View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18380_low_33 (Length: 305)

Name: NF18380_low_33
Description: NF18380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18380_low_33
NF18380_low_33
[»] chr1 (26 HSPs)
chr1 (1-215)||(5161979-5162193)
chr1 (216-299)||(43571103-43571186)
chr1 (214-299)||(5489774-5489859)
chr1 (213-299)||(48498979-48499065)
chr1 (214-299)||(44112675-44112760)
chr1 (216-299)||(38335918-38336001)
chr1 (216-299)||(48119628-48119711)
chr1 (216-299)||(35003294-35003377)
chr1 (216-299)||(37814778-37814861)
chr1 (218-299)||(4401329-4401411)
chr1 (214-292)||(24769523-24769601)
chr1 (215-299)||(41065152-41065236)
chr1 (216-296)||(50448280-50448360)
chr1 (215-298)||(750323-750406)
chr1 (214-299)||(45639749-45639834)
chr1 (215-299)||(38113212-38113296)
chr1 (215-299)||(45427762-45427846)
chr1 (214-297)||(26585460-26585543)
chr1 (216-299)||(46168383-46168466)
chr1 (218-299)||(2497579-2497660)
chr1 (218-299)||(7447828-7447908)
chr1 (214-273)||(14427345-14427404)
chr1 (214-299)||(23989540-23989626)
chr1 (215-299)||(45705824-45705908)
chr1 (216-275)||(51898601-51898660)
chr1 (216-249)||(4888055-4888088)
[»] chr3 (25 HSPs)
chr3 (216-299)||(42100688-42100771)
chr3 (214-299)||(46941051-46941136)
chr3 (214-299)||(40808863-40808948)
chr3 (214-299)||(54246165-54246250)
chr3 (215-299)||(25413680-25413764)
chr3 (217-299)||(54237097-54237179)
chr3 (214-299)||(24688419-24688504)
chr3 (214-299)||(47191043-47191127)
chr3 (216-299)||(45126945-45127028)
chr3 (217-299)||(42394436-42394518)
chr3 (214-299)||(53273701-53273786)
chr3 (214-299)||(9434122-9434207)
chr3 (218-299)||(27748565-27748646)
chr3 (212-299)||(10457909-10457996)
chr3 (216-299)||(36150130-36150213)
chr3 (217-299)||(40480750-40480832)
chr3 (218-299)||(1078229-1078309)
chr3 (216-299)||(34791829-34791912)
chr3 (214-299)||(4190282-4190367)
chr3 (218-299)||(53581875-53581956)
chr3 (215-299)||(25996267-25996351)
chr3 (216-299)||(51757593-51757676)
chr3 (213-299)||(52627994-52628080)
chr3 (214-299)||(29558251-29558336)
chr3 (214-283)||(11064755-11064822)
[»] scaffold0119 (1 HSPs)
scaffold0119 (214-299)||(683-768)
[»] chr6 (18 HSPs)
chr6 (214-299)||(26670026-26670111)
chr6 (214-299)||(7273352-7273437)
chr6 (215-299)||(9698350-9698434)
chr6 (214-299)||(26466797-26466882)
chr6 (214-299)||(7292745-7292830)
chr6 (214-299)||(7367547-7367632)
chr6 (218-299)||(24204004-24204085)
chr6 (216-299)||(13743238-13743321)
chr6 (216-299)||(13748738-13748821)
chr6 (216-299)||(30014343-30014426)
chr6 (214-299)||(3213398-3213483)
chr6 (218-299)||(30735984-30736065)
chr6 (214-299)||(33242401-33242486)
chr6 (215-299)||(21279928-21280012)
chr6 (215-299)||(21293694-21293778)
chr6 (215-283)||(31109255-31109323)
chr6 (216-299)||(33253913-33253996)
chr6 (218-299)||(27441544-27441625)
[»] chr8 (26 HSPs)
chr8 (218-299)||(42295197-42295278)
chr8 (214-299)||(36743500-36743585)
chr8 (216-299)||(11582766-11582849)
chr8 (216-299)||(29705362-29705445)
chr8 (215-299)||(2546995-2547079)
chr8 (214-296)||(30660762-30660844)
chr8 (217-299)||(45397317-45397399)
chr8 (214-299)||(5754901-5754986)
chr8 (218-299)||(30912579-30912660)
chr8 (218-299)||(33630010-33630091)
chr8 (214-299)||(35181514-35181599)
chr8 (218-299)||(42699259-42699340)
chr8 (215-299)||(42197452-42197536)
chr8 (216-298)||(2165981-2166063)
chr8 (218-299)||(29800967-29801048)
chr8 (214-299)||(34304786-34304871)
chr8 (218-299)||(20148762-20148843)
chr8 (218-299)||(26125637-26125718)
chr8 (215-299)||(18066735-18066819)
chr8 (215-299)||(16603643-16603727)
chr8 (215-299)||(31384663-31384747)
chr8 (216-299)||(1375542-1375625)
chr8 (216-253)||(28977146-28977183)
chr8 (217-299)||(16358850-16358933)
chr8 (216-275)||(37038602-37038661)
chr8 (214-251)||(19386635-19386672)
[»] chr7 (31 HSPs)
chr7 (215-299)||(35069720-35069804)
chr7 (216-299)||(24001029-24001112)
chr7 (216-299)||(42538448-42538531)
chr7 (214-299)||(5015393-5015478)
chr7 (216-299)||(5810941-5811024)
chr7 (216-299)||(42972852-42972935)
chr7 (214-299)||(40236917-40237002)
chr7 (215-299)||(9216301-9216384)
chr7 (215-299)||(43317442-43317526)
chr7 (218-299)||(43343641-43343722)
chr7 (218-299)||(44326180-44326261)
chr7 (218-299)||(44416951-44417032)
chr7 (215-299)||(5194248-5194332)
chr7 (216-299)||(31513287-31513370)
chr7 (216-299)||(45326020-45326103)
chr7 (218-299)||(4638216-4638297)
chr7 (218-299)||(10573751-10573832)
chr7 (219-296)||(26898422-26898499)
chr7 (225-296)||(32029837-32029908)
chr7 (217-299)||(31408650-31408732)
chr7 (215-299)||(24280613-24280697)
chr7 (239-299)||(38160596-38160656)
chr7 (214-299)||(41861672-41861759)
chr7 (232-299)||(27393277-27393344)
chr7 (214-299)||(33384868-33384954)
chr7 (218-299)||(16180374-16180454)
chr7 (216-283)||(39998408-39998475)
chr7 (215-249)||(38160661-38160695)
chr7 (214-299)||(27535248-27535333)
chr7 (214-275)||(35522999-35523060)
chr7 (215-268)||(47279745-47279798)
[»] chr4 (37 HSPs)
chr4 (212-299)||(33703137-33703224)
chr4 (214-299)||(1771283-1771368)
chr4 (214-299)||(25051691-25051776)
chr4 (214-298)||(28988471-28988555)
chr4 (216-299)||(35017733-35017815)
chr4 (216-298)||(27316731-27316813)
chr4 (217-299)||(41878407-41878489)
chr4 (218-299)||(43949818-43949900)
chr4 (214-299)||(27864562-27864647)
chr4 (214-299)||(28982839-28982924)
chr4 (214-299)||(55966363-55966448)
chr4 (216-296)||(27550309-27550389)
chr4 (212-299)||(711956-712043)
chr4 (218-299)||(39631102-39631184)
chr4 (218-299)||(3756263-3756344)
chr4 (214-299)||(23035978-23036063)
chr4 (218-299)||(43514703-43514784)
chr4 (216-296)||(12496956-12497036)
chr4 (215-299)||(32728356-32728440)
chr4 (215-299)||(48463467-48463551)
chr4 (216-299)||(17619169-17619252)
chr4 (218-299)||(27893859-27893940)
chr4 (219-299)||(23204795-23204875)
chr4 (216-299)||(55272393-55272476)
chr4 (214-296)||(960890-960972)
chr4 (218-299)||(35037007-35037088)
chr4 (218-299)||(43735744-43735825)
chr4 (215-299)||(48435596-48435680)
chr4 (215-298)||(21687005-21687088)
chr4 (216-283)||(41847971-41848038)
chr4 (216-299)||(45490330-45490413)
chr4 (218-299)||(31680904-31680985)
chr4 (214-273)||(46827749-46827808)
chr4 (218-299)||(41327560-41327641)
chr4 (215-296)||(49229684-49229765)
chr4 (215-275)||(50526088-50526148)
chr4 (215-267)||(30189272-30189324)
[»] chr2 (28 HSPs)
chr2 (216-299)||(1750414-1750497)
chr2 (214-299)||(12302270-12302355)
chr2 (215-299)||(30838631-30838715)
chr2 (214-299)||(43335780-43335865)
chr2 (216-299)||(16096747-16096830)
chr2 (213-295)||(33229298-33229381)
chr2 (217-299)||(19047158-19047240)
chr2 (214-299)||(43114555-43114640)
chr2 (218-298)||(43490419-43490499)
chr2 (216-299)||(12415477-12415560)
chr2 (216-299)||(12427537-12427620)
chr2 (218-299)||(11825671-11825752)
chr2 (217-299)||(34817793-34817875)
chr2 (214-299)||(16803966-16804051)
chr2 (214-299)||(16843248-16843333)
chr2 (218-299)||(41281991-41282072)
chr2 (216-299)||(13780752-13780835)
chr2 (214-299)||(966851-966936)
chr2 (214-299)||(4764743-4764828)
chr2 (215-299)||(18491704-18491788)
chr2 (218-299)||(6518486-6518566)
chr2 (214-299)||(34895758-34895843)
chr2 (218-299)||(4299437-4299518)
chr2 (218-299)||(8896600-8896681)
chr2 (215-299)||(42026766-42026852)
chr2 (216-251)||(42849911-42849946)
chr2 (254-299)||(4451967-4452012)
chr2 (218-259)||(7070418-7070459)
[»] chr5 (14 HSPs)
chr5 (214-299)||(18033980-18034065)
chr5 (214-299)||(33801467-33801552)
chr5 (216-299)||(2614666-2614749)
chr5 (216-299)||(22512305-22512388)
chr5 (216-299)||(41334680-41334763)
chr5 (214-299)||(7617131-7617216)
chr5 (216-299)||(32473411-32473494)
chr5 (216-291)||(33855068-33855143)
chr5 (218-298)||(25915006-25915085)
chr5 (218-299)||(5256997-5257078)
chr5 (215-299)||(17208073-17208157)
chr5 (214-299)||(38470577-38470662)
chr5 (214-299)||(30622736-30622820)
chr5 (215-299)||(39122450-39122533)
[»] scaffold0187 (2 HSPs)
scaffold0187 (215-299)||(14205-14289)
scaffold0187 (215-299)||(24533-24617)
[»] scaffold0038 (1 HSPs)
scaffold0038 (217-299)||(112656-112738)
[»] scaffold0385 (1 HSPs)
scaffold0385 (214-299)||(11249-11334)
[»] scaffold0157 (1 HSPs)
scaffold0157 (216-296)||(23441-23521)
[»] scaffold0100 (1 HSPs)
scaffold0100 (216-299)||(35473-35556)
[»] scaffold0003 (1 HSPs)
scaffold0003 (218-299)||(45736-45817)


Alignment Details
Target: chr1 (Bit Score: 199; Significance: 1e-108; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 5161979 - 5162193
Alignment:
Q  1 catattcgctggaactgttttcagatcagttgaccagtcatgttatgcaaatatgactagattttcgttgaaaaagaaatagctatttggaattagcttt 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5161979 catattcgctggaactgttttcagatcagttgacgagtcatgttatgcaaatatgactagattttcgttgaaaaagaaatagctatttggaattagcttt 5162078  T
Q  101 taagatataataatttttaacagtagggagagaaaaacataatttatagtgtctagagtatgtcttttcaatcaaattgatgaaaaacaattttcaatgt 200  Q
    | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5162079 tgagatataataatttttaacagaagggagagaaaaacataatttatagtgtctagagtatgtcttttcaatcaaattgatgaaaaacaattttcaatgt 5162178  T
Q  201 ctatgtttagcagaa 215  Q
    ||||||||| |||||    
T  5162179 ctatgtttatcagaa 5162193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 216 - 299
Target Start/End: Complemental strand, 43571186 - 43571103
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  43571186 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcac 43571103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 5489774 - 5489859
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||| |||||||||||||||    
T  5489774 aaggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 5489859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 213 - 299
Target Start/End: Complemental strand, 48499065 - 48498979
Alignment:
Q  213 gaaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||||| ||||||| ||||||  ||||||||||| |||| |||||||||||||| |||||||||||||||    
