View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18382_low_6 (Length: 212)

Name: NF18382_low_6
Description: NF18382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18382_low_6
NF18382_low_6
[»] chr4 (21 HSPs)
chr4 (18-131)||(22527818-22527931)
chr4 (128-182)||(22528647-22528701)
chr4 (18-68)||(1832228-1832278)
chr4 (18-65)||(20828317-20828364)
chr4 (18-68)||(18447614-18447664)
chr4 (24-68)||(9849882-9849926)
chr4 (28-68)||(19547226-19547266)
chr4 (24-68)||(25118042-25118086)
chr4 (19-58)||(16669906-16669945)
chr4 (24-67)||(19335386-19335429)
chr4 (22-68)||(4616942-4616988)
chr4 (18-68)||(7613608-7613658)
chr4 (22-68)||(11252303-11252349)
chr4 (30-68)||(17661834-17661872)
chr4 (22-68)||(17711182-17711228)
chr4 (19-68)||(12836241-12836290)
chr4 (22-67)||(14573325-14573370)
chr4 (19-67)||(9053879-9053927)
chr4 (18-68)||(15046727-15046774)
chr4 (18-68)||(15107650-15107697)
chr4 (28-68)||(25024989-25025029)
[»] chr6 (19 HSPs)
chr6 (18-68)||(21079895-21079945)
chr6 (18-68)||(27961086-27961136)
chr6 (18-67)||(9339153-9339202)
chr6 (18-67)||(10505043-10505092)
chr6 (19-68)||(30356136-30356185)
chr6 (24-68)||(20404185-20404229)
chr6 (18-68)||(3358015-3358065)
chr6 (18-68)||(32759841-32759891)
chr6 (19-68)||(10822110-10822158)
chr6 (26-67)||(20723481-20723522)
chr6 (24-67)||(9848041-9848084)
chr6 (18-67)||(15600589-15600639)
chr6 (18-68)||(21060578-21060628)
chr6 (30-67)||(11136800-11136837)
chr6 (22-67)||(17822201-17822246)
chr6 (22-59)||(18171436-18171473)
chr6 (22-67)||(22411580-22411625)
chr6 (18-65)||(22564727-22564775)
chr6 (27-67)||(23644493-23644533)
[»] chr8 (23 HSPs)
chr8 (18-67)||(17980665-17980714)
chr8 (20-68)||(28904142-28904190)
chr8 (18-65)||(22501706-22501753)
chr8 (18-68)||(14076995-14077045)
chr8 (21-67)||(24381502-24381548)
chr8 (18-65)||(14271713-14271760)
chr8 (22-68)||(24851119-24851165)
chr8 (18-68)||(30487718-30487768)
chr8 (22-67)||(24583347-24583392)
chr8 (24-67)||(19784956-19784999)
chr8 (18-65)||(30117836-30117883)
chr8 (18-68)||(17835416-17835466)
chr8 (22-68)||(26829641-26829687)
chr8 (18-68)||(35861636-35861686)
chr8 (18-67)||(15058679-15058728)
chr8 (22-67)||(15176607-15176652)
chr8 (27-68)||(17649683-17649724)
chr8 (27-68)||(17976119-17976160)
chr8 (22-67)||(24388547-24388592)
chr8 (22-67)||(26139664-26139709)
chr8 (18-67)||(28858708-28858757)
chr8 (22-67)||(29765568-29765613)
chr8 (22-67)||(30832815-30832860)
[»] chr3 (20 HSPs)
chr3 (19-68)||(20886742-20886791)
chr3 (17-68)||(3002928-3002979)
chr3 (19-67)||(27853090-27853138)
chr3 (18-65)||(5509941-5509988)
chr3 (18-68)||(28326308-28326358)
chr3 (18-67)||(23054752-23054801)
chr3 (19-68)||(26092777-26092826)
chr3 (22-67)||(31284080-31284125)
chr3 (18-65)||(19388028-19388075)
chr3 (28-67)||(34276615-34276654)
chr3 (19-65)||(3114887-3114933)
chr3 (22-68)||(8881575-8881621)
chr3 (22-68)||(19169931-19169977)
chr3 (18-67)||(7208394-7208443)
chr3 (22-67)||(8115460-8115505)
chr3 (22-67)||(19912455-19912500)
chr3 (22-67)||(20021993-20022038)
chr3 (22-67)||(22246873-22246918)
chr3 (18-67)||(23637484-23637533)
chr3 (22-67)||(27073828-27073873)
[»] chr1 (14 HSPs)
chr1 (24-68)||(27911943-27911987)
chr1 (30-68)||(13134257-13134295)
chr1 (18-68)||(14235459-14235509)
chr1 (19-65)||(22626332-22626378)
chr1 (22-67)||(22621668-22621713)
chr1 (24-67)||(7881673-7881716)
chr1 (18-65)||(15811623-15811670)
chr1 (24-67)||(21848504-21848547)
chr1 (18-65)||(35133756-35133803)
chr1 (18-68)||(17017007-17017057)
chr1 (22-68)||(21333242-21333288)
chr1 (22-67)||(18734761-18734806)
chr1 (22-67)||(22507550-22507595)
chr1 (22-67)||(26101736-26101781)
[»] chr7 (21 HSPs)
chr7 (18-68)||(5047008-5047058)
chr7 (18-68)||(20175966-20176016)
chr7 (18-67)||(1732543-1732592)
chr7 (18-67)||(10332276-10332325)
chr7 (18-67)||(10418429-10418478)
chr7 (18-68)||(2506985-2507035)
chr7 (19-68)||(1254870-1254919)
chr7 (18-65)||(1586065-1586112)
chr7 (20-63)||(15170943-15170986)
chr7 (18-68)||(2505715-2505765)
chr7 (22-68)||(5237041-5237087)
chr7 (18-67)||(6039473-6039522)
chr7 (22-67)||(18986920-18986965)
chr7 (22-67)||(19001548-19001593)
chr7 (22-67)||(21502730-21502775)
chr7 (19-68)||(24751372-24751421)
chr7 (18-58)||(5221153-5221193)
chr7 (24-60)||(5471913-5471949)
chr7 (18-65)||(19154708-19154756)
chr7 (28-68)||(20577386-20577426)
chr7 (18-65)||(20754107-20754155)
[»] chr5 (15 HSPs)
chr5 (15-67)||(15520843-15520896)
chr5 (18-65)||(18832094-18832141)
chr5 (18-65)||(18939392-18939439)
chr5 (22-69)||(24658473-24658520)
chr5 (18-68)||(18227484-18227534)
chr5 (18-68)||(28254763-28254813)
chr5 (26-68)||(28280162-28280204)
chr5 (19-68)||(17336500-17336549)
chr5 (31-68)||(26253354-26253391)
chr5 (18-67)||(31600251-31600300)
chr5 (22-68)||(16522079-16522125)
chr5 (18-68)||(26348314-26348364)
chr5 (18-67)||(17469734-17469783)
chr5 (22-67)||(19003941-19003986)
chr5 (19-67)||(32416006-32416054)
[»] chr2 (20 HSPs)
chr2 (15-66)||(18970949-18971000)
chr2 (18-68)||(32141566-32141616)
chr2 (18-67)||(8445649-8445698)
chr2 (19-68)||(22627258-22627307)
chr2 (19-68)||(26651810-26651859)
chr2 (19-68)||(27871158-27871207)
chr2 (18-67)||(29717531-29717580)
chr2 (22-67)||(34579949-34579994)
chr2 (22-67)||(34585698-34585743)
chr2 (19-59)||(32140694-32140734)
chr2 (18-68)||(8501685-8501735)
chr2 (22-68)||(24086481-24086527)
chr2 (22-68)||(25537432-25537478)
chr2 (22-68)||(25922481-25922527)
chr2 (22-68)||(32138088-32138134)
chr2 (22-67)||(21905602-21905647)
chr2 (22-67)||(25196487-25196532)
chr2 (22-67)||(27907698-27907743)
chr2 (19-68)||(32130875-32130924)
chr2 (28-68)||(28930156-28930196)
[»] scaffold0043 (1 HSPs)
scaffold0043 (18-65)||(88614-88661)
[»] scaffold0015 (1 HSPs)
scaffold0015 (22-65)||(202010-202053)
[»] scaffold0002 (1 HSPs)
scaffold0002 (21-67)||(95499-95545)
[»] scaffold0441 (1 HSPs)
scaffold0441 (22-67)||(2141-2186)
[»] scaffold0072 (1 HSPs)
scaffold0072 (19-68)||(38164-38213)
