View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18384_low_19 (Length: 347)

Name: NF18384_low_19
Description: NF18384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18384_low_19
NF18384_low_19
[»] chr7 (51 HSPs)
chr7 (1-155)||(19889353-19889509)
chr7 (1-155)||(5909291-5909447)
chr7 (1-155)||(39757119-39757275)
chr7 (1-155)||(9331974-9332130)
chr7 (1-143)||(23982764-23982907)
chr7 (1-155)||(7170015-7170171)
chr7 (1-155)||(3561887-3562043)
chr7 (1-155)||(36548469-36548625)
chr7 (6-132)||(384444-384570)
chr7 (1-143)||(12085940-12086082)
chr7 (26-155)||(47120228-47120359)
chr7 (1-120)||(18102239-18102359)
chr7 (1-87)||(41331465-41331551)
chr7 (1-143)||(24462964-24463106)
chr7 (1-143)||(25709408-25709551)
chr7 (1-66)||(24250602-24250667)
chr7 (70-155)||(24250326-24250413)
chr7 (1-155)||(47457470-47457627)
chr7 (15-153)||(39869137-39869276)
chr7 (1-100)||(5833424-5833524)
chr7 (1-111)||(7040261-7040371)
chr7 (1-68)||(22334030-22334097)
chr7 (1-155)||(33343001-33343157)
chr7 (39-155)||(19868126-19868245)
chr7 (1-68)||(8595000-8595066)
chr7 (1-143)||(46290037-46290179)
chr7 (1-155)||(42750301-42750452)
chr7 (1-98)||(8170593-8170690)
chr7 (1-155)||(34270278-34270430)
chr7 (1-120)||(7899495-7899615)
chr7 (1-143)||(8091321-8091464)
chr7 (1-60)||(4969883-4969942)
chr7 (8-118)||(12624688-12624798)
chr7 (83-155)||(12650833-12650907)
chr7 (1-60)||(26300681-26300740)
chr7 (2-78)||(38798080-38798156)
chr7 (2-78)||(38798218-38798294)
chr7 (2-78)||(42593404-42593480)
chr7 (2-78)||(45645459-45645535)
chr7 (1-143)||(3530123-3530265)
chr7 (1-60)||(26037203-26037262)
chr7 (1-60)||(29398143-29398202)
chr7 (1-60)||(45501569-45501628)
chr7 (1-35)||(820550-820584)
chr7 (1-155)||(32117827-32117983)
chr7 (1-47)||(33072104-33072150)
chr7 (1-58)||(26050470-26050527)
chr7 (1-58)||(26059829-26059886)
chr7 (2-87)||(28061333-28061418)
chr7 (65-116)||(24699188-24699240)
chr7 (9-108)||(47707901-47708001)
[»] chr3 (43 HSPs)
chr3 (1-155)||(11610927-11611083)
chr3 (1-155)||(20938069-20938226)
chr3 (1-143)||(13495320-13495463)
chr3 (4-142)||(16875037-16875175)
chr3 (1-155)||(3863342-3863498)
chr3 (12-143)||(50364217-50364348)
chr3 (1-116)||(29686374-29686489)
chr3 (1-143)||(40497074-40497216)
chr3 (1-143)||(38389473-38389616)
chr3 (30-155)||(54621256-54621383)
chr3 (1-116)||(24978700-24978815)
chr3 (1-143)||(32553393-32553535)
chr3 (57-155)||(51339249-51339349)
chr3 (1-56)||(11611090-11611145)
chr3 (1-155)||(46492352-46492509)
chr3 (1-82)||(23523034-23523115)
chr3 (1-117)||(36426418-36426535)
chr3 (1-68)||(41151735-41151802)
chr3 (1-155)||(2571281-2571437)
chr3 (11-133)||(38786343-38786464)
chr3 (1-155)||(51618062-51618216)
chr3 (1-142)||(37055375-37055517)
chr3 (1-155)||(10307779-10307935)
chr3 (1-155)||(23638058-23638215)
chr3 (1-110)||(23803055-23803165)
chr3 (1-77)||(39364879-39364955)
chr3 (9-48)||(36812380-36812419)
chr3 (83-155)||(46845532-46845606)
chr3 (17-120)||(1569215-1569319)
chr3 (2-78)||(29932362-29932438)
chr3 (2-78)||(29981516-29981592)
chr3 (1-60)||(8165756-8165815)
chr3 (83-155)||(24569329-24569403)
chr3 (79-138)||(30214098-30214156)
chr3 (1-111)||(35414818-35414929)
chr3 (83-155)||(37444159-37444232)
chr3 (1-56)||(50204517-50204572)
chr3 (1-35)||(40930186-40930220)
chr3 (2-48)||(49396502-49396548)
chr3 (3-60)||(51401550-51401607)
chr3 (30-117)||(23320122-23320210)
chr3 (54-101)||(26486439-26486487)
chr3 (1-33)||(33474482-33474514)
[»] chr2 (48 HSPs)
chr2 (1-155)||(27665053-27665209)
chr2 (165-347)||(5582960-5583130)
chr2 (1-155)||(16126568-16126724)
chr2 (1-155)||(19228438-19228594)
chr2 (1-154)||(14377438-14377593)
chr2 (3-116)||(4821330-4821443)
chr2 (1-155)||(12016679-12016835)
chr2 (1-155)||(16919163-16919319)
chr2 (3-155)||(22705467-22705621)
chr2 (7-155)||(13351226-13351377)
chr2 (1-156)||(16123290-16123447)
chr2 (3-136)||(2060053-2060187)
chr2 (1-139)||(8770895-8771032)
chr2 (2-155)||(15411632-15411788)
chr2 (18-155)||(39904074-39904213)
chr2 (2-155)||(26229864-26230018)
chr2 (3-117)||(15231883-15231998)
chr2 (9-139)||(41492150-41492279)
chr2 (37-155)||(10690795-10690915)
chr2 (9-117)||(37471757-37471866)
chr2 (1-132)||(9747354-9747486)
chr2 (1-142)||(45062225-45062367)
chr2 (1-111)||(9450315-9450426)
chr2 (1-155)||(12919359-12919517)
chr2 (1-111)||(20566026-20566137)
chr2 (70-155)||(12438727-12438813)
chr2 (1-143)||(7757795-7757937)
chr2 (285-347)||(5573685-5573747)
chr2 (1-155)||(5583567-5583723)
chr2 (54-143)||(22162139-22162228)
chr2 (1-155)||(23932577-23932734)
chr2 (1-78)||(29157838-29157915)
chr2 (2-98)||(35729188-35729285)
chr2 (1-116)||(24729586-24729702)
chr2 (83-143)||(25998094-25998154)
chr2 (83-155)||(43388858-43388932)
chr2 (2-87)||(43941864-43941949)
chr2 (2-78)||(3286587-3286663)
chr2 (4-143)||(34213961-34214103)
chr2 (1-36)||(6109523-6109558)
chr2 (1-107)||(38248429-38248536)
chr2 (1-35)||(8065258-8065292)
chr2 (1-35)||(26003355-26003389)
chr2 (81-142)||(27865905-27865965)
chr2 (2-78)||(3951342-3951418)
chr2 (1-33)||(5853472-5853504)
chr2 (2-78)||(8847879-8847955)
chr2 (1-33)||(16493541-16493573)
[»] chr1 (49 HSPs)
chr1 (1-155)||(39150336-39150492)
chr1 (1-155)||(17919466-17919622)
chr1 (1-155)||(313762-313918)
chr1 (1-116)||(6569994-6570109)
chr1 (3-132)||(39930812-39930941)
chr1 (1-120)||(30288873-30288992)
chr1 (1-155)||(6754484-6754640)
chr1 (1-155)||(44918037-44918193)
chr1 (1-143)||(30363004-30363147)
chr1 (4-155)||(8062217-8062370)
chr1 (1-155)||(41624842-41624998)
chr1 (1-143)||(30171905-30172048)
chr1 (1-143)||(30187446-30187589)
chr1 (11-120)||(52833491-52833600)
chr1 (24-155)||(32716195-32716328)
chr1 (1-143)||(34801994-34802136)
chr1 (1-143)||(36490805-36490948)
chr1 (1-77)||(10896446-10896522)
chr1 (14-145)||(21854139-21854271)
chr1 (1-143)||(22167361-22167504)
chr1 (11-116)||(31100952-31101058)
chr1 (9-74)||(44007547-44007612)
chr1 (1-111)||(6307561-6307671)
chr1 (3-87)||(3096292-3096376)
chr1 (1-116)||(9516634-9516750)
chr1 (1-153)||(23576423-23576577)
chr1 (1-143)||(23591724-23591867)
chr1 (1-155)||(1502729-1502885)
chr1 (1-87)||(12947563-12947649)
chr1 (17-87)||(21391924-21391994)
chr1 (91-155)||(51382384-51382450)
chr1 (1-116)||(13241810-13241926)
chr1 (1-61)||(25465267-25465327)
chr1 (1-116)||(35438768-35438884)
chr1 (6-94)||(5057077-5057166)
chr1 (2-78)||(42589264-42589340)
chr1 (2-78)||(44013017-44013093)
chr1 (1-60)||(6180296-6180355)
chr1 (1-35)||(5875224-5875258)
chr1 (1-87)||(33673744-33673830)
chr1 (1-35)||(35512860-35512894)
chr1 (12-101)||(52337834-52337924)
chr1 (64-132)||(6520749-6520817)
chr1 (1-117)||(32543059-32543176)
chr1 (2-78)||(4249298-4249374)
chr1 (2-78)||(4249622-4249698)
chr1 (2-78)||(4249946-4250022)
chr1 (2-78)||(9661988-9662064)
chr1 (24-143)||(39627603-39627723)
[»] scaffold0061 (1 HSPs)
scaffold0061 (1-155)||(52788-52944)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-155)||(145690-145846)
[»] chr8 (57 HSPs)
chr8 (1-155)||(10129116-10129272)
chr8 (1-155)||(7140468-7140624)
chr8 (1-155)||(13327950-13328106)
chr8 (18-155)||(9743874-9744013)
chr8 (1-155)||(35678284-35678440)
chr8 (1-155)||(39701812-39701968)
chr8 (1-129)||(18567425-18567553)
chr8 (1-137)||(39024866-39025002)
chr8 (6-155)||(40210835-40210986)
chr8 (10-143)||(8140594-8140727)
chr8 (1-155)||(26682080-26682237)
chr8 (1-155)||(14816135-14816291)
chr8 (1-155)||(14829449-14829605)
chr8 (1-155)||(19343845-19344002)
chr8 (19-155)||(38527833-38527975)
chr8 (1-155)||(9801681-9801837)
chr8 (1-143)||(4080403-4080545)
chr8 (8-88)||(45519578-45519658)
chr8 (1-143)||(4084552-4084694)
chr8 (1-143)||(4102859-4103001)
chr8 (1-143)||(8284577-8284721)
chr8 (1-116)||(1203655-1203770)
chr8 (1-142)||(44091346-44091487)
chr8 (1-143)||(31812139-31812282)
chr8 (1-130)||(26834600-26834730)
chr8 (1-99)||(14961672-14961771)
chr8 (1-155)||(2161400-2161556)
chr8 (1-143)||(12189597-12189740)
chr8 (1-143)||(12434025-12434168)
chr8 (1-117)||(7393254-7393370)
chr8 (9-74)||(31451420-31451485)
chr8 (1-155)||(3306064-3306220)
chr8 (1-143)||(12132009-12132152)
chr8 (1-143)||(20514659-20514802)
chr8 (39-143)||(34249703-34249809)
chr8 (1-142)||(6818044-6818186)
chr8 (1-60)||(28014867-28014926)
chr8 (1-143)||(43717561-43717704)
chr8 (1-59)||(26363999-26364057)
chr8 (1-67)||(29642706-29642772)
chr8 (11-81)||(35740948-35741018)
chr8 (1-47)||(36967079-36967125)
chr8 (3-116)||(38047949-38048062)
chr8 (1-51)||(45518071-45518121)
chr8 (1-78)||(15198909-15198986)
chr8 (11-56)||(34405085-34405130)
chr8 (2-78)||(10543639-10543715)
chr8 (62-155)||(39703466-39703561)
chr8 (70-142)||(45516316-45516387)
chr8 (1-40)||(13496718-13496757)
chr8 (1-60)||(27874690-27874749)
chr8 (1-35)||(22838360-22838394)
chr8 (1-35)||(38212953-38212987)
chr8 (7-60)||(297205-297258)
chr8 (85-155)||(35745982-35746054)
chr8 (2-78)||(16586732-16586808)
chr8 (1-33)||(40225996-40226028)
[»] chr5 (32 HSPs)
chr5 (1-155)||(2795536-2795692)
chr5 (1-142)||(4047440-4047581)
chr5 (14-143)||(9184234-9184363)
chr5 (10-155)||(30328345-30328492)
chr5 (3-155)||(12642004-12642158)
chr5 (1-155)||(8103589-8103745)
chr5 (5-143)||(28629905-28630043)
chr5 (1-155)||(11636744-11636900)
chr5 (1-143)||(34578038-34578180)
chr5 (1-120)||(41350252-41350371)
chr5 (1-155)||(11375972-11376129)
chr5 (9-155)||(15190885-15191034)
chr5 (1-117)||(31365959-31366075)
chr5 (1-132)||(16174631-16174762)
chr5 (1-96)||(14466503-14466598)
chr5 (14-145)||(24329657-24329789)
chr5 (1-155)||(30839794-30839950)
chr5 (1-155)||(36597592-36597748)
chr5 (1-51)||(30893748-30893798)
chr5 (1-77)||(32019993-32020069)
chr5 (65-143)||(5958196-5958275)
chr5 (1-142)||(6863584-6863725)
chr5 (69-142)||(29538755-29538828)
chr5 (1-116)||(31567500-31567616)
chr5 (1-60)||(3398330-3398389)
chr5 (13-143)||(10664986-10665116)
chr5 (1-115)||(15240959-15241074)
chr5 (2-78)||(12332429-12332505)
chr5 (2-78)||(31613159-31613235)
chr5 (2-78)||(31705021-31705097)
chr5 (2-78)||(40454153-40454229)
chr5 (1-76)||(35151313-35151388)
[»] chr4 (50 HSPs)
chr4 (1-154)||(7349702-7349857)
chr4 (1-155)||(29190825-29190981)
chr4 (1-138)||(41415566-41415703)
chr4 (1-153)||(10813503-10813658)
chr4 (1-155)||(23553582-23553739)
chr4 (1-153)||(35999956-36000103)
chr4 (1-143)||(47326901-47327044)
chr4 (1-143)||(47341697-47341840)
chr4 (1-143)||(16667393-16667536)
chr4 (1-100)||(23051391-23051490)
chr4 (4-142)||(53961350-53961488)
chr4 (1-129)||(4329635-4329763)
chr4 (1-137)||(48910811-48910947)
chr4 (1-143)||(54495646-54495789)
chr4 (3-132)||(10389279-10389408)
chr4 (1-130)||(27362430-27362560)
chr4 (4-143)||(8736823-8736962)
chr4 (4-155)||(2096883-2097037)
chr4 (1-68)||(49228756-49228823)
chr4 (1-143)||(17409850-17409993)
chr4 (1-139)||(34941308-34941447)
chr4 (1-111)||(51691399-51691510)
chr4 (1-155)||(49181084-49181241)
chr4 (27-120)||(39539513-39539607)
chr4 (1-154)||(39876844-39876999)
chr4 (5-143)||(25843317-25843459)
chr4 (70-155)||(49228369-49228456)
chr4 (1-155)||(9759151-9759307)
chr4 (1-155)||(50352315-50352471)
chr4 (3-134)||(23438191-23438322)
chr4 (18-133)||(39216057-39216173)
chr4 (1-60)||(18882276-18882335)
chr4 (1-60)||(24684947-24685006)
chr4 (1-110)||(52391357-52391467)
chr4 (3-60)||(19450911-19450968)
chr4 (5-117)||(36971326-36971439)
chr4 (2-78)||(32459422-32459498)
chr4 (3-155)||(40049571-40049725)
chr4 (2-78)||(49250345-49250421)
chr4 (1-115)||(51070407-51070520)
chr4 (83-133)||(46803574-46803624)
chr4 (50-142)||(13009813-13009906)
chr4 (83-120)||(16069299-16069336)
chr4 (3-60)||(19468304-19468361)
chr4 (83-120)||(27298940-27298977)
chr4 (1-78)||(42479901-42479978)
chr4 (1-33)||(4779445-4779477)
chr4 (2-78)||(41887579-41887655)
chr4 (83-143)||(49332359-49332419)
chr4 (70-102)||(55517469-55517501)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-155)||(13098-13254)
[»] chr6 (33 HSPs)
chr6 (1-143)||(31069591-31069733)
chr6 (24-155)||(5362925-5363058)
chr6 (1-143)||(2830690-2830832)
chr6 (1-143)||(31169772-31169915)
chr6 (23-143)||(22974604-22974724)
chr6 (23-143)||(23813677-23813797)
chr6 (1-143)||(10887055-10887198)
chr6 (2-132)||(1017788-1017919)
chr6 (1-106)||(17596404-17596510)
chr6 (1-116)||(31568163-31568278)
chr6 (1-143)||(6016882-6017025)
chr6 (1-143)||(18332697-18332840)
chr6 (1-61)||(3853052-3853112)
chr6 (1-155)||(8977475-8977632)
chr6 (3-78)||(31503834-31503909)
chr6 (1-155)||(14228135-14228291)
chr6 (1-155)||(28943778-28943934)
chr6 (81-155)||(26602520-26602596)
chr6 (1-116)||(17141328-17141444)
chr6 (1-155)||(29863311-29863468)
chr6 (70-143)||(3850578-3850651)
chr6 (1-60)||(34692464-34692523)
chr6 (1-155)||(17552596-17552752)
chr6 (1-98)||(23936385-23936483)
chr6 (18-51)||(26602478-26602511)
chr6 (3-155)||(33017737-33017891)
chr6 (2-78)||(34733711-34733787)
chr6 (1-143)||(30591172-30591315)
chr6 (39-109)||(34300422-34300493)
chr6 (1-35)||(20979107-20979141)
chr6 (1-38)||(32614953-32614990)
chr6 (35-68)||(32615281-32615314)
chr6 (72-116)||(32615540-32615584)
[»] scaffold0727 (1 HSPs)
scaffold0727 (1-155)||(5703-5860)
[»] scaffold0155 (1 HSPs)
scaffold0155 (1-143)||(3422-3565)
[»] scaffold0111 (1 HSPs)
scaffold0111 (1-143)||(37123-37266)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-120)||(182093-182211)
[»] scaffold0618 (1 HSPs)
scaffold0618 (1-142)||(8423-8564)
[»] scaffold0009 (2 HSPs)
scaffold0009 (3-139)||(191326-191461)
scaffold0009 (1-152)||(43479-43633)
[»] scaffold0073 (1 HSPs)
scaffold0073 (1-111)||(16544-16654)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-143)||(94027-94170)
[»] scaffold0192 (1 HSPs)
scaffold0192 (3-62)||(13574-13633)
[»] scaffold0149 (1 HSPs)
scaffold0149 (3-117)||(22516-22631)
[»] scaffold0503 (1 HSPs)
scaffold0503 (1-117)||(9096-9213)
[»] scaffold0136 (1 HSPs)
scaffold0136 (1-35)||(1452-1486)


