View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18380_low_9 (Length: 485)
Name: NF18380_low_9
Description: NF18380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18380_low_9 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 410; Significance: 0; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 410; E-Value: 0
Query Start/End: Original strand, 18 - 469
Target Start/End: Original strand, 5559086 - 5559539
Alignment:
| Q |
18 |
caaacagcaacaacaacaaaatttatactactaacagcccaaaaacagagtcacatagaatcccaaagtcagtaacaacttatacatctaatcaatcaac |
117 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5559086 |
caaacagaaacaacaacaaaatttatactactaacagcccaaaaacagagtcatatagaatcccaaagtcagtaacaacttatacatctaatcaatcaac |
5559185 |
T |
|
| Q |
118 |
ataacttgaatttcttctcaaaataatcacttttacctcaatttaagctattaatcacttatacttacattcagcccctgcctcaatcttcttgccaagc |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5559186 |
ataacttgaatttcttctcaaaataatcacttttacctcaatttaagctattaatcacttatacttacattcagcccctgcctcaatcttcttgccaagc |
5559285 |
T |
|
| Q |
218 |
caaaccctagcttcaatattcttgtttcttgctcaagcttgcctctaatgctcaaaacacaacacaaaaatcacttttctacaacatgaaatgtcatttc |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5559286 |
caaaccctagcttcaatattcttgtttcttgctcaagcttgcctctaacgctcaaaacacaacacaaaaatcacttttctacaacatgaaatgtcatttc |
5559385 |
T |
|
| Q |
318 |
tagcttggttttgctacaaaagtgaaataggtaatggtgggagtgaaagaaaggaacacgtgagggagggggaagagagaagaaggaggttctga-tttt |
416 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||| |
|
|
| T |
5559386 |
tagcttggttttgctacaaaagtgaaataggtaatggtgggagtgaaagaaaggaacacgtgagggagagggaagagagaagagggaggttctgattttt |
5559485 |
T |
|
| Q |
417 |
tgtgagagaagagtgtagaagaatgtggaaa-attttagttttgttctatttgt |
469 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
5559486 |
tgtgagagaagagtgtagaagaatgtggaaattttttagttttattctatttgt |
5559539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 142
Target Start/End: Complemental strand, 25637348 - 25637223
Alignment:
| Q |
18 |
caaacagcaacaacaacaaaatttatactactaacagcccaaaa-acagagtca-catagaatcccaaagtcagtaacaacttatacatctaatcaatca |
115 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||| ||||||||| ||||||| | | ||||| |||||| || ||||| ||||| | | |||| ||||| |
|
|
| T |
25637348 |
caaacagcaacaacaacaacattgctactactaagagcccaaaatacagagttatctcagaat-ccaaaggcaataacagcttatgcttataattaatca |
25637250 |
T |
|
| Q |
116 |
acataacttgaatttcttctcaaaata |
142 |
Q |
| |
|
||||||||| ||||||||||||||||| |
|
|
| T |
25637249 |
acataacttaaatttcttctcaaaata |
25637223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 229
Target Start/End: Complemental strand, 34150049 - 34150019
Alignment:
| Q |
199 |
ctcaatcttcttgccaagccaaaccctagct |
229 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
34150049 |
ctcaatcttcttgccaagccaaaccctagct |
34150019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 273
Target Start/End: Complemental strand, 34150000 - 34149971
Alignment:
| Q |
244 |
tcttgctcaagcttgcctctaatgctcaaa |
273 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
34150000 |
tcttgctcaagcttgcctctaatgctcaaa |
34149971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 396; Significance: 0; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 31 - 469
Target Start/End: Complemental strand, 2694871 - 2694433
Alignment:
| Q |
31 |
caacaaaatttatactactaacagcccaaaaacagagtca-catagaatcccaaagtcagtaacaacttatacatctaatcaatcaacataacttgaatt |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2694871 |
caacaaaatttatactactaacagcccaaaaacagagttatcgcagaatcccaaagtcagtaacaacttatacatctaatcaatcaacataacttgaatt |
2694772 |
