View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18380_low_23 (Length: 354)
Name: NF18380_low_23
Description: NF18380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18380_low_23 |
 |  |
|
| [»] scaffold0007 (1 HSPs) |
 |  |  |
|
| [»] scaffold0152 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr7 (Bit Score: 318; Significance: 1e-179; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 19 - 340
Target Start/End: Complemental strand, 30068379 - 30068058
Alignment:
| Q |
19 |
gtctggttcatcattacaaattgcgaaagacttccttatacaccacatttgatgtagtgctcatacaattgccatcttcatccgtgcataatatcttcaa |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30068379 |
gtctggttcatcattacaaattgcgaaagacttccttatacaccacatttgatgtagtgctcatacaattgccatcttcatccgtgcataatatcttcaa |
30068280 |
T |
 |
| Q |
119 |
tccgtttcttgatgtaactcttgacaccgcaacatatagttgtccgtgggaaaaaaccggttgaggaatgtatactccaacttctttcaatgattgccct |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
30068279 |
tccgtttcttgatgtaactcttgacaccgcaacatatagttgtccgtgggaaaaaaccggttgaggaaggtatactccaacttctttcaatgattgccct |
30068180 |
T |
 |
| Q |
219 |
tgacttttgttgatcgtcattgcaaatgacaccgatatagggaactgtcgacgctgaaacttgaatggaattcttgtatccgatggactcaacgacaatc |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30068179 |
tgacttttgttgatcgtcattgcaaatgacaccgatatagggaactgtcgacgctgaaacttgaatggaattcttgtatccgatggactcaacgacaatc |
30068080 |
T |
 |
| Q |
319 |
tcggtatataaactatatctcc |
340 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
30068079 |
tcggtatataaactatatctcc |
30068058 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 19 - 340
Target Start/End: Complemental strand, 45138051 - 45137730
Alignment:
| Q |
19 |
gtctggttcatcattacaaattgcgaaagacttccttatacaccacatttgatgtagtgctcatacaattgccatcttcatccgtgcataatatcttcaa |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45138051 |
gtctggttcatcattacaaattgcgaaagacttccttatacaccacatttgatgtagtgctcatacaattgccatcttcatccgtgcataatatcttcaa |
45137952 |
T |
 |
| Q |
119 |
tccgtttcttgatgtaactcttgacaccgcaacatatagttgtccgtgggaaaaaaccggttgaggaatgtatactccaacttctttcaatgattgccct |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
45137951 |
tccgtttcttgatgtaactcttgacaccgcaacatatagttgtccgtgggaaaaaaccggttgaggaaggtatactccaacttctttcaatgattgccct |
45137852 |
T |
 |
| Q |
219 |
tgacttttgttgatcgtcattgcaaatgacaccgatatagggaactgtcgacgctgaaacttgaatggaattcttgtatccgatggactcaacgacaatc |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45137851 |
tgacttttgttgatcgtcattgcaaatgacaccgatatagggaactgtcgacgctgaaacttgaatggaattcttgtatccgatggactcaacgacaatc |
45137752 |
T |
 |
| Q |
319 |
tcggtatataaactatatctcc |
340 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
45137751 |
tcggtatataaactatatctcc |
45137730 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 58 - 337
Target Start/End: Original strand, 42000780 - 42001059
Alignment:
| Q |
58 |
acaccacatttgatgtagtgctcatacaattgccatcttcatccgtgcataatatcttcaatccgtttcttgatgtaactcttgacaccgcaacatatag |
157 |
Q |
| |
|
|||| ||||||||||||||||| || ||||||| |||||||| || ||| | |||||||| || |||||||| |||||||| ||||||||||||| |
|
|
| T |
42000780 |
acacgacatttgatgtagtgctgatgcaattgctgtcttcatctgttaatagcaatttcaatcctttccttgatgttactcttgagaccgcaacatataa |
42000879 |
T |
 |
| Q |
158 |
ttgtccgtgggaaaaaaccggttgaggaatgtatactccaacttctttcaatgattgcccttgacttttgttgatcgtcattgcaaatgacaccgatata |
257 |
Q |
| |
|
||| ||||| ||||| || ||||| ||| ||||| ||||||| || || || || ||||| || ||||| || ||||| || || || || || || |
|
|
| T |
42000880 |
ttggccgtgtgaaaacacaggttgcagaaggtatatcccaactttttgtaaagactgtccttggctcttgtttatagtcatagcgaacgaaactgaaatt |
42000979 |
T |
 |
| Q |
258 |
gggaactgtcgacgctgaaacttgaatggaattcttgtatccgatggactcaacgacaatctcggtatataaactatatc |
337 |
Q |
| |
|
||||| || || ||||||||||||||||| |||||||| || || |||| |||||||| || || || |||||||| |