T  48499065 gaaggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcac 48498979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 44112675 - 44112760
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||| || ||||||  |||||||||||||||||||||||| ||||| |||| ||||||||||    
T  44112675 aaggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 44112760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 216 - 299
Target Start/End: Original strand, 38335918 - 38336001
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||| || ||||||| |||||||| ||||||||||| ||||||||| |||| ||||||||||    
T  38335918 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacatcccatgcattaaggatattttggtaaattcatctcac 38336001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 216 - 299
Target Start/End: Original strand, 48119628 - 48119711
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||| || ||||||  |||||||||||||||||||| ||||||||| |||| ||||||||||    
T  48119628 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcac 48119711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 216 - 299
Target Start/End: Original strand, 35003294 - 35003377
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||| || ||||||  |||||||||||||| ||||| ||||||||| |||| ||||||||||    
T  35003294 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatacattaaggatattttggtaaattcatctcac 35003377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 216 - 299
Target Start/End: Original strand, 37814778 - 37814861
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||| |||||||||||||| |||| |||||||||||||||||| |||| ||||||||| |||| ||||| ||||    
T  37814778 ggaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcac 37814861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 4401329 - 4401411
Alignment:
Q  218 aaaatgttacatgaacacccttt-attcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||| ||||||||||| |||| |||||||||| ||||||||||||||||| ||||| |||||||| |||||||||||||||    
T  4401329 aaaatgatacatgaacactcttttattcctacacttcattgtacaccccatgtattagagatattttggtaagttcatctcac 4401411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 292
Target Start/End: Complemental strand, 24769601 - 24769523
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttc 292  Q
    |||||||||||| |||||||||| |||||| ||||||  |||||||||||||||| |||||||||||||| ||||||||    
T  24769601 aaggaaaatgtttcatgaacaccttttatttctacactccattgtacaccccatgtattagggatattttggtaagttc 24769523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 215 - 299
Target Start/End: Original strand, 41065152 - 41065236
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||||||||| || ||||||   ||||||||||||||||||||||  ||||| |||| ||||||||||    
T  41065152 aggaaaatgttacatgaacaccctttaatcatacaccctgttgtacaccccatgcattaggggcattttggtaatttcatctcac 41065236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 50448360 - 50448280
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatct 296  Q
    |||||||||||||||||||| ||||||| ||||||  |||||||||||  ||| |||||||||||||| ||||||||||||    
T  50448360 ggaaaatgttacatgaacactctttatttctacactccattgtacaccttatgtattagggatatttttgtaagttcatct 50448280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 298
Target Start/End: Complemental strand, 750406 - 750323
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctca 298  Q
    ||||||||||||| |||||||||||  |||||||||| |||||||||||||||| || |||||||||||  ||| |||||||||    
T  750406 aggaaaatgttacgtgaacacccttatttcctacaccccattgtacaccccatgtatcagggatattttgataaattcatctca 750323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 45639834 - 45639749
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||| ||||| || |||| |  |||||||||||||| ||||| ||||||||| |||| ||||||||||    
T  45639834 aaggaaaatgttacatgaacactctttaatcatacatcctattgtacaccccatacattaaggatattttggtaaattcatctcac 45639749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 299
Target Start/End: Complemental strand, 38113296 - 38113212
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||| |||||||||||||| || ||||||  ||||||||||||||||||||  || ||||| |||| ||||||||||    
T  38113296 aggaaaatgttatatgaacaccctttaatcatacaccctattgtacaccccatgcattaatgacattttggtaaattcatctcac 38113212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 299
Target Start/End: Complemental strand, 45427846 - 45427762
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||| ||| |||| || ||||||  ||||||||| |||||||||||||| ||||| |||| ||||||||||    
T  45427846 aggaaaatgttacatgaataccttttaatcatacaccctattgtacactccatgcattagggacattttggtaatttcatctcac 45427762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 297
Target Start/End: Original strand, 26585460 - 26585543
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctc 297  Q
    ||||||||||||| |||||||  ||||| || |||||   |||||||||||||||||||| |||||||||||||| ||||||||    
T  26585460 aaggaaaatgttagatgaacattctttaatcatacactatattgtacaccccatgcattaaggatattttagtaaattcatctc 26585543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 216 - 299
Target Start/End: Original strand, 46168383 - 46168466
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||| || || | |  ||||||||||| |||||||| ||||||||| |||| ||||||||||    
T  46168383 ggaaaatgttacatgaacaccctttaatcatatatcctattgtacacccaatgcattaaggatattttggtaaattcatctcac 46168466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 2497660 - 2497579
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||| |||||| ||||||| ||||   |||||||||||||||  |||| ||||||||| |||||||||||||||    
T  2497660 aaaatgttacataaacaccatttattcatacattccattgtacaccccatatattaaggatattttggtaagttcatctcac 2497579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 7447828 - 7447908
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||| |||||||||||||| | ||||||||| |||||| ||||  ||||||||  ||||||||||||||    
T  7447828 aaaatgttacatgaacatcctttattcctacatcccattgtaca-cccatgtattacagatattttgataagttcatctcac 7447908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 273
Target Start/End: Original strand, 14427345 - 14427404
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcatta 273  Q
    |||||||||||||||||||||||||||| || ||||||  |||||||||| |||||||||    
T  14427345 aaggaaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcatta 14427404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 23989626 - 23989540
Alignment:
Q  214 aaggaaaatgttacatgaacaccc-tttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||| ||||||| |||||   |||||| |||| ||| |||||||||||||| |||| || |||||||    
T  23989626 aaggaaaatgttacatgaacacccttttattcatacactcaattgtataccctatgtattagggatattttggtaaatttatctcac 23989540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 299
Target Start/End: Original strand, 45705824 - 45705908
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||| |||||||||||||| || ||||    ||||||||| |||||||||| ||| |||||  ||| ||||||||||    
T  45705824 aggaaaatgttatatgaacaccctttaatcatacattctattgtacactccatgcattatggacattttgataaattcatctcac 45705908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 216 - 275
Target Start/End: Original strand, 51898601 - 51898660
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagg 275  Q
    |||||||||||||| ||||||||||||| ||| ||  | |||||||||||||||| ||||    
T  51898601 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactagg 51898660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 249
Target Start/End: Original strand, 4888055 - 4888088
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctaca 249  Q
    |||||||||||||||||| |||||||||||||||    
T  4888055 ggaaaatgttacatgaacgccctttattcctaca 4888088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 4e-35; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 216 - 299
Target Start/End: Original strand, 42100688 - 42100771
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  42100688 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcac 42100771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 46941051 - 46941136
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||    
T  46941051 aaggaaaatgttacatgaacaccctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctcac 46941136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 40808863 - 40808948
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||    
T  40808863 aaggaaaatgttacatcaacaccatttattcctacaccccattgtacaccccatgtattagggatattttggtaagttcatctcac 40808948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 54246250 - 54246165
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||| |||||||| |||||||||||||||    
T  54246250 aaggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagagatatttttgtaagttcatctcac 54246165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 215 - 299
Target Start/End: Original strand, 25413680 - 25413764
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||  ||| |||||||||||||| |||||||||||||||    
T  25413680 aggaaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattagggatatttttgtaagttcatctcac 25413764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 217 - 299
Target Start/End: Original strand, 54237097 - 54237179
Alignment:
Q  217 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||| |||||||||||||||    
T  54237097 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 54237179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 24688504 - 24688419
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||||| ||||||  |||||||||||| ||| |||||||||||||| |||||||||||||||    
T  24688504 aaggaaaatgttacatgaacaccctttatttctacactccattgtacaccctatgtattagggatattttggtaagttcatctcac 24688419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 47191127 - 47191043
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||  ||||||||||||||    