T |
|
| Q |
130 |
tcttctcaaaataatcacttttacctcaatttaagctattaatcacttatacttacattcagcccctgcctcaatcttcttgccaagccaaaccctagct |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2694771 |
tcttctcaaaataatcacttttacctcaatttaagctattaatcacttatacttacattcagcccctgcctcaatcttcttgccaagccaaaccctagct |
2694672 |
T |
|
| Q |
230 |
tcaatattcttgtttcttgctcaagcttgcctctaatgctcaaaacacaacacaaaaatcacttttctacaacatgaaatgtcatttctagcttggtttt |
329 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
2694671 |
tcaatattcttgtttcttgctcaagcttgcctctaatgctcaaaacacaacacaaaaatcacttttctacaacatgaaatgtcatttctagcttgatttt |
2694572 |
T |
|
| Q |
330 |
gctacaaaagtgaaataggtaatggtgggagtgaaagaaaggaacacgtgagggagggggaagagagaagaaggaggttctgatttttgtgagagaagag |
429 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
2694571 |
gctacaaaagtgaaataggtaatggtgggagtgaaagaaaggaacacctgagggagggggaagagagaagagggaggttctgatttttgtgagag-agag |
2694473 |
T |
|
| Q |
430 |
tgtagaagaatgtggaaaattttagttttgttctatttgt |
469 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
2694472 |
tgtagaaaaatgtggaaaattttagttttgttctatttgt |
2694433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 20 - 229
Target Start/End: Complemental strand, 31330798 - 31330575
Alignment:
| Q |
20 |
aacagcaacaacaacaaaatttatactactaacagcccaaaaacagagtca-catagaatcccaaagtcagtaacaacttatacatctaatcaatcaaca |
118 |
Q |
| |
|
||||||||||||| ||||||| ||||||||||||||||||||||||||||| || ||||| ||||| | ||||| ||||||| |||||| |||||||| |
|
|
| T |
31330798 |
aacagcaacaacagcaaaattgatactactaacagcccaaaaacagagtcatcacagaatgccaaatgaaataacagcttatacttctaatgaatcaaca |
31330699 |
T |
|
| Q |
119 |
taacttgaatttcttctcaaaataatcacttttacctcaatttaagctattaatcacttatacttacat-------------tcagcccctgcctcaatc |
205 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
31330698 |
taacttaaatttcttctcaaaataatcacttttacctcaatttaagctattaatcacttatacttacattcagtttcaacattcagcccctgcctctatc |
31330599 |
T |
|
| Q |
206 |
ttcttgccaagccaaaccctagct |
229 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
31330598 |
ttcttgccaagccaaaccctagct |
31330575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 20 - 229
Target Start/End: Complemental strand, 31337519 - 31337296
Alignment:
| Q |
20 |
aacagcaacaacaacaaaatttatactactaacagcccaaaaacagagtca-catagaatcccaaagtcagtaacaacttatacatctaatcaatcaaca |
118 |
Q |
| |
|
||||||||||||| ||||||| ||||||||||||||||||||||||||||| || ||||| ||||| | ||||| ||||||| |||||| |||||||| |
|
|
| T |
31337519 |
aacagcaacaacagcaaaattgatactactaacagcccaaaaacagagtcatcacagaatgccaaatgaaataacagcttatacttctaatgaatcaaca |
31337420 |
T |
|
| Q |
119 |
taacttgaatttcttctcaaaataatcacttttacctcaatttaagctattaatcacttatacttacat-------------tcagcccctgcctcaatc |
205 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
31337419 |
taacttaaatttcttctcaaaataatcacttttacctcaatttaagctattaatcacttatacttacattcagtttcaacattcagcccctgcctctatc |
31337320 |
T |
|
| Q |
206 |
ttcttgccaagccaaaccctagct |
229 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
31337319 |
ttcttgccaagccaaaccctagct |
31337296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 244 - 281
Target Start/End: Original strand, 31316315 - 31316352
Alignment:
| Q |
244 |
tcttgctcaagcttgcctctaatgctcaaaacacaaca |
281 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
31316315 |
tcttgctcaaacttgcctctaatgctcaaaacacaaca |
31316352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 164
Target Start/End: Complemental strand, 8032283 - 8032255
Alignment:
| Q |
136 |
caaaataatcacttttacctcaatttaag |
164 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
8032283 |
caaaataatcacttttacctcaatttaag |