|
|
| T |
42000980 |
gggaattgcttgcgttgaaacttgaatggaatccttgtatcagaaggtgtcaatgacaatctagggatgtatactatatc |
42001059 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 45823742 - 45823701
Alignment:
| Q |
209 |
tgattgcccttgacttttgttgatcgtcattgcaaatgacac |
250 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
45823742 |
tgattgcccttgacttttgttgatagtcattgcaaatgacac |
45823701 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 209 - 325
Target Start/End: Complemental strand, 14231918 - 14231802
Alignment:
| Q |
209 |
tgattgcccttgacttttgttgatcgtcattgcaaatgacaccgatatagggaactgtcgacgctgaaacttgaatggaattcttgtatccgatggactc |
308 |
Q |
| |
|
|||||| || ||||||||||| || ||||||||||| ||| | |||||| ||||||| || ||||| ||||| |||||||| ||||| ||||| || |
|
|
| T |
14231918 |
tgattgtccctgacttttgtttatagtcattgcaaaacacaaagctataggaaactgtctgcgttgaaatttgaaaggaattctggtatcagatggtgtc |
14231819 |
T |
 |
| Q |
309 |
aacgacaatctcggtat |
325 |
Q |
| |
|
|| |||||||||||||| |
|
|
| T |
14231818 |
aatgacaatctcggtat |
14231802 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 178 - 298
Target Start/End: Complemental strand, 34577294 - 34577174
Alignment:
| Q |
178 |
gttgaggaatgtatactccaacttctttcaatgattgcccttgacttttgttgatcgtcattgcaaatgacaccgatatagggaactgtcgacgctgaaa |
277 |
Q |
| |
|
||||||||| ||| || |||||||||| |||||||| |||||||| |||||||| ||||||||||| | || |||||||| ||||| | ||| || || |
|
|
| T |
34577294 |
gttgaggaaggtagacatcaacttcttttaatgattgtccttgactcttgttgattgtcattgcaaaataaacagatataggaaactgcctacgttggaa |
34577195 |
T |
 |
| Q |
278 |
cttgaatggaattcttgtatc |
298 |
Q |
| |
|
||||| || ||||| ||||| |
|
|
| T |
34577194 |
tttgaacggtattctagtatc |
34577174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 325
Target Start/End: Original strand, 26906848 - 26906964
Alignment:
| Q |
209 |
tgattgcccttgacttttgttgatcgtcattgcaaatgacaccgatatagggaactgtcgacgctgaaacttgaatggaattcttgtatccgatggactc |
308 |
Q |
| |
|
|||||| || |||||||| || || ||||||||||| ||| | |||||| ||||||| || ||||| ||||| |||||||| ||||| ||||| || |
|
|
| T |
26906848 |
tgattgtccctgacttttatttatagtcattgcaaaacacaaagctataggaaactgtctgcgttgaaatttgaaaggaattctggtatcagatggtgtc |
26906947 |
T |
 |
| Q |
309 |
aacgacaatctcggtat |
325 |
Q |
| |
|
|| |||||||||||||| |
|
|
| T |
26906948 |
aatgacaatctcggtat |
26906964 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 301
Target Start/End: Complemental strand, 44117880 - 44117774
Alignment:
| Q |
195 |
ccaacttctttcaatgattgcccttgacttttgttgatcgtcattgcaaatgacaccgatatagggaactgtcgacgctgaaacttgaatggaattcttg |
294 |
Q |
| |
|
||||||| ||| |||||||||||||| |||||||| || ||||||||||| | || | ||||| ||||||| || || |||||||| ||||| |||| |
|
|
| T |
44117880 |
ccaacttattttaatgattgcccttggcttttgttaatggtcattgcaaaacaaacggtaataggaaactgtctccgttggaacttgaagggaatccttg |
44117781 |
T |
 |
| Q |
295 |
tatccga |
301 |
Q |
| |
|
| ||||| |
|
|
| T |
44117780 |
tgtccga |
44117774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 337
Target Start/End: Complemental strand, 9030602 - 9030538
Alignment:
| Q |
273 |
tgaaacttgaatggaattcttgtatccgatggactcaacgacaatctcggtatataaactatatc |
337 |
Q |
| |
|
||||||||||||||||| |||||||| | ||| | ||||||||||| |||||||| ||| |||| |
|
|
| T |
9030602 |
tgaaacttgaatggaatccttgtatcataaggagttaacgacaatctaggtatatagactgtatc |
9030538 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 48844486 - 48844530
Alignment:
| Q |
203 |
tttcaatgattgcccttgacttttgttgatcgtcattgcaaatga |
247 |
Q |
| |
|
||||| ||||||| |||||||||||||||| ||||| |||||||| |
|
|
| T |
48844486 |
tttcagtgattgctcttgacttttgttgatagtcatcgcaaatga |
48844530 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 302; Significance: 1e-170; HSPs: 14)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 19 - 340
Target Start/End: Original strand, 18986232 - 18986553