Alignment Details
Target: chr7 (Bit Score: 122; Significance: 2e-62; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 19889509 - 19889353
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||    
T  19889509 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaacttttaataaataattgt 19889410  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||||||||||||||| |||  |||||||||||||||||||  ||||||||||||||    
T  19889409 tggttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcaca 19889353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 5909291 - 5909447
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||    
T  5909291 tcatgtgtaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaatatgtagcttttaataaataattgt 5909390  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||||||||||||||| |||   ||||||||||||||||||  ||||||||||||||    
T  5909391 tggttttcaatgaaaagttactgcttttagttgccttaacatgtgcaatattgcaca 5909447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 39757119 - 39757275
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||| ||||| || |||||||||||| ||||||||||||| ||||||| |||||||||    
T  39757119 tcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttaacttgaaatttgtgttttttatattaaatatgtagcttttaatcaataattgt 39757218  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    || |||||||||||||||||  |||||||||| ||||||||  ||||||||||||||    
T  39757219 tgattttcaatgaaaaattactacttttagttaccttaacatgtgcaatattgcaca 39757275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 9332130 - 9331974
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||   |||||| |||||||||    
T  9332130 tcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaatatgtaacatttaatcaataattgt 9332031  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    || ||||||||||||| |||  |||||||||| ||||||||  ||||||||||||||    
T  9332030 tgattttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcaca 9331974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 23982764 - 23982907
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||| | |||||||||||| ||||||    
T  23982764 tcatgtgcaaatttgcacacgttaagaaatttaaagtagtaactttgacttggaacttgtgtattttatattaaatatttaagtttttaataattaattg 23982863  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    |||||||| |||||||| |||  |||||||||||||||||||||    
T  23982864 ttggttttgaatgaaaagttactacttttagttgccttaacatg 23982907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 7170171 - 7170015
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||| ||||||| |||||||||| ||||||    
T  7170171 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgtagatttttaataattaattg 7170072  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||| ||||||| |||| |||  | |||||||||||||||||  ||||||||||||||    
T  7170071 ttgg-tttcaataaaaagttactatttttagttgccttaacatgtgcaatattgcaca 7170015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 3561887 - 3562043
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||  ||||||||||||||| ||||||||||||| ||||||| ||||||| |    
T  3561887 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttatattaaatatgtagcttttaatcaataattat 3561986  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    || ||||||||||||| |||   ||||||||| ||||||||  ||||||||||||||    
T  3561987 tgattttcaatgaaaagttactgcttttagttaccttaacatgtgcaatattgcaca 3562043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 36548469 - 36548625
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||  || |||| ||||||| |||||||||||| | |||||| |||||||||    
T  36548469 tcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttaaaatttgtattttttatattaaatatgtaatatttaatcaataattgt 36548568  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    ||||||||||| ||||||||  |||||||||| ||||||||  ||||||||||||||    
T  36548569 tggttttcaataaaaaattactacttttagttcccttaacatgtgcaatattgcaca 36548625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 384444 - 384570
Alignment:
Q  6 tgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggtt 105  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||| ||||||| ||||||||||| ||    
T  384444 tgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgttttttttatattaaatatgtagcttttaatcaataattgttgatt 384543  T
Q  106 ttcaatgaaaaattatcacttttagtt 132  Q
    ||||||||||| |||  ||||||||||    
T  384544 ttcaatgaaaagttactacttttagtt 384570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 12085940 - 12086082
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    |||||||||||||||||||| ||||||||||||||  ||||| ||||||||| ||||||||||||||| ||||||||| ||  |||||||||||||||||    
T  12085940 tcatgtgcaaatttgcacataataagaagtttaaataagtaattttgacttgaaacttgtgttttttatattaaatatttaacttttaataaataattgt 12086039  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    || ||||||| ||||| |||  |||||||||||||||||||||    
T  12086040 tgattttcaacgaaaagttactacttttagttgccttaacatg 12086082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 26 - 155
Target Start/End: Original strand, 47120228 - 47120359
Alignment:
Q  26 gaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatcact 125  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||   |||||| |||||||||||||||||||||||||||||  |||    
T  47120228 gaagtttaaattagtaactttgacttggaacttgtgttttttatattaaatatgtaacatttaatcaataattgttggttttcaatgaaaaattactact 47120327  T
Q  126 tttagttgccttaaca--tgcaatattgcaca 155  Q
    ||||||| || |||||  ||||||||||||||    
T  47120328 tttagttaccataacatgtgcaatattgcaca 47120359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 18102239 - 18102359
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtg-ttttttaaattaaatatgtagtttttaataaataattg 99  Q
    ||||||||||||||||||||| ||||||||||||| || ||||||||||||| |||||||| ||||||| ||||||||||||   |||||| ||||||||    
T  18102239 tcatgtgcaaatttgcacatgttaagaagtttaaattaataactttgacttgaaacttgtgtttttttatattaaatatgtaacatttaatcaataattg 18102338  T
Q  100 ttggttttcaatgaaaaatta 120  Q
    ||| |||||||||||||||||    
T  18102339 ttgattttcaatgaaaaatta 18102359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 41331465 - 41331551
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttttt 87  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||| ||||||||||||| ||||    
T  41331465 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaatatgtaggtttt 41331551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 24462964 - 24463106
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttttt-aataaataattg 99  Q
    ||||||||||||||||||||| ||||||||||||| || ||||||||||||  |  ||||   ||||| |||||||||||||||||| |||||||| |||    
T  24462964 tcatgtgcaaatttgcacatgttaagaagtttaaaataataactttgacttaaagtttgtacattttatattaaatatgtagttttttaataaatacttg 24463063  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||| |||||||| | ||||||  |||||||||||||||||||||    
T  24463064 ttg-ttttcaataagaaattactacttttagttgccttaacatg 24463106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 25709408 - 25709551
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||  |||||||||||   ||| | |||||||| |||| |||||||||||| ||||    
T  25709408 tcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgtattggaacttgttcatttcatattaaataggtagctttttaataaattattg 25709507  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||| || ||||| ||||||||  |||||||||||  ||||||||    
T  25709508 ttgtttatcaataaaaaattactacttttagttgatttaacatg 25709551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 24250667 - 24250602
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttt 66  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24250667 tcatgtggaaatttgaacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttt 24250602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 70 - 155
Target Start/End: Complemental strand, 24250413 - 24250326
Alignment:
Q  70 attaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||  |||||||||| ||||||||  ||||||||||||||    
T  24250413 attaaatatgtagcttttaataaataattgttggttttcaatgaaaagttaatacttttagtttccttaacatgtgcaatattgcaca 24250326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 47457470 - 47457627
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    ||||||||||||||||||||| ||| || |||||||||||||||||||||||||| || ||  ||||| |||| || ||||| |||| ||||||||||||    
T  47457470 tcatgtgcaaatttgcacatgttaaaaaatttaaagtagtaactttgacttggaatttatgcattttatattatatgtgtagcttttaaataaataattg 47457569  T
Q  100 ttggttttcaat-gaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    ||  ||||||||  ||||||||  |||||||||||  ||||||  ||||||||||||||    
T  47457570 tt-attttcaataaaaaaattactacttttagttgttttaacatgtgcaatattgcaca 47457627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 153
Target Start/End: Complemental strand, 39869276 - 39869137
Alignment:
Q  15 gcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattgttggttttcaatga 113  Q
    |||||||||||||||| ||||||||||| ||||||||| ||||||||  ||| | ||||||||||||  |||||||||| ||||||||||||||||||||    
T  39869276 gcacatgataagaagtgtaaagtagtaa-tttgacttgaaacttgtgcattt-atattaaatatgtaaatttttaataattaattgttggttttcaatga 39869179  T
Q  114 aaaattatcacttttagttgccttaaca--tgcaatattgca 153  Q
    ||| |||  | |||||||| | ||||||  ||||||||||||    
T  39869178 aaagttactatttttagtttctttaacatgtgcaatattgca 39869137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 5833524 - 5833424
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    ||||||||||||||||||||| ||| |||||||||| |||||||| | ||| |||||||||  || || ||||||||||||| ||||||||||||| |||    
T  5833524 tcatgtgcaaatttgcacatgttaaaaagtttaaagcagtaacttcgtcttagaacttgtgcattctatattaaatatgtagctttttaataaatagttg 5833425  T
Q  100 t 100  Q
    |    
T  5833424 t 5833424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 7040261 - 7040371
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaa-atatgtagtttttaataaataattg 99  Q
    ||||||||||||||||||||| |||||||||||||||| ||  ||||| ||||||||||||| ||||  ||||| ||||  | |||||||||||||||||    
T  7040261 tcatgtgcaaatttgcacatgttaagaagtttaaagtactatgtttgatttggaacttgtgtattttctattaatatat-aaatttttaataaataattg 7040359  T
Q  100 ttggttttcaat 111  Q
    ||| ||| ||||    
T  7040360 ttgttttccaat 7040371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 22334030 - 22334097
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgtttttta 68  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||  ||||||||||    
T  22334030 tcatgtgcaaatttgtacatgttaagaagtttaaagtagtaactttgacttgaaacacgtgtttttta 22334097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 33343157 - 33343001
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||||||||||||||||| |||||| |||||| |||||||||||  ||||||||||    ||||  ||||||||| | | |||||  ||||||||||    
T  33343157 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgtattggaacttgaacattttgtattaaatatataactttttgttaaataattg 33343058  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||| ||||||| |||| ||   |||||||||| ||||||||  ||||||||||||||    
T  33343057 ttgg-tttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcaca 33343001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 155
Target Start/End: Complemental strand, 19868245 - 19868126
Alignment:
Q  39 gtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattgttggttttcaatgaaaaattatcacttttagttgcctt 137  Q
    |||| |||| |||| ||||||||| ||||| ||||||||| ||  ||||| ||||||||||| || ||||||||||||| |||  ||||||||||| |||    
T  19868245 gtaagtttgtcttgaaacttgtgtattttatattaaatatataactttttgataaataattggtgtttttcaatgaaaatttactacttttagttgtctt 19868146  T
Q  138 aaca--tgcaatattgcaca 155  Q
    ||||  ||||||||||||||    
T  19868145 aacatgtgcaatattgcaca 19868126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 8595066 - 8595000
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgtttttta 68  Q
    |||||||||||||| |||||| ||||||||||||| |||| ||||| |||||||||||||||||||||    
T  8595066 tcatgtgcaaatttacacatgttaagaagtttaaa-tagtgactttaacttggaacttgtgtttttta 8595000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 46290179 - 46290037
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||||||||||||||||| |||||| |||||| |||||||||||  ||||||||||    ||||  ||||||||| | | |||||  ||||||||||    
T  46290179 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattg 46290080  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    |||| ||||||| |||| ||   |||||||||| ||||||||||    
T  46290079 ttgg-tttcaataaaaacttgctacttttagttaccttaacatg 46290037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 42750452 - 42750301
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    |||| |||||||||||| ||| ||||||||||||||||||| |||||||||     || ||  ||||| ||||||  ||| | ||||||||||||||||     
T  42750452 tcatatgcaaatttgcatatgttaagaagtttaaagtagtagctttgactt-----ttttgcattttatattaaaattgtaactttttaataaataatta 42750358  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaac--atgcaatattgcaca 155  Q
    || ||||||||| |||| |||| | |||||||||| |||||  |||||||||||||||    
T  42750357 tt-gttttcaataaaaagttattatttttagttgctttaacatatgcaatattgcaca 42750301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 8170690 - 8170593
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataatt 98  Q
    |||||| ||||||| |||||| ||| |||||||||||||||||||| ||||  ||||| | ||||||| ||||||||| ||  ||||||| |||||||    
T  8170690 tcatgtacaaatttacacatgttaaaaagtttaaagtagtaactttaacttaaaacttttattttttatattaaatatataacttttaatcaataatt 8170593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 34270430 - 34270278
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||||||||||||||||| |||||| |||||| |||||||||||  ||||||||||    ||||  ||||||||| | | |||||  ||||||||||    
T  34270430 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattg 34270331  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||| ||||||| |||| ||    ||||||||| ||||||||  ||||||||||||||    
T  34270330 ttgg-tttcaataaaaactt----cttttagttaccttaacatgtgcaatattgcaca 34270278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 7899495 - 7899615
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||||||||||||||||| ||| || |||||| | |||| |||| |||  ||||||| | ||||| ||||||||| | |  ||||||||||| ||||    
T  7899495 tcatgtgcaaatttgcacatgttaaaaaatttaaaatggtaagtttgtcttataacttgtatattttatattaaatatataacattttaataaattattg 7899594  T
Q  100 ttggttttcaatgaaaaatta 120  Q
     || |||||||||||||||||    
T  7899595 gtgtttttcaatgaaaaatta 7899615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 8091321 - 8091464
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    |||||||||||||| |||||| ||||||||||||| |||||||||||  ||| ||||| |   ||||   |||||||| | | ||||||||||||||||     
T  8091321 tcatgtgcaaatttacacatgttaagaagtttaaaatagtaactttgcattgtaacttttacattttgtgttaaatatataactttttaataaataatta 8091420  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||| |||||||| |||| ||   |||||||||||| || |||||    
T  8091421 ttgattttcaataaaaatttgctacttttagttgctttgacatg 8091464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 4969942 - 4969883
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 60  Q
    ||||||||||||||||||||| ||||||||||||| ||| || ||||  |||||||||||    
T  4969942 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgt 4969883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 12624798 - 12624688
Alignment:
Q  8 caaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgta-gtttttaataaataattgttggttt 106  Q
    |||||||||||||| |||||| |||||| | |||| |||| |||  ||||||||| ||||| |||||||||  | |||||||||||||||||| |  |||    
T  12624798 caaatttgcacatgttaagaaatttaaaatggtaagtttgtctta-aacttgtgtattttatattaaatatacaagtttttaataaataattgatatttt 12624700  T
Q  107 tcaatgaaaaat 118  Q
    ||||| ||||||    
T  12624699 tcaataaaaaat 12624688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 155
Target Start/End: Complemental strand, 12650907 - 12650833
Alignment:
Q  83 tttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaacatg--caatattgcaca 155  Q
    ||||||||||||||||| | |||||||||||||| |||  | ||||||||| |||||||||  ||||||||||||    
T  12650907 tttttaataaataattggtagttttcaatgaaaagttactatttttagttggcttaacatgtacaatattgcaca 12650833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 26300740 - 26300681
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 60  Q
    |||||| |||||||||||||| ||| ||||||||| |||||||||||| ||| |||||||    
T  26300740 tcatgtacaaatttgcacatgttaaaaagtttaaaatagtaactttgaattgaaacttgt 26300681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 38798080 - 38798156
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 78  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  38798080 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 38798156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 38798218 - 38798294
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 78  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  38798218 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 38798294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 42593404 - 42593480
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 78  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  42593404 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 42593480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 45645535 - 45645459
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 78  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  45645535 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 45645459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 3530123 - 3530265
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttt-taataaataattg 99  Q
    |||||||||||||| |||||  ||||| ||||| | |||||| |||   ||| || |||||  ||||| || |||||| || |||| |||||||||||||    
T  3530123 tcatgtgcaaatttacacatattaagacgtttagaatagtaagtttttattgaaatttgtgcattttatatcaaatatataattttttaataaataattg 3530222  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    || ||||||||| ||||||||| | | ||| |||| ||||||||    
T  3530223 tt-gttttcaataaaaaattattattcttaattgctttaacatg 3530265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 26037262 - 26037203
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 60  Q
    ||||||||||||||||| ||| ||||||||||||| ||| || ||||  |||||||||||    
T  26037262 tcatgtgcaaatttgcagatgttaagaagtttaaaatagaaattttgtattggaacttgt 26037203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 29398143 - 29398202
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 60  Q
    |||||| |||||||||||||| ||||||||||||| ||| || ||||  |||||||||||    
T  29398143 tcatgttcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgt 29398202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 45501628 - 45501569
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 60  Q
    ||||||||||||||||||||  ||||||||||||| ||| || ||||  |||||||||||    
T  45501628 tcatgtgcaaatttgcacatcttaagaagtttaaaatagaaattttgtattggaacttgt 45501569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 820550 - 820584
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaa 35  Q
    ||||||||||||||||||||| |||||||||||||    
T  820550 tcatgtgcaaatttgcacatgttaagaagtttaaa 820584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 32117983 - 32117827
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||||||||||||||||| |||||| |||||||| | || |||  |||| ||||||| | || || ||||||||  | | |||||||| ||||||||    
T  32117983 tcatgtgcaaatttgcacatgttaagaaatttaaagtggcaagtttatcttgaaacttgtatattctatattaaatagataactttttaat-aataattg 32117885  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
     || ||| ||||| ||| ||   || ||||||| ||||||||  ||||||||||||||    
T  32117884 gtgttttccaatgcaaagttgctacatttagtttccttaacatgtgcaatattgcaca 32117827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33072150 - 33072104
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttg 47  Q
    ||||||||||||||| ||||| |||||| |||||| |||||||||||    
T  33072150 tcatgtgcaaatttgtacatgttaagaaatttaaaatagtaactttg 33072104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 26050470 - 26050527
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaactt 58  Q
    ||||||||||||||||||||| |||||| |||||| | |||| |||| |||| |||||    
T  26050470 tcatgtgcaaatttgcacatgttaagaaatttaaaatggtaaatttgtcttgtaactt 26050527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 26059829 - 26059886
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaactt 58  Q
    ||||||||||||||||||||| |||||| |||||| | |||| |||| |||| |||||    
T  26059829 tcatgtgcaaatttgcacatgttaagaaatttaaaatggtaaatttgtcttgtaactt 26059886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 28061333 - 28061418
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttttt 87  Q
    |||||||||||||||||||| |||  |   ||||||||||| |||   ||||||||||||| ||||| ||||||||| || |||||    
T  28061333 catgtgcaaatttgcacatgttaaagatactaaagtagtaagtttatattggaacttgtgtattttacattaaatatatatttttt 28061418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 24699240 - 24699188
Alignment:
Q  65 tttaaattaaatatgtagtttt-taataaataattgttggttttcaatgaaaa 116  Q
    |||| ||||||||||||  ||| |||||||||||||||| |||||||||||||    
T  24699240 tttatattaaatatgtaactttataataaataattgttgtttttcaatgaaaa 24699188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 108
Target Start/End: Original strand, 47707901 - 47708001
Alignment:
Q  9 aaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattgttggtttt 107  Q
    |||||| || ||| ||||||||||||| |||||| ||||| ||| ||||| |   ||||  ||||||||| | | |||||||||||||||||||| ||||    
T  47707901 aaattttcatatgttaagaagtttaaaatagtaattttgaattgaaacttatacattttgtattaaatatataactttttaataaataattgttgttttt 47708000  T
Q  108 c 108  Q
    |    
T  47708001 c 47708001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 122; Significance: 2e-62; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 11611083 - 11610927
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||    
T  11611083 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaacttttaataaataattgt 11610984  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||||||||||||||| |||  |||||||||||||||||||  ||||||||||||||    
T  11610983 tggttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcaca 11610927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 20938226 - 20938069
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgtt-ttttaaattaaatatgtagtttttaataaataattg 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||| ||||||||    
T  20938226 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgtttttttatattaaatatgtaatttttaatcaataattg 20938127  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    || ||||||||| |||| |||| |||||||||| ||||||||  ||||||||||||||    
T  20938126 ttagttttcaataaaaagttattacttttagttaccttaacatgtgcaatattgcaca 20938069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 13495463 - 13495320
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgta-gtttttaataaataattg 99  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||| ||||||||||||||||||    
T  13495463 tcatgtgaaaatttgcacatgataagaagtttaaagtagtaattttgacttggaacttgtgcattttatattaaatatgtaggtttttaataaataattg 13495364  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||| |||||||| ||||||||  |||||||||| ||||||||||    
T  13495363 ttgattttcaataaaaaattactacttttagttaccttaacatg 13495320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 142
Target Start/End: Original strand, 16875037 - 16875175
Alignment:
Q  4 tgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttgg 103  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||| ||||||| || |||||||||    
T  16875037 tgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaaatatgtagcttttaatcaacaattgttgg 16875136  T
Q  104 ttttcaatgaaaaattatcacttttagttgccttaacat 142  Q
    |||||||| ||||||||  |||||||||| |||||||||    
T  16875137 ttttcaataaaaaattactacttttagttaccttaacat 16875175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 3863498 - 3863342
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||| ||||||| ||||||||     
T  3863498 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttagcttggaacttgtgttttttatattaaatatgtagcttttaatcaataattgc 3863399  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    || ||||||||||||| |||  || ||||||| ||||||||  ||||||||||||||    
T  3863398 tgattttcaatgaaaagttactacctttagttaccttaacatgtgcaatattgcaca 3863342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 50364348 - 50364217
Alignment:
Q  12 tttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttcaat 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||| ||||||||||||||||||||    
T  50364348 tttgcacatgctaagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaacttttaatcaataattgttggttttcaat 50364249  T
Q  112 gaaaaattatcacttttagttgccttaacatg 143  Q
     | || |||  |||||||||| |||| |||||    
T  50364248 tataagttactacttttagttacctttacatg 50364217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 29686489 - 29686374
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||| |||| ||| |||||||||||||||||    
T  29686489 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttaacttagaacttgtgttttttatattacatatatagcttttaataaataattgt 29686390  T
Q  101 tggttttcaatgaaaa 116  Q
    || | |||| ||||||    
T  29686389 tgatattcagtgaaaa 29686374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 40497216 - 40497074
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||  ||||| ||||| ||||||| |||||||||| ||||||    
T  40497216 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttaacttagaacttgtgcattttatattaactatgtagatttttaataattaattg 40497117  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    || | ||||||| |||| |||  |||||||||||||||||||||    
T  40497116 tt-gatttcaataaaaagttactacttttagttgccttaacatg 40497074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 38389616 - 38389473
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    ||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||  ||| | ||||||||||||| |||||||||||||| |     
T  38389616 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagtt 38389517  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||| |||||||| ||||||||  |||||||| |  |||||||||    
T  38389516 ttgtttttcaataaaaaattactacttttagatatcttaacatg 38389473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 30 - 155
Target Start/End: Original strand, 54621256 - 54621383
Alignment:
Q  30 tttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatcactttta 129  Q
    |||||| ||||||||||||||||||| |||||||||||| ||||||||||||   |||||| |||||||||||||||| ||||||||||||  |||||||    
T  54621256 tttaaattagtaactttgacttggaagttgtgttttttatattaaatatgtaacatttaatcaataattgttggtttttaatgaaaaattactactttta 54621355  T
Q  130 gttgccttaac--atgcaatattgcaca 155  Q
     || |||||||  |||||||||||||||    
T  54621356 attaccttaacatatgcaatattgcaca 54621383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 24978815 - 24978700
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    |||||| ||| |||||||||| ||| |||||||||||||| || |||||||| ||||||||||||||||||| |||||||| |||||||| ||||||| |    
T  24978815 tcatgtacaagtttgcacatgttaacaagtttaaagtagttacgttgacttgaaacttgtgttttttaaatttaatatgtaatttttaatcaataattat 24978716  T
Q  101 tggttttcaatgaaaa 116  Q
    ||||| ||||| ||||    
T  24978715 tggttctcaataaaaa 24978700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 32553535 - 32553393
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||| |||||| |||||| ||||||||||||| || ||||||| | ||| ||||||||||||||| |||||||||||| | |||||  ||||||| |    
T  32553535 tcatgtgtaaatttacacatgttaagaagtttaaattaataactttaatttgaaacttgtgttttttatattaaatatgtaatatttaactaataattat 32553436  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    || ||||||||||||| |||  ||||||| || ||||||||||    
T  32553435 tgattttcaatgaaaagttactacttttaattaccttaacatg 32553393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 155
Target Start/End: Original strand, 51339249 - 51339349
Alignment:
Q  57 ttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcac 154  Q
    |||||||||||| |||||||| |||| ||||||| |||||||||||||||||||||||||||||  | |||||||| ||||||||  |||||||||||||    
T  51339249 ttgtgttttttatattaaatacgtagcttttaatcaataattgttggttttcaatgaaaaattactatttttagttaccttaacatgtgcaatattgcac 51339348  T
Q  155 a 155  Q
    |    
T  51339349 a 51339349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11611145 - 11611090
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaac 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11611145 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaac 11611090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 46492352 - 46492509
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttt-ttaataaataattg 99  Q
    |||||||||||||| |||| | |||||| ||||||||||||||||||  ||| |||||||   ||||  ||||||||| ||  |  ||||||||||||||    
T  46492352 tcatgtgcaaattttcacacgttaagaaatttaaagtagtaactttgcattgaaacttgtacattttgtattaaatatataactcgttaataaataattg 46492451  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    ||| |||||||| |||| ||| ||||||||||||| ||||||  ||||||||||||||    
T  46492452 ttgtttttcaataaaaacttaccacttttagttgctttaacatgtgcaatattgcaca 46492509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 23523115 - 23523034
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag 82  Q
    ||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||  ||| | |||||||||||||    
T  23523115 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaatatgtag 23523034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 36426418 - 36426535
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    ||||||| |||||| |||||| ||||||||||||||| |||| ||||||||||||||||||  ||| | ||||||||||||| |||||||||||||| |     
T  36426418 tcatgtgtaaatttacacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagtt 36426517  T
Q  100 ttggttttcaatgaaaaa 117  Q
    ||| ||||| || |||||    
T  36426518 ttgtttttcgataaaaaa 36426535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 41151802 - 41151735
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgtttttta 68  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||  ||||||||||||| |||||||    
T  41151802 tcatgtgcaaatttacacatgataagaagtttaaagtagtaatttgaacttggaacttgtatttttta 41151735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 2571437 - 2571281
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||||||||||||||||| |||||| |||||| |||||||||||  ||||||||||    ||||  ||||||||| | | |||||  ||||||||||    
T  2571437 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattg 2571338  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||| ||||||| |||| ||   |||||||||| ||||||||  ||||||||||||||    
T  2571337 ttgg-tttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcaca 2571281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 11 - 133
Target Start/End: Original strand, 38786343 - 38786464
Alignment:
Q  11 atttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttcaa 110  Q
    ||||||||||| ||||||||||||| |||||| ||||| ||| || |||||  ||||| | ||||| |||| |||||||||||||||||||  |||||||    
T  38786343 atttgcacatgttaagaagtttaaaatagtaattttgatttgaaatttgtggattttatactaaatgtgtattttttaataaataattgtt-attttcaa 38786441  T
Q  111 tgaaaaattatcacttttagttg 133  Q
    | ||||||||  | |||||||||    
T  38786442 taaaaaattactatttttagttg 38786464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 51618216 - 51618062
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||| |||||||||| || | |||||||||  |||||||||||   ||||  ||||||||| ||  |||||||||||||||||    
T  51618216 tcatgtgcaaatttgcacatgttaagaagtttcaaattgtaactttgcattggaacttgtacattttgtattaaatatata--ttttaataaataattgt 51618119  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    || |||||| | |||| ||    ||||||||||  ||||||  ||||||||||||||    
T  51618118 tgtttttcagtaaaaacttgctgcttttagttgttttaacatgtgcaatattgcaca 51618062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 37055375 - 37055517
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat-gtagtttttaataaataattg 99  Q
    ||||||| ||||||||||||  ||||||||||||| ||||||  |||  | ||||||||||||||||| ||||| |||   | |||||||||||||||||    
T  37055375 tcatgtgaaaatttgcacatattaagaagtttaaaatagtaaagttgtatcggaacttgtgttttttatattaactataaaactttttaataaataattg 37055474  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacat 142  Q
    ||  ||||||||| ||| |||  | |||||||| | |||||||    
T  37055475 ttctttttcaatgtaaagttactatttttagttcctttaacat 37055517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 10307935 - 10307779
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||||||||||||||||| |||||| |||||| |||||| ||||  ||||||||||    ||||  ||||||||| | | |||||  ||||||||||    
T  10307935 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaaatttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattg 10307836  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||| ||||||| |||| ||   |||||||||| ||||| ||  ||||||||||||||    
T  10307835 ttgg-tttcaataaaaatttgctacttttagttaccttatcatgtgcaatattgcaca 10307779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 23638058 - 23638215
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat-gtagtttttaataaataattg 99  Q
    ||||| ||||||||||||||| |||||| |||||| | |||| || | |||| ||||||||| ||||| |||||||||   | |||||| ||||||||||    
T  23638058 tcatgagcaaatttgcacatgttaagaaatttaaaatggtaagttagtcttgaaacttgtgtattttatattaaatatacaactttttattaaataattg 23638157  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg--caatattgcaca 155  Q
     || ||||||||  ||| |||  ||||| ||||  |||||||||  ||||||||||||    
T  23638158 atgtttttcaatagaaagttactactttaagttaacttaacatgcacaatattgcaca 23638215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 23803055 - 23803165
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat-gtagtttttaataaataattg 99  Q
    |||| |||||||||||||||| ||||||||||||| ||| || ||||  ||||||||||| | ||| | |||||||||   | |||| ||||||||||||    
T  23803055 tcatatgcaaatttgcacatgttaagaagtttaaaatagaaattttgcattggaacttgtatatttcatattaaatataaaacttttgaataaataattg 23803154  T
Q  100 ttggttttcaa 110  Q
    ||| |||||||    
T  23803155 ttgtttttcaa 23803165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 39364879 - 39364955
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaata 77  Q
    |||| |||||||||||||||| ||| |||||| || ||||||||||| |||| ||||||||  ||||| ||||||||    
T  39364879 tcatttgcaaatttgcacatgttaacaagttttaaatagtaactttgtcttgtaacttgtgcattttatattaaata 39364955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 36812419 - 36812380
Alignment:
Q  9 aaatttgcacatgataagaagtttaaagtagtaactttga 48  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  36812419 aaatttgcacatgttaagaagtttaaagtagtaactttga 36812380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 155
Target Start/End: Original strand, 46845532 - 46845606
Alignment:
Q  83 tttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||||||||||||||||||| |||||||| |||||||   |||||||||||| |||| |  ||||||||||||||    
T  46845532 tttttaataaataattgttgattttcaataaaaaatttctacttttagttgctttaagatgtgcaatattgcaca 46845606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 1569215 - 1569319
Alignment:
Q  17 acatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattgttggttttcaatgaaa 115  Q
    ||||| ||||||||||||| || ||||||||  |||||||||||   ||||| |||| |||||| | ||| |||||||| ||||||| |||| ||| |||    
T  1569215 acatgttaagaagtttaaaataataactttgtattggaacttgttcattttatattagatatgtaactttctaataaattattgttgttttttaataaaa 1569314  T
Q  116 aatta 120  Q
    |||||    
T  1569315 aatta 1569319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 29932362 - 29932438
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 78  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  29932362 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 29932438  T