[»] scaffold0005 (1 HSPs)
scaffold0005 (22-67)||(244006-244051)


Alignment Details
Target: chr4 (Bit Score: 106; Significance: 3e-53; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 22527818 - 22527931
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaactaaaatctcagttttttcccgtgtggatttctcaaagaagaatgagacg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22527818 gatgtcttgctttgccgatttgcatgattttttcatgaattacaacaaaactaaaatcttagttttttcccgtgtggatttctcaaagaagaatgagacg 22527917  T
Q  118 atatccatggcagg 131  Q
    ||||||||||||||    
T  22527918 atatccatggcagg 22527931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 22528647 - 22528701
Alignment:
Q  128 caggtgtggacatccggacagaggtttggtagcgtctgatctcaaaatctaattc 182  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  22528647 caggtgtggacattcgggcagaggtttggtagcgtctgatctcaaaatctaattc 22528701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 1832278 - 1832228
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  1832278 gatgtattgctttgccgatttgcatgattttttcgtgaattacatcaaaac 1832228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 20828364 - 20828317
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaa 65  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||    
T  20828364 gatgtcttgctttgccgatttgcatgatttcttcgtgaattacatcaa 20828317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 18447664 - 18447614
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||||||||||| |||||||||||||||| ||| |||||||||| |||||    
T  18447664 gatgtcttgcttttccgatttgcatgatttgttcgtgaattacattaaaac 18447614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 9849926 - 9849882
Alignment:
Q  24 ttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||||||||||||||||||||| ||| |||||||||| |||||    
T  9849926 ttgctttgccgatttgcatgatttcttcgtgaattacataaaaac 9849882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 19547266 - 19547226
Alignment:
Q  28 tttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||||||||||||||||| ||| ||||||||||||||||    
T  19547266 tttgccgatttgcatgatttcttcttgaattacatcaaaac 19547226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 25118086 - 25118042
Alignment:
Q  24 ttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||||    
T  25118086 ttgctttgtcgatttgcatgatttcttcttgaattacatcaaaac 25118042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 16669945 - 16669906
Alignment:
Q  19 atgtcttgctttgccgatttgcatgattttttcatgaatt 58  Q
    |||||||||||||||||| |||||||||||||| ||||||    
T  16669945 atgtcttgctttgccgatatgcatgattttttcgtgaatt 16669906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 19335429 - 19335386
Alignment:
Q  24 ttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||||| |||||||||||||||| ||| |||||||||||||||    
T  19335429 ttgctttaccgatttgcatgatttcttcttgaattacatcaaaa 19335386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 4616942 - 4616988
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||| |||||||||||||||||||| ||| |||||||| |||||||    
T  4616942 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaac 4616988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 7613608 - 7613658
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||| |||||||||||||||||||||||| ||| ||||| || |||||||    
T  7613608 gatgttttgctttgccgatttgcatgatttcttcttgaatcacgtcaaaac 7613658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 11252349 - 11252303
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||| |||||||||||||||||||| ||| |||||||| |||||||    
T  11252349 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaac 11252303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 68
Target Start/End: Original strand, 17661834 - 17661872
Alignment:
Q  30 tgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  17661834 tgccgatttgcatgatttcttcttgaattacatcaaaac 17661872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 17711182 - 17711228
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||| |||||||||||||||||||| ||| |||||||| |||||||    
T  17711182 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaac 17711228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 12836290 - 12836241
Alignment:
Q  19 atgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||||||||||||||| |||||||||| || |||||||| | ||||||    
T  12836290 atgtcttgctttgccgatatgcatgatttctttatgaattagaacaaaac 12836241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 14573325 - 14573370
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    |||||||||| ||||||||||||||| ||  |||||||||||||||    
T  14573325 tcttgctttgacgatttgcatgatttctttgtgaattacatcaaaa 14573370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 9053879 - 9053927
Alignment:
Q  19 atgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||||| |||||| |||||||||||||| ||| || ||||||||||||    
T  9053879 atgtcttactttgctgatttgcatgatttcttcgtgcattacatcaaaa 9053927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 15046774 - 15046727
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||||||||||||||||||||   |||| ||| ||||||||||||||||    
T  15046774 gatgtcttgctttgccgatttgc---atttcttcctgaattacatcaaaac 15046727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 15107650 - 15107697
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||||||||||||||||||||   |||| ||| ||||||||||||||||    
T  15107650 gatgtcttgctttgccgatttgc---atttcttcctgaattacatcaaaac 15107697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 25024989 - 25025029
Alignment:
Q  28 tttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||||||||||||||||| ||| |||||||||| |||||    
T  25024989 tttgccgatttgcatgatttcttcgtgaattacataaaaac 25025029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 21079945 - 21079895
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  21079945 gatgtcttgctttgccgatttgcatgatttcttcttgaattacatcaaaac 21079895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 27961086 - 27961136