Alignment:
| Q |
19 |
gtctggttcatcattacaaattgcgaaagacttccttatacaccacatttgatgtagtgctcatacaattgccatcttcatccgtgcataatatcttcaa |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
18986232 |
gtctggttcatcattacaaattgcgaaagacttccttatacaccacatttgatgtagtgctcatacaattgccatcttcatctgtgcataatatcttcaa |
18986331 |
T |
 |
| Q |
119 |
tccgtttcttgatgtaactcttgacaccgcaacatatagttgtccgtgggaaaaaaccggttgaggaatgtatactccaacttctttcaatgattgccct |
218 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
18986332 |
tccttttcttgatgtaactcttgacaccgcaacatatagttgtccgtgggaaaaaaccggttgaggaaggtatactccaacttctttcaatgattgccct |
18986431 |
T |
 |
| Q |
219 |
tgacttttgttgatcgtcattgcaaatgacaccgatatagggaactgtcgacgctgaaacttgaatggaattcttgtatccgatggactcaacgacaatc |
318 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18986432 |
tgacttttgttgatcgtcattgcaaatgaaaccgatatagggaactgtcgacgctgaaacttaaatggaattcttgtatccgatggactcaacgacaatc |
18986531 |
T |
 |
| Q |
319 |
tcggtatataaactatatctcc |
340 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
18986532 |
tcggtatataaactatatctcc |
18986553 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 41 - 340
Target Start/End: Complemental strand, 52382101 - 52381802
Alignment:
| Q |
41 |
gcgaaagacttccttatacaccacatttgatgtagtgctcatacaattgccatcttcatccgtgcataatatcttcaatccgtttcttgatgtaactctt |
140 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
52382101 |
gcgaaagacttccttatacaccacatttgatgtagtgctcatacaattgccatcttcaaccgtcaataatatcttcaatccgtttcttgatgtaactctt |
52382002 |
T |
 |
| Q |
141 |
gacaccgcaacatatagttgtccgtgggaaaaaaccggttgaggaatgtatactccaacttctttcaatgattgcccttgacttttgttgatcgtcattg |
240 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
52382001 |
gacaccgcaacatacagttgtccgtgggaaaaaaccggttgaggaaggtatactccaacttgtttcaatgattgccattgacttttgttgatcgtcattg |
52381902 |
T |
 |
| Q |
241 |
caaatgacaccgatatagggaactgtcgacgctgaaacttgaatggaattcttgtatccgatggactcaacgacaatctcggtatataaactatatctcc |
340 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52381901 |
caaatgacgccgatatagggaactgtcgacactgaaacttgaatggaattcttgtatccgatggactcaacgacaatctcggtatataaactatatctcc |
52381802 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 34 - 325
Target Start/End: Complemental strand, 29133574 - 29133283
Alignment:
| Q |
34 |
acaaattgcgaaagacttccttatacaccacatttgatgtagtgctcatacaattgccatcttcatccgtgcataatatcttcaatccgtttcttgatgt |
133 |
Q |
| |
|
|||||||||| || ||||| | ||| || ||||||||||||||| | ||||| ||| |||||||| | |||| | |||||||||||||| || || |
|
|
| T |
29133574 |
acaaattgcggaacacttcatgatatacgacatttgatgtagtgttgatacagttgttgtcttcatctatcaataaaagtttcaatccgtttctggaagt |
29133475 |
T |
 |
| Q |
134 |
aactcttgacaccgcaacatatagttgtccgtgggaaaaaaccggttgaggaatgtatactccaacttctttcaatgattgcccttgacttttgttgatc |
233 |
Q |
| |
|
|||||||| ||||||||||||||||| |||| || || | ||||||||||| ||||| ||||| | || || || || || || ||||| || || |
|
|
| T |
29133474 |
tactcttgaaaccgcaacatatagttgatcgtgtgagaagatcggttgaggaaggtatatcccaaccttttgcagcgactgtccctggcttttatttatt |
29133375 |
T |
 |
| Q |
234 |
gtcattgcaaatgacaccgatatagggaactgtcgacgctgaaacttgaatggaattcttgtatccgatggactcaacgacaatctcggtat |
325 |
Q |
| |
|
||||||||||| || || || || |||||||| |||| |||||||||||||||||||||||||| || ||| ||||||||||||| ||||| |
|
|
| T |
29133374 |
gtcattgcaaacgatacggaaattgggaactgctgacgttgaaacttgaatggaattcttgtatcggaaggagtcaacgacaatctaggtat |
29133283 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 34 - 325
Target Start/End: Complemental strand, 53545552 - 53545261
Alignment:
| Q |
34 |
acaaattgcgaaagacttccttatacaccacatttgatgtagtgctcatacaattgccatcttcatccgtgcataatatcttcaatccgtttcttgatgt |
133 |
Q |
| |
|
|||||||||| || ||||| | ||| || ||||||||||||||| | ||||| ||| |||||||| | |||| | ||||||||||| || || || |
|
|
| T |
53545552 |
