View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18384_low_18 (Length: 367)
Name: NF18384_low_18
Description: NF18384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18384_low_18 |
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Alignment Details
Target: chr6 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 1 - 352
Target Start/End: Original strand, 31587447 - 31587798
Alignment:
| Q |
1 |
cctgatgttttattggatgaggaagatgaagatgagaaaatggtggttccatggannnnnnnnnnnnnnnnnnnaatgaggagtattgatagtggtggtg |
100 |
Q |
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| T |
31587447 |
cctgatgttttattggatgaggaagatgaagatgagaaaatggtggttccatggaagagagaggaagagagagaaatgaggagtattgatagtggtggtg |
31587546 |
T |
|
| Q |
101 |
gaattaaagaagaggggtttaagaagaggacattaaaggcaccatctttagctgaattgacacttgaggatgaattgttgaggaggttgaggagagaggg |
200 |
Q |
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| T |
31587547 |
gaattaaagaagaggggtttaagaagaggacattaaaggcaccatctttagctgaattgacacttgaggatgaattgttgaggaggttgaggagagaggg |
31587646 |
T |
|
| Q |
201 |
tatgcatttgagagaaagggttagtgtacctaaagctggattgacacaagaggttatggagaagattcatgagagctggaggaaaaaggagttggttagg |
300 |
Q |
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| T |
31587647 |
tatgcatttgagagaaagggttagtgtacccaaagctggattgacacaagaggttatggagaagattcatgagagctggaggaaaaaggagttggttagg |
31587746 |
T |
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| Q |
301 |
cttaagtttcatgaagagcttgctaagaatatgaggattgctcatcagattg |
352 |
Q |
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| T |
31587747 |
cttaagtttcatgaagagcttgctaagaatatgaggattgctcatcagattg |
31587798 |
T |
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