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||||| ||||||||||||||||||||| ||| ||||||||||||||||    
T  27961086 gatgtctttctttgccgatttgcatgatttcttcgtgaattacatcaaaac 27961136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 9339202 - 9339153
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||||||||||||| |||||| ||||||| |||||||||||||||||||    
T  9339202 gatgtcttgctttgcagatttgaatgatttcttcatgaattacatcaaaa 9339153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 10505043 - 10505092
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||||||||    
T  10505043 gatgtcttgttttgccgatttgcatgatttcttcgtgaattacatcaaaa 10505092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 30356136 - 30356185
Alignment:
Q  19 atgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||||||||||||||||||||||||||| | | ||||||||||||||||    
T  30356136 atgtcttgctttgccgatttgcatgatttctccgtgaattacatcaaaac 30356185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 20404229 - 20404185
Alignment:
Q  24 ttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||    
T  20404229 ttgctttgccgatttgcatgatttcttcgtgaattacatcaaaac 20404185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 3358015 - 3358065
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||||| ||||||||||||||||||||| |||| ||||||| |||||||    
T  3358015 gatgtctttctttgccgatttgcatgatttcttcacgaattacgtcaaaac 3358065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 32759841 - 32759891
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||||| | ||||||||||||||||||| ||| ||||||||||||||||    
T  32759841 gatgtcttacattgccgatttgcatgatttcttcgtgaattacatcaaaac 32759891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 10822110 - 10822158
Alignment:
Q  19 atgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||||||||||||||||||||||||||| ||| | ||||||||||||||    
T  10822110 atgtcttgctttgccgatttgcatgatttcttcgt-aattacatcaaaac 10822158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 20723481 - 20723522
Alignment:
Q  26 gctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||||||||||||||||||||| || |||||||||||||||    
T  20723481 gctttgccgatttgcatgattttatcttgaattacatcaaaa 20723522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 9848041 - 9848084
Alignment:
Q  24 ttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||||||||||| |||||||||||||| |||||||| ||||||    
T  9848041 ttgctttgccgatatgcatgattttttcgtgaattacttcaaaa 9848084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 15600639 - 15600589
Alignment:
Q  18 gatgtcttgctttgcc-gatttgcatgattttttcatgaattacatcaaaa 67  Q
    |||||||||||||||| ||||||||| |||| ||| |||||||||||||||    
T  15600639 gatgtcttgctttgcctgatttgcataatttcttcgtgaattacatcaaaa 15600589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 21060628 - 21060578
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||||||||||| || |||| |||||||| ||| ||||||||||||||||    
T  21060628 gatgtcttgctttcccaatttacatgatttcttcttgaattacatcaaaac 21060578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 11136800 - 11136837
Alignment:
Q  30 tgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  11136800 tgccgatttgcatgatttattcatgaattacttcaaaa 11136837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 17822246 - 17822201
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||| |||||||||||||||||||| ||| |||||||| ||||||    
T  17822246 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaa 17822201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 18171473 - 18171436
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaatta 59  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  18171473 tcttgatttgccgatttgcatgatttcttcatgaatta 18171436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 22411625 - 22411580
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||| |||||||||||||||||||| ||| |||||||| ||||||    
T  22411625 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaa 22411580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 22564775 - 22564727
Alignment:
Q  18 gatgtctt-gctttgccgatttgcatgattttttcatgaattacatcaa 65  Q
    |||||||| |||||| ||||||||||||||| ||| |||||||||||||    
T  22564775 gatgtcttagctttgtcgatttgcatgatttcttcgtgaattacatcaa 22564727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 23644533 - 23644493
Alignment:
Q  27 ctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    |||||| |||||||||||||| ||| |||||||||||||||    
T  23644533 ctttgcggatttgcatgatttcttcgtgaattacatcaaaa 23644493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 17980665 - 17980714
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  17980665 gatgtcttgatttgccgatttgcatgattttttcgtgaattacatcaaaa 17980714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 28904190 - 28904142
Alignment:
Q  20 tgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  28904190 tgtcttgctttgccgatttgcatgatttgttcgtgaattacatcaaaac 28904142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 22501706 - 22501753
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaa 65  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||    
T  22501706 gatgtcttgctttgccgatttgcatgatttattcgtgaattacatcaa 22501753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 14076995 - 14077045
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||||||| ||| ||||||||||||||| ||||||||||||||||||||    
T  14076995 gatgtcttgcattgtcgatttgcatgatttcttcatgaattacatcaaaac 14077045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 24381548 - 24381502
Alignment:
Q  21 gtcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||    
T  24381548 gtcttgctttgccgatttgcatgatttcttcgtgaattacatcaaaa 24381502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 14271713 - 14271760
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaa 65  Q
