67-165)||(13058075-13058174)
chr4 (109-168)||(27891665-27891724)
chr4 (101-140)||(39538153-39538192)
chr4 (64-142)||(50504137-50504216)
chr4 (64-142)||(54858872-54858951)
chr4 (109-168)||(55867402-55867461)
chr4 (67-160)||(11448025-11448119)
chr4 (108-174)||(17356005-17356071)
chr4 (111-165)||(23613392-23613446)
chr4 (67-160)||(37248274-37248368)
chr4 (119-169)||(41583518-41583568)
chr4 (67-160)||(44967334-44967428)
chr4 (118-180)||(48528562-48528624)
chr4 (105-174)||(14802017-14802086)
chr4 (110-159)||(24711193-24711242)
chr4 (109-142)||(39539232-39539265)
chr4 (109-174)||(46661196-46661261)
chr4 (109-174)||(51692801-51692866)
chr4 (118-171)||(52298116-52298169)
chr4 (64-168)||(52573263-52573368)
chr4 (109-174)||(54086977-54087042)
chr4 (118-174)||(15507955-15508011)
chr4 (64-139)||(22718254-22718330)
chr4 (64-139)||(22923173-22923249)
chr4 (64-139)||(22927826-22927902)
chr4 (64-139)||(22984105-22984181)
chr4 (64-139)||(22986886-22986962)
chr4 (64-139)||(22997693-22997769)
chr4 (109-185)||(52909524-52909600)
[»] chr3 (22 HSPs)
chr3 (356-431)||(44960828-44960903)
chr3 (109-174)||(9294240-9294305)
chr3 (109-174)||(26463880-26463945)
chr3 (109-174)||(33689661-33689726)
chr3 (113-185)||(33156265-33156337)
chr3 (109-185)||(53756825-53756901)
chr3 (64-165)||(2796214-2796316)
chr3 (118-175)||(20704608-20704665)
chr3 (109-174)||(23458261-23458326)
chr3 (118-175)||(30380936-30380993)
chr3 (109-174)||(43384364-43384429)
chr3 (119-185)||(25108366-25108432)
chr3 (112-174)||(40758228-40758290)
chr3 (111-169)||(51994173-51994231)
chr3 (67-139)||(4323519-4323592)
chr3 (64-168)||(40788706-40788811)
chr3 (64-140)||(1078572-1078648)
chr3 (119-174)||(9367832-9367887)
chr3 (109-164)||(40033748-40033803)
chr3 (64-165)||(10770751-10770853)
chr3 (109-174)||(46475063-46475128)
chr3 (113-185)||(40506058-40506130)
[»] chr6 (21 HSPs)
chr6 (67-269)||(26463217-26463409)
chr6 (67-174)||(33517572-33517680)
chr6 (64-142)||(31406913-31406992)
chr6 (111-185)||(12080719-12080793)
chr6 (109-174)||(21627995-21628060)
chr6 (64-168)||(31407164-31407269)
chr6 (109-174)||(33647044-33647109)
chr6 (109-173)||(3059338-3059402)
chr6 (67-174)||(30803899-30804007)
chr6 (64-142)||(7160839-7160918)
chr6 (67-165)||(30337487-30337586)
chr6 (118-175)||(1215147-1215204)
chr6 (109-174)||(11392919-11392984)
chr6 (109-174)||(11434883-11434948)
chr6 (109-174)||(21627794-21627859)
chr6 (109-174)||(30725840-30725905)
chr6 (109-174)||(33517816-33517881)
chr6 (64-139)||(7905278-7905354)
chr6 (67-174)||(12080918-12081026)
chr6 (109-165)||(17734454-17734510)
chr6 (110-174)||(30804143-30804207)
[»] chr1 (41 HSPs)
chr1 (186-269)||(31197207-31197290)
chr1 (109-174)||(4960621-4960686)
chr1 (109-174)||(17662132-17662197)
chr1 (109-185)||(1103542-1103618)
chr1 (67-174)||(6367600-6367708)
chr1 (108-174)||(43758902-43758968)
chr1 (109-174)||(14879052-14879117)
chr1 (109-190)||(44523402-44523483)
chr1 (109-185)||(42248554-42248630)
chr1 (109-172)||(40210654-40210717)
chr1 (118-175)||(22103787-22103844)
chr1 (109-174)||(24009823-24009888)
chr1 (67-165)||(25647922-25648021)
chr1 (118-185)||(27999122-27999189)
chr1 (118-185)||(34850336-34850403)
chr1 (101-183)||(13300177-13300259)
chr1 (119-185)||(25065901-25065967)
chr1 (104-174)||(30711403-30711473)
chr1 (108-174)||(32917340-32917406)
chr1 (118-175)||(13245940-13245997)
chr1 (109-174)||(13914349-13914414)
chr1 (109-174)||(19017911-19017976)
chr1 (118-175)||(21444684-21444741)
chr1 (64-168)||(40714479-40714584)
chr1 (109-174)||(46163111-46163176)
chr1 (109-165)||(26024504-26024560)
chr1 (67-158)||(40772545-40772637)
chr1 (113-184)||(1841544-1841615)
chr1 (64-142)||(35038490-35038569)
chr1 (119-174)||(37578474-37578529)
chr1 (111-165)||(183482-183536)
chr1 (67-140)||(17691257-17691331)
chr1 (108-174)||(48779401-48779467)
chr1 (108-185)||(1103732-1103809)
chr1 (109-174)||(1841741-1841806)
chr1 (109-174)||(6367844-6367909)
chr1 (109-174)||(7821035-7821100)
chr1 (101-174)||(13914141-13914214)
chr1 (109-174)||(34464731-34464796)
chr1 (109-174)||(35152625-35152690)
chr1 (64-139)||(17188989-17189065)
[»] chr8 (35 HSPs)
chr8 (109-174)||(4405942-4406007)
chr8 (67-160)||(12273149-12273243)
chr8 (109-174)||(16388808-16388873)
chr8 (109-174)||(36928557-36928622)
chr8 (67-165)||(23698535-23698634)
chr8 (109-174)||(13186141-13186206)
chr8 (110-183)||(30459453-30459526)
chr8 (109-174)||(31608795-31608860)
chr8 (109-174)||(39071757-39071822)
chr8 (109-174)||(40318246-40318311)
chr8 (104-174)||(35756658-35756728)
chr8 (64-168)||(35634385-35634490)
chr8 (109-174)||(38955954-38956019)
chr8 (64-168)||(44664543-44664648)
chr8 (64-159)||(234035-234131)
chr8 (64-159)||(710446-710542)
chr8 (64-159)||(747658-747754)
chr8 (64-159)||(871553-871649)
chr8 (109-165)||(8316879-8316935)
chr8 (109-165)||(23663805-23663861)
chr8 (109-168)||(6471771-6471830)
chr8 (64-142)||(7983463-7983542)
chr8 (120-175)||(22890275-22890330)
chr8 (111-165)||(1425313-1425367)
chr8 (110-160)||(38862700-38862750)
chr8 (109-174)||(4994939-4995004)
chr8 (64-168)||(10445621-10445726)
chr8 (118-175)||(24085864-24085921)
chr8 (109-142)||(34061642-34061675)
chr8 (109-174)||(36928758-36928823)
chr8 (108-160)||(2534775-2534827)
chr8 (64-159)||(15229966-15230062)
chr8 (109-165)||(22915649-22915705)
chr8 (108-168)||(34176521-34176581)
chr8 (110-174)||(36186349-36186413)
[»] chr7 (33 HSPs)
chr7 (109-174)||(23181276-23181341)
chr7 (67-174)||(10935832-10935940)
chr7 (67-174)||(28469290-28469398)
chr7 (110-174)||(32053425-32053489)
chr7 (109-174)||(2640460-2640525)
chr7 (109-174)||(45010679-45010744)
chr7 (110-174)||(3914220-3914284)
chr7 (118-185)||(5457178-5457245)
chr7 (67-165)||(6571051-6571150)
chr7 (111-174)||(42731502-42731565)
chr7 (118-180)||(11397468-11397530)
chr7 (119-185)||(45915751-45915817)
chr7 (101-174)||(2640251-2640324)
chr7 (111-168)||(27396883-27396940)
chr7 (64-168)||(42618197-42618302)
chr7 (118-174)||(40379859-40379915)
chr7 (109-185)||(48789074-48789150)
chr7 (67-157)||(6253509-6253600)
chr7 (67-165)||(17102058-17102157)
chr7 (67-165)||(27991777-27991876)
chr7 (67-165)||(32298996-32299095)
chr7 (101-140)||(33808396-33808435)
chr7 (119-174)||(38643641-38643696)
chr7 (109-168)||(43124440-43124499)
chr7 (108-174)||(6253722-6253788)
chr7 (109-167)||(45010893-45010951)
chr7 (119-168)||(4226216-4226265)
chr7 (109-174)||(17885709-17885774)
chr7 (109-174)||(37656933-37656998)
chr7 (109-142)||(42362531-42362564)
chr7 (64-168)||(46205595-46205700)
chr7 (64-139)||(23058744-23058820)
chr7 (101-185)||(33809375-33809459)
[»] chr5 (42 HSPs)
chr5 (67-174)||(13962902-13963010)
chr5 (67-174)||(32242280-32242388)
chr5 (109-174)||(19892590-19892655)
chr5 (109-174)||(29646644-29646709)
chr5 (67-174)||(35512186-35512294)
chr5 (104-174)||(8322480-8322550)
chr5 (109-174)||(5993970-5994035)
chr5 (109-174)||(39453381-39453446)
chr5 (83-181)||(5255072-5255170)
chr5 (108-174)||(38442148-38442214)
chr5 (64-168)||(8875484-8875589)
chr5 (109-174)||(11047518-11047583)
chr5 (109-174)||(14194705-14194770)
chr5 (109-174)||(20840614-20840679)
chr5 (67-163)||(35920477-35920574)
chr5 (110-174)||(5024300-5024364)
chr5 (118-174)||(12904844-12904900)
chr5 (109-169)||(24547412-24547472)
chr5 (67-165)||(3529133-3529232)
chr5 (109-168)||(11741805-11741864)
chr5 (109-160)||(28269684-28269735)
chr5 (109-160)||(38475295-38475346)
chr5 (108-174)||(16156935-16157001)
chr5 (109-174)||(186500-186565)
chr5 (109-174)||(186701-186766)
chr5 (191-228)||(5255166-5255203)
chr5 (108-157)||(6150534-6150583)
chr5 (109-174)||(6150702-6150767)
chr5 (109-174)||(11047719-11047784)
chr5 (109-174)||(11740768-11740833)
chr5 (109-174)||(16157137-16157202)
chr5 (109-174)||(17202480-17202545)
chr5 (108-185)||(17202670-17202747)
chr5 (64-168)||(17544334-17544439)
chr5 (109-174)||(18247165-18247230)
chr5 (109-174)||(20814417-20814482)
chr5 (109-174)||(28269503-28269568)
chr5 (109-174)||(39453581-39453646)
chr5 (109-174)||(43159096-43159161)
chr5 (109-185)||(11761988-11762064)
chr5 (109-157)||(18670280-18670328)
chr5 (110-174)||(20814217-20814281)
[»] scaffold0031 (1 HSPs)
scaffold0031 (64-174)||(69000-69111)
[»] scaffold0005 (2 HSPs)
scaffold0005 (109-174)||(37845-37910)
scaffold0005 (105-174)||(37641-37710)
[»] scaffold0388 (1 HSPs)
scaffold0388 (64-168)||(12525-12630)
[»] scaffold0007 (1 HSPs)
scaffold0007 (109-165)||(1850-1906)
[»] scaffold0347 (1 HSPs)
scaffold0347 (119-185)||(14536-14602)
[»] scaffold0328 (1 HSPs)
scaffold0328 (64-168)||(11426-11531)
[»] scaffold0295 (1 HSPs)
scaffold0295 (110-174)||(2225-2289)
[»] scaffold0181 (1 HSPs)
scaffold0181 (147-175)||(9325-9353)


Alignment Details
Target: chr2 (Bit Score: 199; Significance: 1e-108; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 18 - 295
Target Start/End: Complemental strand, 6577716 - 6577438
Alignment:
Q  18 ctctatgtgtgggagatgaagtcaataattataatattttttggcttcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcatt 116  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||| || |||||| | |||||||    
T  6577716 ctctatgtgtgggagataaagtcaataattataatattttttggcgtcatttaaaaatttgtccctgtaatcgccaatcctggcaaattactattgcatt 6577617  T
Q  117 ctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctgatgtggaacatctgatttcacatacaaacgagaaagg 216  Q
     |||||| |||||||||| ||||| |||| |||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||| |    
T  6577616 gtttaattatttaaaaatccgtccctcttcccacttaatcactgccacgtcactaattagttgatgtggcacatctgatttcacatacaaacgagaaatg 6577517  T
Q  217 acaaaaatgcccttgatttcatcttccttctccctattctttctcgtgttcttcttaatgttattcatcatcacctgca 295  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6577516 acgaaaatgcccttgatttcatcttccttctccctattctttctcgtgttcttcttcatgttattcatcatcacctgca 6577438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 356 - 559
Target Start/End: Complemental strand, 6577377 - 6577174
Alignment:
Q  356 ttccgatcgcgagccgtccatgccaacgccgtatctgctccgatcctcttccggtcatgatttcgcatccagtcaccaccatccctctgccgataacaac 455  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6577377 ttccgatcgcgagccgtccatgccaccgccgtatctgctccgatcctcttccggtcatgatttcgcatccagtcaccaccgtccctctgccgataacaac 6577278  T
Q  456 ctcttcttccctctccggcgagttttcggtttctgaaattgaaatatggaattggaatcacgacaatcactctttttcactcgatccagactgtaatgcc 555  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6577277 ctcttctcccctctccggcgagttttcggtttctgaaattgaaatctggaattggaatcacgacagtcactctttttcactcgatccagactgtaatgcc 6577178  T
Q  556 ctat 559  Q
    ||||    
T  6577177 ctat 6577174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 60 - 289
Target Start/End: Original strand, 25892425 - 25892655
Alignment:
Q  60 ggcttcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcac 158  Q
    |||||||||||||||||| ||| ||||||||  ||||| || ||||||  ||| |||| ||||||||||||||||||||||| |||  ||||||||| ||    
T  25892425 ggcttcatttaaaaatttgtccatgtaatcgctaatcctggcaaattacccttccattgtttaatcatttaaaaattcgtccctctccccacttaattac 25892524  T
Q  159 tgtcacgtcactaattagctgatgtggaacatctgatttcacatacaaacgagaaaggacaaaaatgcccttgatttcatcttccttctccctattcttt 258  Q
    |  |||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  25892525 taccacgtctctaattagctgatgtggcacatctgatttcacatacaaacgtgaaaggacgaaaatgcccttgatttcatcttccttctccctattcttt 25892624  T
Q  259 ctcgtgttcttcttaatgttattcatcatca 289  Q
    |||||||||||||| ||||||||||||||||    
T  25892625 ctcgtgttcttcttcatgttattcatcatca 25892655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 356 - 496
Target Start/End: Original strand, 25892722 - 25892862
Alignment:
Q  356 ttccgatcgcgagccgtccatgccaacgccgtatctgctccgatcctcttccggtcatgatttcgcatccagtcaccaccatccctctgccgataacaac 455  Q
    ||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||    
T  25892722 ttccgatcgcgagccgtccatgccgccgccgtatctgctctgatcctcttccggtcatgatttcgcatccagtcaccaccgtccctccgccggtaacaac 25892821  T
Q  456 ctcttcttccctctccggcgagttttcggtttctgaaattg 496  Q
    ||||| ||||||||||  ||||||| |||||||||||||||    
T  25892822 ctctttttccctctcccacgagtttccggtttctgaaattg 25892862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 67 - 185
Target Start/End: Original strand, 15848126 - 15848245
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    ||||||||||  ||||||||||||  ||||| ||||| |||  |||||||| ||||||||||||||| ||||||| |||  |||||||||||||| ||||    
T  15848126 tttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 15848225  T
Q  166 tcactaattagctgatgtgg 185  Q
    ||||||||| | ||||||||    
T  15848226 tcactaatttgatgatgtgg 15848245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 10840566 - 10840624
Alignment:
Q  118 tttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattag 176  Q
    ||||||||||||||  ||||||| |||| ||||||||||||||||||||||||||||||    
T  10840566 tttaatcatttaaactttcgtccctcttcccacttaatcactgtcacgtcactaattag 10840624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 37895694 - 37895629
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||| |||  |||||||||||||| |||||||||||||    
T  37895694 cttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatt 37895629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 64 - 166
Target Start/End: Original strand, 6573082 - 6573184
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatccggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtca 163  Q
    |||||||||||||| ||| ||||||||  ||||  |  ||||   |||||||| ||||||||||||||||||||||| |||  || ||||||||||||||    
T  6573082 tcatttaaaaatttgtccatgtaatcgctaatcttggcaatttaccttgcattgtttaatcatttaaaaattcgtccctctccccccttaatcactgtca 6573181  T
Q  164 cgt 166  Q
    |||    
T  6573182 cgt 6573184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 64 - 173
Target Start/End: Complemental strand, 3653472 - 3653363