T  47191127 aaggaaaatgttacatgaacaccctttattcctacacctcattgtaca-cccatgtattagagatattttgataagttcatctcac 47191043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 216 - 299
Target Start/End: Complemental strand, 45127028 - 45126945
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||| |||||||||||||| |||| | |||||||||||||||| |||||||||||||| |||||||||||||||    
T  45127028 ggaaaatgttacataaacaccctttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcac 45126945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 217 - 299
Target Start/End: Complemental strand, 42394518 - 42394436
Alignment:
Q  217 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||||||||   |||||||||||| ||| |||||||||||||| |||||||||||||||    
T  42394518 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcac 42394436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 53273786 - 53273701
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||| ||||||| | |||||||||| ||||||||||||| |||||| |||||||||||||| |||||||||||||||    
T  53273786 aaggaaaatgttatatgaacatcatttattcctatacctcattgtacatcccatgtattagggatattttggtaagttcatctcac 53273701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 9434122 - 9434207
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||| || |||||   |||||||||||||||||||||||| ||||| |||| ||||||||||    
T  9434122 aaggaaaatgttacatgaacaccctttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcac 9434207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 27748565 - 27748646
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||| ||||||| ||||||||||| ||||||  ||| |||||||||||||| |||||||||||||||    
T  27748565 aaaatgttacatgaacaccttttattcatacacctcattatacaccttatgtattagggatattttggtaagttcatctcac 27748646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 212 - 299
Target Start/End: Complemental strand, 10457996 - 10457909
Alignment:
Q  212 agaaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||||||| |||| || ||||||  |||||||||||||||||||| ||||||||| |||| || |||||||    
T  10457996 agaaggaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaatttatctcac 10457909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 216 - 299
Target Start/End: Original strand, 36150130 - 36150213
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||| ||||||||||| |||||| |||| ||||||| ||| || ||||||||||| |||||||||||||||    
T  36150130 ggaaaatgttacatgaataccctttattcatacaccccattatacaccctatgtatcagggatattttggtaagttcatctcac 36150213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 217 - 299
Target Start/End: Original strand, 40480750 - 40480832
Alignment:
Q  217 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||| ||  || ||||||||| || ||| |||||||||||||| |||||||||||||||    
T  40480750 gaaaatgttacatgaacaccctttattcatatgccccattgtacatcctatgtattagggatattttggtaagttcatctcac 40480832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 1078229 - 1078309
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||  ||| |||| ||||||||| ||| |||||||||||    
T  1078229 aaaatgttacatgaacaccctttattcctgcacctcattgtacacctaatgtatta-ggatatttttgtaggttcatctcac 1078309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 299
Target Start/End: Original strand, 34791829 - 34791912
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||| || ||||||  |||||| ||| ||||||||||||| |||||| ||| ||||||||||    
T  34791829 ggaaaatgttacatgaacaccctttaatcatacaccatattgtaaacctcatgcattagggacattttaataatttcatctcac 34791912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 4190367 - 4190282
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||| || ||||||  ||||||||||  ||| ||||| |||||||| |||| ||||||||||    
T  4190367 aaggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccttatgtattagagatattttggtaaattcatctcac 4190282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 53581956 - 53581875
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||| |||||||| |||||  ||||||||| || ||| ||||||||||||||  ||||||||||||||    
T  53581956 aaaatgttacatgaacactctttattcatacactccattgtacatcctatgtattagggatattttgataagttcatctcac 53581875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 299
Target Start/End: Original strand, 25996267 - 25996351
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||||||||| || |||| || ||||||||||||||  |||| ||| ||||| |||| ||||||||||    
T  25996267 aggaaaatgttacatgaacaccctttaatcatacatcttattgtacaccccatatattaaggacattttggtaaattcatctcac 25996351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 216 - 299
Target Start/End: Original strand, 51757593 - 51757676
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||| |||||| ||||||||||| || ||||||  |||||||||| ||||||||| ||| |||||||||| ||||||||||    
T  51757593 ggaaaatattacataaacaccctttaatcatacaccctattgtacacctcatgcattatggacattttagtaatttcatctcac 51757676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 299
Target Start/End: Complemental strand, 52628080 - 52627994
Alignment:
Q  213 gaaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||| ||||||||||||| || |||| |  |||||||||| ||||||||| | ||||||| |||| ||||||||||    
T  52628080 gaaggaaaatgttacgtgaacaccctttaatcatacatcctattgtacacctcatgcattaagtatattttggtaaattcatctcac 52627994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 29558336 - 29558251
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||| ||||||| ||||||||||||||||| |||| |||||||||||||| ||  |||||| |||| || |||| ||||||||||    
T  29558336 aaggacaatgttatatgaacaccctttattcatacatctcattgtacaccctatatattaggaatatattggtaaattcatctcac 29558251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 11064822 - 11064755
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatatttt 283  Q
    |||||||||||||  |||||| | ||||||| ||||||||||||||||||| |||| |||| ||||||||    
T  11064822 aaggaaaatgtta--tgaacatcatttattcatacacctcattgtacaccctatgctttagagatatttt 11064755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 683 - 768
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||    
T  683 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcac 768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 6e-34; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 26670111 - 26670026
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||    
T  26670111 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcac 26670026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 7273437 - 7273352
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||| |||||||||||||||    
T  7273437 aaggaaaatgttacatgaacaccctttattcctacaccttattgtacaccccatgtattagagatattttggtaagttcatctcac 7273352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 215 - 299
Target Start/End: Complemental strand, 9698434 - 9698350
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||| |||||||||||||||    
T  9698434 aggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 9698350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 26466797 - 26466882
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||| ||||| ||||||| |||||| |||||||||||||||    
T  26466797 aaggaaaatgttacataaacaccctttattcctacaccccattgtacactccatgtattagggttattttggtaagttcatctcac 26466882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 7292745 - 7292830
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||| ||||||| ||| |||||||||||||| |||||||||||||||    
T  7292745 aaggaaaatgttacaagaacaccatttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcac 7292830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 7367547 - 7367632
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||| ||||||| | ||||||| |||||||||||||||| |||||| |||||||||||||| |||||||||||||||    
T  7367547 aaggaaaatgttatatgaacatcatttattcatacacctcattgtacatcccatgtattagggatattttggtaagttcatctcac 7367632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 24204085 - 24204004
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||| ||||||||||||||  ||||||||| ||||| |||||||||||||| |||||||||||||||    
T  24204085 aaaatgttacatgaacaccatttattcctacaccctattgtacactccatgtattagggatattttggtaagttcatctcac 24204004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 216 - 299
Target Start/End: Complemental strand, 13743321 - 13743238
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||| ||||||| |||| |  ||||||||||||||| |||||||||||||| |||||||||||||||    
T  13743321 ggaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcac 13743238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 216 - 299
Target Start/End: Complemental strand, 13748821 - 13748738
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||| ||||||| |||| |  ||||||||||||||| |||||||||||||| |||||||||||||||    
T  13748821 ggaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcac 13748738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 216 - 299
Target Start/End: Original strand, 30014343 - 30014426
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||||||||| | |||| |||| |||||| |||||| ||||||| |||||||||||||||    
T  30014343 ggaaaatgttacatgaacaccctttattcctacatcccattatacatcccatgtattaggcatattttggtaagttcatctcac 30014426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 3213398 - 3213483
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||| |||||||||||||| |||| |||||||||||||||||| |||| ||||||||| |||| ||||| ||||    
T  3213398 aaggaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcac 3213483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 30735984 - 30736065
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||  |||||||||||||| ||||||||||| |||| ||||| |||||||| |||||||||||||||    
T  30735984 aaaatgttacatgaacactttttattcctacaccccattgtacacctcatgtattagtgatattttggtaagttcatctcac 30736065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 33242401 - 33242486
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||||| |||| || ||||||| ||||||||||||||| |||| ||| ||||| |||| ||||||||||    