    |||||||||||||||| ||||||||||||| ||| |||||||||||||    
T  14271713 gatgtcttgctttgccaatttgcatgatttcttcgtgaattacatcaa 14271760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 24851165 - 24851119
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||    
T  24851165 tcttgctttgccgatttgcatgatttatttgtgaattacatcaaaac 24851119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 30487718 - 30487768
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||| ||||||    
T  30487718 gatgtcttgttttgccgatatgcatgattttttcgtgaattacaacaaaac 30487768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 24583392 - 24583347
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||| |||||||||||||||||||||||| |||||||| ||||||    
T  24583392 tcttgatttgccgatttgcatgattttttcgtgaattacttcaaaa 24583347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 19784999 - 19784956
Alignment:
Q  24 ttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    |||||||| ||||||||||||||| ||| |||||||||||||||    
T  19784999 ttgctttgtcgatttgcatgatttcttcgtgaattacatcaaaa 19784956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 30117883 - 30117836
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaa 65  Q
    |||||||||||||||| ||||||||||||| ||| |||||||| ||||    
T  30117883 gatgtcttgctttgccaatttgcatgatttcttcgtgaattacctcaa 30117836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 17835416 - 17835466
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||||||||||| | ||| |||||||||||||| ||||||||| ||||||    
T  17835416 gatgtcttgctttactgatatgcatgattttttcgtgaattacaacaaaac 17835466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 26829687 - 26829641
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||||||||||||||||||||||| ||| |||||||  |||||||    
T  26829687 tcttgctttgccgatttgcatgatttcttcgtgaattatttcaaaac 26829641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 35861686 - 35861636
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||| ||| |||||||||||||||||||| ||  ||||||||||||||||    
T  35861686 gatgttttgttttgccgatttgcatgatttctttgtgaattacatcaaaac 35861636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 15058728 - 15058679
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||||||||||||| ||| | |||||||| ||||||||||||| |||||    
T  15058728 gatgtcttgctttgctgatatacatgatttcttcatgaattacaacaaaa 15058679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 15176652 - 15176607
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||| |||||||||||||||||||| ||| |||||||| ||||||    
T  15176652 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaa 15176607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 17649683 - 17649724
Alignment:
Q  27 ctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||||||||||||||||||| ||| | ||||||||||||||    
T  17649683 ctttgccgatttgcatgatttcttcgtaaattacatcaaaac 17649724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 17976119 - 17976160
Alignment:
Q  27 ctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||||||||||||||||||| ||  ||||||||||||||||    
T  17976119 ctttgccgatttgcatgatttcttattgaattacatcaaaac 17976160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 24388592 - 24388547
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||| |||||||||||||||||||| ||| |||||||| ||||||    
T  24388592 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaa 24388547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 26139664 - 26139709
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||| |||||||||||||||||||| ||| |||||||| ||||||    
T  26139664 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaa 26139709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 28858708 - 28858757
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||||||| ||||||||| || ||||||| ||| |||||||||||||||    
T  28858708 gatgtcttgatttgccgatctgtatgatttcttcgtgaattacatcaaaa 28858757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 29765613 - 29765568
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||| |||||||||||||||||||| ||| |||||||| ||||||    
T  29765613 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaa 29765568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 30832815 - 30832860
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||| |||||||||||||||||||| ||| |||||||| ||||||    
T  30832815 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaa 30832860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 20886742 - 20886791
Alignment:
Q  19 atgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  20886742 atgtcttgctttgccgatttgcatgatttcttcgtgaattacatcaaaac 20886791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 3002928 - 3002979
Alignment:
Q  17 tgatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||| |||||||||||||||||||||||| ||| ||||||||||||||||    
T  3002928 tgatgttttgctttgccgatttgcatgatttcttcttgaattacatcaaaac 3002979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 27853138 - 27853090
Alignment:
Q  19 atgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    |||||||||||||||||| |||||||||| ||||||||||||| |||||    
T  27853138 atgtcttgctttgccgatatgcatgatttcttcatgaattacaacaaaa 27853090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 5509941 - 5509988
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaa 65  Q
    ||||||||||||| |||||||||||||||| ||| |||||||||||||    
T  5509941 gatgtcttgcttttccgatttgcatgatttcttcgtgaattacatcaa 5509988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 28326358 - 28326308
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||||||| ||||||||||||||||||| ||| | ||||||||||||||    
T  28326358 gatgtcttgcattgccgatttgcatgatttcttcgtcaattacatcaaaac 28326308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 23054801 - 23054752
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  23054801 gatgtcttgcttttccgatttacatgatttcttcgtgaattacatcaaaa 23054752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 26092777 - 26092826