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Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 29981516 - 29981592
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 78  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  29981516 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 29981592  T

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Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 8165815 - 8165756
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 60  Q
    ||||||||||||||||||||| ||||||||||||| ||  || ||||  |||||||||||    
T  8165815 tcatgtgcaaatttgcacatgttaagaagtttaaaatataaattttgtattggaacttgt 8165756  T

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Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 83 - 155
Target Start/End: Original strand, 24569329 - 24569403
Alignment:
Q  83 tttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaacatg--caatattgcaca 155  Q
    ||||||||||||||||| || |||||||| |||| |||| | || |||||| |||||||||  ||||||||||||    
T  24569329 tttttaataaataattgatgtttttcaataaaaagttattatttgtagttgtcttaacatgtccaatattgcaca 24569403  T

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Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 30214098 - 30214156
Alignment:
Q  79 gtagtttttaataaataattgttggttttcaatgaaaaattatcacttttagttgcctta 138  Q
    |||| ||||||||||||||||||| ||||||||||||| ||| |  ||||||||||||||    
T  30214098 gtagcttttaataaataattgttgattttcaatgaaaagtta-ctattttagttgcctta 30214156  T

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Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 35414818 - 35414929
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    |||||||||||||| |||||| ||||||||| ||| ||||||||||   |||||| |||| | ||||  ||| ||||| | | |||| || |||||||||    
T  35414818 tcatgtgcaaatttacacatgttaagaagttcaaaatagtaactttatattggaagttgtatattttgtatttaatatataacttttgaacaaataattg 35414917  T
Q  100 ttggttttcaat 111  Q
    ||| ||||||||    
T  35414918 ttgtttttcaat 35414929  T

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Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 83 - 155
Target Start/End: Complemental strand, 37444232 - 37444159
Alignment:
Q  83 tttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||||||||| ||||||||| ||| |||| |||| |||  |||||||||||||||||||  ||||||||||||||    
T  37444232 tttttaataattaattgttgattt-caataaaaagttactacttttagttgccttaacatgtgcaatattgcaca 37444159  T

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Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 50204572 - 50204517
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaac 56  Q
    ||||||||||||||||||||| ||||||||||||| ||| || ||||  |||||||    
T  50204572 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaac 50204517  T

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Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 40930220 - 40930186
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaa 35  Q
    ||||||||||||||||||||| |||||||||||||    
T  40930220 tcatgtgcaaatttgcacatgttaagaagtttaaa 40930186  T

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Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 49396548 - 49396502
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttga 48  Q
    |||||||||||||| ||||  |||||||||||||||||||| |||||    
T  49396548 catgtgcaaatttgtacatattaagaagtttaaagtagtaaatttga 49396502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 51401607 - 51401550
Alignment:
Q  3 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 60  Q
    |||| |||||||||||||| ||||||||||||| ||| || ||||  |||||||||||    
T  51401607 atgtacaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgt 51401550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 23320210 - 23320122
Alignment:
Q  30 tttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattgttggttttcaatgaaaaa 117  Q
    |||||| | |||| |||| |||| |||| |||| ||||| ||||||||| ||  ||||||||||||||||| || |||||||| |||||    
T  23320210 tttaaaatggtaaatttgtcttgaaactcgtgtattttatattaaatatatatctttttaataaataattgatgtttttcaataaaaaa 23320122  T

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Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 101
Target Start/End: Original strand, 26486439 - 26486487
Alignment:
Q  54 aacttgtgttttttaaattaaatatgtagtttt-taataaataattgtt 101  Q
    ||||||||| ||||| ||||||||| ||||||| |||||||||||||||    
T  26486439 aacttgtgtattttatattaaatatatagttttttaataaataattgtt 26486487  T

