View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18380_low_51 (Length: 231)
Name: NF18380_low_51
Description: NF18380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18380_low_51 |
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Alignment Details
Target: chr1 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 6354937 - 6354794
Alignment:
| Q |
14 |
cacagaccaaccacaaggaaacaaggtgaaccgccccactgtccacaacaccaaacaatggtcaatcgcaggatacaatctcgtggattccacgaccatt |
113 |
Q |
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| T |
6354937 |
cacagaccaaccacaaggaaacaaggtgaaccgccccactgtccacaacaccaaacaatggtcaatcgcaggatacaatctcgtggattccacgaccatt |
6354838 |
T |
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| Q |
114 |
catagaacatacagggagagacagatggaacctgtacatagtcc |
157 |
Q |
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| T |
6354837 |
catagaacatacagggagaggcagatggaacttgtacatagtcc |
6354794 |
T |
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