T  33242401 aaggaaaatgttacatgaacaccatttaatcatacaccttattgtacaccccatgtattaaggacattttggtaaattcatctcac 33242486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 215 - 299
Target Start/End: Original strand, 21279928 - 21280012
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||||||||||| |||||   ||||| ||| |||||| |||||||||||||| |||| ||||||||||    
T  21279928 aggaaaatgttacatgaacaccctttatttctacattccattgcacatcccatgtattagggatattttggtaaattcatctcac 21280012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 299
Target Start/End: Complemental strand, 21293778 - 21293694
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||| |||||||||||||| ||||  ||| ||||||||||||| |||| ||||||||| |||| ||||| ||||    
T  21293778 aggaaaatgttacataaacaccctttattcatacatttcactgtacaccccatgtattaaggatattttggtaaattcatttcac 21293694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 31109323 - 31109255
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatatttt 283  Q
    ||||||||||||||||||||||||||| || |||| | |||| ||||||||||||| ||||||||||||    
T  31109323 aggaaaatgttacatgaacaccctttaatcatacatcccattatacaccccatgcactagggatatttt 31109255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 216 - 299
Target Start/End: Original strand, 33253913 - 33253996
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||| |||| ||  |||||  |||||||||||||||||||||||| || || |||| ||||||||||    
T  33253913 ggaaaatgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcac 33253996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 27441544 - 27441625
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||| || ||||||  |||||||| || ||| |||| ||||||||| |||| ||||||||||    
T  27441544 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcac 27441625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 42295197 - 42295278
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||    
T  42295197 aaaatgttacatgaacaccctttattcctacacctcattgtacactccatgtattagggatattttggtaagttcatctcac 42295278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 36743585 - 36743500
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||| |||||||||||||||    
T  36743585 aaggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 36743500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 216 - 299
Target Start/End: Original strand, 11582766 - 11582849
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||| |||||||||||||||    
T  11582766 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 11582849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 216 - 299
Target Start/End: Original strand, 29705362 - 29705445
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||  ||||||||||||||    
T  29705362 ggaaaatgttacatgaacaccctttatttctacaccccattgtacaccccatgtattagggatattttgataagttcatctcac 29705445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 215 - 299
Target Start/End: Original strand, 2546995 - 2547079
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||| ||||||| ||||||  ||||||||||| |||| ||||||||||||||||||||||||||||||    
T  2546995 aggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttagtaagttcatctcac 2547079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 214 - 296
Target Start/End: Complemental strand, 30660844 - 30660762
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatct 296  Q
    |||||||||||||||||||||||||||||| ||||| | |||||||||||| ||| |||||||||||||| ||||||||||||    
T  30660844 aaggaaaatgttacatgaacaccctttatttctacatcccattgtacaccctatgtattagggatattttggtaagttcatct 30660762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 217 - 299
Target Start/End: Original strand, 45397317 - 45397399
Alignment:
Q  217 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||| ||||||||||||||||||||||| |||| ||||||| ||| |||||||||||||| |||||||||||||||    
T  45397317 gaaaatgttacgtgaacaccctttattcctacaccccattctacaccctatgtattagggatatttttgtaagttcatctcac 45397399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 5754901 - 5754986
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||||| |||||||||||| | ||||||||| |||||  |||||||||||||| |||||||||||||||    
T  5754901 aaggaaaatgttacatgaacaccttttattcctacatcccattgtacatcccatatattagggatattttggtaagttcatctcac 5754986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 30912660 - 30912579
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||||||||| ||||||||||  |||| ||||||| |||||| |||||||||||||||    
T  30912660 aaaatgttacatgaacaccctttattcctacaccccattgtacacttcatgtattaggggtattttggtaagttcatctcac 30912579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 33630091 - 33630010
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||| |||||||||||| || ||||||||||||||||||| |||||||||||| |||||||||| ||||||||||    
T  33630091 aaaatgttacacgaacaccctttaatcatacacctcattgtacaccctatgcattagggacattttagtaatttcatctcac 33630010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 35181514 - 35181599
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||| || ||||||  |||||||||||||||||||||||| ||||| |||| ||||||||||    
T  35181514 aaggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 35181599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 42699259 - 42699340
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||||||||| |||||||||||  ||| |||| ||||||||| |||||||||||||||    
T  42699259 aaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattatggatatttttgtaagttcatctcac 42699340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 215 - 299
Target Start/End: Complemental strand, 42197536 - 42197452
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||| |||||||||||||| ||||| |||| | ||| |||||||||||||| |||||||||||||||    
T  42197536 aggaaaatgttacatgaacaccatttattcctacaccccattgcacacactatgtattagggatattttggtaagttcatctcac 42197452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 216 - 298
Target Start/End: Complemental strand, 2166063 - 2165981
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctca 298  Q
    ||||||| ||||||||||||| |||||||||||||| ||||||| |||||||| ||||| |||||||| ||||||||||||||    
T  2166063 ggaaaatattacatgaacaccatttattcctacaccccattgtataccccatgtattagagatattttggtaagttcatctca 2165981  T

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Target: chr8; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 29801048 - 29800967
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||| |||||| ||||||| |||| | |||||||||||||||| |||||||||||||| |||||||||||||||    
T  29801048 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcac 29800967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 34304786 - 34304871
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||| |||||| || ||||||  |||||||||||||||||||||||| ||||| |||| ||||||||||    
T  34304786 aaggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 34304871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 20148762 - 20148843
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||| |||||||||||||| |||| | ||||||||||| |||  |||||||||||||| |||||||||||||||    
T  20148762 aaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcac 20148843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 26125637 - 26125718
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||| |||||||||||||| ||||   |||||||||||| ||| |||||||||||||| |||||||||||||||    
T  26125637 aaaatgttacataaacaccctttattcatacattccattgtacaccctatgtattagggatattttggtaagttcatctcac 26125718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 215 - 299
Target Start/End: Complemental strand, 18066819 - 18066735
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||||||||| || ||||    |||||||| |||||| ||||||||||||||||||| ||||||||||    
T  18066819 aggaaaatgttacatgaacaccctttaatcatacattctattgtacatcccatgtattagggatattttagtaatttcatctcac 18066735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 299
Target Start/End: Complemental strand, 16603727 - 16603643
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||| |||||||||| || ||||||| ||| ||||||||||||||||  || ||||| |||| ||||||||||    
T  16603727 aggaaaatgttacatgcacaccctttaatcatacaccttattatacaccccatgcattaaagacattttggtaaattcatctcac 16603643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 299
Target Start/End: Original strand, 31384663 - 31384747
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||| | ||||||||||||||||||||| ||||    ||||||||||||||| |||||| ||||||| |||||||||||||||    
T  31384663 aggaaagtattacatgaacaccctttattcttacattctattgtacaccccatgtattaggaatattttggtaagttcatctcac 31384747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 216 - 299
Target Start/End: Original strand, 1375542 - 1375625
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||| ||||||||||||| ||||||| ||||||  ||||||||||||||  |||||||||||||| |||| || |||||||    
T  1375542 ggaaaattttacatgaacaccttttattcatacacccaattgtacaccccatatattagggatattttggtaaatttatctcac 1375625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 253
Target Start/End: Original strand, 28977146 - 28977183
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctc 253  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28977146 ggaaaatgttacatgaacaccctttattcctacacctc 28977183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 299
Target Start/End: Complemental strand, 16358933 - 16358850
Alignment:
Q  217 gaaaatgttacat-gaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||| ||| |||||||| || ||||||  |||||||| ||||||||||| | |||||||  ||| ||||||||||    
T  16358933 gaaaatgttacattgaagaccctttaatcatacaccctattgtacatcccatgcattaagaatattttgataaattcatctcac 16358850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 216 - 275
Target Start/End: Complemental strand, 37038661 - 37038602
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagg 275  Q
    |||||||||||||| ||||||||||||| ||| ||  | |||||||||||||||| ||||    