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Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 33474482 - 33474514
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagttta 33  Q
    ||||||||||||||||||||| |||||||||||    
T  33474482 tcatgtgcaaatttgcacatgttaagaagttta 33474514  T

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Target: chr2 (Bit Score: 122; Significance: 2e-62; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 27665053 - 27665209
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||    
T  27665053 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaacttttaataaataattgt 27665152  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||||||||||||||| |||  |||||||||||||||||||  ||||||||||||||    
T  27665153 tggttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcaca 27665209  T

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Target: chr2; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 165 - 347
Target Start/End: Complemental strand, 5583130 - 5582960
Alignment:
Q  165 ttgaagaaattagcttttatagttttatagcattagnnnnnnnnnnnnngtttagttaataatgtaacttgccaaaaacccatctttcttaaactcaaac 264  Q
    ||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5583130 ttgaagaaattagcttttatagttttatagcattagtatatat------gtttagttaataatgtaacttgccaaaaacccatctttcttaaactcaaac 5583037  T
Q  265 tcaaactcagcatcaatatcttgttcttggttggttccttaattattatctggatttattagcttcattagattttcttctta 347  Q
    |||      ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5583036 tca------gcatcgatatcttgttcttggttggttccttaattattatctggatttattagcttcattagattttcttctta 5582960  T

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Target: chr2; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 16126568 - 16126724
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  16126568 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaaatatgtagcttttaatcaataattgt 16126667  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    ||||||||||||||||||||  |||||||||| ||||||||  ||||||||||||||    
T  16126668 tggttttcaatgaaaaattactacttttagttaccttaacatgtgcaatattgcaca 16126724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 19228594 - 19228438
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||||||    
T  19228594 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaacttttaatcaataattgt 19228495  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||||||||||||||| |||  |||||||||| ||||||||  ||||||||||||||    
T  19228494 tggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcaca 19228438  T

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Target: chr2; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 14377593 - 14377438
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||  |||||| ||||||||||    
T  14377593 tcatgtgcaaatttgtacatgataagaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaatatgtaacttttaacaaataattgt 14377494  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcac 154  Q
    ||||||||||| |||| |||  |||||||||||||||||||  |||||||||||||    
T  14377493 tggttttcaataaaaagttactacttttagttgccttaacatgtgcaatattgcac 14377438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 4821443 - 4821330
Alignment:
Q  3 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttg 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  4821443 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgatttgaaacttgtgttttttatattaaatatgtagcttttaataaataattgttg 4821344  T
Q  103 gttttcaatgaaaa 116  Q
    ||||||||||||||    
T  4821343 gttttcaatgaaaa 4821330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 12016835 - 12016679
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  12016835 tcatgtgcaaatttgcacatattaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgtagcttttaatcaataattgt 12016736  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    ||||||||||| |||| |||  |||||||||| ||||||||  ||||||||||||||    
T  12016735 tggttttcaataaaaagttactacttttagttaccttaacatgtgcaatattgcaca 12016679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 16919163 - 16919319
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||  ||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||  ||||||| |||||||||    
T  16919163 tcatgtgcaaatttgcacatattaacaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaatatgtaacttttaatcaataattgt 16919262  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    ||||||||||  |||| |||  |||||||||| ||||||||  ||||||||||||||    
T  16919263 tggttttcaacaaaaagttactacttttagttaccttaacatgtgcaatattgcaca 16919319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 3 - 155
Target Start/End: Complemental strand, 22705621 - 22705467
Alignment:
Q  3 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttg 102  Q
    ||||||||||||||||||  |||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||  ||| ||| |||||||||||    
T  22705621 atgtgcaaatttgcacattttaagaagtttaaagtagtaattttaacttgaaacttgtgttttttatattaaatatgtaactttaaattaataattgttg 22705522  T
Q  103 gttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||||||||||||| |||  |||||||||| ||||||||  ||||||||||||||    
T  22705521 gttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcaca 22705467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 7 - 155
Target Start/End: Original strand, 13351226 - 13351377
Alignment:
Q  7 gcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttt 106  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||  ||||||| ||||||||||| |||    
T  13351226 gcaaatttgcacatgttaagaagtttaaagtagtaactttgacttagaacttgtgttttttatatttaatatgtaacttttaattaataattgttgattt 13351325  T
Q  107 tcaatgaaaaattatc-acttttagttgccttaaca--tgcaatattgcaca 155  Q
    ||||| ||||| || | |||||||||| ||||||||  ||||||||||||||    
T  13351326 tcaataaaaaaataactacttttagttaccttaacatgtgcaatattgcaca 13351377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 16123447 - 16123290
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||| ||||||||||||   |||||| || ||||||    
T  16123447 tcatgtgcaaatttgcacatgataagaagtttaaattagtaattttgattaggaacttgtgttttttatattaaatatgtaacatttaatcaacaattgt 16123348  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcacag 156  Q
    | |||||||||||||| |||   ||||||||| ||||||||  |||||||||||||||    
T  16123347 ttgttttcaatgaaaagttacttcttttagttaccttaacatgtgcaatattgcacag 16123290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 2060053 - 2060187
Alignment:
Q  3 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattgtt 101  Q
    |||||||||||| |||||| |||||| ||||||||||||||||| |||||||| |||||| ||||| ||||||||||||| | |||||||||||||||||    
T  2060053 atgtgcaaatttacacatgttaagaaatttaaagtagtaactttaacttggaatttgtgtcttttatattaaatatgtagctctttaataaataattgtt 2060152  T
Q  102 ggttttcaatgaaaaattatcacttttagttgcct 136  Q
    | |||| |||||||| |||| ||||||||||||||    
T  2060153 gatttttaatgaaaagttattacttttagttgcct 2060187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 8770895 - 8771032
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||| || || ||||||||| ||||||||||||  |||||||||||||||||    
T  8770895 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaattttgacttgaaatttttgttttttatattaaatatgtaacttttaataaataattgt 8770994  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaa 139  Q
    ||||||| | |||||| |||  || ||||||||||||||    
T  8770995 tggtttttattgaaaagttactac-tttagttgccttaa 8771032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 2 - 155
Target Start/End: Original strand, 15411632 - 15411788
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattgt 100  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| |||| |||||||   ||||| ||||||||||||| |||||||||||| |||||    
T  15411632 catgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgtcttgaaacttgttcattttatattaaatatgtagctttttaataaattattgt 15411731  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    || |||||||| ||||||||  |||||||||| | ||||||  ||||||||||||||    
T  15411732 tgtttttcaataaaaaattactacttttagttactttaacatgtgcaatattgcaca 15411788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 39904074 - 39904213
Alignment:
Q  18 catgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttcaatgaaaaa 117  Q
    |||| |||||||||||||||||||| ||| ||||||||||| ||||||||| |||||| |||||| ||||||| ||||||||||| |||||||||||||     
T  39904074 catgttaagaagtttaaagtagtaaatttaacttggaacttatgttttttatattaaacatgtagcttttaatcaataattgttgattttcaatgaaaag 39904173  T
Q  118 ttatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||  |||||||||| ||||||||  ||||||||||||||    
T  39904174 ttactacttttagttaccttaacatgtgcaatattgcaca 39904213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 155
Target Start/End: Original strand, 26229864 - 26230018
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgtt 101  Q
    ||||||||||||||  || | ||||||||||||| |||||||||||||||  || || | ||||||| ||||||||||||  ||||||| ||||||||||    
T  26229864 catgtgcaaatttgtccaggttaagaagtttaaaatagtaactttgacttaaaatttatattttttatattaaatatgtaacttttaatcaataattgtt 26229963  T
Q  102 ggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||||| ||| ||||||||  |||||||||| ||||||||  ||||||||||||||    
T  26229964 ggtttt-aataaaaaattactacttttagttaccttaacatgtgcaatattgcaca 26230018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 15231998 - 15231883
Alignment:
Q  3 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattgtt 101  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||  ||||||||  ||| | ||||||||||| | |||||||||||||| | ||    
T  15231998 atgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttaaaacttgtgcatttcatattaaatatgtaactttttaataaataagtttt 15231899  T
Q  102 ggttttcaatgaaaaa 117  Q
    | |||||||| |||||    
T  15231898 gtttttcaataaaaaa 15231883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 41492150 - 41492279
Alignment:
Q  9 aaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttc 108  Q
    |||||||||||||||||||||||||||||| ||||||| ||||| ||||||||  ||||  |||||||||| ||||||| | |||||||||||  |||||    
T  41492150 aaatttgcacatgataagaagtttaaagtaataactttaacttgaaacttgtgcattttttattaaatatgaagtttttta-aaataattgttctttttc 41492248  T
Q  109 aatgaaaaattatcacttttagttgccttaa 139  Q
    ||| | ||| ||| ||||||| || ||||||    
T  41492249 aataataaaatattacttttaatttccttaa 41492279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 37 - 155
Target Start/End: Complemental strand, 10690915 - 10690795
Alignment:
Q  37 tagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatcacttttagttgcct 136  Q
    |||||| ||| | ||| ||||| ||||||||| ||||||||||||| ||||||| |||||||||||||||| ||||||||||||  | ||||||||  ||    
T  10690915 tagtaattttaatttgaaacttatgttttttatattaaatatgtagcttttaatcaataattgttggtttttaatgaaaaattactaattttagttaact 10690816  T
Q  137 taaca--tgcaatattgcaca 155  Q
    |||||  ||||||||||||||    
T  10690815 taacatgtgcaatattgcaca 10690795  T

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Target: chr2; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 117
Target Start/End: Original strand, 37471757 - 37471866
Alignment:
Q  9 aaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattgttggtttt 107  Q
    ||||||||||||| ||||||||||||| ||||||||||| |||| |||||||   ||||| ||||||||||||| |||||||||||| |||||||  |||    
T  37471757 aaatttgcacatgttaagaagtttaaaatagtaactttgtcttgaaacttgttcattttatattaaatatgtagttttttaataaattattgttgtcttt 37471856  T
Q  108 caatgaaaaa 117  Q
    |||| |||||    
T  37471857 caataaaaaa 37471866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 9747486 - 9747354
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    |||||||||||||| |||||| ||||||||||||| |||||| |||| ||||||||||||   ||||| ||||||||||||| ||||| | ||||| |||    
T  9747486 tcatgtgcaaattttcacatgttaagaagtttaaaatagtaattttgtcttggaacttgttcattttatattaaatatgtagcttttttacaaatagttg 9747387  T
Q  100 ttggttttcaatgaaaaattatcacttttagtt 132  Q
    ||| |||||||| || | |||  ||||||||||    
T  9747386 ttgtttttcaataaatagttactacttttagtt 9747354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 45062367 - 45062225
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||||||||||||||||  ||||||||| ||| ||||||||||   ||||||||||||  ||||| |||||| |||| | ||||||||||||||||     
T  45062367 tcatgtgcaaatttgcacatattaagaagttcaaaatagtaactttattttggaacttgtgcattttatattaaacatgtaactttttaataaataattt 45062268  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacat 142  Q
    ||| |||| ||| |||| ||| |||||||| |||  |||||||    
T  45062267 ttgttttttaataaaaagttaccacttttaattgttttaacat 45062225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 9450426 - 9450315
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    |||||||||||| |||||||| |||||| ||||||||||||  ||||  |||||| |||||| ||||  ||||||||| | | |||||||||||||||||    
T  9450426 tcatgtgcaaatctgcacatgttaagaaatttaaagtagtatgtttgtattggaatttgtgtattttctattaaatatataattttttaataaataattg 9450327  T
Q  100 ttggttttcaat 111  Q
    ||| ||||||||    
T  9450326 ttgtttttcaat 9450315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 12919359 - 12919517
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    |||||||||||||| |||||| ||| || |||||| ||||||||||  |||| |||||||   ||||| ||||||||||||| |||||||||||| ||||    
T  12919359 tcatgtgcaaatttacacatgttaaaaaatttaaaatagtaactttatcttgaaacttgttcattttatattaaatatgtagttttttaataaattattg 12919458  T
Q  100 ttggttttcaat-gaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
     |  ||||||||  ||||||||  ||||||| |||| ||||||  ||||||||||||||    
T  12919459 ctacttttcaataaaaaaattaatacttttaattgctttaacatgtgcaatattgcaca 12919517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 20566026 - 20566137
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagt-ttttaataaataattg 99  Q
    |||||||||||||| |||||| |||||||||||||||| ||  ||||  ||||||||||||| ||||  ||||||||  || | ||||||||||||||||    
T  20566026 tcatgtgcaaatttacacatgttaagaagtttaaagtattatgtttgtattggaacttgtgtattttttattaaatagataatattttaataaataattg 20566125  T
Q  100 ttggttttcaat 111  Q
    ||| ||||||||    
T  20566126 ttgtttttcaat 20566137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 155
Target Start/End: Original strand, 12438727 - 12438813
Alignment:
Q  70 attaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaac--atgcaatattgcaca 155  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||| |||| | ||||||||| || |||  |||||||||||||||    
T  12438727 attaaatatatagtttttaataaataattgttggtttt-aatgaaaagttattatttttagttgtctgaacatatgcaatattgcaca 12438813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 7757795 - 7757937
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    |||||||||||||| |||||| |||||| |||||| |||||||||||  ||||||||||    ||||  ||||||||| | | |||||  ||||||||||    
T  7757795 tcatgtgcaaatttacacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattg 7757894  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    |||||||| ||| |||| || | |||||||||| ||||||||||    
T  7757895 ttggtttt-aataaaaacttgttacttttagttaccttaacatg 7757937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 285 - 347
Target Start/End: Complemental strand, 5573747 - 5573685
Alignment:
Q  285 ttgttcttggttggttccttaattattatctggatttattagcttcattagattttcttctta 347  Q
    |||||||||||||||||||||||||| |||||||||   ||||||||||||| ||||||||||    
T  5573747 ttgttcttggttggttccttaattatcatctggattctgtagcttcattagactttcttctta 5573685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 5583567 - 5583723
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||| ||||||||||||||| |||||| |||||| |||||||||||  ||||||||||    ||||  ||||||||| | | |||||  ||||||||||    
T  5583567 tcatgcgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattg 5583666  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||| ||||||| |||| ||   |||||||||| ||||||||  ||||||||||||||    
T  5583667 ttgg-tttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcaca 5583723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 54 - 143
Target Start/End: Original strand, 22162139 - 22162228
Alignment:
Q  54 aacttgtgttttttaaattaaatatgtag-tttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||||||||  ||||| ||||| ||||||| |||||||||| ||||||||||||| |||| |||| |||  |||||||||||||||||||||    
T  22162139 aacttgtgcattttatattaactatgtagatttttaataattaattgttggttt-caataaaaagttactacttttagttgccttaacatg 22162228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 23932734 - 23932577
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat-gtagtttttaataaataattg 99  Q
    ||||||||||||||||| ||  ||||||||||||| ||||||  |||  | ||||||||||  ||||| ||||| |||   | |||||||||||||||||    
T  23932734 tcatgtgcaaatttgcatatattaagaagtttaaaatagtaaaattgtatcggaacttgtgcattttatattaactataaaactttttaataaataattg 23932635  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    ||  ||||||||| ||| |||  | |||||||| | ||||||  ||||||||||||||    
T  23932634 ttctttttcaatgtaaagttactatttttagttcctttaacatgtgcaatattgcaca 23932577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 29157838 - 29157915
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 78  Q
    ||||||||||||||||||||| |||||| ||| || |||||||||||  ||||||||||| | ||||  |||||||||    
T  29157838 tcatgtgcaaatttgcacatgttaagaaattttaaatagtaactttgcattggaacttgtatattttgtattaaatat 29157915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 35729285 - 35729188
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 98  Q
    ||||| |||||||||||||| | ||||||||||||||| || |||   ||||||||||||| ||||| | ||||||| | | ||||||||||||||||    
T  35729285 catgtacaaatttgcacatgttgagaagtttaaagtagcaaatttatattggaacttgtgtattttatagtaaatatataaatttttaataaataatt 35729188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 24729586 - 24729702
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||||||||||||||||| |||||| |||||| |||||||||||  |||||| |||| | ||||  ||||| ||  | | ||||||||||||||||     
T  24729586 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaatttgtatattttgtattaattacataactttttaataaataatta 24729685  T
Q  100 ttggttttcaatgaaaa 116  Q
    ||  |||||||| ||||    
T  24729686 tttattttcaataaaaa 24729702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 25998094 - 25998154
Alignment:
Q  83 tttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    |||||||||||||||||||| |||||||| |||| || |||||||||||| | ||||||||    
T  25998094 tttttaataaataattgttgtttttcaataaaaagttttcacttttagttactttaacatg 25998154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 155
Target Start/End: Original strand, 43388858 - 43388932
Alignment:
Q  83 tttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||||||||||||||||||| |||||||| |||||||   |||||||||||| |||| |  ||||||||||||||    
T  43388858 tttttaataaataattgttgattttcaataaaaaatttctacttttagttgctttaagatgtgcaatattgcaca 43388932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 43941864 - 43941949
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttttt 87  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| ||||||||| || |||||    
T  43941864 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatatatatttttt 43941949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 3286663 - 3286587
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 78  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  3286663 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 3286587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 143
Target Start/End: Original strand, 34213961 - 34214103
Alignment:
Q  4 tgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag---tttttaataaataattgt 100  Q
    |||||||||||||||||| |||||| |||||| |||||| |||   ||||||||||    ||||  |||||| || ||    ||||||  ||||||||||    
T  34213961 tgtgcaaatttgcacatgttaagaaatttaaaatagtaatttttcattggaacttgaacattttttattaaaaatatataactttttataaaataattgt 34214060  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||||||||||| |||| |||  | |||||||||| ||||||||    
T  34214061 tggttttcaataaaaacttactatttttagttgctttaacatg 34214103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 6109558 - 6109523
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaag 36  Q
    ||||||||||||||||||||| ||||||||||||||    
T  6109558 tcatgtgcaaatttgcacatgttaagaagtttaaag 6109523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 38248429 - 38248536
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||||||||||||||||| |||||| |||||| |||||| |||   ||||||||||    ||||  ||||||||| | | |||||  ||||||||||    
T  38248429 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaattttacattggaacttgaacattttgtattaaatatataattttttgttaaataattg 38248528  T
Q  100 ttggtttt 107  Q
    ||||||||    
T  38248529 ttggtttt 38248536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 8065292 - 8065258
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaa 35  Q
    ||||||||||||||||||||| |||||||||||||    
T  8065292 tcatgtgcaaatttgcacatgttaagaagtttaaa 8065258  T