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatccggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtca 163  Q
    |||||||||||||  ||| ||||||||| |||| || ||||||  ||||||   ||||||||||||||| ||||||| |||| | | |||||||||  ||    
T  3653472 tcatttaaaaattggtccatgtaatcgttaatctggcaaattacccttgcaaagtttaatcatttaaaatttcgtccctcttccaagttaatcactacca 3653373  T
Q  164 cgtcactaat 173  Q
    ||||||||||    
T  3653372 cgtcactaat 3653363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 36382242 - 36382307
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||| ||| |||  |||||||||||||| |||||||||||||    
T  36382242 cttgcattgtttaatcatttaaaatttcatccctctccccacttaatcactgccacgtcactaatt 36382307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 36479799 - 36479864
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||| |||  |||||||||||||| || ||||||||||    
T  36479799 cttgcattgtttaatcatttaaaatttcgtccatctccccacttaatcactgccatgtcactaatt 36479864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 36755178 - 36755239
Alignment:
Q  113 cattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||| ||||||||||||||| ||||||  |||  ||||||||||||||||||||||||||||    
T  36755178 cattgtttaatcatttaaaatttcgtctctctccccacttaatcactgtcacgtcactaatt 36755239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 44714108 - 44714043
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||| |||  |||||||||||||| || ||||||||||    
T  44714108 cttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaatt 44714043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 185
Target Start/End: Complemental strand, 25893565 - 25893489
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctgatgtgg 185  Q
    |||||||| |||||||||||||||||||||   |||  || ||||||||||| |||||| |||||||||||| ||||    
T  25893565 cttgcattgtttaatcatttaaaaattcgtttctctccccccttaatcactgccacgtccctaattagctgacgtgg 25893489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 174
Target Start/End: Original strand, 39423591 - 39423661
Alignment:
Q  104 ttattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||| |||| ||| ||||||||||||||| ||||||| |||  |||||||||||||| || ||||||||||    
T  39423591 ttatccttgtattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaatt 39423661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 2318239 - 2318304
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||| |||  ||||||||| | || |||||||||||||    
T  2318239 cttgcattgtttaatcatttaaaatttcgtccctctccccacttaattaatgccacgtcactaatt 2318304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 10712804 - 10712869
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||| ||| |||  |||||||||||||  |||||||||||||    
T  10712804 cttgcattgtttaatcatttaaaatttcatccctctccccacttaatcactaccacgtcactaatt 10712869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 11689631 - 11689688
Alignment:
Q  118 tttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatta 175  Q
    |||||||| |||||| ||||||| |||  |||||||||||||| ||||||||||||||    
T  11689631 tttaatcacttaaaatttcgtccatctccccacttaatcactgccacgtcactaatta 11689688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 11721428 - 11721371
Alignment:
Q  118 tttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatta 175  Q
    |||||||| |||||| ||||||  |||  |||||||||||||||||||||||||||||    
T  11721428 tttaatcacttaaaatttcgtctctctccccacttaatcactgtcacgtcactaatta 11721371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 13692567 - 13692502
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||| || |||||||||||||| |||||||||    | ||||||||||||||||||||||||||    
T  13692567 cttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgtcacgtcactaatt 13692502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 41587270 - 41587374
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtc 162  Q
    |||||||||||||  ||| ||||||||| ||||| || ||||||  |||||||| ||||||||||||||| ||| |||||    | ||||||||||||||    
T  41587270 tcatttaaaaattggtcc-tgtaatcgttaatcctggaaaattacccttgcattgtttaatcatttaaaatttcatcctttaaccaacttaatcactgtc 41587368  T
Q  163 acgtca 168  Q
    ||||||    
T  41587369 acgtca 41587374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 159
Target Start/End: Original strand, 15604374 - 15604470
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcact 159  Q
    |||||||||||||  ||||||||||||  ||||| || || |||  |||||||| ||||||||||||||| |||||||||   || |||||||||||    
T  15604374 tcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgatcaacttaatcact 15604470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 6573578 - 6573698
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtc 162  Q
    |||||||||||||  ||| ||||||||  ||||| || || |||  |||| ||| |||||||||||||||||| |||| ||   || ||||||||||| |    
T  6573578 tcatttaaaaattcgtccatgtaatcgctaatcctggcaatttacccttgaattgtttaatcatttaaaaatttgtccctcc--ccccttaatcactgcc 6573675  T
Q  163 acgtcactaattagctgatgtgg 185  Q
    ||||| |||||||||||| ||||    
T  6573676 acgtccctaattagctgacgtgg 6573698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 165
Target Start/End: Original strand, 39498348 - 39498447
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    ||||||||||  ||||||||||||| ||||| || || |||  | | |||| ||||||||||||||| ||||||| |||  |||||||||||||| ||||    
T  39498348 tttaaaaattggtccctgtaatcgttaatcctggcaatttacccctacattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 39498447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 6657961 - 6658015
Alignment:
Q  111 tgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    |||||| ||||||||||||||| ||||||| |||  |||||||||||||| ||||    
T  6657961 tgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 6658015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 16099138 - 16099192
Alignment:
Q  111 tgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    |||||| ||||||||||||||| ||||||| |||  |||||||||||||| ||||    
T  16099138 tgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 16099192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 34448143 - 34448077
Alignment:
Q  108 tcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    ||||||| || |||||||||||||| |||||||||    | |||||||||||| |||||||||||||    
T  34448143 tcttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 34448077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 142
Target Start/End: Original strand, 3555331 - 3555364
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtcctt 142  Q
    |||||||||||||||||||||||| |||||||||    
T  3555331 cttgcattctttaatcatttaaaatttcgtcctt 3555364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 142
Target Start/End: Original strand, 6588764 - 6588797
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtcctt 142  Q
    |||||||||||||||||||||||| |||||||||    
T  6588764 cttgcattctttaatcatttaaaatttcgtcctt 6588797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 11163368 - 11163319
Alignment:
Q  111 tgcattctttaatcatttaaaaattcgtccttctttccacttaatcactg 160  Q
    |||||| ||||||||||||||| ||||||| |||  ||||||||||||||    
T  11163368 tgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactg 11163319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 15848435 - 15848370
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||| || |||||||||||||| |||||||||    | |||||||||||| |||||||||||||    
T  15848435 cttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 15848370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 6846877 - 6846941
Alignment:
Q  121 aatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctgatgtgg 185  Q
    |||||||||||| ||||||| |||| ||||||||| |||| ||||| | ||||| | ||||||||    
T  6846877 aatcatttaaaatttcgtccctcttcccacttaattactgccacgttagtaatttgatgatgtgg 6846941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 4e-27; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 108 - 230
Target Start/End: Original strand, 54434269 - 54434391
Alignment:
Q  108 tcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctgatgtggaacatctgatttcacatacaaa 207  Q
    ||||||| || |||||||||||||| | |||||||| | ||| |||||||||| |||||||||||| |||||| ||||  |||||||| |||||||||||    
T  54434269 tcttgcaatcattaatcatttaaaattacgtccttcatcccagttaatcactgccacgtcactaatcagctgacgtggtgcatctgatctcacatacaaa 54434368  T
Q  208 cgagaaaggacaaaaatgccctt 230  Q
    || |||||||| |||||||||||    
T  54434369 cgtgaaaggacgaaaatgccctt 54434391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 16605637 - 16605764
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatccggtaaatt-attcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtc 162  Q
    |||||||||||||  |||||||||||||||| || |  |||| |  ||||||||  |||||||||||||| ||||||| ||   |||||||||||||| |    
T  16605637 tcatttaaaaattagtccctgtaatcgtcaaacctgccaatttacccttgcattgattaatcatttaaaatttcgtccctccccccacttaatcactgcc 16605736  T
Q  163 acgtcactaattagctgatgtggaacat 190  Q
    |||||||||||||||||| |||| ||||    
T  16605737 acgtcactaattagctgacgtggcacat 16605764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 17356270 - 17356204
Alignment:
Q  108 tcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    ||||||||| ||| ||||||||||| ||||||| |||  ||||||||||||||||||||||||||||    
T  17356270 tcttgcattgtttgatcatttaaaatttcgtccctctccccacttaatcactgtcacgtcactaatt 17356204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 11857982 - 11858039
Alignment:
Q  118 tttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatta 175  Q
    |||||||| ||||||||| |||| || |||||||||||||||||||||||||||||||    
T  11857982 tttaatcacttaaaaattggtccctcattccacttaatcactgtcacgtcactaatta 11858039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 24411439 - 24411504
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| |||||||||||||| |||||||| |||| |||||||||||||  |||||||||||||    
T  24411439 cttgcattgtttaatcatttaaagattcgtccctcttcccacttaatcactcccacgtcactaatt 24411504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 34765726 - 34765662
Alignment:
Q  110 ttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    ||||||| ||||||||||||||| ||||||| |||  |||||||||||||| |||||||||||||    
T  34765726 ttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatt 34765662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 64 - 139
Target Start/End: Complemental strand, 39667167 - 39667091
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtc 139  Q
    |||||||||||||  ||||||||||||| ||||| |||||||||  |||||||| ||||||||||||||| ||||||    
T  39667167 tcatttaaaaattggtccctgtaatcgttaatcctggtaaattacccttgcattgtttaatcatttaaaatttcgtc 39667091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 109 - 185
Target Start/End: Original strand, 52909334 - 52909410
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctgatgtgg 185  Q
    |||||||| ||||||||||||||| ||||||| |||  |||||||||||||| || |||||||||| | ||||||||    
T  52909334 cttgcattgtttaatcatttaaaatttcgtccatctccccacttaatcactgccatgtcactaatttgatgatgtgg 52909410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 43155886 - 43155787
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    ||||||||||  ||||||||||||| ||||| || || |||| | |||||| ||||||||||||||| ||||||| |||  |||||||||||||| ||||    
T  43155886 tttaaaaattggtccctgtaatcgttaatcctggcaatttatccctgcattatttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 43155787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 104 - 174
Target Start/End: Original strand, 53701888 - 53701958
Alignment:
Q  104 ttattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||| |||||||| ||||||||||||||| ||| ||| |||  |||||||||||||| |||||||||||||    
T  53701888 ttatccttgcattgtttaatcatttaaaatttcttccctctccccacttaatcactgccacgtcactaatt 53701958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 14801817 - 14801882
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||| ||| ||||||||||||||| ||||||| |||  |||||||||||||| |||||||||||||    
T  14801817 cttgtattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatt 14801882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 34765461 - 34765526
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||| || |||||||||||||| |||||||||   || ||||||||||||||||||||||||||    
T  34765461 cttgcaatcattaatcatttaaaatttcgtcctttgatcaacttaatcactgtcacgtcactaatt 34765526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 35028345 - 35028280
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||  |||  |||||||||||||| |||||||||||||    
T  35028345 cttgcattgtttaatcatttaaaatttcgtcactctccccacttaatcactgccacgtcactaatt 35028280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 50418984 - 50418928
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    |||||||| ||||||||||||||| ||||||| |||  |||||||||||||||||||    
T  50418984 cttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgtcacg 50418928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 67 - 165
Target Start/End: Original strand, 18831387 - 18831486
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    ||||||||||  ||||||||||||  ||||| ||||| |||  |||||||| ||||||||||||||| ||||||  |||  |||||||||||||| ||||    
T  18831387 tttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgcattgtttaatcatttaaaatttcgtctctctccccacttaatcactgccacg 18831486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 36009203 - 36009104
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatccggtaaatt-attcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    ||||||||||  ||||||||||||| ||||| | ||||| |  | |||||| ||||||||||||||| ||||||| |||  |||||||||||||| ||||    
T  36009203 tttaaaaattggtccctgtaatcgttaatcctggaaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 36009104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 48529914 - 48529855
Alignment:
Q  118 tttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagc 177  Q
    ||||||||||||||| || |||| ||| ||||||||||||||| ||||||||| ||||||    
T  48529914 tttaatcatttaaaattttgtccctctctccacttaatcactgccacgtcactgattagc 48529855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 180
Target Start/End: Complemental strand, 54435487 - 54435373
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatccg-gtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    |||||||||| |||| |||||||||||||||  | ||||||   |||||||   |||| |||||||| ||||||| |||| || ||||||||||  |||     
T  54435487 tttaaaaattgatccatgtaatcgtcaatccttgcaaattagcattgcatttgataattatttaaaatttcgtccctcttcccccttaatcactaacaca 54435388  T
Q  166 tcactaattagctga 180  Q
    |||||||||||||||    
T  54435387 tcactaattagctga 54435373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 27068945 - 27069050
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtc 162  Q
    |||||||||||||  ||||||||||||  ||||| || || |||  |||||||| ||||||||||||||| |||||||||    | |||||||||||| |    
T  27068945 tcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgcc 27069044  T
Q  163 acgtca 168  Q
    ||||||    
T  27069045 acgtca 27069050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 50750925 - 50750998
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtc 139  Q
    ||||||||||  ||||||||||||  ||||| || ||||||  |||||||| ||||||||||||||||||||||    
T  50750925 tttaaaaattcgtccctgtaatcgctaatcctggcaaattaaccttgcattgtttaatcatttaaaaattcgtc 50750998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 163
Target Start/End: Complemental strand, 5818166 - 5818066
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatccggtaaatt-attcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtc 162  Q
    |||||||||||||  ||||||||||||| ||||| || |||| |  |||||||| ||||||||||||||| ||| |||||    | ||||||||||||||    
T  5818166 tcatttaaaaattagtccctgtaatcgttaatcctgtcaatttacccttgcattgtttaatcatttaaaatttcatcctttgaccaacttaatcactgtc 5818067  T
Q  163 a 163  Q
    |    
T  5818066 a 5818066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 173
Target Start/End: Complemental strand, 10781831 - 10781767
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaat 173  Q
    |||||| || |||||||||||||| ||||||| |||  ||| |||| ||||||||||||||||||    
T  10781831 cttgcaatcattaatcatttaaaatttcgtccctctccccagttaaccactgtcacgtcactaat 10781767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 173
Target Start/End: Original strand, 24349755 - 24349819
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaat 173  Q
    |||||| || |||||||||||||| ||||||| |||  ||| |||||||||| ||||||||||||    
T  24349755 cttgcaatcattaatcatttaaaatttcgtccctctccccagttaatcactgccacgtcactaat 24349819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 37976499 - 37976435
Alignment:
Q  110 ttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    ||||||| ||||||||||||||| ||||||  |||  |||||||||||||| || ||||||||||    
T  37976499 ttgcattgtttaatcatttaaaatttcgtcactctccccacttaatcactgccatgtcactaatt 37976435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 49879523 - 49879467
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    |||||||| ||||||||||||||| ||||||| |||  |||||||||||||| ||||    
T  49879523 cttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 49879467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 142
Target Start/End: Complemental strand, 10408280 - 10408201
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtcctt 142  Q
    |||||||||||||  ||||||||||||  ||||| || || |||  |||||||| ||||||||||||||| |||||||||    
T  10408280 tcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctt 10408201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 165
Target Start/End: Original strand, 13058075 - 13058174
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    ||||||||||  || |||||||||  ||||| ||||| |||  | |||||| ||||||||||||||| ||||||| |||  |||||||||||||| ||||    
T  13058075 tttaaaaattggtctctgtaatcgctaatcctggtaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 13058174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 168
Target Start/End: Original strand, 27891665 - 27891724
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtca 168  Q
    |||||||| ||||||||||||||| |||||||||    | ||||||||||||||||||||    
T  27891665 cttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgtcacgtca 27891724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 140
Target Start/End: Original strand, 39538153 - 39538192
Alignment:
Q  101 aaattattcttgcattctttaatcatttaaaaattcgtcc 140  Q
    |||||| ||||||||||||||||||||||||| |||||||    
T  39538153 aaattagtcttgcattctttaatcatttaaaatttcgtcc 39538192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 142
Target Start/End: Complemental strand, 50504216 - 50504137
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtcctt 142  Q
    |||||||||||||  || |||||||||| ||||| || || |||  |||||||| ||||||||||||||| |||||||||    
T  50504216 tcatttaaaaattagtctctgtaatcgttaatccaggcaatttacccttgcattgtttaatcatttaaaatttcgtcctt 50504137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 142
Target Start/End: Complemental strand, 54858951 - 54858872
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtcctt 142  Q
    |||||||||||||  ||| ||||||||| ||||| || || |||  |||||||| ||||||||||||||| |||||||||    
T  54858951 tcatttaaaaattagtccatgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctt 54858872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 168
Target Start/End: Complemental strand, 55867461 - 55867402
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtca 168  Q
    |||||||| ||||||||||||||| ||||||| | || ||| |||||||||| |||||||    
T  55867461 cttgcattgtttaatcatttaaaatttcgtccctattcccagttaatcactgccacgtca 55867402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 160
Target Start/End: Complemental strand, 11448119 - 11448025
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatccg-gtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactg 160  Q
    |||||||||| ||| |||||||||  |||||  | ||||||  |||||||| ||||||||||||||| ||||||  | |||||| ||||||||||    
T  11448119 tttaaaaattgatctctgtaatcgctaatccttgcaaattacccttgcattgtttaatcatttaaaatttcgtcactatttccagttaatcactg 11448025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 17356005 - 17356071
Alignment:
Q  108 tcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||||| |||||||||||||| |||||| ||    | |||||||||||| |||||||||||||    
T  17356005 tcttgcattcattaatcatttaaaatttcgtcatttgaccaacttaatcactgccacgtcactaatt 17356071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 23613392 - 23613446
Alignment:
Q  111 tgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    |||||| ||||||||||||||| ||||||| |||  |||||||||||||| ||||    
T  23613392 tgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 23613446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 160
Target Start/End: Original strand, 37248274 - 37248368
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactg 160  Q
    ||||||||||  ||||||||||||  ||||| || || |||  |||||||| ||||||||||||||| ||||||  |||  ||||||||||||||    
T  37248274 tttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcgctctccccacttaatcactg 37248368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 119 - 169
Target Start/End: Complemental strand, 41583568 - 41583518
Alignment:
Q  119 ttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcac 169  Q
    |||||||||||||| ||||||| ||||  ||||||||||||| ||||||||    
T  41583568 ttaatcatttaaaatttcgtccctcttctcacttaatcactgccacgtcac 41583518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 160
Target Start/End: Complemental strand, 44967428 - 44967334
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactg 160  Q
    ||||||||||  ||||||||||||  ||||| || || |||  | |||||| ||||||||||||||| ||||||| |||  ||||||||||||||    
T  44967428 tttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactg 44967334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 118 - 180
Target Start/End: Original strand, 48528562 - 48528624
Alignment:
Q  118 tttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctga 180  Q
    ||||||||||||||| ||||| | | |  |||||||||||||||||| ||||| |||||||||    
T  48528562 tttaatcatttaaaatttcgttcctatccccacttaatcactgtcacatcactgattagctga 48528624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 174
Target Start/End: Complemental strand, 14802086 - 14802017
Alignment:
Q  105 tattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||||| || |||||||||||||| |||||||||    | |||||||||||| ||| |||||||||    
T  14802086 tattcttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacatcactaatt 14802017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 24711193 - 24711242
Alignment:
Q  110 ttgcattctttaatcatttaaaaattcgtccttctttccacttaatcact 159  Q
    ||||||| ||||||||||||||| ||||||| |||  |||||||||||||    
T  24711193 ttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcact 24711242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 142
Target Start/End: Complemental strand, 39539265 - 39539232
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtcctt 142  Q
    |||||||||||||||||||||||| |||||||||    
T  39539265 cttgcattctttaatcatttaaaatttcgtcctt 39539232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 46661261 - 46661196
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||| || |||||||||||||| |||||||||    | |||||||||||| |||||||||||||    
T  46661261 cttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 46661196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 51692866 - 51692801
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||| || |||||||||||||| |||||||||    | ||||||||||||||| ||||||||||    
T  51692866 cttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgtcatgtcactaatt 51692801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 52298116 - 52298169
Alignment:
Q  118 tttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcacta 171  Q
    ||||||||||||||| ||||||  |||  |||||||||||||| ||||||||||    
T  52298116 tttaatcatttaaaatttcgtctctctccccacttaatcactgccacgtcacta 52298169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 52573263 - 52573368
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtc 162  Q
    |||||||||||||  | ||||||||||  ||||| || || ||| |||| |||| ||||||||||||||| |||||||||    | |||||||||||| |    
T  52573263 tcatttaaaaattagtacctgtaatcgctaatcctggcaatttactcttacattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgcc 52573362  T
Q  163 acgtca 168  Q
    ||||||    
T  52573363 acgtca 52573368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 54087042 - 54086977
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||  |||  |||||||||||||  || ||||||||||    
T  54087042 cttgcattgtttaatcatttaaaatttcgtctctctccccacttaatcactaacatgtcactaatt 54086977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 15508011 - 15507955
Alignment:
Q  118 tttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    ||||||||||||||| ||||||  |||  |||||||||||||| | |||||||||||    
T  15508011 tttaatcatttaaaatttcgtctctctccccacttaatcactgccgcgtcactaatt 15507955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 139
Target Start/End: Complemental strand, 22718330 - 22718254
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtc 139  Q
    |||||||||||||  || ||||||| || ||||| || || ||| ||||||||| ||||||||||||||| ||||||    
T  22718330 tcatttaaaaattactctctgtaattgttaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 22718254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 22923173 - 22923249
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatccggtaaatt-attcttgcattctttaatcatttaaaaattcgtc 139  Q
    |||||||||||||  || |||||||||| ||||| |  |||| | ||||||||| ||||||||||||||| ||||||    
T  22923173 tcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtc 22923249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 22927826 - 22927902
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatccggtaaatt-attcttgcattctttaatcatttaaaaattcgtc 139  Q
    |||||||||||||  || |||||||||| ||||| |  |||| | ||||||||| ||||||||||||||| ||||||    
T  22927826 tcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtc 22927902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 22984105 - 22984181
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatccggtaaatt-attcttgcattctttaatcatttaaaaattcgtc 139  Q
    |||||||||||||  || |||||||||| ||||| |  |||| | ||||||||| ||||||||||||||| ||||||    
T  22984105 tcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtc 22984181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 22986886 - 22986962
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtc 139  Q
    |||||||||||||  || ||||||| || ||||| || || ||| ||||||||| ||||||||||||||| ||||||    
T  22986886 tcatttaaaaattactctctgtaattgttaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 22986962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 22997693 - 22997769
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatccggtaaatt-attcttgcattctttaatcatttaaaaattcgtc 139  Q
    |||||||||||||  || |||||||||| ||||| |  |||| | ||||||||| ||||||||||||||| ||||||    
T  22997693 tcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtc 22997769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 109 - 185
Target Start/End: Complemental strand, 52909600 - 52909524
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctgatgtgg 185  Q
    |||||| || ||||| |||||||| |||||||||    | ||||||||||||||||||||| |||| | ||||||||    
T  52909600 cttgcaatcattaattatttaaaatttcgtcctttgaccaacttaatcactgtcacgtcacaaattcgatgatgtgg 52909524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 6e-23; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 356 - 431
