View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18380_low_40 (Length: 260)
Name: NF18380_low_40
Description: NF18380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18380_low_40 |
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Alignment Details
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 11 - 244
Target Start/End: Original strand, 36917778 - 36918010
Alignment:
| Q |
11 |
gagtgagatgaaattcatacttaaaatagtaaatgtgtgaattaattatgattgagtggctaaaataaaagatttagtgaaactaattagcacatgtata |
110 |
Q |
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| T |
36917778 |
gagtgagatgaaattcttacttaaaatagtaaatgtgtgaattaattatgattgagtggctaaaataaa-gattttgtgaaactaattagcacatgtata |
36917876 |
T |
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| Q |
111 |
ttggtctagttctagggcacaacatgattgcaataaattaaagaatggggttagttttgttatgaaatgtcaacatctagttggggacagttaaatgatg |
210 |
Q |
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| T |
36917877 |
ttggtctagttctagggcacaacatgattgcaataaattaaagaatggggttagttttgttatgaaatgtcaacatctagttggggacagttaaatgatg |
36917976 |
T |
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| Q |
211 |
atgtgaagataataggctaattttgggtagtttt |
244 |
Q |
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| T |
36917977 |
atgtgaagataataggctaattttgggtagtttt |
36918010 |
T |
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