acaaattgcggaacacttcatgatatacgacatttgatgtagtgttgatacagttgttgtcttcatctatcaataaaagtttcaatccgttcctggaagt |
53545453 |
T |
 |
| Q |
134 |
aactcttgacaccgcaacatatagttgtccgtgggaaaaaaccggttgaggaatgtatactccaacttctttcaatgattgcccttgacttttgttgatc |
233 |
Q |
| |
|
|||||||| ||||||||||||||||| |||| || || || |||||||||| ||||| ||||| | || | || || || || ||||| || || |
|
|
| T |
53545452 |
tactcttgaaaccgcaacatatagttgaccgtatgagaagactggttgaggaaggtatatcccaaccttttgtagcgactgtccctggcttttatttatt |
53545353 |
T |
 |
| Q |
234 |
gtcattgcaaatgacaccgatatagggaactgtcgacgctgaaacttgaatggaattcttgtatccgatggactcaacgacaatctcggtat |
325 |
Q |
| |
|
|| |||||||| || || || || |||||||| ||||| |||||||||||||||||||||||||| || ||| ||||||||||||| ||||| |
|
|
| T |
53545352 |
gttattgcaaacgatacggaaattgggaactgccgacgttgaaacttgaatggaattcttgtatcagaaggagtcaacgacaatctaggtat |
53545261 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 265
Target Start/End: Original strand, 20370777 - 20370895
Alignment:
| Q |
147 |
gcaacatatagttgtccgtgggaaaaaaccggttgaggaatgtatactccaacttctttcaatgattgcccttgacttttgttgatcgtcattgcaaatg |
246 |
Q |
| |
|
|||||||| ||||| || || || || || |||||||||| ||| || ||||||||||||||||||| |||||||| |||||||| ||||||||||| |
|
|
| T |
20370777 |
gcaacataaagttgaccatgagagaacacgggttgaggaaggtagacagcaacttctttcaatgattgtccttgactcttgttgattgtcattgcaaaac |
20370876 |
T |
 |
| Q |
247 |
acaccgatatagggaactg |
265 |
Q |
| |
|
| || |||||||| ||||| |
|
|
| T |
20370877 |
aaacagatataggaaactg |
20370895 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 298
Target Start/End: Complemental strand, 925665 - 925576
Alignment:
| Q |
209 |
tgattgcccttgacttttgttgatcgtcattgcaaatgacaccgatatagggaactgtcgacgctgaaacttgaatggaattcttgtatc |
298 |
Q |
| |
|
||||||||| |||||||||||||| ||||||||||| | | |||||||||||||| ||||| ||||| || || |||||||||||||| |
|
|
| T |
925665 |
tgattgcccctgacttttgttgatggtcattgcaaaacaaatagatatagggaactgacgacgttgaaatttaaaaggaattcttgtatc |
925576 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 44703191 - 44703276
Alignment:
| Q |
213 |
tgcccttgacttttgttgatcgtcattgcaaatgacaccgatatagggaactgtcgacgctgaaacttgaatggaattcttgtatc |
298 |
Q |
| |
|
||||| |||||||||||||| ||||||||||| | || ||||||||||| |||||||| ||||| || || |||||||||||||| |
|
|
| T |
44703191 |
tgcccctgacttttgttgatggtcattgcaaaacaaacagatatagggaattgtcgacgttgaaatttaaaaggaattcttgtatc |
44703276 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 209 - 325
Target Start/End: Complemental strand, 37984791 - 37984675
Alignment:
| Q |
209 |
tgattgcccttgacttttgttgatcgtcattgcaaatgacaccgatatagggaactgtcgacgctgaaacttgaatggaattcttgtatccgatggactc |
308 |
Q |
| |
|
|||||| || ||||||||||| || ||||||||||| ||| | |||||| ||||||| || ||||| ||||| |||||||| ||||| ||||| || |
|
|
| T |
37984791 |
tgattgtccctgacttttgtttatagtcattgcaaaacacaaagctataggaaactgtctgcgttgaaatttgaaaggaattctggtatcagatggtgtc |
37984692 |
T |
 |
| Q |
309 |
aacgacaatctcggtat |
325 |
Q |
| |
|
|| |||||||||||||| |
|
|
| T |
37984691 |
aatgacaatctcggtat |
37984675 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 325
Target Start/End: Original strand, 24759079 - 24759185
Alignment:
| Q |
219 |
tgacttttgttgatcgtcattgcaaatgacaccgatatagggaactgtcgacgctgaaacttgaatggaattcttgtatccgatggactcaacgacaatc |
318 |
Q |
| |
|
||||||||||| || ||||||||||| ||| |||||| | ||||| | ||| ||||| ||||| |||||||| ||||| ||||| |||| ||||||| |
|
|
| T |
24759079 |
tgacttttgtttatagtcattgcaaaacacaaagatataagaaactgcctacgttgaaatttgaaaggaattctggtatcagatggtgtcaatgacaatc |
24759178 |
T |
 |
| Q |
319 |
tcggtat |
325 |
Q |
| |
|
||||||| |
|
|
| T |
24759179 |
tcggtat |
24759185 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 325
Target Start/End: Complemental strand, 24826935 - 24826829
Alignment:
| Q |
219 |
tgacttttgttgatcgtcattgcaaatgacaccgatatagggaactgtcgacgctgaaacttgaatggaattcttgtatccgatggactcaacgacaatc |
318 |
Q |
| |