Target Start/End: Complemental strand, 44960903 - 44960828
Alignment:
Q  356 ttccgatcgcgagccgtccatgccaacgccgtatctgctccgatcctcttccggtcatgatttcgcatccagtcac 431  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||| || || |||||||||||||||||||    
T  44960903 ttccgatcgcgagccgtccatgccgccgccgtatctgctccgatcctctttcgatcgtgatttcgcatccagtcac 44960828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 9294305 - 9294240
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||| |||  ||||||||||||||||| ||||||||||    
T  9294305 cttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgtcactaatt 9294240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 26463945 - 26463880
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||| ||| ||||||||||||||| ||||||| |||  ||||||||||||||||||||||||||||    
T  26463945 cttgtattgtttaatcatttaaaatttcgtccctctccccacttaatcactgtcacgtcactaatt 26463880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 33689726 - 33689661
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||| |||  |||||||||||||| |||||||||||||    
T  33689726 cttgcattatttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatt 33689661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 113 - 185
Target Start/End: Complemental strand, 33156337 - 33156265
Alignment:
Q  113 cattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctgatgtgg 185  Q
    |||| ||||||||||||||| ||||||| ||   |||||||||||||| ||||||||||||||||||| ||||    
T  33156337 cattgtttaatcatttaaaatttcgtccctccccccacttaatcactgccacgtcactaattagctgacgtgg 33156265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 109 - 185
Target Start/End: Original strand, 53756825 - 53756901
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctgatgtgg 185  Q
    |||||||| ||||||||||||||| ||||||| |||| ||| ||||||| ||||| |||||||||| | ||||||||    
T  53756825 cttgcattgtttaatcatttaaaatttcgtccatcttcccatttaatcattgtcatgtcactaatttgatgatgtgg 53756901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 64 - 165
Target Start/End: Original strand, 2796214 - 2796316
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtc 162  Q
    |||||||||||||  ||||||||||||  ||||| || || |||  |||||||| ||||||||||||||| ||||||| |||  |||||||||||||| |    
T  2796214 tcatttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgcc 2796313  T
Q  163 acg 165  Q
    |||    
T  2796314 acg 2796316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 20704665 - 20704608
Alignment:
Q  118 tttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatta 175  Q
    |||||||| |||||| ||||||| |||| |||||||||||| ||||||||||||||||    
T  20704665 tttaatcacttaaaatttcgtccctcttcccacttaatcacagtcacgtcactaatta 20704608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 23458326 - 23458261
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||| |||  |||||||||||||| ||| |||||||||    
T  23458326 cttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacatcactaatt 23458261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 30380936 - 30380993
Alignment:
Q  118 tttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatta 175  Q
    ||||||||||||||| ||||||| ||| ||||||| ||||||| ||||||||||||||    
T  30380936 tttaatcatttaaaatttcgtccctctgtccacttgatcactgccacgtcactaatta 30380993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 43384364 - 43384429
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||  |||  ||||||||||||||||| ||||||||||    
T  43384364 cttgcattgtttaatcatttaaaatttcgtctctctccccacttaatcactgtcatgtcactaatt 43384429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 25108432 - 25108366
Alignment:
Q  119 ttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctgatgtgg 185  Q
    |||||||||||||| |||||||||| |  || |||||||||| ||||||||| ||||||||| ||||    
T  25108432 ttaatcatttaaaatttcgtccttcatcacagttaatcactgccacgtcactgattagctgacgtgg 25108366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 40758228 - 40758290
Alignment:
Q  112 gcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    ||||| ||||||||||||||| ||||||| |||  |||||||||||||  |||||||||||||    
T  40758228 gcattgtttaatcatttaaaatttcgtccctctccccacttaatcactaccacgtcactaatt 40758290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 51994231 - 51994173
Alignment:
Q  111 tgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcac 169  Q
    |||||| ||||||||||||||| ||||||| |||  |||||||||||||| ||||||||    
T  51994231 tgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcac 51994173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 4323592 - 4323519
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtc 139  Q
    ||||||||||  ||||||||||||  ||||| || ||||||  |||||||| ||||||||||||||||||||||    
T  4323592 tttaaaaattcgtccctgtaatcgctaatcctggcaaattaaccttgcattgtttaatcatttaaaaattcgtc 4323519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 40788811 - 40788706
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtc 162  Q
    |||||||||||||  ||||||||||||  ||||| || || ||| ||||||||| ||||||| ||||||| |||||||||    | |||||||||||| |    
T  40788811 tcatttaaaaattagtccctgtaatcgctaatcctggcaatttactcttgcattgtttaatcttttaaaatttcgtcctttgaccaacttaatcactgcc 40788712  T
Q  163 acgtca 168  Q
    ||||||    
T  40788711 acgtca 40788706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 1078572 - 1078648
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatccggtaaattattcttgcattctttaatcatttaaaaattcgtcc 140  Q
    |||||||||||||  ||||||||||||| |||| |||||||||  |||| |   ||||||||||||||| |||||||    
T  1078572 tcatttaaaaattggtccctgtaatcgttaatctggtaaattaaccttgtaaagtttaatcatttaaaatttcgtcc 1078648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 9367832 - 9367887
Alignment:
Q  119 ttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||||||||| ||||||| || | ||| |||||||||| |||||||||||||    
T  9367832 ttaatcatttaaaatttcgtccctcatcccaattaatcactgccacgtcactaatt 9367887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 40033803 - 40033748
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcac 164  Q
    |||||||| ||||||||||||||| || |||| |||  ||||||||||||||||||    
T  40033803 cttgcattgtttaatcatttaaaattttgtccctctccccacttaatcactgtcac 40033748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 64 - 165
Target Start/End: Complemental strand, 10770853 - 10770751
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtc 162  Q
    |||||||||||||  |||||||||| || ||||| || || |||  |||||| |  |||||||||||||| ||||||| |||  |||||||||||||| |    
T  10770853 tcatttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctctccccacttaatcactgcc 10770754  T
Q  163 acg 165  Q
    |||    
T  10770753 acg 10770751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 46475128 - 46475063
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||| || |||||||||||||| |||||||||    | |||||||||||| |||||||||||||    
T  46475128 cttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 46475063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 113 - 185
Target Start/End: Complemental strand, 40506130 - 40506058
Alignment:
Q  113 cattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctgatgtgg 185  Q
    |||| ||||||||||||||| ||||||  |||   |||||||||||||||| || ||||||| | ||||||||    
T  40506130 cattatttaatcatttaaaatttcgtctctctccgcacttaatcactgtcatgtaactaatttgatgatgtgg 40506058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 1e-21; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 67 - 269
Target Start/End: Original strand, 26463217 - 26463409
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    ||||||||||  |||||||| |||| ||||| || ||||||  ||||||   ||||||||||||||| ||||||| || | ||| |||||||||| ||||    
T  26463217 tttaaaaattggtccctgtattcgttaatcctggcaaattacccttgcaaagtttaatcatttaaaatttcgtccctcatcccagttaatcactgccacg 26463316  T
Q  166 tcactaattagctgatgtggaacatctgatttcacatacaaacgagaaaggacaaaaatgcccttgatttcatcttccttctccctattctttctcgtgt 265  Q
    ||||| ||||           ||||||||||||||| | ||||  |||||||| ||||||||||||||||||||||  |||||| | |||||||||||||    
T  26463317 tcactgatta-----------acatctgatttcacagaaaaacatgaaaggacgaaaatgcccttgatttcatcttttttctccttcttctttctcgtgt 26463405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 67 - 174
Target Start/End: Original strand, 33517572 - 33517680
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    ||||||||||  ||||||||||||  ||||| || || |||  |||||||| ||||||||||||||| ||||||| |||  ||||||||||||||  |||    
T  33517572 tttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgctacg 33517671  T
Q  166 tcactaatt 174  Q
    |||||||||    
T  33517672 tcactaatt 33517680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 142
Target Start/End: Original strand, 31406913 - 31406992
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtcctt 142  Q
    |||||||||||||  ||||||||||||| ||||| ||||| || | |||||||| ||||||||||||||| |||||||||    
T  31406913 tcatttaaaaattagtccctgtaatcgttaatcctggtaatttgtccttgcattatttaatcatttaaaatttcgtcctt 31406992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 12080719 - 12080793
Alignment:
Q  111 tgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctgatgtgg 185  Q
    |||||| ||||||||||||||| ||||||| |||  |||||||||||||| || |||||||||| | ||||||||    
T  12080719 tgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaatttgatgatgtgg 12080793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 21628060 - 21627995
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| || |||| |||  |||||||||||||| |||||||||||||    
T  21628060 cttgcattgtttaatcatttaaaattttgtccctctccccacttaatcactgccacgtcactaatt 21627995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 31407269 - 31407164
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatccggtaaatt-attcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtc 162  Q
    |||||||||||||  ||||||||||||  ||||| |  |||| |  |||||||| ||||||||||||||| |||||||||    | ||||||||||||||    
T  31407269 tcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgtc 31407170  T
Q  163 acgtca 168  Q
    ||||||    
T  31407169 acgtca 31407164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 33647044 - 33647109
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||  |||  ||| |||||||||| |||||||||||||    
T  33647044 cttgcattatttaatcatttaaaatttcgtctctctccccatttaatcactgccacgtcactaatt 33647109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 173
Target Start/End: Original strand, 3059338 - 3059402
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaat 173  Q
    |||||||| ||||||||||||||| ||||||| |||   ||||||||||||| || |||||||||    
T  3059338 cttgcattgtttaatcatttaaaatttcgtccctctcctcacttaatcactgccatgtcactaat 3059402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 174
Target Start/End: Original strand, 30803899 - 30804007
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    |||||||||| |||  ||||||||| ||||| || || |||  ||| |||| ||||||||||||||| ||||||| |||  |||||||||||||| ||      
T  30803899 tttaaaaattgatctatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccatc 30803998  T
Q  166 tcactaatt 174  Q
    |||||||||    
T  30803999 tcactaatt 30804007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 142
Target Start/End: Original strand, 7160839 - 7160918
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtcctt 142  Q
    |||||||||||||  || |||||||||  ||||| || || ||| ||||||||| ||||||||||||||| |||||||||    
T  7160839 tcatttaaaaattagtctctgtaatcgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcctt 7160918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 165
Target Start/End: Original strand, 30337487 - 30337586
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    ||||||||||  ||||||||||||  ||||| || || |||  ||||||||  |||||||||||||| ||||||| |||  |||||||||||||| ||||    
T  30337487 tttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattggttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 30337586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 1215204 - 1215147
Alignment:
Q  118 tttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatta 175  Q
    |||||||| |||||| ||||||| | |  |||||||||||||| ||||||||||||||    
T  1215204 tttaatcacttaaaatttcgtccctatccccacttaatcactgccacgtcactaatta 1215147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 11392919 - 11392984
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||  |||  | |||||||||||| || ||||||||||    
T  11392919 cttgcattgtttaatcatttaaaatttcgtctatctcccaacttaatcactgccatgtcactaatt 11392984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 11434883 - 11434948
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||| || |||||||||||||| |||||||||    ||| |||||||||| |||||||||||||    
T  11434883 cttgcaatcattaatcatttaaaatttcgtcctttgacccagttaatcactgccacgtcactaatt 11434948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 21627794 - 21627859
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||| || |||||||||||||| |||||||||    | |||||||||||| |||||||||||||    
T  21627794 cttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 21627859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 30725840 - 30725905
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||| | ||||||||||||||| ||||||| |||  ||| |||||||||| || ||||||||||    
T  30725840 cttgcactgtttaatcatttaaaatttcgtccctctccccatttaatcactgccatgtcactaatt 30725905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 33517881 - 33517816
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||| || |||||||||||||| |||||||||    | |||||||||||| |||||||||||||    
T  33517881 cttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 33517816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 7905278 - 7905354
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtc 139  Q
    |||||||||||||  ||| ||||||||| ||||| || || |||  |||||||| ||||||||||||||| ||||||    