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Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 26003355 - 26003389
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaa 35  Q
    ||||||||||||||||||||| |||||||||||||    
T  26003355 tcatgtgcaaatttgcacatgttaagaagtttaaa 26003389  T

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Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 142
Target Start/End: Original strand, 27865905 - 27865965
Alignment:
Q  81 agtttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaacat 142  Q
    |||||||||||| | ||||||| |||||||| ||||||||| |||||||||| | |||||||    
T  27865905 agtttttaataattgattgttgtttttcaat-aaaaattattacttttagtttctttaacat 27865965  T

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Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 3951418 - 3951342
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 78  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||| ||||||||| ||||| |||||||||    
T  3951418 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattgaaacttgtgtattttacattaaatat 3951342  T

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Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 5853472 - 5853504
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagttta 33  Q
    ||||||||||||||||||||| |||||||||||    
T  5853472 tcatgtgcaaatttgcacatgttaagaagttta 5853504  T

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Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 8847955 - 8847879
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 78  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||| ||||||||| ||||| |||||||||    
T  8847955 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattgaaacttgtgtattttacattaaatat 8847879  T

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Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 16493541 - 16493573
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagttta 33  Q
    ||||||||||||||||||||| |||||||||||    
T  16493541 tcatgtgcaaatttgcacatgttaagaagttta 16493573  T

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Target: chr1 (Bit Score: 118; Significance: 4e-60; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 39150336 - 39150492
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||  |||||||||||||||||    
T  39150336 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaatttgtgttttttatattaaatatgtaacttttaataaataattgt 39150435  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||||||||||||||| |||  |||||||||||||||||||  ||||||||||||||    
T  39150436 tggttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcaca 39150492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 17919622 - 17919466
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||  |||||||||||||||||    
T  17919622 tcatgtgcaaatttgcacataataagaagtttaaagtagtaactttgacttggaatttgtgttttttatattaaatatgtaacttttaataaataattgt 17919523  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaacatg--caatattgcaca 155  Q
    |||||||||||||||| |||  |||||||||||||||||||||  ||||||||||||    
T  17919522 tggttttcaatgaaaagttactacttttagttgccttaacatgtacaatattgcaca 17919466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 313918 - 313762
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  313918 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagcttttaatcaataattgt 313819  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    ||||||||||| ||||||||  |||||||||| ||||||||  ||||||||||||||    
T  313818 tggttttcaatcaaaaattactacttttagttaccttaacatgtgcaatattgcaca 313762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 6569994 - 6570109
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  6569994 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagcttttaatcaataattgt 6570093  T
Q  101 tggttttcaatgaaaa 116  Q
    ||||||||||||||||    
T  6570094 tggttttcaatgaaaa 6570109  T