Alignment:
Q  19 atgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||| ||||||| |||||||||||||||| ||| ||||||||||||||||    
T  26092777 atgttttgctttaccgatttgcatgatttcttcttgaattacatcaaaac 26092826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 31284125 - 31284080
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    |||||||||||||||||||||||||| ||| | |||||||||||||    
T  31284125 tcttgctttgccgatttgcatgatttcttcgtcaattacatcaaaa 31284080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 19388075 - 19388028
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaa 65  Q
    ||||||||||||| |||||||| ||||||| ||| |||||||||||||    
T  19388075 gatgtcttgctttcccgatttgaatgatttcttcgtgaattacatcaa 19388028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 34276654 - 34276615
Alignment:
Q  28 tttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    |||||||||||||||||||||||| |||||||| ||||||    
T  34276654 tttgccgatttgcatgattttttcgtgaattacttcaaaa 34276615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 3114933 - 3114887
Alignment:
Q  19 atgtcttgctttgccgatttgcatgattttttcatgaattacatcaa 65  Q
    ||||||||||||| ||||||||||||||| ||| ||||| |||||||    
T  3114933 atgtcttgctttgtcgatttgcatgatttcttcgtgaataacatcaa 3114887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 8881621 - 8881575
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||| |||||||||||||||||||| ||| |||||||| |||||||    
T  8881621 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaac 8881575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 19169931 - 19169977
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||| |||||||||||||||||||| ||| |||||||| |||||||    
T  19169931 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaac 19169977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 7208394 - 7208443
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||| |||||||| | ||||||||||||||||| | |||||||||||||    
T  7208394 gatgttttgctttgtcaatttgcatgattttttcttaaattacatcaaaa 7208443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 8115505 - 8115460
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||| |||||||||||||||||||| ||| |||||||| ||||||    
T  8115505 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaa 8115460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 19912455 - 19912500
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||| |||||| ||||||||||||| |||||||||||| ||||||    
T  19912455 tcttgatttgccaatttgcatgatttcttcatgaattacttcaaaa 19912500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 20022038 - 20021993
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||| |||||||||||||||||||| ||| |||||||| ||||||    
T  20022038 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaa 20021993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 22246873 - 22246918
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||||||||||||| | |||||||| ||| |||||||||||||||    
T  22246873 tcttgctttgccgatatacatgatttcttcgtgaattacatcaaaa 22246918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 23637484 - 23637533
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||||||| |||| |||||| |||||||| ||| |||||||||||||||    
T  23637484 gatgtcttgatttgtcgatttccatgatttattcgtgaattacatcaaaa 23637533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 27073828 - 27073873
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||| |||||||||||||||||||| ||| |||||||| ||||||    
T  27073828 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaa 27073873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 27911943 - 27911987
Alignment:
Q  24 ttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  27911943 ttgctttgccgatttgcatgattttttcttgaattacatcaaaac 27911987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 30 - 68
Target Start/End: Complemental strand, 13134295 - 13134257
Alignment:
Q  30 tgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  13134295 tgccgatttgcatgatttcttcatgaattacatcaaaac 13134257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 14235509 - 14235459
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||||||| |||||| ||||||||||||| ||| ||||||||||||||||    
T  14235509 gatgtcttgttttgccaatttgcatgatttcttcgtgaattacatcaaaac 14235459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 22626378 - 22626332
Alignment:
Q  19 atgtcttgctttgccgatttgcatgattttttcatgaattacatcaa 65  Q
    ||||||| ||||||||||||||||||| ||||| |||||||||||||    
T  22626378 atgtcttactttgccgatttgcatgatcttttcgtgaattacatcaa 22626332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 22621668 - 22621713
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    |||||||||||| ||||||||||||| ||| |||||||||||||||    
T  22621668 tcttgctttgccaatttgcatgatttcttcgtgaattacatcaaaa 22621713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 7881673 - 7881716
Alignment:
Q  24 ttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    |||||||||| ||||||||||||| ||| |||||||||||||||    
T  7881673 ttgctttgccaatttgcatgatttcttcgtgaattacatcaaaa 7881716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 15811670 - 15811623
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaa 65  Q
    ||||||||||||| || ||||||||||||| ||| |||||||||||||    
T  15811670 gatgtcttgcttttccaatttgcatgatttcttcgtgaattacatcaa 15811623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 21848504 - 21848547
Alignment:
Q  24 ttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    |||||||||||||||||||||||| ||  |||||||||||||||    
T  21848504 ttgctttgccgatttgcatgatttctttgtgaattacatcaaaa 21848547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 35133756 - 35133803
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaa 65  Q
    ||||||||||||||| ||||| |||||||| ||| |||||||||||||    