T  7905278 tcatttaaaaattagtccttgtaatcgttaatcctggcaatttacccttgcattatttaatcatttaaaatttcgtc 7905354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 67 - 174
Target Start/End: Complemental strand, 12081026 - 12080918
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatccg-gtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    ||||||||||| |||||||| |||  |||||  | ||| || ||||||| || |||||||||||||| |||||||||    | ||||||| ||||||| |    
T  12081026 tttaaaaatttgtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaattactgtcatg 12080927  T
Q  166 tcactaatt 174  Q
    |||||||||    
T  12080926 tcactaatt 12080918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 17734510 - 17734454
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    |||||||| ||||||||||||||| || |||| |||  |||||||||||||| ||||    
T  17734510 cttgcattgtttaatcatttaaaattttgtccctctccccacttaatcactgccacg 17734454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 30804207 - 30804143
Alignment:
Q  110 ttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    ||||| || |||||||||||||| |||||||||    | |||||||||||| |||||||||||||    
T  30804207 ttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 30804143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 31197207 - 31197290
Alignment:
Q  186 aacatctgatttcacatacaaacgagaaaggacaaaaatgcccttgatttcatcttccttctccctattctttctcgtgttctt 269  Q
    ||||||||||||| || ||||||  |||||||| ||||||||||||||||||||||| |||||| | |||||||||||||||||    
T  31197207 aacatctgatttcgcagacaaacatgaaaggacgaaaatgcccttgatttcatcttctttctccttcttctttctcgtgttctt 31197290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 4960621 - 4960686
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||| |||| |||||||||||||| |||||||||||||    
T  4960621 cttgcattgtttaatcatttaaaatttcgtccctcttcccacttaatcactgccacgtcactaatt 4960686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 17662197 - 17662132
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||| |||| |||||||||||||| |||||||||||||    
T  17662197 cttgcattgtttaatcatttaaaatttcgtccctcttcccacttaatcactgccacgtcactaatt 17662132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 109 - 185
Target Start/End: Original strand, 1103542 - 1103618
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctgatgtgg 185  Q
    |||||||| ||||||||||||||| ||||||| |||  ||||||||||||||||| |||||||||| | ||||||||    
T  1103542 cttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgtcactaatttgatgatgtgg 1103618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 67 - 174
Target Start/End: Original strand, 6367600 - 6367708
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    ||||||||||  ||||||||||||  ||||| || || |||  |||||||| ||||||||||||||| ||||||| |||  |||||||||||||| ||||    
T  6367600 tttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 6367699  T
Q  166 tcactaatt 174  Q
    |||||||||    
T  6367700 tcactaatt 6367708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 43758902 - 43758968
Alignment:
Q  108 tcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    ||||||||| ||||||||||||||| ||||||| ||| ||||||||||||||| || ||||||||||    
T  43758902 tcttgcattgtttaatcatttaaaatttcgtccctctctccacttaatcactgccatgtcactaatt 43758968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 14879052 - 14879117
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||| |||  ||||||||||||||||| ||||||||||    
T  14879052 cttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgtcactaatt 14879117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 190
Target Start/End: Complemental strand, 44523483 - 44523402
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctgatgtggaacat 190  Q
    |||||||| ||||||||||||||| ||| ||| ||  | ||||||||||||| ||||||||||||||||||| |||| ||||    
T  44523483 cttgcattgtttaatcatttaaaatttcatccctcccttcacttaatcactgccacgtcactaattagctgacgtggcacat 44523402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 109 - 185
Target Start/End: Original strand, 42248554 - 42248630
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctgatgtgg 185  Q
    |||||||| ||||||||||||||| ||||||| |||  |||||||||||||| ||||| ||||||| | ||||||||    
T  42248554 cttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtgactaatttgttgatgtgg 42248630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 172
Target Start/End: Complemental strand, 40210717 - 40210654
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaa 172  Q
    |||||||| ||||||||||||||| ||||||| |||  |||||||||||||| |||||||||||    
T  40210717 cttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaa 40210654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 22103844 - 22103787
Alignment:
Q  118 tttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatta 175  Q
    |||||||| |||||| ||||||| ||| ||||||||||||||| ||||||||||||||    
T  22103844 tttaatcacttaaaatttcgtccctctctccacttaatcactgccacgtcactaatta 22103787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 24009888 - 24009823
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||| |||  |||||||||||||| ||| |||||||||    
T  24009888 cttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacatcactaatt 24009823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 67 - 165
Target Start/End: Original strand, 25647922 - 25648021
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    ||||||||||  ||||||||||||| ||||| || || |||  | |||||| ||||||||||||||| ||||||| |||  |||||||||||||| ||||    
T  25647922 tttaaaaattggtccctgtaatcgttaatcctggcaatttacccctgcattatttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 25648021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 118 - 185
Target Start/End: Complemental strand, 27999189 - 27999122
Alignment:
Q  118 tttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctgatgtgg 185  Q
    ||||||||||| ||| ||||||  |||| |||||||||||||| ||| ||||||||| ||||||||||    
T  27999189 tttaatcattttaaatttcgtctctcttcccacttaatcactgccacctcactaatttgctgatgtgg 27999122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 118 - 185
Target Start/End: Complemental strand, 34850403 - 34850336
Alignment:
Q  118 tttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctgatgtgg 185  Q
    ||||||||||||||| ||| ||| |||  |||||||||||||| ||||||||| ||||||||| ||||    
T  34850403 tttaatcatttaaaatttcatccctctccccacttaatcactgccacgtcactgattagctgacgtgg 34850336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 183
Target Start/End: Complemental strand, 13300259 - 13300177
Alignment:
Q  101 aaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctgatgt 183  Q
    |||||| |||| ||||||||||| | |||||||||  ||||||   ||||||||||| || ||||||||| ||||||||||||    
T  13300259 aaattactcttacattctttaataacttaaaaattgatccttcaacccacttaatcagtgccacgtcactgattagctgatgt 13300177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 25065967 - 25065901
Alignment:
Q  119 ttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctgatgtgg 185  Q
    |||||||||||| | ||||||| ||| ||||||||||||||| ||| ||||| ||||||||| ||||    
T  25065967 ttaatcatttaagatttcgtccctctctccacttaatcactgccacctcactgattagctgacgtgg 25065901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 174
Target Start/End: Original strand, 30711403 - 30711473
Alignment:
Q  104 ttattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||| |||||||| ||||||||||||||| ||||||| ||   |||||||||||||| || ||||||||||    
T  30711403 ttatccttgcattgtttaatcatttaaaatttcgtccctcgccccacttaatcactgccatgtcactaatt 30711473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 32917340 - 32917406
Alignment:
Q  108 tcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    ||||||||| ||||||||||||||| ||||||  |||  |||||||||||||| ||| |||||||||    
T  32917340 tcttgcattgtttaatcatttaaaatttcgtctctctccccacttaatcactgccacatcactaatt 32917406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 13245940 - 13245997
Alignment:
Q  118 tttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatta 175  Q
    |||||||| |||||| || |||| |||  |||||||||||||||||||||||||||||    
T  13245940 tttaatcacttaaaattttgtccctctccccacttaatcactgtcacgtcactaatta 13245997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 13914414 - 13914349
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||| ||| ||||||||||||||| ||||||| |||  ||||| |||||||| |||||||||||||    
T  13914414 cttgtattgtttaatcatttaaaatttcgtccctctccccactaaatcactgccacgtcactaatt 13914349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 19017976 - 19017911
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| || |||| |||| |||||||||||||| | | |||||||||    
T  19017976 cttgcattatttaatcatttaaaattttgtccctcttcccacttaatcactgccgcatcactaatt 19017911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 21444684 - 21444741
Alignment:
Q  118 tttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatta 175  Q
    |||||||| |||||| ||||||| |||  |||||||||||||| ||||||||||||||    
T  21444684 tttaatcacttaaaatttcgtccatctccccacttaatcactgccacgtcactaatta 21444741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 40714479 - 40714584
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtc 162  Q
    |||||||||||||  ||||||||||||| ||||| || || |||  |||||||| ||||||||||||||| |||||| ||    | |||||||||||| |    
T  40714479 tcatttaaaaattagtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcatttgaccaacttaatcactgcc 40714578  T
Q  163 acgtca 168  Q
    ||||||    
T  40714579 acgtca 40714584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 46163111 - 46163176
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||  |||  ||||||||| ||||||| ||||||||||    
T  46163111 cttgcattgtttaatcatttaaaatttcgtctctctccccacttaattactgtcatgtcactaatt 46163176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 26024504 - 26024560
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    |||||||| ||||||||||||||| ||||||| |||  |||||||||||||| ||||    
T  26024504 cttgcattgtttaatcatttaaaagttcgtccctctccccacttaatcactgccacg 26024560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 40772545 - 40772637
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatccggtaaatt-attcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcac 158  Q
    ||||||||||  ||||||||||||  ||||| |  |||| | ||||||||| ||||||||||||||| ||||||| |||  ||||||||||||    
T  40772545 tttaaaaattggtccctgtaatcgctaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcac 40772637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 1841544 - 1841615
Alignment:
Q  113 cattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctgatgtg 184  Q
    |||| ||||||||||||||| ||||||  |||  |||||||||||||| || |||||||||| | |||||||    
T  1841544 cattgtttaatcatttaaaatttcgtcactctccccacttaatcactgccatgtcactaatttgatgatgtg 1841615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 142
Target Start/End: Original strand, 35038490 - 35038569
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtcctt 142  Q
    ||||||||||||| |||| ||||||||| |||||  | |||||| | ||| ||| ||||||||||||||| |||||||||    
T  35038490 tcatttaaaaattgatccatgtaatcgttaatcctagcaaattacttttgtattgtttaatcatttaaaatttcgtcctt 35038569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 174
Target Start/End: Complemental strand, 37578529 - 37578474
Alignment:
Q  119 ttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||||||||| ||||||  |||  |||||||||||||| |||||||||||||    
T  37578529 ttaatcatttaaaatttcgtcactctccccacttaatcactgccacgtcactaatt 37578474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 183536 - 183482
Alignment:
Q  111 tgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    |||||| ||||||||||||||| ||||||| |||  |||||||||||||| ||||    
T  183536 tgcattatttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 183482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 140
Target Start/End: Original strand, 17691257 - 17691331
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatccg-gtaaattattcttgcattctttaatcatttaaaaattcgtcc 140  Q
    ||||||||||  ||||||||||||  |||||  | |||||| ||||||||| ||||||||||||||| |||||||    
T  17691257 tttaaaaattggtccctgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaatttcgtcc 17691331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 48779467 - 48779401
Alignment:
Q  108 tcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    ||||||| || |||||||||||||| |||||||||    | |||||||||||| |||||||||||||    
T  48779467 tcttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 48779401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 1103809 - 1103732
Alignment:
Q  108 tcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctgatgtgg 185  Q
    ||||||| || |||||||||||||| |||||||||    | ||||| |||||| ||||||||||||| | ||||||||    
T  1103809 tcttgcaatcattaatcatttaaaatttcgtcctttgaccaacttattcactgccacgtcactaatttgatgatgtgg 1103732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 1841806 - 1841741
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||| || |||||||||||||| |||||||||    | |||||||||||| |||||||||||||    
T  1841806 cttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 1841741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 6367909 - 6367844
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||| || |||||||||||||| |||||||||    | |||||||||||| |||||||||||||    
T  6367909 cttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 6367844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 7821035 - 7821100
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| |||||||||    | || ||||||||| |||||||||||||    
T  7821035 cttgcattgtttaatcatttaaaatttcgtcctttgaccaacgtaatcactgccacgtcactaatt 7821100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 174
Target Start/End: Original strand, 13914141 - 13914214
Alignment:
Q  101 aaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||| ||||||| || |||||||||||||| |||||||||    | |||||||||||  |||||||||||||    
T  13914141 aaattagtcttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactaccacgtcactaatt 13914214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 34464796 - 34464731
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||| | ||||||||||||||| || |||| |||  |||||||||||||| || ||||||||||    
T  34464796 cttgcaatgtttaatcatttaaaattttgtccctctccccacttaatcactgccatgtcactaatt 34464731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 35152690 - 35152625
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||| || |||||||||||||| |||||||||    | |||||||||||||||| |||||||||    
T  35152690 cttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgtcacatcactaatt 35152625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 17188989 - 17189065
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtc 139  Q
    |||||||||||||  ||||||||||||  ||||| || || |||  |||||||| ||||||||||||||| ||||||    
T  17188989 tcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattatttaatcatttaaaatttcgtc 17189065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 6e-17; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 4406007 - 4405942
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||| | ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||    
T  4406007 cttgcaatgtttaatcatttaaaatttcgtccctcttcccacttaatcactgtcacgtcactaatt 4405942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 67 - 160
Target Start/End: Complemental strand, 12273243 - 12273149
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatccggtaaatt-attcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactg 160  Q
    ||||||||||  ||||||||||||| ||||| || |||| |  |||||||| ||||||||||||||| ||||||| |||| ||||||||||||||    
T  12273243 tttaaaaattggtccctgtaatcgttaatcccgtcaatttacccttgcattgtttaatcatttaaaatttcgtccctcttcccacttaatcactg 12273149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 16388873 - 16388808
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||| |||  |||||||||||||| |||||||||||||    
T  16388873 cttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatt 16388808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 36928557 - 36928622
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||| |||  |||||||||||||| |||||||||||||    
T  36928557 cttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatt 36928622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 23698634 - 23698535
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    ||||||||||  ||||||||||||  ||||| || || |||  |||||||| ||||||||||||||| ||||||| |||  |||||||||||||||||||    
T  23698634 tttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgtcacg 23698535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 13186141 - 13186206
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||  |||  |||||||||||||| |||||||||||||    
T  13186141 cttgcattgtttaatcatttaaaatttcgtctctctccccacttaatcactgccacgtcactaatt 13186206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 110 - 183
Target Start/End: Original strand, 30459453 - 30459526
Alignment:
Q  110 ttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctgatgt 183  Q
    |||||||||||||||| ||||||||| |||||||   |||||||| || ||||| |||||| ||||||||||||    
T  30459453 ttgcattctttaatcacttaaaaattggtccttcaacccacttaaccagtgtcatgtcactgattagctgatgt 30459526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 31608860 - 31608795
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| | ||||||||||||| ||||||| |||  |||||||||||||| |||||||||||||    
T  31608860 cttgcattgtctaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatt 31608795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 39071757 - 39071822
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||| |||  |||||||||||||| | |||||||||||    
T  39071757 cttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccgcgtcactaatt 39071822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 40318311 - 40318246
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| |||||||||||   ||||||||||||| || ||||||||||    
T  40318311 cttgcattgtttaatcatttaaaatttcgtccttctcctcacttaatcactgccatgtcactaatt 40318246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 174
Target Start/End: Original strand, 35756658 - 35756728
Alignment:
Q  104 ttattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||| |||| ||| ||||||||||||||| ||||||| |||  |||||||||||||| || ||||||||||    
T  35756658 ttatccttgaattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaatt 35756728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 35634490 - 35634385
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatccggtaaatt-attcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtc 162  Q
    |||||||||||||  ||||||||||||  ||||| |  |||| |  |||||||| ||||||||||||||| |||||||||    | ||||||||||||||    
T  35634490 tcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcctttaaccaacttaatcactgtc 35634391  T
Q  163 acgtca 168  Q
    ||||||    
T  35634390 acgtca 35634385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 38956019 - 38955954
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||| || |||||||||||||| || ||||||   || ||||||||||||||||||||||||||    
T  38956019 cttgcaatcattaatcatttaaaatttagtcctttgatcaacttaatcactgtcacgtcactaatt 38955954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 44664543 - 44664648
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtc 162  Q
    |||||||||||||  ||||||||||||| ||||| || || |||  |||||||| ||||||||||||||| |||||| ||    | |||||||||||| |    
T  44664543 tcatttaaaaattagtccctgtaatcgttaatcctggcaatttaaccttgcattgtttaatcatttaaaatttcgtcatttgaccaacttaatcactgcc 44664642  T
Q  163 acgtca 168  Q
    ||||||    
T  44664643 acgtca 44664648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 159
Target Start/End: Complemental strand, 234131 - 234035
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcact 159  Q
    |||||||||||||  |||||||||| || ||||| || || |||  |||||||| ||||||||||||||| |||||||||   || |||||||||||    
T  234131 tcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgatcaacttaatcact 234035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 159
Target Start/End: Complemental strand, 710542 - 710446
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcact 159  Q
    |||||||||||||  |||||||||| || ||||| || || |||  |||||||| ||||||||||||||| |||||||||   || |||||||||||    
T  710542 tcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgatcaacttaatcact 710446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 159
Target Start/End: Complemental strand, 747754 - 747658
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcact 159  Q
    |||||||||||||  |||||||||| || ||||| || || |||  |||||||| ||||||||||||||| |||||||||   || |||||||||||    
T  747754 tcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgatcaacttaatcact 747658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 159
Target Start/End: Complemental strand, 871649 - 871553
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcact 159  Q
    |||||||||||||  |||||||||| || ||||| || || |||  |||||||| ||||||||||||||| |||||||||   || |||||||||||    
T  871649 tcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgatcaacttaatcact 871553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 8316935 - 8316879
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    |||||||| ||||||||||||||| ||||||| |||  |||||||||||||| ||||    
T  8316935 cttgcattgtttaatcatttaaaatttcgtccatctccccacttaatcactgccacg 8316879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 23663861 - 23663805
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    |||||||| ||||||||||||||| ||||||| |||  |||||||||||||| ||||    
T  23663861 cttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 23663805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 168
Target Start/End: Original strand, 6471771 - 6471830
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtca 168  Q
    |||||||| ||||||||||||||| |||||| || | || |||||||||||| |||||||    
T  6471771 cttgcattgtttaatcatttaaaatttcgtctttttatcaacttaatcactgccacgtca 6471830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 142
Target Start/End: Original strand, 7983463 - 7983542
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtcctt 142  Q
    |||||||||||||  ||||||||||||  ||||| || || |||  |||||||| ||||||||||||||| |||||||||    
T  7983463 tcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctt 7983542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 22890330 - 22890275
Alignment:
Q  120 taatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatta 175  Q
    |||||| |||||| || |||| |||| |||||||||||||||||| ||||||||||    
T  22890330 taatcacttaaaattttgtccctcttcccacttaatcactgtcacatcactaatta 22890275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 1425367 - 1425313
Alignment:
Q  111 tgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    |||||| ||||||||||||||| ||||||| |||  |||||||||||||| ||||    
T  1425367 tgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 1425313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 38862700 - 38862750
Alignment:
Q  110 ttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactg 160  Q
    ||||||| ||||||||||||||| ||||||| |||  ||||||||||||||    
T  38862700 ttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactg 38862750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 4995004 - 4994939
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||| ||| ||||||| |||  ||||||||||  ||||| ||||||||||    
T  4995004 cttgcattgtttaatcatttcaaatttcgtccctctccccacttaatccatgtcatgtcactaatt 4994939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 10445726 - 10445621
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtc 162  Q
    |||||||||||||  ||||||||||||  ||||| || || |||  |||||||| ||||||||||||||| |||||| ||    | |||||||||||| |    
T  10445726 tcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcttttgaccaacttaatcactgcc 10445627  T
Q  163 acgtca 168  Q
    ||||||    
T  10445626 acgtca 10445621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 24085864 - 24085921
Alignment:
Q  118 tttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatta 175  Q
    |||||||  |||||| || |||| |||  |||||||||||||||||||||||||||||    
T  24085864 tttaatcgcttaaaattttgtccctctccccacttaatcactgtcacgtcactaatta 24085921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 142
Target Start/End: Complemental strand, 34061675 - 34061642
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtcctt 142  Q
    |||||||||||||||||||||||| |||||||||    
T  34061675 cttgcattctttaatcatttaaaatttcgtcctt 34061642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 36928823 - 36928758
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||| || |||||||||||||| |||||||||    | |||||||||||| |||||||||||||    
T  36928823 cttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 36928758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 2534775 - 2534827
Alignment:
Q  108 tcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactg 160  Q
    ||||||||| ||||||||||||||| ||||||| | || ||| ||||||||||    
T  2534775 tcttgcattgtttaatcatttaaaatttcgtccctattcccagttaatcactg 2534827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 159
Target Start/End: Original strand, 15229966 - 15230062
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcact 159  Q
    |||||||||||||  ||||||||||||  ||||| || || |||  |||| ||| ||||||||||||||| |||||||||   || |||||||||||    
T  15229966 tcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttggattgtttaatcatttaaaatttcgtcctttgatcaacttaatcact 15230062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 22915705 - 22915649
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    |||||||| ||||||||||||||| | ||||| |||  |||||||||||||| ||||    
T  22915705 cttgcattgtttaatcatttaaaattccgtccctctccccacttaatcactgccacg 22915649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 108 - 168
Target Start/End: Original strand, 34176521 - 34176581
Alignment:
Q  108 tcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtca 168  Q
    ||||||||||||||||||||||||| ||| |||||    ||| ||||||||||||| ||||    
T  34176521 tcttgcattctttaatcatttaaaatttcatcctttgacccagttaatcactgtcaggtca 34176581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 36186413 - 36186349
Alignment:
Q  110 ttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    ||||||| ||||||||||||||| ||||||| |||  | |||||||||||| ||| | |||||||    
T  36186413 ttgcattgtttaatcatttaaaatttcgtccctctccctacttaatcactgccacattactaatt 36186349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 6e-17; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 23181341 - 23181276
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||||||    
T  23181341 cttgcattgtttaatcatttaaaatttcgtccctctctccacttaatcactgtcatgtcactaatt 23181276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 67 - 174
Target Start/End: Original strand, 10935832 - 10935940
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    ||||||||||  ||||||||||||  ||||| || || |||  |||||||| ||||||||||||||| ||||||| ||| ||||||||||||||| || |    
T  10935832 tttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctctccacttaatcactgccatg 10935931  T
Q  166 tcactaatt 174  Q
    |||||||||    
T  10935932 tcactaatt 10935940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 67 - 174
Target Start/End: Complemental strand, 28469398 - 28469290
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    ||||||||||  ||||||||||||| ||||| || || |||  |||||||| ||||||||||||||| ||||||| |||  |||||||||||||  ||||    