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Target: chr1; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 39930812 - 39930941
Alignment:
Q  3 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttg 102  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||| |||| |||||||||||||||||||||||| ||     
T  39930812 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttaacttgaaacttgtattttttatattatatatgtagtttttaataaataattattt 39930911  T
Q  103 gttttcaatgaaaaattatcacttttagtt 132  Q
    ||||||||||||||||||  ||||||||||    
T  39930912 gttttcaatgaaaaattactacttttagtt 39930941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 30288873 - 30288992
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    |||||||||||||| |||||| |||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  30288873 tcatgtgcaaatttacacatgttaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgtagcttttaatcaataattgt 30288972  T
Q  101 tggttttcaatgaaaaatta 120  Q
    ||||||||||||||||||||    
T  30288973 tggttttcaatgaaaaatta 30288992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 6754640 - 6754484
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||| ||||||| |||||||||| ||||||    
T  6754640 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgtagatttttaataattaattg 6754541  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||| ||||||| |||| |||  | |||||||||||||||||  ||||||||||||||    
T  6754540 ttgg-tttcaataaaaagttactatttttagttgccttaacatgtgcaatattgcaca 6754484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 44918193 - 44918037
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    |||||||||||||| |||||| |||||| ||||||||||||||||| | ||||||||| ||||||||| ||||||||||||| ||||||| |||||||||    
T  44918193 tcatgtgcaaatttacacatgttaagaaatttaaagtagtaactttaatttggaacttatgttttttatattaaatatgtagcttttaatcaataattgt 44918094  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    || |||||||| |||| |||  |||||||||| ||||||||  ||||||||||||||    
T  44918093 tgattttcaataaaaatttactacttttagttaccttaacatgtgcaatattgcaca 44918037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 30363004 - 30363147
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgta-gtttttaataaataattg 99  Q
    ||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||  ||||| |||||||||||| ||||||||||| ||||||    
T  30363004 tcatgtgcaaatttgcacatgataacaaatttaaaatagtaactttgacttggaacttgtgcattttatattaaatatgtaggtttttaataattaattg 30363103  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    |||||||||||| |||| |||  | ||||||| |||||||||||    
T  30363104 ttggttttcaataaaaagttactatttttagtagccttaacatg 30363147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 4 - 155
Target Start/End: Complemental strand, 8062370 - 8062217
Alignment:
Q  4 tgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttgg 103  Q
    |||||||||||||||||| ||| |||||||||||||||||||| | ||| || || ||||||||| ||||||||| ||||||||||| |||||||||||     
T  8062370 tgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttaatttgaaatttatgttttttatattaaatatatagtttttaatcaataattgttga 8062271  T
Q  104 ttttcaatgaaaaattatcacttttagttgccttaacatg--caatattgcaca 155  Q
    ||||||||||||| |||  |||||||||| ||||||||||  ||||||||||||    
T  8062270 ttttcaatgaaaagttactacttttagttaccttaacatgttcaatattgcaca 8062217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 41624998 - 41624842
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||| ||||| ||||||| |||||||||| ||||||    
T  41624998 tcatgtgcaaatttgcatatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgtagatttttaataattaattg 41624899  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||| ||||||| |||| |||  | |||||||||| ||||||  ||||||||||||||    
T  41624898 ttgg-tttcaataaaaagttactatttttagttgctttaacatgtgcaatattgcaca 41624842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 30172048 - 30171905
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||  ||| | ||||||||||||| |||||||||||||| |     
T  30172048 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagtt 30171949  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||| |||||||| ||||||||  |||||||| || |||||||||    
T  30171948 ttgtttttcaataaaaaattactacttttagatgtcttaacatg 30171905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 30187589 - 30187446
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||  ||| | ||||||||||||| |||||||||||||| |     
T  30187589 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagtt 30187490  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||| |||||||| ||||||||  |||||||| || |||||||||    
T  30187489 ttgtttttcaataaaaaattactacttttagatgtcttaacatg 30187446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 52833491 - 52833600
Alignment:
Q  11 atttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttcaa 110  Q
    ||||||||||||||||||||||||| |||||| ||||||||| || ||||| |||||| | ||||||||||| |||||||||||||||||| ||||||||    
T  52833491 atttgcacatgataagaagtttaaaatagtaattttgacttgaaatttgtgatttttataataaatatgtagcttttaataaataattgtttgttttcaa 52833590  T
Q  111 tgaaaaatta 120  Q
    ||||||||||    
T  52833591 tgaaaaatta 52833600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 24 - 155
Target Start/End: Original strand, 32716195 - 32716328
Alignment:
Q  24 aagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatca 123  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||| ||||||||||||   |||||| |||||||||| |||||||| ||||| |||       
T  32716195 aagaagtttaaagtagtaattttgattaggaacttgtgttttttatattaaatatgtaacatttaatcaataattgtttgttttcaacgaaaagttactt 32716294  T
Q  124 cttttagttgccttaaca--tgcaatattgcaca 155  Q
    | ||||||| ||||||||  ||||||||||||||    
T  32716295 catttagttaccttaacatgtgcaatattgcaca 32716328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 34802136 - 34801994
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    ||||||||||||||||||||| ||||||||||||| | |||| |||| | |||||||||||  ||| | ||||||||||||| |||||||||||||| |     
T  34802136 tcatgtgcaaatttgcacatgttaagaagtttaaaatggtaattttgtc-tggaacttgtgcatttcatattaaatatgtagttttttaataaataagtt 34802038  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||| |||||||| ||||||||  |||||||| |  |||||||||    
T  34802037 ttgtttttcaataaaaaattactacttttagatatcttaacatg 34801994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 36490948 - 36490805
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||  |||||||||||   ||||  ||| ||||| | | |||||||||||||||||    
T  36490948 tcatgagcaaatttgcacatgttaagaagtttaaaatagtaactttgcattggaacttgtacattttgtatttaatatataactttttaataaataattg 36490849  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||| |||||||| |||| |||  ||||||| |||| ||||||||    
T  36490848 ttgtttttcaataaaaacttactacttttaattgctttaacatg 36490805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 10896522 - 10896446
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaata 77  Q
    ||||||| ||| ||||||||| |||||||||||||||||||||||| |||| |||||||||||||||| ||||||||    
T  10896522 tcatgtgtaaaattgcacatgttaagaagtttaaagtagtaactttaactttgaacttgtgttttttatattaaata 10896446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 145
Target Start/End: Original strand, 21854139 - 21854271
Alignment:
Q  14 tgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgta-gtttttaataaataattgttggttttcaatg 112  Q
    |||||||| ||| ||||||||||| ||||||||||||||||||||||   ||||| |||||||| |||  |||| ||||||||| ||||| ||||||||     
T  21854139 tgcacatgttaaaaagtttaaagtggtaactttgacttggaacttgtacattttatattaaataggtatcttttaaataaataaatgttgtttttcaatt 21854238  T
Q  113 aaaaattatcacttttagttgccttaacatgca 145  Q
    ||||||||  |||||||| |  |||||||||||    
T  21854239 aaaaattactacttttagatatcttaacatgca 21854271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 22167504 - 22167361
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttttt-aataaataattg 99  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||  |||||||||||   ||| | |||||||||  | ||||| ||||||||||||    
T  22167504 tcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttgtattggaacttgtacatttaatattaaatataaattttttgaataaataattg 22167405  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||| |||||||  |||| |||  ||| |||||||  ||||||||    
T  22167404 ttgtttttcaagaaaaagttactactattagttgttttaacatg 22167361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 116
Target Start/End: Original strand, 31100952 - 31101058
Alignment:
Q  11 atttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattgttggttttca 109  Q
    ||||||||||  |||||| |||||||| |||||||||||||  ||||||||  ||||| ||||||||||| | |||||||||||||| ||||| ||||||    
T  31100952 atttgcacatattaagaaatttaaagtggtaactttgacttaaaacttgtgcattttatattaaatatgttgctttttaataaataagtgttgtttttca 31101051  T
Q  110 atgaaaa 116  Q
    |||||||    
T  31101052 atgaaaa 31101058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 44007547 - 44007612
Alignment:
Q  9 aaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaa 74  Q
    ||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||| |||||    
T  44007547 aaatttgcacatgttaagaagtttaaagtagcaactttaacttggaacttgtgttttttatattaa 44007612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 6307671 - 6307561
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaa-atatgtagtttttaataaataattg 99  Q
    ||||||||||||||||||||| |||||||||||||||| ||  ||||| ||||||||||||| ||||  ||||| ||||  | |||||||||||||||||    
T  6307671 tcatgtgcaaatttgcacatgttaagaagtttaaagtaatatgtttgatttggaacttgtgtattttctattaatatat-aaatttttaataaataattg 6307573  T
Q  100 ttggttttcaat 111  Q
    ||| ||| ||||    
T  6307572 ttgttttccaat 6307561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 3096376 - 3096292
Alignment:
Q  3 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttttt 87  Q
    ||||||||||||||||||||||| || ||||||||| ||| ||| ||||  ||||| ||||||||| ||||||||||||| ||||    
T  3096376 atgtgcaaatttgcacatgataaaaaatttaaagtaataattttaacttaaaacttatgttttttatattaaatatgtagatttt 3096292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 9516750 - 9516634
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||| ||||||||||||| |||||| |||||| | |||| |||  |||  ||||||||| ||||| ||||||||| | | |||||||||||||||||    
T  9516750 tcatgtgtaaatttgcacatgttaagaaatttaaaatggtaagtttctcttataacttgtgtattttatattaaatatataactttttaataaataattg 9516651  T
Q  100 ttggttttcaatgaaaa 116  Q
     || |||||||||||||    
T  9516650 gtgtttttcaatgaaaa 9516634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 23576423 - 23576577
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||||||||||||||||| |||||| |||||| |||||||||||  ||| ||||||    ||||  ||||||||| | | |||||  ||||||||||    
T  23576423 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattgaaacttgaacattttgtattaaatatataactttttgttaaataattg 23576522  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgca 153  Q
    |||| ||||||| |||| || | |||||||||| ||||||||  ||||||||||||    
T  23576523 ttgg-tttcaataaaaacttgttacttttagttaccttaacatgtgcaatattgca 23576577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 23591867 - 23591724
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    ||||||||||||||||||||| |||||| ||| || ||  |||||||  |||||||||||   ||||  ||||||||| ||  ||||||||||||||||     
T  23591867 tcatgtgcaaatttgcacatgttaagaaattttaaataacaactttgcattggaacttgtacattttgtattaaatatataactttttaataaataatta 23591768  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||| |||||||| |||| |||  | |||||||||| ||||||||    
T  23591767 ttgattttcaataaaaacttactaattttagttgctttaacatg 23591724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 1502729 - 1502885
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||||||||||||||||| |||||| |||||| |||||||||||  |||||| |||    ||||  ||||||||| | | |||||  ||||||||||    
T  1502729 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaatttgaacattttgtattaaatatataactttttgttaaataattg 1502828  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    || ||||||||| |||| ||   |||||||||| ||||||||  ||||||||||||||    
T  1502829 tt-gttttcaataaaaatttgctacttttagttaccttaacatgtgcaatattgcaca 1502885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 12947563 - 12947649
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttttt 87  Q
    |||||||| ||||| || ||| ||||||||||||| |||||||||||||||  ||||||||  ||||| |||||||| |||||||||    
T  12947563 tcatgtgcgaatttacatatggtaagaagtttaaattagtaactttgacttaaaacttgtgcattttatattaaataggtagttttt 12947649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 21391924 - 21391994
Alignment:
Q  17 acatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttttt 87  Q
    ||||| ||||||||||||||||||||||||| ||| |||||||||| ||||| || |||||| ||||||||    
T  21391924 acatgttaagaagtttaaagtagtaactttggcttagaacttgtgtattttatataaaatatttagttttt 21391994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 155
Target Start/End: Complemental strand, 51382450 - 51382384
Alignment:
Q  91 aaataattgttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||||||||||||||||||||||||| |||  |||||||||| ||||||||  ||||||||||||||    
T  51382450 aaataattgttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcaca 51382384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 13241926 - 13241810
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||| ||||||||||||| |||||| |||||| | |||| |||| | || ||||||||| ||| | ||||||||| | | ||||||||||||||||     
T  13241926 tcatgtgaaaatttgcacatgttaagaaatttaaaatggtaagtttgtcgtgtaacttgtgtatttcatattaaatatataattttttaataaataattt 13241827  T
Q  100 ttggttttcaatgaaaa 116  Q
     || ||||||| |||||    
T  13241826 gtgtttttcaacgaaaa 13241810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25465327 - 25465267
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtg 61  Q
    ||||||||||||||||||||| ||||||||| ||| |||||| ||||  ||||||||||||    
T  25465327 tcatgtgcaaatttgcacatgttaagaagttcaaaatagtaaatttgcattggaacttgtg 25465267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 35438884 - 35438768
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||||||||||||||||| |||||| |||||| | |||| |||  |||  || |||||| ||||| ||||||||| | | ||||||||||| |||||    
T  35438884 tcatgtgcaaatttgcacatgttaagaaatttaaaatggtaagtttatcttataatttgtgtattttatattaaatatataactttttaataaacaattg 35438785  T
Q  100 ttggttttcaatgaaaa 116  Q
     || |||||||| ||||    
T  35438784 gtgtttttcaattaaaa 35438768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 5057166 - 5057077
Alignment:
Q  6 tgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgta-gtttttaataaat 94  Q
    |||||||||||| ||| | | ||||||||||| |||||||||||||| |||||||   ||||| ||||||||| ||  ||||||||||||    
T  5057166 tgcaaatttgcaaatgttcaaaagtttaaagtggtaactttgacttgaaacttgtacattttatattaaatatatatctttttaataaat 5057077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 42589340 - 42589264
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 78  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  42589340 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 42589264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 44013093 - 44013017
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 78  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  44013093 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 44013017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6180355 - 6180296
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 60  Q
    ||||||||||||||||||||| ||||||||||||| ||| || |||   |||||||||||    
T  6180355 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattggaacttgt 6180296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 5875224 - 5875258
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaa 35  Q
    ||||||||||||||||||||| |||||||||||||    
T  5875224 tcatgtgcaaatttgcacatgttaagaagtttaaa 5875258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 33673744 - 33673830
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttttt 87  Q
    |||||| ||||||| |||| | ||||||||||||| || | |||||  ||| |||||||||  ||||| |||||| |||||||||||    
T  33673744 tcatgttcaaatttacacacgctaagaagtttaaaataattactttttcttagaacttgtgcattttatattaaacatgtagttttt 33673830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 35512894 - 35512860
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaa 35  Q
    ||||||||||||||||||||| |||||||||||||    
T  35512894 tcatgtgcaaatttgcacatgttaagaagtttaaa 35512860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 52337924 - 52337834
Alignment:
Q  12 tttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattgtt 101  Q
    |||| ||||| ||||||||||||| |||||| | ||  ||| ||||| ||| ||||| ||||||||| | | |||||||||||||||||||    
T  52337924 tttgaacatgttaagaagtttaaaatagtaaatatgcattgcaacttatgtattttatattaaatatataaatttttaataaataattgtt 52337834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 132
Target Start/End: Complemental strand, 6520817 - 6520749
Alignment:
Q  64 ttttaaattaaatatgtagttttt-aataaataattgttggttttcaatgaaaaattatcacttttagtt 132  Q
    ||||||||||||||| || ||||| ||||||||||||||| ||||||| ||||| || | ||||||||||    
T  6520817 ttttaaattaaatatttaattttttaataaataattgttgtttttcaa-gaaaagttgttacttttagtt 6520749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 32543059 - 32543176
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat-gtagtttttaataaataattg 99  Q
    |||| |||||||||||||||| ||||||||| ||  |||||| ||||  || ||| |||||  | ||| |||||||||  |  |||||||||||||||||    
T  32543059 tcatatgcaaatttgcacatgttaagaagttcaagttagtaagtttgtattagaatttgtgcgtattatattaaatatactgttttttaataaataattg 32543158  T
Q  100 ttggttttcaatgaaaaa 117  Q
    |||  ||||||| |||||    
T  32543159 ttgtctttcaataaaaaa 32543176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 4249374 - 4249298
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 78  Q
    |||||||||||| ||||||| ||| |||||||||||  ||| |||   ||| ||||||||| ||||| |||||||||    
T  4249374 catgtgcaaattcgcacatgttaataagtttaaagttttaagtttatattgaaacttgtgtattttacattaaatat 4249298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 4249698 - 4249622
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 78  Q
    |||||||||||| ||||||| ||| |||||||||||  ||| |||   ||| ||||||||| ||||| |||||||||    
T  4249698 catgtgcaaattcgcacatgttaataagtttaaagttttaagtttatattgaaacttgtgtattttacattaaatat 4249622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 4250022 - 4249946
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 78  Q
    |||||||||||| ||||||| ||| |||||||||||  ||| |||   ||| ||||||||| ||||| |||||||||    
T  4250022 catgtgcaaattcgcacatgttaataagtttaaagttttaagtttatattgaaacttgtgtattttacattaaatat 4249946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 9662064 - 9661988
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 78  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| || || |||||||||    
T  9662064 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattctacattaaatat 9661988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 39627603 - 39627723
Alignment:
Q  24 aagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattgttggttttcaatgaaaaattatc 122  Q
    |||||||| ||| |||||| ||||  ||| ||||||||  ||||| ||||||||||| | |||| ||||| | ||||||| |||||||| |||| ||       
T  39627603 aagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaatatgtaacttttcaataagtgattgttgtttttcaattaaaagttgct 39627702  T
Q  123 acttttagttgccttaacatg 143  Q
    | |||||||| ||||||||||    
T  39627703 atttttagtttccttaacatg 39627723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 52788 - 52944
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||||||    
T  52788 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaacttttaatcaataattgt 52887  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||||||||||||||| |||  |||||||||| ||||||||  ||||||||||||||    
T  52888 tggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcaca 52944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 145846 - 145690
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||||||    
T  145846 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaacttttaatcaataattgt 145747  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||||||||||||||| |||  |||||||||| ||||||||  ||||||||||||||    
T  145746 tggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcaca 145690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 5e-53; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 10129272 - 10129116
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  10129272 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgtagcttttaatcaataattgt 10129173  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    ||||||||||||||||||||  | |||||||| ||||||||  ||||||||||||||    
T  10129172 tggttttcaatgaaaaattactaattttagttaccttaacatgtgcaatattgcaca 10129116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 7140468 - 7140624
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  7140468 tcatgtgcaaatttgcacatattaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgtagtttttaatcaataattgt 7140567  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    ||||||||||| |||| |||  |||||||||| ||||||||  ||||||||||||||    
T  7140568 tggttttcaataaaaagttactacttttagttaccttaacatgtgcaatattgcaca 7140624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 13327950 - 13328106
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||   |||||| |||||||||    
T  13327950 tcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaatatgtaacatttaatcaataattgt 13328049  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaac--atgcaatattgcaca 155  Q
    |||||||||||||||| |||  |||||||||| |||||||  |||||||||||||||    
T  13328050 tggttttcaatgaaaagttactacttttagttaccttaacatatgcaatattgcaca 13328106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 9744013 - 9743874
Alignment:
Q  18 catgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttcaatgaaaaa 117  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||  |||||||||||||||||||||||||||| |||||    
T  9744013 catgataagaagtttaaagtagtaactttgacttggaacttatgttttttatattaaatatgtaacttttaataaataattgttggttttcaataaaaaa 9743914  T
Q  118 ttatcacttttagttgccttaacatg--caatattgcaca 155  Q
    |||  ||||||||||| |||||||||  ||||||||||||    
T  9743913 ttactacttttagttgtcttaacatgcacaatattgcaca 9743874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 35678284 - 35678440
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||| ||||||||||| | |||||||||| ||||||    
T  35678284 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtg-tatttatattaaatatgtaaatttttaataattaattg 35678382  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    ||||||||||||||||| |||  |||||||||| | ||||||  ||||||||||||||    
T  35678383 ttggttttcaatgaaaagttactacttttagtttctttaacatgtgcaatattgcaca 35678440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 39701812 - 39701968
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||| || |||||||||||| ||||||||||||  ||||||| | |||||||    
T  39701812 tcatgtgcaaatttgcacatgttaacaagtttaaagtagtaactttgacttgaaatttgtgttttttatattaaatatgtaacttttaattagtaattgt 39701911  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||||||||| ||||| |||  |||||||||| ||||||||  ||||||||||||||    
T  39701912 tggttttcaacgaaaagttactacttttagttaccttaacatgtgcaatattgcaca 39701968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 18567425 - 18567553
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||   |||||| |||||||||    
T  18567425 tcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttggaacatgtgttttttatattaaatatgtaacatttaatcaataattgt 18567524  T
Q  101 tggttttcaatgaaaaattatcactttta 129  Q
    |||||||||||||||| ||| ||||||||    
T  18567525 tggttttcaatgaaaagttaccactttta 18567553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 39024866 - 39025002
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||| ||||| ||||||| |||||||||| ||||||    
T  39024866 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaatttgtgcattttatattaactatgtagatttttaataattaattg 39024965  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgcctt 137  Q
    |||| ||||||| |||| |||| |||||||||||||||    
T  39024966 ttgg-tttcaataaaaagttattacttttagttgcctt 39025002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 6 - 155
Target Start/End: Original strand, 40210835 - 40210986
Alignment:
Q  6 tgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggtt 105  Q
    |||||||||||||||| ||||| ||||||| ||||||||||||||| ||| |||||||||||| ||||||||||||   |||||| ||||||||||||||    
T  40210835 tgcaaatttgcacatgttaagacgtttaaattagtaactttgactttgaatttgtgttttttatattaaatatgtaacatttaatcaataattgttggtt 40210934  T
Q  106 ttcaatgaaaaattatcacttttagttgccttaac--atgcaatattgcaca 155  Q
    ||||||||||| |||  |||||||||| |||||||  |||||||||||||||    
T  40210935 ttcaatgaaaagttaatacttttagttaccttaacatatgcaatattgcaca 40210986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 143
Target Start/End: Complemental strand, 8140727 - 8140594
Alignment:
Q  10 aatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttca 109  Q
    |||||||||||| ||||||| |||||||| ||| ||||||||  || || ||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  8140727 aatttgcacatgttaagaagattaaagtaataattttgacttaaaatttatgttttttatattaaatatgtagcttttaataaataattgttggttttca 8140628  T
Q  110 atgaaaaattatcacttttagttgccttaacatg 143  Q
    ||||||||| |  |||||||||||||||||||||    
T  8140627 atgaaaaatcactacttttagttgccttaacatg 8140594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 26682237 - 26682080
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||  ||||| ||||||| ||||| |||||||||||||||||    
T  26682237 tcatgtgcaaatttgcacatgttaagaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaatgtgtagctttttaataaataattg 26682138  T
Q  100 ttggttttcaat-gaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    || |||||||||  ||||||||  |||||||||||  ||||||  ||||||||||||||    
T  26682137 tt-gttttcaataaaaaaattactacttttagttgttttaacatgtgcaatattgcaca 26682080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 14816135 - 14816291
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||| | |||| ||||||||||| | |||||||||| ||||||    
T  14816135 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttaaaacttgtg-tatttatattaaatatgtaaatttttaataattaattg 14816233  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||||||||||| |||| |||  |||||||||| | ||||||  ||||||||||||||    
T  14816234 ttggttttcaataaaaagttactacttttagtttctttaacatgtgcaatattgcaca 14816291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 14829605 - 14829449
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||| | |||| ||||||||||| | |||||||||| ||||||    
T  14829605 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttaaaacttgtg-tatttatattaaatatgtaaatttttaataattaattg 14829507  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||||||||||| |||| |||  |||||||||| | ||||||  ||||||||||||||    
T  14829506 ttggttttcaataaaaagttactacttttagtttctttaacatgtgcaatattgcaca 14829449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 19343845 - 19344002
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaa-attaaatatgtagtttttaataaataattg 99  Q
    ||||||||||||||||||||| ||| | |||||||||||||| ||||||||| ||||||| |||||||| ||||||||||||  ||||| | ||||||||    
T  19343845 tcatgtgcaaatttgcacatgttaacacgtttaaagtagtaattttgacttgaaacttgtattttttaatattaaatatgtaacttttactcaataattg 19343944  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    ||||||||||||||||| |||  |||||| ||| ||||||||  ||||||||||||||    