|
||||||||||| || ||||||||||| ||| |||||| | ||||| | ||| ||||| ||||| |||||||| ||||| ||||| |||| ||||||| |
|
|
| T |
24826935 |
tgacttttgtttatagtcattgcaaaacacaaagatataagaaactgcctacgttgaaatttgaaaggaattctggtatcagatggtgtcaatgacaatc |
24826836 |
T |
 |
| Q |
319 |
tcggtat |
325 |
Q |
| |
|
||||||| |
|
|
| T |
24826835 |
tcggtat |
24826829 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 325
Target Start/End: Original strand, 33648438 - 33648544
Alignment:
| Q |
219 |
tgacttttgttgatcgtcattgcaaatgacaccgatatagggaactgtcgacgctgaaacttgaatggaattcttgtatccgatggactcaacgacaatc |
318 |
Q |
| |
|
||||||||||| || ||||||||||| ||| |||||||| ||||| | ||| ||||| ||||| |||||| | ||||| ||||| |||| ||||||| |
|
|
| T |
33648438 |
tgacttttgtttatagtcattgcaaaacacaaagatataggaaactgactacgttgaaatttgaaaggaattatggtatcagatggtgtcaatgacaatc |
33648537 |
T |
 |
| Q |
319 |
tcggtat |
325 |
Q |
| |
|
|| |||| |
|
|
| T |
33648538 |
tcagtat |
33648544 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 12813319 - 12813360
Alignment:
| Q |
209 |
tgattgcccttgacttttgttgatcgtcattgcaaatgacac |
250 |
Q |
| |
|
||||||| |||||||||||||||| || |||||||||||||| |
|
|
| T |
12813319 |
tgattgctcttgacttttgttgatagtaattgcaaatgacac |
12813360 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 174
Target Start/End: Complemental strand, 21799974 - 21799890
Alignment:
| Q |
90 |
ccatcttcatccgtgcataatatcttcaatccgtttcttgatgtaactcttgacaccgcaacatatagttgtccgtgggaaaaaa |
174 |
Q |
| |
|
||||||||||| ||| ||||||||||| || | ||| ||||||||||| || || |||||||| | ||||||||| ||||||| |
|
|
| T |
21799974 |
ccatcttcatcggtgatcaatatcttcaaaccttctctagatgtaactctcgaaacagcaacatacaattgtccgtgagaaaaaa |
21799890 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 325
Target Start/End: Original strand, 53024974 - 53025090
Alignment:
| Q |
209 |
tgattgcccttgacttttgttgatcgtcattgcaaatgacaccgatatagggaactgtcgacgctgaaacttgaatggaattcttgtatccgatggactc |
308 |
Q |
| |
|
|||||| || ||||||||||| || ||||||| ||| ||| |||||||| || |||| || ||||| ||||| |||||||| |||| ||||| || |
|
|
| T |
53024974 |
tgattgtccctgacttttgtttatagtcattgtaaaacacaaagatataggaaattgtctgcgttgaaatttgaaaggaattctgctatcagatggtgtc |
53025073 |
T |
 |
| Q |
309 |
aacgacaatctcggtat |
325 |
Q |
| |
|
|| |||||||||||||| |
|
|
| T |
53025074 |
aatgacaatctcggtat |
53025090 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0007 (Bit Score: 99; Significance: 8e-49; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 22 - 192
Target Start/End: Original strand, 78937 - 79107
Alignment:
| Q |
22 |
tggttcatcattacaaattgcgaaagacttccttatacaccacatttgatgtagtgctcatacaattgccatcttcatccgtgcataatatcttcaatcc |
121 |
Q |
| |
|
|||| ||||||||||||||||| |||||||| ||| |||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||| | |
|
|
| T |
78937 |
tggtgcatcattacaaattgcggaagacttctttaaacaccaaatttgatgtagtgctcatgcaattgccatcttcatccgtcaataatatcttcaattc |
79036 |
T |
 |
| Q |
122 |
gtttcttgatgtaactcttgacaccgcaacatatagttgtccgtgggaaaaaaccggttgaggaatgtata |
192 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| ||||| || ||||||| | |||||||||| ||||| |
|
|
| T |
79037 |
gtttcttgatgtaacccttgacaccgcaacatacagttggttgtcggaaaaacctggttgaggaaggtata |
79107 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 64; Significance: 6e-28; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 58 - 337
Target Start/End: Complemental strand, 11236764 - 11236485
Alignment:
| Q |
58 |
acaccacatttgatgtagtgctcatacaattgccatcttcatccgtgcataatatcttcaatccgtttcttgatgtaactcttgacaccgcaacatatag |
157 |
Q |
| |
|
|||| ||||||||||||||||| |||||||||| |||||||| || ||| | |||||||| || |||||||| |||||||| ||||||||||||| |
|
|
| T |
11236764 |
acacaacatttgatgtagtgctgatacaattgctgtcttcatctgtcaatagcaatttcaatcctttccttgatgttactcttgagaccgcaacatataa |
11236665 |
T |
 |
| Q |
158 |