8032255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 394; Significance: 0; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 18 - 454
Target Start/End: Complemental strand, 37367858 - 37367421
Alignment:
| Q |
18 |
caaacagcaacaacaacaaaatttatactactaacagcccaaaaacagagtca-catagaatcccaaagtcagtaacaacttatacatctaatcaatcaa |
116 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37367858 |
caaacagcaacaacgacaaaatttatactactaacagcccaaaaacagattcatcatagaatcccaaagtcagtaacaacttatacatctaatcaatcaa |
37367759 |
T |
|
| Q |
117 |
cataacttgaatttcttctcaaaataatcacttttacctcaatttaagctattaatcacttatacttacattcagcccctgcctcaatcttcttgccaag |
216 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37367758 |
cataacttgaattgcttctcaaaataatcacttttacctcaatttaagctattaatcacttatacttacattcagcccctgcctcaatcttcttgccaag |
37367659 |
T |
|
| Q |
217 |
ccaaaccctagcttcaatattcttgtttcttgctcaagcttgcctctaatgctcaaaacacaacacaaaaatcacttttctacaacatgaaatgtcattt |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
37367658 |
ccaaaccctagcttcaatattcttgtttcttgctcaagcttgcctctaatgctcaaaacacaacacaaaaatcacttttctacaacttgaaatgtcattt |
37367559 |
T |
|
| Q |
317 |
ctagcttggttttgctacaaaagtgaaataggtaatggtgggagtgaaagaaaggaacacgtgagggagggggaagagagaagaaggaggttctgatttt |
416 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||| |
|
|
| T |
37367558 |
ctagcttgattttgctacaaaagtgaaataggtaatggtgggagtgaaagaaaggaacacgtgagagagggggaagagagaagagggatgttctgatttt |
37367459 |
T |
|
| Q |
417 |
tgtgagagaagagtgtagaagaatgtggaaaattttag |
454 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
37367458 |
tgtgagagaagagtgtagaaaaatgtggaaaattttag |
37367421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 18 - 469
Target Start/End: Original strand, 41529715 - 41530174
Alignment:
| Q |
18 |
caaacagcaacaacaacaaaatttatactactaacagcccaaaaacagagtcacatagaatcccaaagtcagtaacaacttatacatctaatcaatcaac |
117 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41529715 |
caaacagaaacaacaacaaaatttatactactaacagcccaaaaacagagtcatatagaatcccaaagtcagtaacaacttatacatctaatcaatcaac |
41529814 |
T |
|
| Q |
118 |
ataacttgaatttcttctcaaaataatcacttttacctcaatttaagctattaatcacttatacttacattcagcccctgcctcaatcttcttgccaagc |
217 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41529815 |
ataacttgaatttcttcccaaaataatcacttttacctcaatttaagctattaatcacttatacttacattcagcccctgcctcaatcttcttgccaagc |
41529914 |
T |
|
| Q |
218 |
caaaccctagcttcaatattcttgtttcttgctcaagcttgcctctaatgctcaaaacacaacacaaaaatcacttttctacaacatgaaatgtcatttc |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41529915 |
caaaccctagcttcaatattcttgtttcttgctcaagcttgcctctaacgctcaaaacacaacacaaaaatcacttttctacaacatgaaatgtcatttc |
41530014 |
T |
|
| Q |
318 |
tagcttggttttgctacaaaagtgaaataggtaatggtgggagtgaaagaaaggaacacgtgag---ggagggggaagagagaagaaggaggttctga-- |
412 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
41530015 |
tagcttggttttgctacaaaagtgaaataggtaatggtgggagtgaaagaaaggaacacgtgagggaggagggggaagagagaagagggaggttctgatt |
41530114 |
T |
|
| Q |
413 |
--tttttgtgagagaagagtgtagaagaatgtggaaa-attttagttttgttctatttgt |
469 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
41530115 |
tttttttgtgagagaagagtgtagaagaatgtggaaattttttagttttattctatttgt |
41530174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 391; Significance: 0; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 31 - 469
Target Start/End: Complemental strand, 19358097 - 19357655
Alignment:
| Q |
31 |
caacaaaatttatactactaacagcccaaaaacagagtcacatagaatcccaaagtcagtaacaacttatacatctaatcaatcaacataacttgaattt |
130 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19358097 |