T  28469398 tttaaaaattggtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactaccacg 28469299  T
Q  166 tcactaatt 174  Q
    |||||||||    
T  28469298 tcactaatt 28469290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 32053489 - 32053425
Alignment:
Q  110 ttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    ||||||| ||||||||||||||| ||||||| |||  ||||||||||||||||||||||||||||    
T  32053489 ttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgtcacgtcactaatt 32053425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 2640525 - 2640460
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||  |||  ||||||||||||||||| ||||||||||    
T  2640525 cttgcattgtttaatcatttaaaatttcgtctctctccccacttaatcactgtcatgtcactaatt 2640460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 45010679 - 45010744
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||| |||  |||||||||||||| || ||||||||||    
T  45010679 cttgcattgtttaatcatttaaaatttcgtccatctccccacttaatcactgccaagtcactaatt 45010744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 3914220 - 3914284
Alignment:
Q  110 ttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    ||||||| ||||||||||||||| ||||||| |||| | |||||||||||| ||| |||||||||    
T  3914220 ttgcattgtttaatcatttaaaatttcgtccctcttccaacttaatcactgccacatcactaatt 3914284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 118 - 185
Target Start/End: Complemental strand, 5457245 - 5457178
Alignment:
Q  118 tttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctgatgtgg 185  Q
    ||||||||||||||| ||||||| || | ||| |||||||||| ||||||||| ||||||||| ||||    
T  5457245 tttaatcatttaaaatttcgtccctcatcccagttaatcactgccacgtcactgattagctgacgtgg 5457178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 67 - 165
Target Start/End: Original strand, 6571051 - 6571150
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatccggtaaatt-attcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    ||||||||||  ||||||||||||| ||||| |  |||| |  |||||||| ||||||||||||||| || |||| |||  |||||||||||||||||||    
T  6571051 tttaaaaattggtccctgtaatcgttaatcctgacaatttacccttgcattgtttaatcatttaaaattttgtccctctccccacttaatcactgtcacg 6571150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 42731502 - 42731565
Alignment:
Q  111 tgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||| ||||||||||||||| ||||||| |||  |||||||||||||| || ||||||||||    
T  42731502 tgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaatt 42731565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 180
Target Start/End: Original strand, 11397468 - 11397530
Alignment:
Q  118 tttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctga 180  Q
    ||||||||||||||| || |||  || | ||| ||||||||||||||||||||||||||||||    
T  11397468 tttaatcatttaaaatttagtctctcatcccaattaatcactgtcacgtcactaattagctga 11397530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 45915817 - 45915751
Alignment:
Q  119 ttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctgatgtgg 185  Q
    |||||||||||||| | ||||| |||||||  |||||||||| ||||||||| ||||||||| ||||    
T  45915817 ttaatcatttaaaattccgtccctctttccgattaatcactgccacgtcactgattagctgacgtgg 45915751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 101 - 174
Target Start/End: Original strand, 2640251 - 2640324
Alignment:
Q  101 aaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||| ||||||| || |||||||||||||| |||||||||    | |||||||||||| |||||||||||||    
T  2640251 aaattagtcttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 2640324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 27396940 - 27396883
Alignment:
Q  111 tgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtca 168  Q
    |||||| ||||||||||||||| ||||||| |||  |||||||||||||| |||||||    
T  27396940 tgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtca 27396883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 42618302 - 42618197
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtc 162  Q
    |||||||||||||  | ||||||||||  ||||| || || |||  |||||||| ||||||||||||||| |||||||||    | ||||||||||||||    
T  42618302 tcatttaaaaattagttcctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgtc 42618203  T
Q  163 acgtca 168  Q
    ||||||    
T  42618202 acgtca 42618197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 40379859 - 40379915
Alignment:
Q  118 tttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    ||||||||||||||| ||||||| |||  ||||||||||| || |||||||||||||    
T  40379859 tttaatcatttaaaatttcgtccctctccccacttaatcaatgccacgtcactaatt 40379915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 185
Target Start/End: Complemental strand, 48789150 - 48789074
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctgatgtgg 185  Q
    |||||||| ||||||||||||||| ||| ||| |||  |||||| |||| ||||| |||||||||| | ||||||||    
T  48789150 cttgcattgtttaatcatttaaaatttcatccctctccccacttgatcattgtcatgtcactaatttgatgatgtgg 48789074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 157
Target Start/End: Original strand, 6253509 - 6253600
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatca 157  Q
    ||||||||||  ||||||||||||  ||||| || || |||  | |||||| ||||||||||||||| ||||||| ||| ||||||||||||    
T  6253509 tttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctctccacttaatca 6253600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 165
Target Start/End: Original strand, 17102058 - 17102157
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    ||||||||||  ||||||||||||  ||||| || || |||  | |||||| ||||||||||||||| ||||||| |||  |||||||||||||| ||||    
T  17102058 tttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 17102157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 165
Target Start/End: Original strand, 27991777 - 27991876
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    |||| ||||| |||||||||||||  ||||| || || |||  | |||||| ||||||||||||||| ||||||| |||  |||||||||||||| ||||    
T  27991777 tttagaaattgatccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 27991876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 32299095 - 32298996
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    ||||||||||  ||||||||||||  ||||| || || |||  |||||||| |||||||||| |||| ||||||| |||  |||||||||||||| ||||    
T  32299095 tttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattgaaaatttcgtccctctccccacttaatcactgccacg 32298996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 140
Target Start/End: Original strand, 33808396 - 33808435
Alignment:
Q  101 aaattattcttgcattctttaatcatttaaaaattcgtcc 140  Q
    |||||| ||||||||||||||||||||||||| |||||||    
T  33808396 aaattagtcttgcattctttaatcatttaaaatttcgtcc 33808435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 38643641 - 38643696
Alignment:
Q  119 ttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||||||| | ||||||| |||  ||||||||| ||||||||||||||||||    
T  38643641 ttaatcatttaagatttcgtccctctccccacttaattactgtcacgtcactaatt 38643696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 168
Target Start/End: Complemental strand, 43124499 - 43124440
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtca 168  Q
    |||||||| ||||||||||||||| ||||||| | || ||| |||||||||| |||||||    
T  43124499 cttgcattgtttaatcatttaaaatttcgtccctattcccagttaatcactgccacgtca 43124440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 6253788 - 6253722
Alignment:
Q  108 tcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    ||||||| || |||||||||||||| || ||||||    | ||||||||||||||||||||||||||    
T  6253788 tcttgcaatcattaatcatttaaaatttagtcctttgaccaacttaatcactgtcacgtcactaatt 6253722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 109 - 167
Target Start/End: Complemental strand, 45010951 - 45010893
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtc 167  Q
    |||||||| ||||||||||||||| ||||||  |||  |||||||||||||| ||||||    
T  45010951 cttgcattgtttaatcatttaaaatttcgtctctctccccacttaatcactgccacgtc 45010893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 4226216 - 4226265
Alignment:
Q  119 ttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtca 168  Q
    |||||||||||||| |||||||||||| ||  |||||||||| |||||||    
T  4226216 ttaatcatttaaaatttcgtccttcttcccggttaatcactgccacgtca 4226265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 17885709 - 17885774
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||| || |||||||||||||| |||||||||    ||| |||||||||| |||||||||||||    
T  17885709 cttgcaatcattaatcatttaaaatttcgtcctttgacccagttaatcactgccacgtcactaatt 17885774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 37656933 - 37656998
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| |||| | |||||||| ||||||| |||  |||||||||||| | |||||||||||||    
T  37656933 cttgcattgtttatttatttaaaatttcgtccctctccccacttaatcaccggcacgtcactaatt 37656998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 142
Target Start/End: Original strand, 42362531 - 42362564
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtcctt 142  Q
    |||||||||||||||||||||||| |||||||||    
T  42362531 cttgcattctttaatcatttaaaatttcgtcctt 42362564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 46205700 - 46205595
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatccggt-aaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtc 162  Q
    ||||||||| |||  | ||||||||||| ||||| |  ||||||  |||||||| ||||||||||||||| |||||||||    | ||||||||||| ||    
T  46205700 tcatttaaagattggttcctgtaatcgttaatcctgacaaattacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactatc 46205601  T
Q  163 acgtca 168  Q
    ||||||    
T  46205600 acgtca 46205595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 139
Target Start/End: Complemental strand, 23058820 - 23058744
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtc 139  Q
    ||||||||||||| |||| ||||||||| ||||| || || |||  || ||||| ||||||||||||||| ||||||    
T  23058820 tcatttaaaaattaatccttgtaatcgttaatcctggcaatttaccctcgcattgtttaatcatttaaaatttcgtc 23058744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 185
Target Start/End: Complemental strand, 33809459 - 33809375
Alignment:
Q  101 aaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctgatgtgg 185  Q
    |||||| |||| ||||||||||| |||||||| ||| |||||   |||| ||||| |||| ||||||| ||||| | ||||||||    
T  33809459 aaattagtcttacattctttaattatttaaaatttcatcctttgatccagttaatgactgacacgtcattaatttgatgatgtgg 33809375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 67 - 174
Target Start/End: Original strand, 13962902 - 13963010
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    ||||||||||  |||||||||| |  ||||| ||||| |||  |||||||| ||||||||||||||| ||||||| |||   ||||||||||||||||||    
T  13962902 tttaaaaattggtccctgtaattgctaatcctggtaatttacccttgcattgtttaatcatttaaaatttcgtccctctcctcacttaatcactgtcacg 13963001  T
Q  166 tcactaatt 174  Q
    |||||||||    
T  13963002 tcactaatt 13963010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 67 - 174
Target Start/End: Original strand, 32242280 - 32242388
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    |||||||||| ||||||||||| |  ||||  || || ||| ||||||||| ||||||||||||||| ||||||| |||  |||||||||||||| ||||    
T  32242280 tttaaaaattgatccctgtaatagctaatcatggcaatttactcttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 32242379  T
Q  166 tcactaatt 174  Q
    |||||||||    
T  32242380 tcactaatt 32242388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 19892655 - 19892590
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| |||||| ||||  |||||||||||||| |||||||||||||    
T  19892655 cttgcattgtttaatcatttaaaatttcgtcattctccccacttaatcactgccacgtcactaatt 19892590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 29646709 - 29646644
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||| |||  ||||||||||||||||| ||||||||||    
T  29646709 cttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgtcactaatt 29646644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 67 - 174
Target Start/End: Original strand, 35512186 - 35512294
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    ||||||||||  ||||||||||||  ||||| || || |||  |||||||| ||||||||||||||| ||||||| |||  |||||||||||||| |||     
T  35512186 tttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccaca 35512285  T
Q  166 tcactaatt 174  Q
    |||||||||    
T  35512286 tcactaatt 35512294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 104 - 174
Target Start/End: Original strand, 8322480 - 8322550
Alignment:
Q  104 ttattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||| |||||||| ||||||||||||||| ||||||| |||  |||||||||||||||||  |||||||||    
T  8322480 ttatccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgtcatttcactaatt 8322550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 5993970 - 5994035
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||| |||  |||||||||||||| || ||||||||||    
T  5993970 cttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaatt 5994035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 39453381 - 39453446
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||| |||  |||||||||||||| || ||||||||||    
T  39453381 cttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactggcatgtcactaatt 39453446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 181
Target Start/End: Original strand, 5255072 - 5255170
Alignment:
Q  83 tgtaatcgtcaatccggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctgat 181  Q
    ||||||||  ||||| | ||||||  ||||||||  |||||||||||||| |||||| ||    | ||||||||||||||||||||||||| |||||||    
T  5255072 tgtaatcgctaatcctgcaaattaaccttgcatttattaatcatttaaaatttcgtcatttgaccaacttaatcactgtcacgtcactaatcagctgat 5255170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 38442148 - 38442214
Alignment:
Q  108 tcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    ||||||||| ||||||||||||||| ||||||| |||  |||||||||||||| ||| | |||||||    
T  38442148 tcttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacataactaatt 38442214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 8875484 - 8875589
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtc 162  Q
    |||||||||||||  ||||||||||||| ||||| || || |||  |||||||| ||||||||||||||| ||||| |||    | |||||||||||| |    
T  8875484 tcatttaaaaattagtccctgtaatcgttaatcctggcaatttacacttgcattgtttaatcatttaaaatttcgttctttgaccaacttaatcactgcc 8875583  T
Q  163 acgtca 168  Q
    ||||||    
T  8875584 acgtca 8875589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 11047518 - 11047583
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||  |||  |||||||||||||| || ||||||||||    
T  11047518 cttgcattgtttaatcatttaaaatttcgtctctctccccacttaatcactgccatgtcactaatt 11047583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 14194770 - 14194705
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||| |||  ||||||||||||||  | ||||||||||    
T  14194770 cttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgctatgtcactaatt 14194705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 20840614 - 20840679
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| |||||| |||||||| || |||| |||  |||||||||||||| |||||||||||||    
T  20840614 cttgcattgtttaatgatttaaaattttgtccctctccccacttaatcactgccacgtcactaatt 20840679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 67 - 163
Target Start/End: Complemental strand, 35920574 - 35920477
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatccggtaaatt-attcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtca 163  Q
    ||||||||||  ||||||||||||  ||||| |  |||| || ||| |||| ||||||||||||||| ||||||| |||  |||||||||||||||||    
T  35920574 tttaaaaattggtccctgtaatcgctaatcctgacaatttatccttccattgtttaatcatttaaaatttcgtccctctccccacttaatcactgtca 35920477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 5024364 - 5024300
Alignment:
Q  110 ttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    ||||||| ||||||||||||||| ||||| | |||  |||||||||||||| ||| |||||||||    
T  5024364 ttgcattgtttaatcatttaaaatttcgttcctctccccacttaatcactgccacatcactaatt 5024300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 12904844 - 12904900
Alignment:
Q  118 tttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||| |||||||| ||||||| |||  ||||||||||| ||||||||||||||||    
T  12904844 tttaataatttaaaatttcgtccctctccccacttaatcaatgtcacgtcactaatt 12904900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 169
Target Start/End: Complemental strand, 24547472 - 24547412
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcac 169  Q
    |||||||| ||||||||||||||| ||||||| |||  |||||||| ||||| ||||||||    
T  24547472 cttgcattgtttaatcatttaaaatttcgtccctctccccacttaaccactgccacgtcac 24547412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 3529232 - 3529133
Alignment:
Q  67 tttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    ||||||||||  ||||||||||||| ||||| || || |||  | | |||| ||||||||||||||| ||||||| |||  |||||||||||||| ||||    
T  3529232 tttaaaaattggtccctgtaatcgttaatcctggcaatttacccctacattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 3529133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 168
Target Start/End: Complemental strand, 11741864 - 11741805
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtca 168  Q
    |||||||||||||||||||||||| |||||||||    ||| ||||||||||||| ||||    
T  11741864 cttgcattctttaatcatttaaaatttcgtcctttgacccagttaatcactgtcaggtca 11741805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 28269735 - 28269684
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactg 160  Q
    |||||||| ||||||||||||||| ||||||| |||  ||||||||||||||    
T  28269735 cttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactg 28269684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 38475346 - 38475295
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactg 160  Q
    |||||||| ||||||||||||||| ||||||| |||  ||||||||||||||    
T  38475346 cttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactg 38475295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 16156935 - 16157001
Alignment:
Q  108 tcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    ||||||| || |||||||||||||| |||||||||    | |||||||||||| |||||||||||||    
T  16156935 tcttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 16157001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 186500 - 186565
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| ||||||| ||   |||||||||||||  || ||||||||||    
T  186500 cttgcattgtttaatcatttaaaatttcgtccctccccccacttaatcactaccatgtcactaatt 186565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 186766 - 186701
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||| || |||||||||||||| |||||||||    | ||||||||| ||||||||||||||||    
T  186766 cttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcattgtcacgtcactaatt 186701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 228
Target Start/End: Original strand, 5255166 - 5255203
Alignment:
Q  191 ctgatttcacatacaaacgagaaaggacaaaaatgccc 228  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  5255166 ctgatttcacatacaaacgtgaaaggactaaaatgccc 5255203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 157
Target Start/End: Original strand, 6150534 - 6150583
Alignment:
Q  108 tcttgcattctttaatcatttaaaaattcgtccttctttccacttaatca 157  Q
    ||||||||| ||||||||||||||| ||||||| |||  |||||||||||    
T  6150534 tcttgcattgtttaatcatttaaaatttcgtccctctccccacttaatca 6150583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 6150767 - 6150702
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||| || |||||||||||||| |||||||||    | |||||||||||| |||||||||||||    
T  6150767 cttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 6150702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 11047784 - 11047719
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||| || |||||||||||||| |||||||||    | |||||||||||| |||||||||||||    
T  11047784 cttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 11047719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 11740768 - 11740833
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||||||||||||||||||| || ||||||    ||| ||||| |||||||||||| |||||    
T  11740768 cttgcattctttaatcatttaaaattttgtcctttgacccagttaatgactgtcacgtcattaatt 11740833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 16157202 - 16157137
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| || |||| |||  |||||||||| ||| || ||||||||||    
T  16157202 cttgcattgtttaatcatttaaaattttgtccctctccccacttaatccctgccatgtcactaatt 16157137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 17202480 - 17202545
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||| ||||||||| |||||||  ||  |||||||||||||| || ||||||||||    
T  17202480 cttgcattgtttaagcatttaaaatttcgtccccctccccacttaatcactgccatgtcactaatt 17202545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 17202747 - 17202670
Alignment:
Q  108 tcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctgatgtgg 185  Q
    ||||||| || |||||||||||||| |||||| ||    | |||||||||||| ||||||||||||| | ||||||||    
T  17202747 tcttgcaatcattaatcatttaaaatttcgtcatttgaccaacttaatcactgccacgtcactaattcgatgatgtgg 17202670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 17544439 - 17544334
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtc 162  Q
    |||||||||||||  | ||||||||||| ||||| || || |||  |||||||| ||||||||||||||| || ||||||    | ||||||||||||||    
T  17544439 tcatttaaaaattagttcctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaattttgtcctttgaccaacttaatcactgtc 17544340  T
Q  163 acgtca 168  Q
    | ||||    
T  17544339 aagtca 17544334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 18247165 - 18247230
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| |||||||||||| || ||||||| |||  |||||||||||| | || ||||||||||    
T  18247165 cttgcattatttaatcatttagaatttcgtccctctccccacttaatcaccgccatgtcactaatt 18247230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 20814482 - 20814417
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||| ||||||||||||||| || |||| |||  | |||||||||||| || ||||||||||    
T  20814482 cttgcattgtttaatcatttaaaattttgtccctctccctacttaatcactgccatgtcactaatt 20814417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 28269503 - 28269568
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||| || |||||||||||||| |||||||||    | |||||||||||| |||||||||||||    
T  28269503 cttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 28269568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 39453646 - 39453581
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||| || |||||||||||||| |||||||||    | |||||||||||| |||||||||||||    
T  39453646 cttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 39453581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 43159161 - 43159096
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||| || |||||||||||||| |||||||||    | |||||||||||| |||||||||||||    
T  43159161 cttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 43159096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 109 - 185
Target Start/End: Complemental strand, 11762064 - 11761988
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctgatgtgg 185  Q
    |||||| || |||||||||||||| || ||||||    | |||||||||||| ||||||||||||| | ||||||||    
T  11762064 cttgcaatcattaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtcactaatttgatgatgtgg 11761988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 109 - 157
Target Start/End: Original strand, 18670280 - 18670328
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatca 157  Q
    |||||||| ||||||||||||||| ||||||| |||  |||||||||||    
T  18670280 cttgcattgtttaatcatttaaaatttcgtccatctccccacttaatca 18670328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 20814217 - 20814281
Alignment:
Q  110 ttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    ||||| || |||||||||||||| |||||||||    | |||||||||||| |||||||||||||    
T  20814217 ttgcaatcattaatcatttaaaatttcgtcctttaaccaacttaatcactgccacgtcactaatt 20814281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 64 - 174
Target Start/End: Original strand, 69000 - 69111
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtc 162  Q
    |||||||||||||  |||||||||||   ||||| || || |||  |||||||| ||||||||||||||| ||||||| |||  |||||||||||||| |    
T  69000 tcatttaaaaattggtccctgtaatcactaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgcc 69099  T
Q  163 acgtcactaatt 174  Q
    ||||||||||||    
T  69100 acgtcactaatt 69111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 37910 - 37845
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||| ||| ||||||||||||||| ||||||| |||  |||||||||||||| |||||||||||||    
T  37910 cttgtattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatt 37845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 37641 - 37710
Alignment:
Q  105 tattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    |||||||||| || |||||||||||||| |||||||||    | |||||||||||| ||| |||||||||    
T  37641 tattcttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacatcactaatt 37710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 12630 - 12525
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtc 162  Q
    |||||||||||||  ||||||||||||| ||||| || || |||  |||||||| ||||||||||||||| ||||| |||    | |||||||||||| |    
T  12630 tcatttaaaaattagtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgttctttgacctacttaatcactgcc 12531  T
Q  163 acgtca 168  Q
    ||||||    
T  12530 acgtca 12525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 1850 - 1906
Alignment:
Q  109 cttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacg 165  Q
    |||||||| ||||||||||||||| ||||||| |||  |||||||||||||| ||||    
T  1850 cttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 1906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 14602 - 14536
Alignment:
Q  119 ttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaattagctgatgtgg 185  Q
    |||||||||||| | ||||||| |||  |||||||||||||| ||| ||||| ||||||||| ||||    
T  14602 ttaatcatttaagatttcgtccctctccccacttaatcactgccacatcactgattagctgacgtgg 14536  T

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Target: scaffold0328 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 11531 - 11426
Alignment:
Q  64 tcatttaaaaatttatccctgtaatcgtcaatcc-ggtaaattattcttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtc 162  Q
    |||||||||||||  ||| ||||||||| ||||| || || |||  |||||||| ||||||||||||||| |||||| ||    | |||||||||||| |    
T  11531 tcatttaaaaattagtccatgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcttttgaccaacttaatcactgcc 11432  T
Q  163 acgtca 168  Q
    ||||||    
T  11431 acgtca 11426  T

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Target: scaffold0295 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 2225 - 2289
Alignment:
Q  110 ttgcattctttaatcatttaaaaattcgtccttctttccacttaatcactgtcacgtcactaatt 174  Q
    ||||||| ||||||||||||||| || |||| |||  |||||||||||||| || |||| |||||    
T  2225 ttgcattatttaatcatttaaaattttgtccctctccccacttaatcactgccatgtcaataatt 2289  T

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Target: scaffold0181 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 147 - 175
Target Start/End: Original strand, 9325 - 9353
Alignment:
Q  147 ccacttaatcactgtcacgtcactaatta 175  Q
    |||||||||||||||||||||||||||||    
T  9325 ccacttaatcactgtcacgtcactaatta 9353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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