ttgtccgtgggaaaaaaccggttgaggaatgtatactccaacttctttcaatgattgcccttgacttttgttgatcgtcattgcaaatgacaccgatata |
257 |
Q |
| |
|
||| ||||| ||||| || |||||||||| ||||| ||||||| || || ||||| ||||| || ||||| || ||||| || || || || || || |
|
|
| T |
11236664 |
ttggccgtgtgaaaacacaggttgaggaaggtatatcccaactttttgtaaagattgtccttggctcttgtttatagtcatagcgaacgaaactgaaatt |
11236565 |
T |
 |
| Q |
258 |
gggaactgtcgacgctgaaacttgaatggaattcttgtatccgatggactcaacgacaatctcggtatataaactatatc |
337 |
Q |
| |
|
||||| ||| || ||||||||||||||||| |||||||| || || |||| |||||||| || || || |||||||| |
|
|
| T |
11236564 |
gggaattgtttgcgttgaaacttgaatggaatccttgtatcagaaggtgtcaatgacaatctagggatgtatactatatc |
11236485 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 213 - 298
Target Start/End: Complemental strand, 5454149 - 5454064
Alignment:
| Q |
213 |
tgcccttgacttttgttgatcgtcattgcaaatgacaccgatatagggaactgtcgacgctgaaacttgaatggaattcttgtatc |
298 |
Q |
| |
|
||||| |||||||||||||| ||||||||||| | || ||||||||||||||||| || ||||| || || |||||||||||||| |
|
|
| T |
5454149 |
tgcccctgacttttgttgatggtcattgcaaaacaaacagatatagggaactgtcggcgttgaaatttaaaaggaattcttgtatc |
5454064 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 38642868 - 38642808
Alignment:
| Q |
124 |
ttcttgatgtaactcttgacaccgcaacatatagttgtccgtgggaaaaaaccggttgagg |
184 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| || || |||||||| | |||||| |
|
|
| T |
38642868 |
ttcttgatgtaactcttgacaatgcaacatatagttgcccatgagaaaaaactgtttgagg |
38642808 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0152 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0152
Description:
Target: scaffold0152; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 294
Target Start/End: Complemental strand, 13262 - 13146
Alignment:
| Q |
178 |
gttgaggaatgtatactccaacttctttcaatgattgcccttgacttttgttgatcgtcattgcaaatgacaccgatatagggaactgtcgacgctgaaa |
277 |
Q |
| |
|
||||||||| |||| ||| |||| ||||||||| || |||||| |||||||||| ||||||||||| ||||| |||||||||| |||| || ||||| |
|
|
| T |
13262 |
gttgaggaagatatattcctacttgtttcaatgactggccttgaattttgttgattgtcattgcaaaggacacatatatagggaattgtcagcgttgaaa |
13163 |
T |
 |
| Q |
278 |
cttgaatggaattcttg |
294 |
Q |
| |
|
|||||| ||||| |||| |
|
|
| T |
13162 |
cttgaaaggaatccttg |
13146 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 247
Target Start/End: Original strand, 21667597 - 21667736
Alignment:
| Q |
108 |
aatatcttcaatccgtttcttgatgtaactcttgacaccgcaacatatagttgtccgtgggaaaaaaccggttgaggaatgtatactccaacttctttca |
207 |
Q |
| |
|
|||||||| || || |||||||| |||||||| |||| |||||||| || || || ||||||||||| |||||||| | ||| |||||||| | |||| |
|
|
| T |
21667597 |
aatatctttaacccttttcttgacgtaactctagacaatgcaacatacagctggccatgggaaaaaacgggttgaggcaagtaaactccaacatgcttca |
21667696 |
T |
 |
| Q |
208 |
atgattgcccttgacttttgttgatcgtcattgcaaatga |
247 |
Q |
| |
|
||| || ||||| ||||| ||||| ||||| |||||||| |
|
|
| T |
21667697 |
gtgactgaccttggcttttattgatagtcatagcaaatga |
21667736 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 39072524 - 39072625
Alignment:
| Q |
29 |
tcattacaaattgcgaaagacttccttatacaccacatttgatgtagtgctcatacaattgccatcttcatccgtgcataatatcttcaatccgtttctt |
128 |
Q |
| |
|
||||||||||||||| || || || || || | |||||||||||||| ||||||||| |||||||||||| || ||| || ||||||||||||||| |
|
|
| T |
39072524 |
tcattacaaattgcggaatacctctttgtaaatgacatttgatgtagtattcatacaatggccatcttcatctgtcaatagaattttcaatccgtttctt |
39072623 |
T |
 |
| Q |
129 |
ga |
130 |
Q |
| |
|
|| |
|
|
| T |
39072624 |
ga |
39072625 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 247
Target Start/End: Complemental strand, 38685415 - 38685381
Alignment:
| Q |
213 |
tgcccttgacttttgttgatcgtcattgcaaatga |
247 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| |
|
|
| T |
38685415 |
tgcccttgacttttgttgattgtcattgcaaatga |
38685381 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 174