T  35133756 gatgtcttgctttgctgattttcatgatttcttcgtgaattacatcaa 35133803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 17017057 - 17017007
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||| ||| |||||||||||||||||||| ||| || |||||||||||||    
T  17017057 gatgttttgatttgccgatttgcatgatttattcttggattacatcaaaac 17017007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 21333288 - 21333242
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||| |||||||||||||||||||| ||| |||||||| |||||||    
T  21333288 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaac 21333242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 18734806 - 18734761
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||| |||||||||||||||||||| ||| |||||||| ||||||    
T  18734806 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaa 18734761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 22507595 - 22507550
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||| |||||||||||||||||||| ||| |||||||| ||||||    
T  22507595 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaa 22507550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 26101736 - 26101781
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    |||||||||||| ||||||||||||| ||| |||| ||||||||||    
T  26101736 tcttgctttgccaatttgcatgatttcttcgtgaactacatcaaaa 26101781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 5047058 - 5047008
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  5047058 gatgtcttgatttgccgatttgcatgatttcttcgtgaattacatcaaaac 5047008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 20175966 - 20176016
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||||    
T  20175966 gatgtcttgctttgccgatttgcaaaatttcttcatgaattacatcaaaac 20176016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 1732543 - 1732592
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||| ||||||||||||||||||||||||| || |||||||||||||||    
T  1732543 gatgttttgctttgccgatttgcatgattttgtcttgaattacatcaaaa 1732592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 10332276 - 10332325
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||||||| ||||||||| |||||||||| |||||||||||||||||||    
T  10332276 gatgtcttgttttgccgatatgcatgatttcttcatgaattacatcaaaa 10332325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 10418429 - 10418478
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    |||||||||||||||||||||||||||||| ||| |||||||||| ||||    
T  10418429 gatgtcttgctttgccgatttgcatgatttcttcgtgaattacataaaaa 10418478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 2507035 - 2506985
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||||||||||||| |||||||||||||| ||| ||||||| ||||||||    
T  2507035 gatgtcttgctttgctgatttgcatgatttcttcgtgaattagatcaaaac 2506985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 1254919 - 1254870
Alignment:
Q  19 atgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||||||||||| |||||||| |||||| ||| ||||||||||||||||    
T  1254919 atgtcttgctttgtcgatttgcttgatttcttcgtgaattacatcaaaac 1254870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 1586065 - 1586112
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaa 65  Q
    ||||||||| |||||||||||||||||||| ||| |||||||| ||||    
T  1586065 gatgtcttgatttgccgatttgcatgatttcttcgtgaattacttcaa 1586112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 15170986 - 15170943
Alignment:
Q  20 tgtcttgctttgccgatttgcatgattttttcatgaattacatc 63  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||    
T  15170986 tgtcttgctttgccgatttacatgatttcttcgtgaattacatc 15170943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 2505715 - 2505765
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||| || ||||| ||||||||||||||| ||| ||||||||||||||||    
T  2505715 gatgtttttctttgacgatttgcatgatttcttcttgaattacatcaaaac 2505765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 5237087 - 5237041
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||| |||||||||||||||||||| ||| |||||||| |||||||    
T  5237087 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaac 5237041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 6039522 - 6039473
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||| || |||||||||| ||||||| |||||| |||||||||||||||    
T  6039522 gatgtattactttgccgatatgcatgagtttttcgtgaattacatcaaaa 6039473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 18986965 - 18986920
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||| |||||||||||||||||||| ||| |||||||| ||||||    
T  18986965 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaa 18986920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 19001593 - 19001548
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||| |||||||||||||||||||| ||| |||||||| ||||||    
T  19001593 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaa 19001548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 21502730 - 21502775
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    |||||||||| ||||||||||||||| ||| |||||||| ||||||    
T  21502730 tcttgctttgtcgatttgcatgatttcttcgtgaattacctcaaaa 21502775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 24751421 - 24751372
Alignment:
Q  19 atgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||| |||||||| ||||||||||| ||| ||| ||||||||||||||||    
T  24751421 atgttttgctttgtcgatttgcatggtttcttcgtgaattacatcaaaac 24751372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 5221193 - 5221153
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaatt 58  Q
    ||||||||||||||||||| |||||||||| ||| ||||||    
T  5221193 gatgtcttgctttgccgatatgcatgatttcttcgtgaatt 5221153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 5471949 - 5471913
Alignment:
Q  24 ttgctttgccgatttgcatgattttttcatgaattac 60  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  5471949 ttgctttgccgatttgcatgatttcttcttgaattac 5471913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 19154708 - 19154756