T  37038661 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactagg 37038602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 19386672 - 19386635
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacc 251  Q
    |||||||||||||||||||||||||||| || ||||||    
T  19386672 aaggaaaatgttacatgaacaccctttaatcatacacc 19386635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 6e-31; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 215 - 299
Target Start/End: Original strand, 35069720 - 35069804
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||    
T  35069720 aggaaaatgttacatgaacactctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcac 35069804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 216 - 299
Target Start/End: Complemental strand, 24001112 - 24001029
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||| |||||||||||||||    
T  24001112 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 24001029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 216 - 299
Target Start/End: Complemental strand, 42538531 - 42538448
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||| |||||||||||||||    
T  42538531 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 42538448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 5015393 - 5015478
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||| ||||||| ||||||  ||||||||||| |||| |||||||||||||| |||||||||||||||    
T  5015393 aaggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcac 5015478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 216 - 299
Target Start/End: Complemental strand, 5811024 - 5810941
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||| ||  ||||||||||||||  ||||||||||||||    
T  5811024 ggaaaatgttacatgaccaccctttattcctacaccccattgtacaccctatatattagggatattttgataagttcatctcac 5810941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 216 - 299
Target Start/End: Original strand, 42972852 - 42972935
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||| |||||| |||||||||||||||  ||||||||||| |||| |||||||||||||| |||||||||||||||    
T  42972852 ggaaaatgttacctgaacatcctttattcctacactccattgtacacctcatgtattagggatattttggtaagttcatctcac 42972935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 40236917 - 40237002
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||| || |||| |  |||||||||||||||||||||||| ||||| |||| ||||||||||    
T  40236917 aaggaaaatgttacatgaacaccctttaatcatacatcctattgtacaccccatgcattagggacattttggtaatttcatctcac 40237002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 215 - 299
Target Start/End: Original strand, 9216301 - 9216384
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||||||||||||||| | |  |||||||| |||||||||||| |||||||| |||||||||||||||    
T  9216301 aggaaaatgttacatgaacaccctttattcctatatcctattgtaca-cccatgcattagagatattttggtaagttcatctcac 9216384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 215 - 299
Target Start/End: Original strand, 43317442 - 43317526
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||| || |||| |||||||||||||  ||| ||||||||||    
T  43317442 aggaaaatgttacatgaacaccatttattcatacacctcattgtacatcctatgctttagggatattttgataaattcatctcac 43317526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 43343722 - 43343641
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||| | |||||| |||||||  ||||||||||||||| ||||||||||||||  ||||||||||||||    
T  43343722 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcac 43343641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 44326180 - 44326261
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||| |||||||||||||| |||| | ||||||||||| |||  |||||||||||||| |||||||||||||||    
T  44326180 aaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcac 44326261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 44417032 - 44416951
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||| | |||||| |||||||  ||||||||||||||| ||||||||||||||  ||||||||||||||    
T  44417032 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcac 44416951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 215 - 299
Target Start/End: Complemental strand, 5194332 - 5194248
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||| |||  ||| |||||||||  ||| ||||||||||    
T  5194332 aggaaaatgttacatgaacaccatttattcatacacctcattgtacaccctatgttttaaggatattttgataaattcatctcac 5194248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 299
Target Start/End: Original strand, 31513287 - 31513370
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||| ||||| || ||||||  |||||| ||||||||||||| ||||||||| |||| ||||||||||    
T  31513287 ggaaaatgttacatgaacactctttaatcatacaccctattgtataccccatgcattaaggatattttggtaaattcatctcac 31513370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 299
Target Start/End: Original strand, 45326020 - 45326103
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||| |||||||| |||||| ||||||| |||| | |||||||||||||||  |||||||||||||| |||||||||||||||    
T  45326020 ggaaagtgttacataaacaccttttattcatacatcacattgtacaccccatatattagggatattttggtaagttcatctcac 45326103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 4638297 - 4638216
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||| ||||||| |||||   ||||||||||||||  |||| ||||||||| |||||||||||||||    
T  4638297 aaaatgttacatgaacaccttttattcatacactcaattgtacaccccatatattatggatattttggtaagttcatctcac 4638216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 10573751 - 10573832
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||| |||||||||||||| |||| |  ||||||||||||||| |||||| ||||||| |||| ||||||||||    
T  10573751 aaaatgttacataaacaccctttattcatacatcctattgtacaccccatgtattaggaatattttggtaaattcatctcac 10573832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 26898499 - 26898422
Alignment:
Q  219 aaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatct 296  Q
    |||||||||||||||||| ||||||| ||||||  ||||||||  ||||| |||||||||||||| ||||||||||||    
T  26898499 aaatgttacatgaacaccttttattcatacacccaattgtacattccatgtattagggatattttggtaagttcatct 26898422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 225 - 296
Target Start/End: Complemental strand, 32029908 - 32029837
Alignment:
Q  225 tacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatct 296  Q
    ||||| |||||  |||||||||||||| |||||||||||||||| |||||||||||||| |||| |||||||    
T  32029908 tacataaacactttttattcctacaccccattgtacaccccatgtattagggatattttggtaaattcatct 32029837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 299
Target Start/End: Complemental strand, 31408732 - 31408650
Alignment:
Q  217 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||||||| || |||||   |||||||| ||||||||||| ||||||||| |||| ||||| ||||    
T  31408732 gaaaatgttacatgaacaccctttaatcatacactctattgtacatcccatgcattaaggatattttggtaaattcatttcac 31408650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 299
Target Start/End: Complemental strand, 24280697 - 24280613
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||| |||||||||||||||| ||||||  ||| |||| |||||||| |||  ||||||| |||| ||||||||||    
T  24280697 aggaaaatgttacgtgaacaccctttattcatacaccctattctacatcccatgcactagaaatattttggtaaattcatctcac 24280613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 299
Target Start/End: Complemental strand, 38160656 - 38160596
Alignment:
Q  239 ttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||| |||||  |||||||||||||||| ||||||||||||||||||| ||||||||||    
T  38160656 ttattcttacactccattgtacaccccatgtattagggatattttagtaacttcatctcac 38160596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 41861672 - 41861759
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcat--tagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||||||||||||| ||||||  ||| ||||||| ||| ||  ||| |||||||| ||||||| |||||||    
T  41861672 aaggaaaatgttacatgaacaccctttattcatacacccaattatacaccctatgtattatagagatattttggtaagtttatctcac 41861759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 299
Target Start/End: Complemental strand, 27393344 - 27393277
Alignment:
Q  232 acaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||| |  ||||||||| | ||| |||||||||||||| |||||||||||||||    
T  27393344 acaccctttattcctacatcctattgtacactctatgtattagggatatttttgtaagttcatctcac 27393277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 33384868 - 33384954
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctc-attgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||| | |||| || |||||| | |||||| || |||||||||||||| ||||| |||| ||||||||||    
T  33384868 aaggaaaatgttacatgaacatcatttaatcatacacccctattgtatactccatgcattagggacattttggtaaattcatctcac 33384954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 16180454 - 16180374
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||| |||||| |||||||||||||| |||||||||||||| | ||||   ||||||| |||| ||||||||||    
T  16180454 aaaatgttacatcaacaccatttattcctacacc-cattgtacaccccacgtattataaatattttggtaaattcatctcac 16180374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 283
Target Start/End: Original strand, 39998408 - 39998475
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatatttt 283  Q
    ||||||||||||||||||||  |||| || |||| |  ||||||||||||||| ||||||||||||||    
T  39998408 ggaaaatgttacatgaacacattttaatcatacatcctattgtacaccccatgtattagggatatttt 39998475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 249
Target Start/End: Complemental strand, 38160695 - 38160661
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctaca 249  Q
    |||||||||||||||||||||||||||||||||||    
T  38160695 aggaaaatgttacatgaacaccctttattcctaca 38160661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 27535333 - 27535248
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||| || |||||   ||||||||| |||||  |||  || ||||| |||| ||||||||||    