Target Start/End: Original strand, 40170578 - 40170704
Alignment:
| Q |
48 |
acttccttatacaccacatttgatgtagtgctcatacaattgccatcttcatccgtgcataatatcttcaatccgtttcttgatgtaactcttgacaccg |
147 |
Q |
| |
|
||||| |||||||| |||||||||||||| ||||||| || |||||||||| | ||| || |||||||| |||||||| |||||||| || |||| |
|
|
| T |
40170578 |
acttctttatacacaacatttgatgtagtattcatacagttaccatcttcatgtgccaatagaattttcaatccttttcttgaggtaactctagaaaccg |
40170677 |
T |
 |
| Q |
148 |
caacatatagttgtccgtgggaaaaaa |
174 |
Q |
| |
|
||||||| |||| ||| | |||||||| |
|
|
| T |
40170678 |
caacataaagttttccattggaaaaaa |
40170704 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 54 - 174
Target Start/End: Complemental strand, 23823043 - 23822923
Alignment:
| Q |
54 |
ttatacaccacatttgatgtagtgctcatacaattgccatcttcatccgtgcataatatcttcaatccgtttcttgatgtaactcttgacaccgcaacat |
153 |
Q |
| |
|
|||||||| |||||||||||||| ||||||| || |||||||||| | ||| || |||||||| |||||||| |||||||| || |||||||||| |
|
|
| T |
23823043 |
ttatacacaacatttgatgtagtattcatacagttaccatcttcatgtgccaatagaattttcaatccttttcttgaggtaactctagaaaccgcaacat |
23822944 |
T |
 |
| Q |
154 |
atagttgtccgtgggaaaaaa |
174 |
Q |
| |
|
| |||| ||| | |||||||| |
|
|
| T |
23822943 |
aaagttttccattggaaaaaa |
23822923 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 328
Target Start/End: Complemental strand, 35351239 - 35351121
Alignment:
| Q |
210 |
gattgcccttgacttttgttgatcgtcattgcaaatgacaccgatatagggaactgtcgacgctgaaacttgaatggaattcttgtatccgatggactca |
309 |
Q |
| |
|
||||||||||| ||||||| || ||||||||||| | || ||||||| ||||| ||||||||| ||||| |||||||||||||| || || ||| |
|
|
| T |
35351239 |
gattgcccttggcttttgtgtatggtcattgcaaagcatacaaatataggaaactgcttacgctgaaatttgaaaggaattcttgtatcagacggcgtca |
35351140 |
T |
 |
| Q |
310 |
acgacaatctcggtatata |
328 |
Q |
| |
|
||| ||||| |||||||| |
|
|
| T |
35351139 |
tcgataatcttggtatata |
35351121 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 160
Target Start/End: Original strand, 33686217 - 33686305
Alignment:
| Q |
72 |
gtagtgctcatacaattgccatcttcatccgtgcataatatcttcaatccgtttcttgatgtaactcttgacaccgcaacatatagttg |
160 |
Q |
| |
|
|||||| | ||||||| ||||| |||||||| ||||||||||||| || | |||||||||||| | ||| | |||||||||||||| |
|
|
| T |
33686217 |
gtagtgttgatacaatccccatcgtcatccgttaataatatcttcaaaccatctcttgatgtaacacgtgatattgcaacatatagttg |
33686305 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 238
Target Start/End: Complemental strand, 43382646 - 43382534
Alignment:
| Q |
126 |
cttgatgtaactcttgacaccgcaacatatagttgtccgtgggaaaaaaccggttgaggaatgtatactccaacttctttcaatgattgcccttgacttt |
225 |
Q |
| |
|
|||||||||||||| || | |||||||| | ||| ||||| || || || |||||||| | ||| || ||||||| ||| | |||||| |||||||| | |
|
|
| T |
43382646 |
cttgatgtaactctggatattgcaacataaacttgaccgtgagagaatacgggttgaggtacgtacacaccaacttttttgagtgattgtccttgactct |
43382547 |
T |
 |
| Q |
226 |
tgttgatcgtcat |
238 |
Q |
| |
|
||||||| ||||| |
|
|
| T |
43382546 |
tgttgattgtcat |
43382534 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 173
Target Start/End: Complemental strand, 16685201 - 16685136
Alignment:
| Q |
108 |
aatatcttcaatccgtttcttgatgtaactcttgacaccgcaacatatagttgtccgtgggaaaaa |
173 |
Q |
| |
|
||||||||||| || |||||||||||||||||||||| |||||||||||||| || || |||||| |
|
|
| T |
16685201 |
aatatcttcaagccatttcttgatgtaactcttgacaatgcaacatatagttgcccatgagaaaaa |
16685136 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 325
Target Start/End: Original strand, 30442819 - 30443092
Alignment:
| Q |
51 |
tccttatacaccacatttgatgtagtgctcatacaattgccatcttcatccgtgcataatatcttcaatccgtttcttgatgtaactcttgacaccgcaa |
150 |
Q |
| |
|
|||||||| || |||||||| || || || ||||||| |||| |||||||| |||||||||||| || | ||||||||||| | ||| | |||| |
|
|
| T |
30442819 |