Alignment:
Q  18 gatgtcttgctttgccgatttgcatga-ttttttcatgaattacatcaa 65  Q
    |||||||| ||||||| |||||||||| ||||||| |||||||||||||    
T  19154708 gatgtcttactttgccaatttgcatgatttttttcgtgaattacatcaa 19154756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 20577386 - 20577426
Alignment:
Q  28 tttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||||||||||||||||| ||| |||||||| |||||||    
T  20577386 tttgccgatttgcatgatttcttcgtgaattacttcaaaac 20577426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 20754107 - 20754155
Alignment:
Q  18 gatgtcttgctttgccgatttgcatga-ttttttcatgaattacatcaa 65  Q
    |||||||| ||||||| |||||||||| ||||||| |||||||||||||    
T  20754107 gatgtcttactttgccaatttgcatgatttttttcgtgaattacatcaa 20754155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000001; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 15520843 - 15520896
Alignment:
Q  15 tctgatgtctt-gctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||||||||||||    
T  15520843 tctgatgtctttgctttgccgatttgcatgatttcttcttgaattacatcaaaa 15520896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 18832094 - 18832141
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaa 65  Q
    ||||| |||||||||||||||||||||||| ||| |||||||||||||    
T  18832094 gatgtattgctttgccgatttgcatgatttcttcgtgaattacatcaa 18832141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 18939392 - 18939439
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaa 65  Q
    |||||||||||||| ||||||||||||||| ||| |||||||||||||    
T  18939392 gatgtcttgctttgtcgatttgcatgatttcttcgtgaattacatcaa 18939439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 24658520 - 24658473
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaact 69  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||||||    
T  24658520 tcttgatttgccgatttgcatgatttcttcatgaattacttcaaaact 24658473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 18227484 - 18227534
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||||||||||||| |||||||||||||| ||| ||||||||||| ||||    
T  18227484 gatgtcttgctttgctgatttgcatgatttcttcgtgaattacatctaaac 18227534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 28254763 - 28254813
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||||||||||||| ||||||||||||| ||| |||||| |||||||||    
T  28254763 gatgtcttgctttgccaatttgcatgatttcttcgtgaattgcatcaaaac 28254813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 28280162 - 28280204
Alignment:
Q  26 gctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||||||||||||||||||| ||| ||||||||||||||||    
T  28280162 gctttgccgatttgcatgatttcttcttgaattacatcaaaac 28280204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 17336549 - 17336500
Alignment:
Q  19 atgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||| ||| |||||||||||||||||||| ||| ||||||||||||||||    
T  17336549 atgttttgttttgccgatttgcatgatttattcttgaattacatcaaaac 17336500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 26253354 - 26253391
Alignment:
Q  31 gccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  26253354 gccgatttgcatgattttttcgtgaattacatcaaaac 26253391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 31600300 - 31600251
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    |||||||||||||||||||||||||||||| ||| | |||||||| ||||    
T  31600300 gatgtcttgctttgccgatttgcatgatttcttcgtaaattacataaaaa 31600251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 16522125 - 16522079
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||| ||| |||||||||||||||| |||||||||||| |||||||    
T  16522125 tcttgattttccgatttgcatgatttcttcatgaattacttcaaaac 16522079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 26348314 - 26348364
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||||||| ||| || ||||||||||||| ||| ||||||||||||||||    
T  26348314 gatgtcttgattttccaatttgcatgatttcttcgtgaattacatcaaaac 26348364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 17469783 - 17469734
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    |||| ||||||||||| ||||||||||||| ||| |||||||| ||||||    
T  17469783 gatgccttgctttgcctatttgcatgatttcttcgtgaattacttcaaaa 17469734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 19003986 - 19003941
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||| |||||||||||||||||||| ||| |||||||| ||||||    
T  19003986 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaa 19003941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 32416054 - 32416006
Alignment:
Q  19 atgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    |||| ||| |||||||||||||||||||||  | |||||||||||||||    
T  32416054 atgttttgttttgccgatttgcatgattttgccttgaattacatcaaaa 32416006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 18971000 - 18970949
Alignment:
Q  15 tctgatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaa 66  Q
    ||||||||||||||||||||  ||||||||||| ||| ||||||||||||||    
T  18971000 tctgatgtcttgctttgccggattgcatgatttcttcgtgaattacatcaaa 18970949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 32141616 - 32141566
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||||||| |||||||||||||||||||| ||| |||||| |||||||||    
T  32141616 gatgtcttgttttgccgatttgcatgatttcttcgtgaatttcatcaaaac 32141566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 8445698 - 8445649
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||| ||||||||||||||||||| |||| ||| |||||||||||||||    
T  8445698 gatgttttgctttgccgatttgcataatttcttcttgaattacatcaaaa 8445649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 22627258 - 22627307
Alignment:
Q  19 atgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||||||||||||||| |||||||||| ||| ||||||||| ||||||    
T  22627258 atgtcttgctttgccgatatgcatgatttcttcgtgaattacaacaaaac 22627307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 26651859 - 26651810
Alignment:
Q  19 atgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||||||||||||||| ||||| |||| ||||||||||||| ||||||    
T  26651859 atgtcttgctttgccgatatgcataatttcttcatgaattacaacaaaac 26651810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 27871158 - 27871207
Alignment:
Q  19 atgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||| |||||||||||||||||||||||| | | ||||||||||||||||    
T  27871158 atgttttgctttgccgatttgcatgatttctccttgaattacatcaaaac 27871207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 29717580 - 29717531
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||| ||||||||||||||||||| |||| ||| |||||||||||||||    
T  29717580 gatgtattgctttgccgatttgcattatttcttcgtgaattacatcaaaa 29717531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 34579994 - 34579949
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    |||||||||||||||||||||||||| ||| |||||||||| ||||    
T  34579994 tcttgctttgccgatttgcatgatttcttcgtgaattacataaaaa 34579949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 34585743 - 34585698
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    |||||||||||||||||||||||||| ||| |||||||||| ||||    
T  34585743 tcttgctttgccgatttgcatgatttcttcgtgaattacataaaaa 34585698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 32140734 - 32140694
Alignment:
Q  19 atgtcttgctttgccgatttgcatgattttttcatgaatta 59  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  32140734 atgtcttgttttgccgatttgcatgatttcttcatgaatta 32140694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 8501735 - 8501685
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||||| ||||| ||||||||||||||| ||  ||||||||||||||||    
T  8501735 gatgtctttctttgtcgatttgcatgatttatttgtgaattacatcaaaac 8501685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 24086527 - 24086481
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||| |||||||||||||||||||| ||| |||||||| |||||||    
T  24086527 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaac 24086481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 25537432 - 25537478
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||| |||||||||||||||||||| ||| |||||||| |||||||    
T  25537432 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaac 25537478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 25922481 - 25922527
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||| |||||||||||||||||||| ||| |||||||| |||||||    
T  25922481 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaac 25922527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 32138134 - 32138088
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    ||||| |||||||||||||||||||| ||| |||||||| |||||||    
T  32138134 tcttgttttgccgatttgcatgatttcttcgtgaattacgtcaaaac 32138088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 21905602 - 21905647
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||| ||||| |||||||||||||| |||||||||||| ||||||    
T  21905602 tcttgatttgctgatttgcatgatttcttcatgaattacttcaaaa 21905647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 25196487 - 25196532
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||| ||||||||||||| |||||||||| |||||||| ||||||    
T  25196487 tcttgatttgccgatttgcttgattttttcgtgaattacttcaaaa 25196532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 27907743 - 27907698
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    ||||| |||||||||||||||||||| ||| |||||||| ||||||    
T  27907743 tcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaa 27907698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 32130924 - 32130875
Alignment:
Q  19 atgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||||| |||||||||||| ||||||| ||  ||||||||||||||||    
T  32130924 atgtcttgttttgccgatttgtatgatttctttgtgaattacatcaaaac 32130875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 28930156 - 28930196
Alignment:
Q  28 tttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||||||||||||||||| ||| |||||||| |||||||    
T  28930156 tttgccgatttgcatgatttcttcgtgaattacttcaaaac 28930196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 88661 - 88614
Alignment:
Q  18 gatgtcttgctttgccgatttgcatgattttttcatgaattacatcaa 65  Q
    |||||||||| ||||||||||||||||||| ||  |||||||||||||    
T  88661 gatgtcttgcattgccgatttgcatgatttctttgtgaattacatcaa 88614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 202053 - 202010
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaa 65  Q
    |||||||||| ||||||||||||||| | |||||||||||||||    
T  202053 tcttgctttgtcgatttgcatgatttctccatgaattacatcaa 202010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 95499 - 95545
Alignment:
Q  21 gtcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    |||||| |||||||||||||||||||| ||| |||||||| ||||||    
T  95499 gtcttggtttgccgatttgcatgatttcttcgtgaattacttcaaaa 95545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0441 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0441
Description:

Target: scaffold0441; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 2186 - 2141
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    |||||| |||||||||| |||||||| ||| |||||||||||||||    
T  2186 tcttgcattgccgatttacatgatttcttcgtgaattacatcaaaa 2141  T

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Target: scaffold0072 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 38164 - 38213
Alignment:
Q  19 atgtcttgctttgccgatttgcatgattttttcatgaattacatcaaaac 68  Q
    |||||||| ||| ||||||||| |||||| ||| ||||||||||||||||    
T  38164 atgtcttgtttttccgatttgcgtgatttcttcgtgaattacatcaaaac 38213  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 244051 - 244006
Alignment:
Q  22 tcttgctttgccgatttgcatgattttttcatgaattacatcaaaa 67  Q
    |||||||||| ||||||||||||||| ||  |||||||||||||||    
T  244051 tcttgctttgacgatttgcatgatttctttgtgaattacatcaaaa 244006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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