T  27535333 aaggaaaatgttacatgaacaccctttaatcatacactctattgtacactccatgtgttaaagacattttggtaatttcatctcac 27535248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 275
Target Start/End: Complemental strand, 35523060 - 35522999
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagg 275  Q
    |||||||||||||||| |||||| |||||||| | ||  | ||||||||||||| |||||||    
T  35523060 aaggaaaatgttacataaacaccatttattcccatacacccttgtacaccccatacattagg 35522999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 47279798 - 47279745
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatg 268  Q
    |||||||| |||||| || ||||||||||| |||| | ||||||||||||||||    
T  47279798 aggaaaatattacataaataccctttattcatacatcccattgtacaccccatg 47279745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 212 - 299
Target Start/End: Original strand, 33703137 - 33703224
Alignment:
Q  212 agaaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||||||| ||||| || ||||||||||||||| |||||||||||||| |||||||||||||||    
T  33703137 agaaggaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcac 33703224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 1771368 - 1771283
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||  ||||||||||||||    
T  1771368 aaggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattagagatattttgataagttcatctcac 1771283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 25051691 - 25051776
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||| |||||||||| ||||||||||||||| |||||||||||| ||| |||||||||||||| |||||||||||||||    
T  25051691 aaggaaaatgtcacatgaacacactttattcctacaccccattgtacaccctatgtattagggatattttggtaagttcatctcac 25051776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 214 - 298
Target Start/End: Original strand, 28988471 - 28988555
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctca 298  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||  ||| |||||||||    
T  28988471 aaggaaaatgttacatgaacaccctttattcatacacctcattgtacaccccatgcactagggacattttgataaattcatctca 28988555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 216 - 299
Target Start/End: Original strand, 35017733 - 35017815
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||| | |||||||||||| |||||||||||||||    
T  35017733 ggaaaatgttacatgaacaccctttattcctatatctcattgtacaccccatgta-tagggatattttggtaagttcatctcac 35017815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 216 - 298
Target Start/End: Complemental strand, 27316813 - 27316731
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctca 298  Q
    ||||||||||| | ||||||||||||||||||||||||||| ||||||||||| |||| ||||||||| ||||||||||||||    
T  27316813 ggaaaatgttaaacgaacaccctttattcctacacctcattatacaccccatgtattaaggatattttggtaagttcatctca 27316731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 217 - 299
Target Start/End: Original strand, 41878407 - 41878489
Alignment:
Q  217 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||| || |||||||||||||||  ||||||||||||||    
T  41878407 gaaaatgttacatgaacactctttattcatacacctcattgtacaccctatccattagggatattttgataagttcatctcac 41878489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 43949900 - 43949818
Alignment:
Q  218 aaaatgttacatgaacacccttt-attcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||| |||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  43949900 aaaatgatacatgaacacccttttattcctgcacctcattgtacaccccatgtattagggatattttggtaagttcatctcac 43949818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 27864562 - 27864647
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||| |||||| ||||||| |||| | |||||||||||||||| |||||||||||||| |||||||||||||||    
T  27864562 aaggaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcac 27864647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 28982924 - 28982839
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||||| |||||||  |||||||| |||||  |||||||||||||| |||||||||||||||    
T  28982924 aaggaaaatgttacatgaacaccctttatttctacaccctattgtacatcccatatattagggatattttggtaagttcatctcac 28982839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 55966448 - 55966363
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||| |||||||||||||| |||| | ||||||||| |||||| |||||||||||||| |||||||||||||||    
T  55966448 aaggaaaatgttacataaacaccctttattcatacatcccattgtacatcccatgtattagggatattttggtaagttcatctcac 55966363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 27550309 - 27550389
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatct 296  Q
    |||||||||||||||||||||||||||| ||||||  ||||||||||| |||| |||||||||||||| ||||||||||||    
T  27550309 ggaaaatgttacatgaacaccctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatct 27550389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 212 - 299
Target Start/End: Original strand, 711956 - 712043
Alignment:
Q  212 agaaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||||| || ||||||  ||||||||||| |||||||| ||||||||| |||| ||||||||||    
T  711956 agaaggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccctatgcattaaggatattttggtaaattcatctcac 712043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 39631102 - 39631184
Alignment:
Q  218 aaaatgttacatgaacacccttt-attcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||| ||||||||| |||||| ||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||    
T  39631102 aaaatgatacatgaacccccttttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcac 39631184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 3756344 - 3756263
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||| || ||||||  |||||||||||||||||||| |||||||||||||| || |||||||    
T  3756344 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttagtaaatttatctcac 3756263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 23035978 - 23036063
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||  ||||||||||||||||  ||||||||||| ||  |||||||||||||| |||||||||||||||    
T  23035978 aaggaaaatgttacatgaacctcctttattcctacaccctattgtacaccctatatattagggatatttttgtaagttcatctcac 23036063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 43514784 - 43514703
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||||||||  ||||||||||  |||| ||||||| |||||| |||||||||||||||    
T  43514784 aaaatgttacatgaacaccctttattcctacactccattgtacacttcatgtattagggttattttggtaagttcatctcac 43514703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 12496956 - 12497036
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatct 296  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||| |||||| ||||| |||||||| ||||||||||||    
T  12496956 ggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatct 12497036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 215 - 299
Target Start/End: Original strand, 32728356 - 32728440
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||| |||||| || ||||||  |||||||||||||||||||| ||| |||||||||| ||||||||||    
T  32728356 aggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacattttagtaaattcatctcac 32728440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 215 - 299
Target Start/End: Complemental strand, 48463551 - 48463467
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||| |||||| ||||||| ||||  |||||||||| |||||| |||||||||||||| |||||||||||||||    
T  48463551 aggaaaatgttacataaacaccatttattcatacatttcattgtacatcccatgtattagggatattttggtaagttcatctcac 48463467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 216 - 299
Target Start/End: Complemental strand, 17619252 - 17619169
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||| |||| || ||||||  |||||||||||||||||||| ||||||||| |||| ||||||||||    
T  17619252 ggaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcac 17619169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 27893940 - 27893859
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||| |||||| ||||||| |||| | |||||||||||||||| |||||||||||||| |||| ||||||||||    
T  27893940 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcac 27893859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 299
Target Start/End: Complemental strand, 23204875 - 23204795
Alignment:
Q  219 aaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||| ||||||||||||| | ||||||||| || ||| |||||||||||||| |||||||||| ||||    
T  23204875 aaatgttacatgaacactctttattcctacatcccattgtacatcctatgtattagggatatttttgtaagttcatgtcac 23204795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 299
Target Start/End: Complemental strand, 55272476 - 55272393
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||| |||||| || |||||   |||||||||||||||||||| ||||||||| |||| ||||||||||    
T  55272476 ggaaaatgttacatgaacatcctttaatcatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcac 55272393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 296
Target Start/End: Complemental strand, 960972 - 960890
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatct 296  Q
    |||||||||||||||||||||||||||| || |||||   ||||||||||| || ||||||||| ||||| |||| |||||||    
T  960972 aaggaaaatgttacatgaacaccctttaatcatacactctattgtacaccctatacattagggacattttggtaaattcatct 960890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 35037007 - 35037088
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||| |||||||||  | |||||   |||||||||||||||||||| ||||||||| |||| ||||||||||    
T  35037007 aaaatgttacatgagcaccctttaaccatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcac 35037088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 43735744 - 43735825
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||| ||||||||||| |||||||||||||| |||||| ||||  ||||| ||||| ||||||||  ||||||||||||||    
T  43735744 aaaatattacatgaacatcctttattcctacatctcattatacattccatgtattagagatattttgataagttcatctcac 43735825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 299
Target Start/End: Complemental strand, 48435680 - 48435596
