View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18382_low_5 (Length: 279)
Name: NF18382_low_5
Description: NF18382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18382_low_5 |
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Alignment Details
Target: chr1 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 16 - 270
Target Start/End: Original strand, 46872867 - 46873121
Alignment:
| Q |
16 |
ctcatacccaatagttctttaaccaaattctcatcttcaaaacccaacaatgttatcaataacatcactccaatttccattgattcttccattttctcca |
115 |
Q |
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| T |
46872867 |
ctcatacccaatagttctttaaccaaattctcatcttcaaaacccaacaatgttaacaataacatcactccaatttccattgattcttccattttctcca |
46872966 |
T |
|
| Q |
116 |
cacccgaaaacagttctgacggtgtaatagcgccgtctactcctgttatcaagtcaagtgctaaatcaaatcatgttgttcagagaattgaaagaaagaa |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46872967 |
cacccgaaaacagttctgacggtgtaatagcgccgtctactcctgttatcaagtcaagtgctaaatcaaatcatgttgttcagagaattgaaagaaagaa |
46873066 |
T |
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| Q |
216 |
aaagggtgaaaagaggtgtttttactctggtttaggtttattgaagatgatgatg |
270 |
Q |
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| T |
46873067 |
aaagggtgaaaagaggtgtttttactctggtttaggtttattgaagatgatgatg |
46873121 |
T |
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