caacaaaatttatactactaacagcccaaaaacagagtcatatagaatcccaaagtcagtaacaacttatacatctaatcaatcaacataacttgaattt |
19357998 |
T |
|
| Q |
131 |
cttctcaaaataatcacttttacctcaatttaagctattaatcacttatacttacattcagcccctgcctcaatcttcttgccaagccaaaccctagctt |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19357997 |
cttctcaaaataatcacttttacctcaatttaagctattaatcacttatacttacattcagcccctgcctcaatcttcttgccaagccaaaccctagctt |
19357898 |
T |
|
| Q |
231 |
caatattcttgtttcttgctcaagcttgcctctaatgctcaaaacacaacacaaaaatcacttttctacaacatgaaatgtcatttctagcttggttttg |
330 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19357897 |
caatattcttgtttcttgctcaagcttgcctctaacgctcaaaacacaacacaaaaatcacttttctacaacatgaaatgtcatttctagcttggttttg |
19357798 |
T |
|
| Q |
331 |
ctacaaaagtgaaataggtaatggtgggagtgaaagaaaggaacacgtgagggagggggaagagagaagaaggaggttctga--tttttgtgagagaaga |
428 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
19357797 |
ctacaaaagtgaaataggtaat-gtgggagtgaaagaaaggaacacgtgagggagggggaagagagaagagggaggttctgatttttttgtgagagaaga |
19357699 |
T |
|
| Q |
429 |
gtgtagaagaatgtggaaa---attttagttttgttctatttgt |
469 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
19357698 |
gtgtagaagaatgtggaaattttttttagttttattctatttgt |
19357655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 244 - 281
Target Start/End: Original strand, 18112765 - 18112802
Alignment:
| Q |
244 |
tcttgctcaagcttgcctctaatgctcaaaacacaaca |
281 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
18112765 |
tcttgctcaaacttgcctctaatgctcaaaacacaaca |
18112802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 90; Significance: 3e-43; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 160 - 285
Target Start/End: Complemental strand, 34455350 - 34455225
Alignment:
| Q |
160 |
ttaagctattaatcacttatacttacattcagcccctgcctcaatcttcttgccaagccaaaccctagcttcaatattcttgtttcttgctcaagcttgc |
259 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
34455350 |
ttaagctatgaatcacttatacttacagtcagcccttgcttcaatcttcttgccaagccaaaccctagcttcaatatccttgtttcttgctcaagcttat |
34455251 |
T |
|
| Q |
260 |
ctctaatgctcaaaacacaacacaaa |
285 |
Q |
| |
|
|||||||||| |||||||||||||| |
|
|
| T |
34455250 |
ctctaatgcttcaaacacaacacaaa |
34455225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 4342578 - 4342727
Alignment:
| Q |
18 |
caaacagcaacaacaacaaaatttatactactaacagcccaaaa-acagagtca-catagaatcccaaagtcagtaacaacttatacatctaatcaatca |
115 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||||||||||||| ||||||| | | ||||| |||||| || ||||| ||||| | | |||| ||||| |
|
|
| T |
4342578 |
caaacagcaacaacaacaacattgctactactaacagcccaaaatacagagttatctcagaat-ccaaaggcaataacagcttatgcttataattaatca |
4342676 |
T |
|
| Q |
116 |
acataacttgaatttcttctcaaaataatcacttttacctcaatttaagct |
166 |
Q |
| |
|
||||||||| |||||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
4342677 |
acataacttaaatttcttctcaaaataagcacttttacctcaattttagct |
4342727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 3077524 - 3077439
Alignment:
| Q |
81 |
caaagtcagtaacaacttatacatctaatcaatcaacataacttgaatttcttctcaaaataatcacttttacctcaatttaagct |
166 |
Q |
| |
|
||||| || ||||||||||| | |||||||| |||||||||||| || | |||||||||||||| |||||||||| ||| |||| |
|
|
| T |
3077524 |
caaaggcaataacaacttatgcttctaatcattcaacataacttaaactatatctcaaaataatcatttttacctcacttttagct |
3077439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 31662744 - 31662699
Alignment:
| Q |
184 |
acattcagcccctgcctcaatcttcttgccaagccaaaccctagct |
229 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
31662744 |
acattcagcccctgcctctatcttcttgccaagccaaaccctagct |
31662699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University