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||| ||||||||||||||| |||| ||  |||||  |||||||||||||||||||||||| || || |||| ||||||||||    
T  48435680 aggaaagtgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcac 48435596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 298
Target Start/End: Original strand, 21687005 - 21687088
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctca 298  Q
    |||||||||||||||||||| ||||||||  |||||| |||| |||| |  ||| |||||  ||||||||||||||||||||||    
T  21687005 aggaaaatgttacatgaacatcctttatttttacaccccattatacatcttatgtattagaaatattttagtaagttcatctca 21687088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 283
Target Start/End: Original strand, 41847971 - 41848038
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatatttt 283  Q
    ||||||||||||| ||||| ||||| |||  |||||||||||||||||||||||||||| || |||||    
T  41847971 ggaaaatgttacaagaacatccttttttcacacacctcattgtacaccccatgcattagagacatttt 41848038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 299
Target Start/End: Complemental strand, 45490413 - 45490330
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||  ||||||  |||| |  |||||||||| |||| |||||||||| |||||||| ||||||||||    
T  45490413 ggaaaatgttacatgaacacattttatttatacatccaattgtacacctcatgtattagggatactttagtaaattcatctcac 45490330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 31680904 - 31680985
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||| | |||||| ||||||| ||||   ||||||||||||| |  |||||||||||||| |||||||||||||||    
T  31680904 aaaatgttacgtaaacaccatttattcatacattccattgtacaccccgtatattagggatattttggtaagttcatctcac 31680985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 273
Target Start/End: Complemental strand, 46827808 - 46827749
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcatta 273  Q
    |||||||||||||||||||||||||||| || |||||   ||||||||||| ||||||||    
T  46827808 aaggaaaatgttacatgaacaccctttaatcatacactctattgtacacccaatgcatta 46827749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 41327641 - 41327560
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||  |||||||||||||  ||||| |||||||||||  ||||| || ||| ||||| |||| ||||||||||    
T  41327641 aaaatgttacatagacaccctttattcacacaccccattgtacaccttatgcactacggacattttggtaaattcatctcac 41327560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 49229765 - 49229684
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatct 296  Q
    |||||||||||| ||||||| |||||| || ||||||  |||||||||  ||||||||| ||||||| | |||| |||||||    
T  49229765 aggaaaatgttatatgaacatcctttaatcatacaccctattgtacacttcatgcattaaggatattctggtaaattcatct 49229684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 275
Target Start/End: Original strand, 50526088 - 50526148
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagg 275  Q
    ||||||||||||||| ||||||||||||| ||| ||  | |||||||||||||||| ||||    
T  50526088 aggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactagg 50526148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 267
Target Start/End: Original strand, 30189272 - 30189324
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccat 267  Q
    |||||||||||||||||||||| |||||||  ||||  ||| |||||||||||    
T  30189272 aggaaaatgttacatgaacaccatttattcacacactccatcgtacaccccat 30189324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 216 - 299
Target Start/End: Original strand, 1750414 - 1750497
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||| |||||||||||||||    
T  1750414 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcac 1750497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 12302355 - 12302270
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||| ||| |||||||||||||| |||||||||||||||    
T  12302355 aaggaaaatgttacatgaacaccctttatttctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcac 12302270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 215 - 299
Target Start/End: Original strand, 30838631 - 30838715
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||||||||||| ||||| || ||||||||||||||| |||||||||||||| |||||||||||||||    
T  30838631 aggaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcac 30838715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 43335865 - 43335780
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||| ||||||| | |||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||    
T  43335865 aaggaaaatgttatatgaacatcatttattcctacacctcattgtacatcccatgtattagggatattttggtaagttcatctcac 43335780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 216 - 299
Target Start/End: Original strand, 16096747 - 16096830
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||| || |||| |||||||    
T  16096747 ggaaaatgttacatgaacaccctttattcctacaccccattatacaccccatgtattagggatattttggtgagttaatctcac 16096830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 213 - 295
Target Start/End: Original strand, 33229298 - 33229381
Alignment:
Q  213 gaaggaaaatgttacatgaacacccttt-attcctacacctcattgtacaccccatgcattagggatattttagtaagttcatc 295  Q
    |||| |||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  33229298 gaagaaaaatgatacatgaacacccttttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatc 33229381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 217 - 299
Target Start/End: Original strand, 19047158 - 19047240
Alignment:
Q  217 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||||||||   |||||||||||| ||| |||||||||||||| |||||||||||||||    
T  19047158 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcac 19047240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 43114555 - 43114640
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||| || ||||||  |||||||||||||||||||||||| ||||| |||| ||||||||||    
T  43114555 aaggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 43114640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 218 - 298
Target Start/End: Complemental strand, 43490499 - 43490419
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctca 298  Q
    |||||||||||||||||||||||||||||||| | |||||||||| | ||| |||||||||||||| ||||||||||||||    
T  43490499 aaaatgttacatgaacaccctttattcctacatcccattgtacactctatgtattagggatattttggtaagttcatctca 43490419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 216 - 299
Target Start/End: Complemental strand, 12415560 - 12415477
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||| ||||| |||| || |||||||    
T  12415560 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcac 12415477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 216 - 299
Target Start/End: Complemental strand, 12427620 - 12427537
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||| ||||| |||| || |||||||    
T  12427620 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcac 12427537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 11825752 - 11825671
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||| || ||||||  |||||||||||||||||||||||| ||||| |||| ||||||||||    
T  11825752 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 11825671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 217 - 299
Target Start/End: Complemental strand, 34817875 - 34817793
Alignment:
Q  217 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||| || | | ||||| |||| ||||||||||    
T  34817875 gaaaatgttacatgaacaccctttattcacacacctcattgtacaccccatgcactacgcacattttggtaaattcatctcac 34817793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 16803966 - 16804051
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||| || ||||||  |||||||| ||||||||||||||| |||||  ||| ||||||||||    
T  16803966 aaggaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcac 16804051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 16843248 - 16843333
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||| || ||||||  |||||||| ||||||||||||||| |||||  ||| ||||||||||    
T  16843248 aaggaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcac 16843333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 41282072 - 41281991
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||| || ||||||  |||||||||||||||||||||||| |||||  ||| ||||||||||    
T  41282072 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttgataatttcatctcac 41281991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 299
Target Start/End: Complemental strand, 13780835 - 13780752
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||| |||||  |||||||  ||||||||||||||||||||| |||||||||||||||  ||| ||||||||||    
T  13780835 ggaaaatgttacatcaacacattttattcacacacctcattgtacaccccatacattagggatattttgataaattcatctcac 13780752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 966936 - 966851
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||| || ||||||  |||||||||||||||||||| | |  |||| |||| ||||||||||    
T  966936 aaggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaagaacgttttggtaaattcatctcac 966851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 4764828 - 4764743
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||| |||||| ||||||||||||||  ||||||||||||||| ||||   ||||||| |||| ||||||||||    
T  4764828 aaggaaaatgttacatcaacaccatttattcctacaccctattgtacaccccatgtattataaatattttggtaaattcatctcac 4764743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 299
Target Start/End: Original strand, 18491704 - 18491788
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||||||||| || ||||||  |||||||||| ||||||||| | | ||||| |||| ||||||||||    
T  18491704 aggaaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcattaagaacattttggtaaattcatctcac 18491788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 6518566 - 6518486
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||| |||| || |||||   |||||||||||||||||||||||| ||||| |||| ||||||||||    
