View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18380_low_29 (Length: 320)
Name: NF18380_low_29
Description: NF18380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18380_low_29 |
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Alignment Details
Target: chr7 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 4 - 306
Target Start/End: Original strand, 27429096 - 27429406
Alignment:
| Q |
4 |
acatttatgctgaaaagatgatacctcatttcaatgtatcgactcaaataacactttcaaacatttacaacccaaaaag--------agatgctttattt |
95 |
Q |
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| T |
27429096 |
acatttatgctgaaaagatgatacctcatttcaatgtatcgactcaaataacactttcaaacattgacaacccaaaaagttaaatagagatgctttattt |
27429195 |
T |
|
| Q |
96 |
tctctctttatatataaaggtaagtaatcattattcatgaggatcaggagtgtgtggccattgtattttgaatgctgtaaataggatatatctcacaaca |
195 |
Q |
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| T |
27429196 |
tctctctttatatataaaggtaagtaatcattattcatgaggatcaggagtgtgtggccattgtattttgaatgctgtaaataggatatatctcacaaca |
27429295 |
T |
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| Q |
196 |
ttcacaaattaactatctccatcaactttttgcttattgcactaaaccccacattcccactcaccccaaaacaacaaaacctgaaaacctcaccacatta |
295 |
Q |
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| T |
27429296 |
ttcacaaattaactatctccatcaactttttgcttattggactaaaccccacattcccactcaccccaaaacaacaaaacctgaaaacctcaccacatta |
27429395 |
T |
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| Q |
296 |
atacagacacc |
306 |
Q |
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| T |
27429396 |
atacagacacc |
27429406 |
T |
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