tccttataaactacatttgaagtggtccttatacaatccccattgtcatccgttaataatatcttcagaccatcccttgatgtaacacgtgatattgcaa |
30442918 |
T |
 |
| Q |
151 |
catatagttgtccgtgggaaaaaaccggttgaggaatgtatactccaacttctttcaatgattgcccttgacttttgttgatcgtcattgcaaatgacac |
250 |
Q |
| |
|
||||||| || || || || || |||||||| |||| || | ||||||| || | |||||| || ||||||||||| || ||||||||||| ||| |
|
|
| T |
30442919 |
catatagctgcccatgtgagaagaccggttgtggaagatagatgccaacttacttaagtgattgtccctgacttttgtttatagtcattgcaaaacacaa |
30443018 |
T |
 |
| Q |
251 |
cgatatagggaactgtcgacgctgaaacttgaatggaattcttgtatccgatggactcaacgacaatctcggtat |
325 |
Q |
| |
|
| |||||| |||||| || ||||| ||||| |||||||| ||||| ||||| |||| |||||||||||||| |
|
|
| T |
30443019 |
agctataggaaactgtatgcgttgaaatttgaaaggaattctggtatcagatgg-ttcaatgacaatctcggtat |
30443092 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 43026684 - 43026769
Alignment:
| Q |
213 |
tgcccttgacttttgttgatcgtcattgcaaatgacaccgatatagggaactgtcgacgctgaaacttgaatggaattcttgtatc |
298 |
Q |
| |
|
||||| ||||||||||| || |||||||||| | || ||||||||||||||||||| ||||| || || |||||||||||||| |
|
|
| T |
43026684 |
tgcccctgacttttgttaatgttcattgcaaaacaaacaaatatagggaactgtcgacgttgaaatttaaaaggaattcttgtatc |
43026769 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 298
Target Start/End: Complemental strand, 2736760 - 2736609
Alignment:
| Q |
147 |
gcaacatatagttgtccgtgggaaaaaaccggttgaggaatgtatactccaacttctttcaatgattgcccttgacttttgttgatcgtcattgcaaatg |
246 |
Q |
| |
|
|||||||| ||||| || || || || || || ||||||| ||| || ||||||||||||| ||||| |||||||| |||||||| ||||||||||| |
|
|
| T |
2736760 |
gcaacataaagttgaccatgagagaacacgggctgaggaaggtacacagcaacttctttcaacgattgtccttgactcttgttgattgtcattgcaaaac |
2736661 |
T |
 |
| Q |
247 |
acaccgatatagggaactgtcgacgctgaaacttgaatggaattcttgtatc |
298 |
Q |
| |
|
| || |||||||| ||||| | ||| || || ||||| || ||||| ||||| |
|
|
| T |
2736660 |
aaacagatataggaaactgcctacgttggaatttgaacggtattctagtatc |
2736609 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 325
Target Start/End: Original strand, 31891563 - 31891679
Alignment:
| Q |
209 |
tgattgcccttgacttttgttgatcgtcattgcaaatgacaccgatatagggaactgtcgacgctgaaacttgaatggaattcttgtatccgatggactc |
308 |
Q |
| |
|
|||||| || ||||||||||| || ||||||||||| ||| | |||||| |||||| || ||||| ||||| |||||||| ||||| ||||| || |
|
|
| T |
31891563 |
tgattgtccctgacttttgtttatagtcattgcaaaacacaaagctataggaaactgtatgcggtgaaatttgaaaggaattctagtatcagatggtgtc |
31891662 |
T |
 |
| Q |
309 |
aacgacaatctcggtat |
325 |
Q |
| |
|
|| |||||||||||||| |
|
|
| T |
31891663 |
aatgacaatctcggtat |
31891679 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 328
Target Start/End: Original strand, 22390028 - 22390174
Alignment:
| Q |
182 |
aggaatgtatactccaacttctttcaatgattgcccttgacttttgttgatcgtcattgcaaatgacaccgatatagggaactgtcgacgctgaaacttg |
281 |
Q |
| |
|
||||| ||||| ||||||| ||| | ||| || ||||||||||| || || ||||| ||||| || || |||||| |||||||||||| ||||| || |
|
|
| T |
22390028 |
aggaaggtatatgccaacttattttagtgactgtccttgacttttattaatggtcatcgcaaaagatacaaatatagcgaactgtcgacgttgaaattta |
22390127 |
T |
 |
| Q |
282 |
aatggaattcttgtatccgatggactcaacgacaatctcggtatata |
328 |
Q |
| |
|
|| | |||||| |||| || |||||||| || ||||| |||||||| |
|
|
| T |
22390128 |
aaagaaattctcgtattagaaggactcaatgataatctaggtatata |
22390174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 298
Target Start/End: Complemental strand, 25169572 - 25169483
Alignment:
| Q |
209 |
tgattgcccttgacttttgttgatcgtcattgcaaatgacaccgatatagggaactgtcgacgctgaaacttgaatggaattcttgtatc |
298 |
Q |
| |
|
|||||||||||| |||||||| || ||||||||||| | || |||||| |||||| ||||| ||| ||||| |||||||||||||| |
|
|
| T |
25169572 |
tgattgcccttggcttttgtttattgtcattgcaaagcagacaaatatagaaaactgtttacgctaaaatttgaaaggaattcttgtatc |
25169483 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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