T  6518566 aaaatgttacatgaacacc-tttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcac 6518486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 34895843 - 34895758
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||| ||||||||||||||| |||| ||  |||||  |||||||||||||||||||||||| || || |||| ||||||||||    
T  34895843 aaggaaagtgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcac 34895758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 4299518 - 4299437
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||| |||||||||||||| || ||||||  ||||||||| ||||||||||  || ||||| |||| ||||||||||    
T  4299518 aaaatgttatatgaacaccctttaatcatacaccctattgtacactccatgcattaatgacattttggtaaattcatctcac 4299437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 8896681 - 8896600
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||  |||   |||||||||||| || || |||| ||||||| |||| ||||||||||    
T  8896681 aaaatgttacatgaacaccctttattcacacattccattgtacaccctatacaataggaatattttggtaaattcatctcac 8896600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 299
Target Start/End: Original strand, 42026766 - 42026852
Alignment:
Q  215 aggaaaatgttacatgaacaccc--tttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||  ||||||| ||||   ||||||||| |||  |||||||||||||||| | || ||||||||||    
T  42026766 aggaaaatgttacatgaacacccaatttattcatacattccattgtacatcccgcgcattagggatattttggcaaattcatctcac 42026852  T

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Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 251
Target Start/End: Complemental strand, 42849946 - 42849911
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacc 251  Q
    ||||||||||||||||||||||||||||||||||||    
T  42849946 ggaaaatgttacatgaacaccctttattcctacacc 42849911  T

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Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 4452012 - 4451967
Alignment:
Q  254 attgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||  |||||||||||||||||| |||| ||||||||||    
T  4452012 attgtacaccatatgcattagggatattttggtaaattcatctcac 4451967  T

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Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 7070418 - 7070459
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgta 259  Q
    ||||||||||||||||||||||||||| |||| | |||||||    
T  7070418 aaaatgttacatgaacaccctttattcatacatcccattgta 7070459  T

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Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 18033980 - 18034065
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||| ||| |||||||||||||| |||||||||||||||    
T  18033980 aaggaaaatgttacatgaacaccctttattcctacactccattgtacaccctatgtattagggatatttttgtaagttcatctcac 18034065  T

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Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 33801467 - 33801552
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||| |||||||| ||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||    
T  33801467 aaggaaaatgttacatgaacatcctttatttctacaccccattgtacactccatgtattagggatattttagtaagttcatctcac 33801552  T

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Target: chr5; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 216 - 299
Target Start/End: Complemental strand, 2614749 - 2614666
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||| |||||||||||||||    
T  2614749 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 2614666  T

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Target: chr5; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 216 - 299
Target Start/End: Original strand, 22512305 - 22512388
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||||||||||  |||||||||| ||||| |||||||||||||| |||||||||||||||    
T  22512305 ggaaaatgttacatgaacaccctttattcctacactccattgtacactccatgtattagggatattttggtaagttcatctcac 22512388  T

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Target: chr5; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 216 - 299
Target Start/End: Complemental strand, 41334763 - 41334680
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||| ||| |||||||||||||| |||||||||||||||    
T  41334763 ggaaaatgttacatgaacaccctttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcac 41334680  T

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Target: chr5; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 7617131 - 7617216
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||||||||||||| |||||  |||| ||||||||||| |||||||||||||| |||||||||||||||    
T  7617131 aaggaaaatgttacatgaacaccctttattcatacactccattatacaccccatgtattagggatattttggtaagttcatctcac 7617216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 216 - 299
Target Start/End: Complemental strand, 32473494 - 32473411
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||| || ||||||| |||||||||| ||||||||||||||||||| |||| ||||||||||    
T  32473494 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccacatgcattagggatattttggtaatttcatctcac 32473411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 216 - 291
Target Start/End: Complemental strand, 33855143 - 33855068
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagtt 291  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| | ||||| |||||||    
T  33855143 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattaggaacattttggtaagtt 33855068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 218 - 298
Target Start/End: Complemental strand, 25915085 - 25915006
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctca 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| | ||||||| ||| ||||||||||    
T  25915085 aaaatgttacatgaacaccctttattcctacacctcattgtacacccaatgtatta-gaatatttttgtaggttcatctca 25915006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 5256997 - 5257078
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||| |||||| ||||||| |||| | |||||||||||||||| |||||||||||||| |||| ||||||||||    
T  5256997 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcac 5257078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 215 - 299
Target Start/End: Original strand, 17208073 - 17208157
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||| ||||||||||||| || ||||| | |||||||||||||||||||| ||| ||||| |||| ||||||||||    
T  17208073 aggaaaatgttacgtgaacaccctttaatcatacactttattgtacaccccatgcattaaggacattttggtaaattcatctcac 17208157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 38470577 - 38470662
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||| |||||||||||||| ||||   |||||||||||||||| |||| ||||||||| |||| ||||| ||||    
T  38470577 aaggaaaatgttacataaacaccctttattcatacattccattgtacaccccatgtattaaggatattttggtaaattcatttcac 38470662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 30622820 - 30622736
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||| |||||| || ||||||  |||||| | ||||||||||| ||||||||| |||| || |||||||    
T  30622820 aaggaaaatgttacatgaacatcctttaatcatacaccctattgta-agcccatgcattaaggatattttggtaaatttatctcac 30622736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 299
Target Start/End: Complemental strand, 39122533 - 39122450
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||| | ||||||||||||| ||||||| |||| || |||  ||| |||||| |||||| ||||||| |||| ||||||||||    
T  39122533 aggaaactattacatgaacaccttttattcatacatctaattagaca-cccatgtattaggaatattttggtaaattcatctcac 39122450  T

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Target: scaffold0187 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 215 - 299
Target Start/End: Complemental strand, 14289 - 14205
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||| || ||| |||||||||||||| |||||||||||||||    
T  14289 aggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcac 14205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 215 - 299
Target Start/End: Complemental strand, 24617 - 24533
Alignment:
Q  215 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||| || ||| |||||||||||||| |||||||||||||||    
T  24617 aggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcac 24533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 217 - 299
Target Start/End: Original strand, 112656 - 112738
Alignment:
Q  217 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||||||||||||   |||||||||||| ||| |||||||||||||| |||||||||||||||    
T  112656 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcac 112738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 11249 - 11334
Alignment:
Q  214 aaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    ||||||||||| |||||||||| |||||||| |||||| |||||||||||||||  |||||||||||||| |||||||||||||||    
T  11249 aaggaaaatgtcacatgaacacactttattcatacaccccattgtacaccccatatattagggatattttggtaagttcatctcac 11334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 23521 - 23441
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatct 296  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||| |||||| ||||| |||||||| ||||||||||||    
T  23521 ggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatct 23441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 216 - 299
Target Start/End: Complemental strand, 35556 - 35473
Alignment:
Q  216 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||| |||||| |||| || ||||||  |||||||||||||||||||||||| || || |||| ||||||||||    
T  35556 ggaaaatgttacataaacaccatttaatcatacaccatattgtacaccccatgcattagggacatattggtaaattcatctcac 35473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 45817 - 45736
Alignment:
Q  218 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgcattagggatattttagtaagttcatctcac 299  Q
    |||||||||||||||||||||||| || ||||||  |||||||| || ||| |||| ||||||||| |||| ||||||||||    
T  45817 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcac 45736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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