View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18381_low_15 (Length: 268)
Name: NF18381_low_15
Description: NF18381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18381_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 27889433 - 27889192
Alignment:
| Q |
18 |
ataattacatgttcaatttaattcttaaagcatacagtaaatagttttgacattgtataaaatttgttgatttattttgttgttgttgagggaataaaat |
117 |
Q |
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| T |
27889433 |
ataattacatgttcaatttaattcttaaaacatacagtaaatagttttgacattgtataaaatttgttgatttattttgttgttgttgagggaataaaat |
27889334 |
T |
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| Q |
118 |
atgttgatgtattttctgtttgcaactatatttataaattttcatatattttgaagattaaattgatgaatttttcttcatatcttaactaaat-tattg |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||| |
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| T |
27889333 |
atgttgatgtattttctgtttgcaactatatttataaattttcatatattttgaagattaaattgatgaatttttcttcatatcttccttaactaaattg |
27889234 |
T |
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| Q |
217 |
atgatttaggctttagaaaaagtgtctttgaggatgatgatg |
258 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
27889233 |
atgatttaggctttagaaaaagtgtctttgaggatgatgatg |
27889192 |
T |
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