T  19343945 ttggttttcaatgaaaagttactacttttggttaccttaacatgtgcaatattgcaca 19344002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 38527975 - 38527833
Alignment:
Q  19 atgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataa----ataattgttggttttcaatgaa 114  Q
    |||||||||||||||||||| ||| ||||| |||||| |||||||||||| ||||||||||||| |||||||||    ||||| ||||||||||||||||    
T  38527975 atgataagaagtttaaagtaataattttgatttggaatttgtgttttttatattaaatatgtagcttttaataaataaataatcgttggttttcaatgaa 38527876  T
Q  115 aaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    || |||| |||||||||||||||||||  ||||||||||||||    
T  38527875 aagttattacttttagttgccttaacatgtgcaatattgcaca 38527833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 9801837 - 9801681
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||| ||| ||||||||| ||  ||||||| |||||||||    
T  9801837 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttgaaacttatgtttgttatattaaatatataacttttaatcaataattgt 9801738  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaacatg--caatattgcaca 155  Q
    || ||||||||||||| |||  ||||||| || | |||| |||  ||||||||||||    
T  9801737 tgattttcaatgaaaagttactacttttaattactttaatatgtacaatattgcaca 9801681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 4080403 - 4080545
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||   |||| ||||||||||| | |||||| ||| ||||||    
T  4080403 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg-catttatattaaatatgtaaatttttagtaattaattg 4080501  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    || |||||||||||||| |||  ||||||| || ||||||||||    
T  4080502 ttagttttcaatgaaaagttactacttttactttccttaacatg 4080545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 45519578 - 45519658
Alignment:
Q  8 caaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttttta 88  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||    
T  45519578 caaatttgcacatgataagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagctttta 45519658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 4084552 - 4084694
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||   |||| ||||||||||| | |||||| ||| ||||||    
T  4084552 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttatg-catttatattaaatatgtaaatttttagtaattaattg 4084650  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    || |||||||||||||| |||  ||||||| || ||||||||||    
T  4084651 ttagttttcaatgaaaagttactacttttactttccttaacatg 4084694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 4102859 - 4103001
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||   |||| ||||||||||| | |||||| ||| ||||||    
T  4102859 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttttg-catttatattaaatatgtaaatttttagtaattaattg 4102957  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    || |||||||||||||| |||  ||||||| || ||||||||||    
T  4102958 ttagttttcaatgaaaagttactacttttactttccttaacatg 4103001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 8284577 - 8284721
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag--tttttaataaataatt 98  Q
    ||||||||||||||| ||||| ||||||||||||| ||| ||||| |||||||||||||||| ||||| |||||||| || |  ||||||||||||||||    
T  8284577 tcatgtgcaaatttgtacatgttaagaagtttaaattagcaacttcgacttggaacttgtgtattttatattaaataggtggtctttttaataaataatt 8284676  T
Q  99 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    |||  |||| ||| |||| |||  |||||||||||| ||||||||    
T  8284677 gttcttttttaataaaaagttactacttttagttgctttaacatg 8284721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 1203770 - 1203655
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |   ||||||||||||||| ||||||||||||    ||||| ||||||| |    
T  1203770 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaattttgattaaaaacttgtgttttttatattaaatatgtaacagttaattaataattat 1203671  T
Q  101 tggttttcaatgaaaa 116  Q
    | ||||||||||||||    
T  1203670 ttgttttcaatgaaaa 1203655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 44091487 - 44091346
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    ||||||| ||||||||| ||| |||||| ||||||||||||||||||| || |||||||||  ||||| ||||||| ||||| |||||||||||||||||    
T  44091487 tcatgtgtaaatttgcatatgttaagaaatttaaagtagtaactttgatttagaacttgtgcattttatattaaatttgtagttttttaataaataattg 44091388  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacat 142  Q
    || ||||||||| ||||||||  |||||| ||||  |||||||    
T  44091387 tt-gttttcaataaaaaattaatacttttcgttgttttaacat 44091346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 31812282 - 31812139
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    ||||||||||||||||||||  ||||||||||||| | |||| ||||||||||||||||||  ||| | ||||||||||||| |||||||||||||| |     
T  31812282 tcatgtgcaaatttgcacatattaagaagtttaaaatggtaattttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagtt 31812183  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||  |||||||| ||||||||  |||||||| |  |||||||||    
T  31812182 ttatttttcaataaaaaattactacttttagatatcttaacatg 31812139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 26834730 - 26834600
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    ||||||||||||||||| ||  |||||| |||||| | |||| ||||||||||||||||||  ||| | ||||||||||||| |||||||||||||| |     
T  26834730 tcatgtgcaaatttgcatatattaagaaatttaaaatggtaattttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagtt 26834631  T
Q  100 ttggttttcaatgaaaaattatcacttttag 130  Q
    ||| |||||||| ||||||||  ||||||||    
T  26834630 ttgtttttcaataaaaaattactacttttag 26834600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 14961672 - 14961771
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||||||||||||||||| ||||||||||||| |||||| ||||  ||||||||||||  ||||||||||||||| | | |||||||||||| ||||    
T  14961672 tcatgtgcaaatttgcacatgctaagaagtttaaaatagtaattttgtattggaacttgtgcattttaaattaaatatttaactttttaataaatgattg 14961771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 2161556 - 2161400
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||||||||||||||||| |||||| |||||| |||||||||||  ||||||||||    |||| |||||||||| | | |||||  ||||||||||    
T  2161556 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgaattaaatatataactttttgttaaataattg 2161457  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||| ||||||| |||| ||   |||||||||| ||||||||  ||||||||||||||    
T  2161456 ttgg-tttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcaca 2161400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 12189597 - 12189740
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttttt-aataaataattg 99  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||   |||||||||||   ||| | |||||||||  | ||||| ||||||||||||    
T  12189597 tcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttatattggaacttgtacatttaatattaaatataaattttttgaataaataattg 12189696  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||| |||||||  |||| |||  ||| |||||||  ||||||||    
T  12189697 ttgtttttcaagaaaaagttaatactcttagttgttttaacatg 12189740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 12434025 - 12434168
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttttt-aataaataattg 99  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||   |||||||||||   ||| | |||||||||  | ||||| ||||||||||||    
T  12434025 tcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttatattggaacttgtacatttaatattaaatataaattttttgaataaataattg 12434124  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||| |||||||  |||| |||  ||| |||||||  ||||||||    
T  12434125 ttgtttttcaagaaaaagttaatactcttagttgttttaacatg 12434168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 7393254 - 7393370
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    |||||||| |||||||||||| ||| || |||||| |||||| |||| |||| ||||||||| ||||| ||||||||| ||  |||||||||||||||||    
T  7393254 tcatgtgcgaatttgcacatgttaaaaaatttaaaatagtaa-tttgtcttgtaacttgtgtattttatattaaatatataactttttaataaataattg 7393352  T
Q  100 ttggttttcaatgaaaaa 117  Q
     || ||||||| ||||||    
T  7393353 gtgtttttcaacgaaaaa 7393370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 31451485 - 31451420
Alignment:
Q  9 aaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaa 74  Q
    |||||||||| || |||||||||||||||||||||||| ||||| ||||||||||||||| |||||    
T  31451485 aaatttgcacgtgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaa 31451420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 3306064 - 3306220
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||||||||||||||||| |||||| |||||| |||||||||||  ||| ||||||    ||||  || |||||| | | |||||  ||||||||||    
T  3306064 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattgaaacttgaacattttgtatcaaatatataactttttgttaaataattg 3306163  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||| ||||||| |||| |||  |||||||||| ||||||||  ||||||||||||||    
T  3306164 ttgg-tttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcaca 3306220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 12132152 - 12132009
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    |||| |||||| ||||||||| |||||| ||||||||||||| ||||  ||||||||||    ||||| ||||||||| | | ||||||||||||| |||    
T  12132152 tcatctgcaaacttgcacatgttaagaaatttaaagtagtaagtttgtattggaacttgaacattttatattaaatatataactttttaataaatacttg 12132053  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    | | |||||||| |||| ||   |||||||||| | ||||||||    
T  12132052 tggtttttcaataaaaagttgctacttttagtttctttaacatg 12132009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 20514802 - 20514659
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||||| ||||||||| | |||||| |||||| | |||| |||| ||||||||||||   ||||| ||||||||| | | |||||||||||||||||    
T  20514802 tcatgtgcatatttgcacaggttaagaaatttaaaatggtaagtttgtcttggaacttgtacattttatattaaatatataactttttaataaataattg 20514703  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
     |  |||||||| | ||||||  ||||| |||||| ||| ||||    
T  20514702 gtatttttcaataagaaattactactttaagttgctttaccatg 20514659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 143
Target Start/End: Complemental strand, 34249809 - 34249703
Alignment:
Q  39 gtaactttgacttggaacttgtgttttttaaattaaatatgtag--tttttaataaataattgttggttttcaatgaaaaattatcacttttagttgcct 136  Q
    |||| |||| |||||||||||||| ||||| ||||||||| ||   ||||||||||||||||  || |||||||||||||||||  |||||||| || ||    
T  34249809 gtaagtttgtcttggaacttgtgtattttatattaaatatttaacttttttaataaataattagtgtttttcaatgaaaaattaatacttttagctgtct 34249710  T
Q  137 taacatg 143  Q
    || ||||    
T  34249709 tatcatg 34249703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 6818186 - 6818044
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat-gtagtttttaataaataattg 99  Q
    ||||||||||||||| ||||| ||||||||||||| ||||||  |||  | ||||||||||  ||||| ||||| |||   | |||||||||||||||||    
T  6818186 tcatgtgcaaatttgtacatgttaagaagtttaaaatagtaaaattgtatcggaacttgtgcattttatattaactataaaactttttaataaataattg 6818087  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacat 142  Q
    ||  ||||||||| ||| |||  | |||||||| | |||||||    
T  6818086 ttctttttcaatgtaaagttactatttttagttcctttaacat 6818044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 28014867 - 28014926
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 60  Q
    ||||||||||||||||||||| ||||||||||||| ||| || ||||  |||||||||||    
T  28014867 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgt 28014926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 43717561 - 43717704
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgta-gtttttaataaataattg 99  Q
    |||||||||||||| |||||| |||||| || |||  ||||| ||||| | ||||||||||  |||   ||||||||||||   |||||||| ||| |||    
T  43717561 tcatgtgcaaatttacacatgttaagaatttcaaaaaagtaagtttgaatgggaacttgtgcatttagtattaaatatgtatcattttaatagatacttg 43717660  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||| ||||| || |||| |  |||||||||||||| ||||||||    
T  43717661 ttgtttttccataaaaagtgttcacttttagttgctttaacatg 43717704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 26363999 - 26364057
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttg 59  Q
    |||||||||||||||| |||| |||||| |||||| |||||||||||  ||||||||||    
T  26363999 tcatgtgcaaatttgcgcatgttaagaaatttaaaatagtaactttgcattggaacttg 26364057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 29642772 - 29642706
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgtttttt 67  Q
    ||||||||||||||||| |||||||| | |||||| | |||| |||| |||| ||||||||||||||    
T  29642772 tcatgtgcaaatttgcatatgataaggaatttaaaatggtaagtttgtcttgaaacttgtgtttttt 29642706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 81
Target Start/End: Original strand, 35740948 - 35741018
Alignment:
Q  11 atttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgta 81  Q
    ||||||||||||||| || ||||| ||||||| |||||||   || |||||||||||| ||||||||||||    
T  35740948 atttgcacatgataaaaattttaatgtagtaattttgactaaaaatttgtgttttttatattaaatatgta 35741018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 36967079 - 36967125
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttg 47  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||    
T  36967079 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaactttg 36967125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 38047949 - 38048062
Alignment:
Q  3 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgta-gtttttaataaataattgtt 101  Q
    ||||||||||||||||||| |||| | |||||| | ||||||||| ||||||| |||||| |||||  ||||||||  |  ||||||||||||||||| |    
T  38047949 atgtgcaaatttgcacatgttaagtaatttaaa-tggtaactttgtcttggaatttgtgtattttatcttaaatatacatttttttaataaataattggt 38048047  T
Q  102 ggttttcaatgaaaa 116  Q
    | || | ||||||||    
T  38048048 gtttgtgaatgaaaa 38048062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 45518121 - 45518071
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgactt 51  Q
    ||||||||||||||| |||| |||||||||||||| |||||||||| ||||    
T  45518121 tcatgtgcaaatttgtacataataagaagtttaaactagtaactttaactt 45518071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 15198909 - 15198986
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 78  Q
    ||||||||||||||||||||| ||| || ||| || |||||||||||  ||| ||||||| | |||| ||||||||||    
T  15198909 tcatgtgcaaatttgcacatgttaaaaaattttaaatagtaactttgcattgtaacttgtatattttgaattaaatat 15198986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 34405085 - 34405130
Alignment:
Q  11 atttgcacatgataagaagtttaaagtagtaactttgacttggaac 56  Q
    ||||||||||| |||||||||||||||| ||||||| |||||||||    
T  34405085 atttgcacatgttaagaagtttaaagtaataactttaacttggaac 34405130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 10543639 - 10543715
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 78  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  10543639 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 10543715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 39703561 - 39703466
Alignment:
Q  62 ttttttaaattaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    ||||||| ||||||||||||  ||||||    |||||||||||||| || ||||| |||  |||||||||| ||||||||  ||||||||||||||    
T  39703561 ttttttatattaaatatgtaacttttaacccgtaattgttggtttttaacgaaaagttactacttttagttaccttaacatgtgcaatattgcaca 39703466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 142
Target Start/End: Complemental strand, 45516387 - 45516316
Alignment:
Q  70 attaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaacat 142  Q
    ||||||||||||| |||||||||||||||||| | ||||||| |||| |||  ||||||||||  ||||||||    
T  45516387 attaaatatgtagcttttaataaataattgttag-tttcaataaaaagttactacttttagttatcttaacat 45516316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 13496718 - 13496757
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagt 40  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  13496718 tcatgtgcaaatttgcacatgttaagaagtttaaaatagt 13496757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 27874690 - 27874749
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 60  Q
    ||||||||||||||||||||| ||||||||||||| ||  || ||||  |||||||||||    
T  27874690 tcatgtgcaaatttgcacatgttaagaagtttaaaatacaaattttgtattggaacttgt 27874749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 22838394 - 22838360
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaa 35  Q
    ||||||||||||||||||||| |||||||||||||    
T  22838394 tcatgtgcaaatttgcacatgttaagaagtttaaa 22838360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 38212953 - 38212987
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaa 35  Q
    ||||||||||||||||||||| |||||||||||||    
T  38212953 tcatgtgcaaatttgcacatgttaagaagtttaaa 38212987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 297258 - 297205
Alignment:
Q  7 gcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 60  Q
    ||||||||||||||| ||||||||||||| || ||||||||  ||| |||||||    
T  297258 gcaaatttgcacatgttaagaagtttaaaataataactttgtattgaaacttgt 297205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 35745982 - 35746054
Alignment:
Q  85 tttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||||| |||||||||| |||||||||||||| ||||  ||||||||| | ||||||  | ||||||||||||    
T  35745982 tttaattaataattgtttgttttcaatgaaaagttatttcttttagttactttaacaatttcaatattgcaca 35746054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 16586732 - 16586808
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 78  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| || || |||||||||    
T  16586732 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattgtacattaaatat 16586808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 40225996 - 40226028
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagttta 33  Q
    ||||||||||||||||||||| |||||||||||    
T  40225996 tcatgtgcaaatttgcacatgttaagaagttta 40226028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 5e-53; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 2795692 - 2795536
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||||||    
T  2795692 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaacttttaatcaataattgt 2795593  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||||||||||||||| |||  |||||||||| ||||||||  ||||||||||||||    
T  2795592 tggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcaca 2795536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 4047581 - 4047440
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||| || ||||||    
T  4047581 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagcttttaatcaacaattgt 4047482  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaacat 142  Q
    |||||||||||||||| |||  |||||||||| |||||||||    
T  4047481 tggttttcaatgaaaagttactacttttagttaccttaacat 4047440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 14 - 143
Target Start/End: Complemental strand, 9184363 - 9184234
Alignment:
Q  14 tgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttcaatga 113  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||    
T  9184363 tgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagtttttaatcaataattattggttttcaatga 9184264  T
Q  114 aaaattatcacttttagttgccttaacatg 143  Q
    ||| |||  |||||||||| ||||||||||    
T  9184263 aaagttactacttttagttaccttaacatg 9184234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 10 - 155
Target Start/End: Original strand, 30328345 - 30328492
Alignment:
Q  10 aatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttca 109  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||| |    
T  30328345 aatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagcttttaatcaataattgttggttttta 30328444  T
Q  110 atgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    ||||||||| |  ||||||||||  |||||||  ||||||||||||||    
T  30328445 atgaaaaatgactacttttagttatcttaacatgtgcaatattgcaca 30328492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 155
Target Start/End: Original strand, 12642004 - 12642158
Alignment:
Q  3 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttg 102  Q
    ||||||||||||||||||| ||||||||||||| || ||||||||| ||||||||||||||||||| ||||||||||||   |||||   ||||||||||    
T  12642004 atgtgcaaatttgcacatgttaagaagtttaaattaataactttgatttggaacttgtgttttttatattaaatatgtaacatttaaacgataattgttg 12642103  T
Q  103 gttttcaatgaaaaattatcacttttagttgccttaacatg--caatattgcaca 155  Q
    ||||||||||||||||||  |||||||||||||||||||||  ||||||||||||    
T  12642104 gttttcaatgaaaaattactacttttagttgccttaacatgtacaatattgcaca 12642158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 8103589 - 8103745
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||| ||||||| |||||||||| ||||||    
T  8103589 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgtagatttttaataattaattg 8103688  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||| ||||||| |||| |||  | |||||||||||||||||  ||||||||||||||    
T  8103689 ttgg-tttcaataaaaagttactatttttagttgccttaacatgtgcaatattgcaca 8103745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 5 - 143
Target Start/End: Complemental strand, 28630043 - 28629905
Alignment:
Q  5 gtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggt 104  Q
    |||||||||||||||||||||||||||||||||| || |||| |||||  |||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  28630043 gtgcaaatttgcacatgataagaagtttaaagtaatatctttaacttgagacttgtgttttttatattaaatatgtaacttttaataaataattgttggt 28629944  T
Q  105 tttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    |||||||||||| |||| | |||||||||| ||||||||    
T  28629943 tttcaatgaaaagttattatttttagttgctttaacatg 28629905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 11636900 - 11636744
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   |||| ||||||||||| | |||||||||| ||||||    
T  11636900 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtg-catttatattaaatatgtaaatttttaataattaattg 11636802  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    ||||||||||||||||| |||  |||||||||| | ||||||  ||||||||||||||    
T  11636801 ttggttttcaatgaaaagttactacttttagtttctttaacatgtgcaatattgcaca 11636744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 34578180 - 34578038
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||| ||| ||||||||| |||||||||| ||||  ||||||| ||||||| ||||||||||||| ||||||| || ||||||    
T  34578180 tcatgtgcaaatttgcacatgttaaaaagtttaaaatagtaactttaacttaaaacttgtattttttatattaaatatgtagcttttaatcaacaattgt 34578081  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    || |||||||||||||||||| |||||||||| ||||||||||    
T  34578080 tgattttcaatgaaaaattattacttttagttaccttaacatg 34578038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 41350371 - 41350252
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||  |||||||||||||||||    
T  41350371 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaattttgacttggaacttgtgctttttatattaaatatgtaacttttaataaataattgt 41350272  T
Q  101 tggttttcaatgaaaaatta 120  Q
    || |||||| || |||||||    
T  41350271 tgattttcagtgcaaaatta 41350252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 11376129 - 11375972
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaactt-gtgttttttaaattaaatatgtagtttttaataaataattg 99  Q
    ||||||| ||||||  ||||||||| |||||||||||||||||||||||||| || || |||||||||| ||||||||||||| |||||||||||||||     
T  11376129 tcatgtgtaaatttatacatgataaaaagtttaaagtagtaactttgacttgaaattttgtgttttttatattaaatatgtagcttttaataaataatta 11376030  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    ||| ||||||||||||| |||  |||||||||||| ||||||  ||||||||||||||    
T  11376029 ttgattttcaatgaaaagttactacttttagttgctttaacatgtgcaatattgcaca 11375972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 9 - 155
Target Start/End: Complemental strand, 15191034 - 15190885
Alignment:
Q  9 aaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgtt-ttttaaattaaatatgtagtttttaataaataattgttggtttt 107  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||||||  ||||||| |||||||||| |||||    
T  15191034 aaatttgcacatgttaagaagtttaaagtagtaattttgacttgaaacttgtgtttttttatattaaatatgtaacttttaatcaataattgtttgtttt 15190935  T
Q  108 caatgaaaaattatcacttttagttgccttaac--atgcaatattgcaca 155  Q
    |||||||||||||  ||||||| || |||||||  |||||||||||||||    
T  15190934 caatgaaaaattactacttttacttaccttaacatatgcaatattgcaca 15190885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 31365959 - 31366075
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||   |||||| |||||||||    
T  31365959 tcatgtgcaaatttgtacatgttaagaagtttaaattagtaactttgacttggaacttgtgttttttatattaaatatgtaacatttaatcaataattgt 31366058  T
Q  101 tggttttcaatgaaaaa 117  Q
    ||||||||||| |||||    
T  31366059 tggttttcaataaaaaa 31366075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 16174631 - 16174762
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    |||| ||||||||||||||| ||||||| ||||||||||||||||||| ||| ||||||||   |||| ||||||||||| |||||||||||| ||||||    
T  16174631 tcatttgcaaatttgcacatcataagaaatttaaagtagtaactttgaattgaaacttgtg-catttatattaaatatgtaagtttttaataattaattg 16174729  T
Q  100 ttggttttcaatgaaaaattatcacttttagtt 132  Q
    ||||||||||||||||| |||  ||||||||||    
T  16174730 ttggttttcaatgaaaagttactacttttagtt 16174762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 14466503 - 14466598
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataa 96  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||| ||||||| |||||    
T  14466503 tcatgtgcaaatttagacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaaatatgtagcttttaatcaataa 14466598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 145
Target Start/End: Original strand, 24329657 - 24329789
Alignment:
Q  14 tgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgta-gtttttaataaataattgttggttttcaatg 112  Q
    |||||||| ||| ||||||||||| ||||||||||||||||||||||   ||||| |||||||| |||  |||| ||||||||| ||||| ||||||||     
T  24329657 tgcacatgttaaaaagtttaaagtggtaactttgacttggaacttgtacattttatattaaataggtatcttttaaataaataaatgttgtttttcaatt 24329756  T
Q  113 aaaaattatcacttttagttgccttaacatgca 145  Q
    ||||||||  |||||||| |  |||||||||||    
T  24329757 aaaaattactacttttagatatcttaacatgca 24329789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 30839950 - 30839794
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||||||||||||||||| |||||| |||||| |||||||||||  ||||||||||    ||||  ||||||||| | | |||||  ||||||||||    
T  30839950 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattg 30839851  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||| ||||||| |||| ||   |||||||||| ||||||||  ||||||||||||||    
T  30839850 ttgg-tttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcaca 30839794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 36597748 - 36597592
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||||||||||||||||| |||||| |||||| |||||||||||  ||||||||||    ||||  ||||||||| | | |||||  ||||||||||    
T  36597748 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattg 36597649  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||| ||||||| |||| ||   |||||||||| ||||||||  ||||||||||||||    
T  36597648 ttgg-tttcaataaaaatttgctacttttagttaccttaacatgtgcaatattgcaca 36597592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 30893798 - 30893748
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgactt 51  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  30893798 tcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgactt 30893748  T

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Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 32019993 - 32020069
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaata 77  Q
    ||||||||||||||||||||| |||||| |||||| | |||| |||| |||||||||||||| || || ||||||||    
T  32019993 tcatgtgcaaatttgcacatgttaagaaatttaaaatggtaagtttgtcttggaacttgtgtattctatattaaata 32020069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 143
Target Start/End: Original strand, 5958196 - 5958275
Alignment:
Q  65 tttaaattaaatatgtag-tttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    |||| ||||||||||||  |||||||||| ||||||||| |||||||||||||||||  |||||||||| | ||||||||    
T  5958196 tttatattaaatatgtaaatttttaataattaattgttgattttcaatgaaaaattactacttttagtttctttaacatg 5958275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 6863725 - 6863584
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||||||||||||||||| ||| || |||||| ||||||||||   ||||||||||    ||||  ||||||||| | | |||||| ||||||||||    
T  6863725 tcatgtgcaaatttgcacatgttaaaaaatttaaaatagtaactttatattggaacttgaacattttgtattaaatatataactttttattaaataattg 6863626  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacat 142  Q
    |||| ||||||| |||| ||   |||||||||| |||||||||    
T  6863625 ttgg-tttcaataaaaacttgctacttttagttaccttaacat 6863584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 29538828 - 29538755
Alignment:
Q  69 aattaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaacat 142  Q
    |||||||||| ||| |||||||||||||||||||||||| |||||||| |||   |||||| |||| |||||||    
T  29538828 aattaaatatatagcttttaataaataattgttggtttttaatgaaaagttacttcttttaattgcattaacat 29538755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 31567500 - 31567616
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    |||| |||||||||||||||| ||| || |||||| | |||| |||| |||| || ||||   ||||| ||||||||||||| |||||||| |||||||     
T  31567500 tcatatgcaaatttgcacatgttaaaaaatttaaaatggtaattttgtcttgaaatttgttcattttatattaaatatgtagttttttaatgaataatta 31567599  T
Q  100 ttggttttcaatgaaaa 116  Q
    ||| |||||||| ||||    
T  31567600 ttgtttttcaataaaaa 31567616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3398389 - 3398330
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 60  Q
    ||||||||||||||||||||| ||||||||||||| ||| || ||||  |||||||||||    
T  3398389 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgt 3398330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 143
Target Start/End: Original strand, 10664986 - 10665116
Alignment:
Q  13 ttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattgttggttttcaat 111  Q
    ||||||||  |||||| |||||| | |||| |||| |||||||||||||| ||  | ||||||| | ||  ||||||||||||||||  |  ||||||||    
T  10664986 ttgcacatcttaagaaatttaaaatggtaagtttgtcttggaacttgtgtattgcatattaaatttataactttttaataaataattaata-ttttcaat 10665084  T
Q  112 gaaaaattatcacttttagttgccttaacatg 143  Q
    ||||| |||| |||||||||| ||||||||||    
T  10665085 gaaaagttattacttttagttaccttaacatg 10665116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 15240959 - 15241074
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttt-taataaataattg 99  Q
    ||||||||||||||| ||||| ||| ||||| ||| || ||| ||||  ||| || |||||  | ||| ||||||||| || |||| |||||||||||||    
T  15240959 tcatgtgcaaatttgtacatgttaaaaagttcaaaatattaaatttgtattgaaatttgtgcatgttatattaaatatataattttttaataaataattg 15241058  T
Q  100 ttggttttcaatgaaa 115  Q
    ||| ||||||||||||    
T  15241059 ttgtttttcaatgaaa 15241074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 12332505 - 12332429
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 78  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  12332505 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 12332429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 31613159 - 31613235
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 78  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  31613159 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 31613235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 31705097 - 31705021
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 78  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  31705097 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 31705021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 40454229 - 40454153
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 78  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  40454229 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 40454153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 35151388 - 35151313
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaat 76  Q
    ||||||||||||||||| ||| ||| ||||||||| |||||| |||   ||| ||||||||  |||||||||||||    
T  35151388 tcatgtgcaaatttgcatatgttaaaaagtttaaaatagtaaatttacattgtaacttgtgcattttaaattaaat 35151313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 2e-52; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 7349857 - 7349702
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||  |||||| ||||||||||    
T  7349857 tcatgtgtaaatttgtacatgataagaagtttaaagtagtaactttgacttaaaacttgtgttttttatattaaatatgtaacttttaacaaataattgt 7349758  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcac 154  Q
    |||||||||||||||| |||| |||||||||||||||||||  |||||||||||||    
T  7349757 tggttttcaatgaaaagttattacttttagttgccttaacatgtgcaatattgcac 7349702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 29190825 - 29190981
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| | |||||||||| |   |||||| |||||||||    
T  29190825 tcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttggaacttgtgtttttaatattaaatatgcaacatttaatcaataattgt 29190924  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaac--atgcaatattgcaca 155  Q
    ||||||||||||||||||||  |||||||||| |||||||  |||||||||||||||    
T  29190925 tggttttcaatgaaaaattactacttttagttaccttaacatatgcaatattgcaca 29190981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 41415566 - 41415703
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||| ||||||||||||| |||||||||||||||||    
T  41415566 tcatgtgcaaatttgcacatgataataagtttaaagtagtaactttgacttgaaatttgtgttttttatattaaatatgtagcttttaataaataattgt 41415665  T
Q  101 tggttttcaatgaaaaattatcacttttagttgcctta 138  Q
    || |||||||| |||| |||  ||||||||||||||||    
T  41415666 tgattttcaattaaaagttactacttttagttgcctta 41415703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 10813503 - 10813658
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaatt-aaatatgtagtttttaataaataattg 99  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||||||||  || |||||||||||||||| |||||||||  |||||| |||||||||    
T  10813503 tcatgtgcagatttgcatatgataataagtttaaagtagtaactttgacttaaaatttgtgttttttaaattaaaatatgtaacttttaacaaataattg 10813602  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaac--atgcaatattgca 153  Q
    |||||||||||| |||| |||| ||||||||||||||||||  |||||||||||||    
T  10813603 ttggttttcaataaaaagttattacttttagttgccttaacatatgcaatattgca 10813658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 23553739 - 23553582
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||| ||||  || |||| ||||||| ||||||||||||||||||||| |||||||||    
T  23553739 tcatgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttaacttaaaatttgtattttttatattaaatatgtagtttttaatcaataattgt 23553640  T
Q  101 tggttttcaat-gaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||||||||||  ||||||||  | |||||||| ||||||||  ||||||||||||||    
T  23553639 tggttttcaataaaaaaattactatttttagttaccttaacatgtgcaatattgcaca 23553582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 35999956 - 36000103
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||       ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  35999956 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt-------aacttgtgttttttatattaaatatgtagcttttaatcaataattgt 36000048  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaacatg--caatattgca 153  Q
    ||||||||||| |||| |||  |||||||||| ||||||||||  ||||||||||    
T  36000049 tggttttcaataaaaagttactacttttagttaccttaacatgtacaatattgca 36000103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 47326901 - 47327044
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||  ||| | ||||||||||||| |||||||||||||| |     
T  47326901 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttttgcatttcatattaaatatgtagttttttaataaataagtt 47327000  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||| |||||||||||||||||  |||||||| || |||||||||    
T  47327001 ttgtttttcaatgaaaaattactacttttagatgtcttaacatg 47327044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 47341697 - 47341840
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||  ||| | ||||||||||||| |||||||||||||| |     
T  47341697 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttttgcatttcatattaaatatgtagttttttaataaataagtt 47341796  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||| |||||||||||||||||  |||||||| || |||||||||    
T  47341797 ttgtttttcaatgaaaaattactacttttagatgtcttaacatg 47341840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 16667393 - 16667536
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    ||||||||||||||||||||| ||||||||||||| |  ||| ||| ||||| ||||||||| ||||| ||||||||||||| |||||||||||||| ||    
T  16667393 tcatgtgcaaatttgcacatgttaagaagtttaaaatgataattttaacttgaaacttgtgtattttatattaaatatgtagctttttaataaataagtg 16667492  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||| |||||||||||||||||  |||||||| || |||||||||    
T  16667493 ttgtttttcaatgaaaaattactacttttagatgtcttaacatg 16667536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 23051391 - 23051490
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| || |||||||||  |||||||||||||||||    
T  23051391 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgttttttatataaaatatgtaacttttaataaataattgt 23051490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 142
Target Start/End: Complemental strand, 53961488 - 53961350
Alignment:
Q  4 tgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttgg 103  Q
    |||||||||||||||||| ||||||||||||| |||||| ||||||||| || |||||||||||| ||||||||||||   |||||  |||||||||||     
T  53961488 tgtgcaaatttgcacatgttaagaagtttaaattagtaattttgacttgaaatttgtgttttttatattaaatatgtaacatttaaacaataattgttga 53961389  T
Q  104 ttttcaatgaaaaattatcacttttagttgccttaacat 142  Q
    |||||||||||||||||  |||||||||| | |||||||    
T  53961388 ttttcaatgaaaaattactacttttagttactttaacat 53961350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 4329763 - 4329635
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||| ||| ||| |||||||||||||||||||||||||| || || ||||||||| ||||||||||||  ||||||| |||||| ||    
T  4329763 tcatgtgcaaatttgcatatgttaaaaagtttaaagtagtaactttgacttgaaatttatgttttttatattaaatatgtaacttttaatcaataatcgt 4329664  T
Q  101 tggttttcaatgaaaaattatcactttta 129  Q
    ||||||||||| ||||||||  |||||||    
T  4329663 tggttttcaattaaaaattactactttta 4329635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 48910811 - 48910947
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||| ||| |||| ||||||||||||  |||||||||||| ||||||| |||||||||    
T  48910811 tcatatgcaaatttgcatatgttaagaagtttaaagtagtaactttaactaggaatttgtgttttttatgttaaatatgtagcttttaatcaataattgt 48910910  T
Q  101 tggttttcaatgaaaaattatcacttttagttgcctt 137  Q
    |  |||||||| ||||||||  |||||||||| ||||    
T  48910911 taattttcaataaaaaattactacttttagttacctt 48910947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 54495646 - 54495789
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||  ||| | ||||||||||||| |||||||||||||| |     
T  54495646 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttaacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagtt 54495745  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||| |||||||  ||||||||  |||||||| |  |||||||||    
T  54495746 ttgtttttcaaaaaaaaattactacttttagatatcttaacatg 54495789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 10389279 - 10389408
Alignment:
Q  3 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttg 102  Q
    ||||| ||||||||||||| ||| || ||| ||||||||| |||||||| |||||||||||||||| || |||||||||  ||||||| |||||||||||    
T  10389279 atgtgtaaatttgcacatgttaaaaaatttcaagtagtaattttgacttagaacttgtgttttttatatgaaatatgtaacttttaatcaataattgttg 10389378  T
Q  103 gttttcaatgaaaaattatcacttttagtt 132  Q
    ||||||||| |||| |||  ||||||||||    
T  10389379 gttttcaattaaaagttaatacttttagtt 10389408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 27362560 - 27362430
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    ||||||||||||||||||||| ||||||||||||||| |||| |||||||||||| |||||  ||| | ||||||||||||| ||||| |||||||| |     
T  27362560 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaatttgtgcatttcatattaaatatgtagctttttgataaataagtt 27362461  T
Q  100 ttggttttcaatgaaaaattatcacttttag 130  Q
    ||| |||||||| ||||||||  ||||||||    
T  27362460 ttgtttttcaataaaaaattactacttttag 27362430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 4 - 143
Target Start/End: Original strand, 8736823 - 8736962
Alignment:
Q  4 tgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattgttg 102  Q
    |||| ||||||||||||| |||||| |||||||| |||||||||||||||||| ||||  ||| | ||||||||||| | |||||||||||||| | |||    
T  8736823 tgtgtaaatttgcacatgttaagaaatttaaagtggtaactttgacttggaac-tgtgcatttcatattaaatatgtaactttttaataaataagttttg 8736921  T
Q  103 gttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
     |||||||| ||||||||  |||||||| || |||||||||    
T  8736922 tttttcaataaaaaattactacttttagatgtcttaacatg 8736962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 4 - 155
Target Start/End: Complemental strand, 2097037 - 2096883
Alignment:
Q  4 tgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattgttg 102  Q
    |||| ||||||||||||| ||||||||| ||| | |||| ||||  ||||||||||||  ||||| ||||||||| ||  ||||||||||||||||||||    
T  2097037 tgtgaaaatttgcacatgttaagaagttcaaaatggtaagtttgtattggaacttgtgcattttatattaaatatataactttttaataaataattgttg 2096938  T
Q  103 gttttcaatgaaaaattatcacttttagttgccttaac--atgcaatattgcaca 155  Q
     |||||||| |||| || |||||||||||||  |||||   ||||||||||||||    
T  2096937 tttttcaataaaaagttgtcacttttagttgatttaacttgtgcaatattgcaca 2096883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 49228823 - 49228756
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgtttttta 68  Q
    |||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||    
T  49228823 tcatgtgcaaatttgcacgtgttaagaagtttaaattagtaactttgacttggaacttgtgtttttta 49228756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 17409993 - 17409850
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttttt-aataaataattg 99  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||  |||||||||||   ||| | |||||||||  | ||||| ||||||||||||    
T  17409993 tcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttgtattggaacttgtacatttaatattaaatataaattttttgaataaataattg 17409894  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||| |||||||  |||| |||  ||| |||||||  ||||||||    
T  17409893 ttgtttttcaagaaaaagttactactattagttgttttaacatg 17409850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 34941447 - 34941308
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    |||||||| |||||||||||||||||||||||||| |||||| ||||  |||||||||||   ||||  ||| ||||| | | ||||||||||||| |||    
T  34941447 tcatgtgcgaatttgcacatgataagaagtttaaaatagtaattttgcattggaacttgtacattttgtatttaatatataactttttaataaatagttg 34941348  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaa 139  Q
    ||| |||||||| |||| || | |||||||||| ||||||    
T  34941347 ttgtttttcaataaaaagttgttacttttagttaccttaa 34941308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 51691510 - 51691399
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    ||||||| ||||||||||||| |||||| ||| || |||||||||||  ||||||||||| | |||| |||||||||| ||| ||||||||||||||||     
T  51691510 tcatgtgtaaatttgcacatgttaagaaattttaaatagtaactttgcattggaacttgtatattttgaattaaatatatagctttttaataaataatta 51691411  T
Q  100 ttggttttcaat 111  Q
    || |||||||||    
T  51691410 ttagttttcaat 51691399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 49181241 - 49181084
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    |||||||||||||||||| || ||||||||| ||| |||||| ||||  ||| ||||||||  ||||| ||||||||||| | |||| ||||||| ||||    
T  49181241 tcatgtgcaaatttgcacctgttaagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaatatgtaacttttcaataaatgattg 49181142  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    ||| |||||||| |||  ||   |||||||||| ||||||||  ||||||||||||||    
T  49181141 ttgtttttcaattaaaggttgctacttttagtttccttaacatgtgcaatattgcaca 49181084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 27 - 120
Target Start/End: Complemental strand, 39539607 - 39539513
Alignment:
Q  27 aagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattgttggttttcaatgaaaaatta 120  Q
    ||||||||| | |||||| ||||||| ||||||||  ||| | ||||||||||||| |||||||||||||| ||||| |||||||||||||||||    
T  39539607 aagtttaaaatggtaactatgacttgaaacttgtgaatttcatattaaatatgtagctttttaataaataagtgttgtttttcaatgaaaaatta 39539513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 39876999 - 39876844
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||| ||||||||||||| |||||| |||||| |||||||||||  ||||||||||    ||||  || |||||| | | |||||  ||||||||||    
T  39876999 tcatgtgtaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtatcaaatatataactttttgttaaataattg 39876900  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcac 154  Q
    |||| ||||||| |||| |||  |||||||||| ||||||||  |||||||||||||    
T  39876899 ttgg-tttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcac 39876844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 143
Target Start/End: Complemental strand, 25843459 - 25843317
Alignment:
Q  5 gtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaac--ttgtgttttttaaattaaatatgta--gtttttaataaataattgt 100  Q
    ||||||||||| | ||| ||| ||||||||||||||||||||| ||| ||||  |||||  ||||| ||||||||| ||   ||||||| ||||  ||||    
T  25843459 gtgcaaatttgtagatgttaaaaagtttaaagtagtaactttgtcttagaacttttgtgcattttatattaaatatataagctttttaacaaatggttgt 25843360  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    || |||||||| |||| |||  |||||||||||| ||||||||    
T  25843359 tgtttttcaataaaaagttactacttttagttgctttaacatg 25843317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 155
Target Start/End: Complemental strand, 49228456 - 49228369
Alignment:
Q  70 attaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaac--atgcaatattgcaca 155  Q
    ||||||||||||   |||||| || |||||||||||||||||||||| |||  |||||||||| |||||||  |||||||||||||||    
T  49228456 attaaatatgtaacatttaatcaacaattgttggttttcaatgaaaagttactacttttagttaccttaacatatgcaatattgcaca 49228369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 9759151 - 9759307
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    |||||| |||||||||||||| |||||| |||||| |||||||||||  |||||| |||    ||||  ||||||||| | | |||||  ||||||||||    
T  9759151 tcatgtacaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaagttgaacattttgtattaaatatataactttttgttaaataattg 9759250  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||| ||||||| |||| ||   |||||||||| ||||||||  ||||||||||||||    
T  9759251 ttgg-tttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcaca 9759307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 50352471 - 50352315
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    |||| |||||||||||||||| |||||| |||||| |||||| ||||  ||||||||||    ||||  ||||||||| | | |||||  ||||||||||    
T  50352471 tcatatgcaaatttgcacatgttaagaaatttaaaatagtaattttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattg 50352372  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||| ||||||| |||| ||   |||||||||| ||||||||  ||||||||||||||    
T  50352371 ttgg-tttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcaca 50352315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 134
Target Start/End: Complemental strand, 23438322 - 23438191
Alignment:
Q  3 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattgtt 101  Q
    ||||||||||||||||||| | |||| |||||| |||||||||||  ||| |||||||   ||||| | ||||||||| |  ||||||||||| ||||||    
T  23438322 atgtgcaaatttgcacatgttgagaattttaaaatagtaactttgttttgaaacttgttcattttata-taaatatgttgccttttaataaattattgtt 23438224  T
Q  102 ggttttcaatgaaaaattatcacttttagttgc 134  Q
    | |||||||| |||| |||  || |||||||||    
T  23438223 gtttttcaataaaaagttactacatttagttgc 23438191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 39216173 - 39216057
Alignment:
Q  18 catgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttt-ttaataaataattgttggttttcaatgaaaa 116  Q
    |||| ||||||||||||| || ||  |||| || | ||||||||  ||||| |||||||||||||||| | |||||||| |||||| |||| ||| ||||    
T  39216173 catgttaagaagtttaaaataatagttttgtctcgaaacttgtgcattttatattaaatatgtagtttgtcaataaatagttgttgttttttaataaaaa 39216074  T
Q  117 attatcacttttagttg 133  Q
     ||| ||||||||||||    
T  39216073 cttaccacttttagttg 39216057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 18882276 - 18882335
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 60  Q
    ||||||||||||||||||||| ||||||||||||| ||| || ||||  |||||||||||    
T  18882276 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgt 18882335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 24685006 - 24684947
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 60  Q
    ||||||||||||||||||||| ||||||||||||| ||| || ||||  |||||||||||    
T  24685006 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgcattggaacttgt 24684947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 52391467 - 52391357
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat-gtagtttttaataaataattg 99  Q
    ||||||| ||||||||||||| ||||||||||||| ||| || ||||  |||||||||||   ||| | |||||||||   | |||| ||||||||||||    
T  52391467 tcatgtgtaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttgaataaataattg 52391368  T
Q  100 ttggttttcaa 110  Q
    ||| |||||||    
T  52391367 ttgtttttcaa 52391357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 19450911 - 19450968
Alignment:
Q  3 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 60  Q
    ||||||||||||||||||| ||||||||||||| ||| || ||||  |||||||||||    
T  19450911 atgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgt 19450968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 36971439 - 36971326
Alignment:
Q  5 gtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattgttgg 103  Q
    |||||||||| | |||| |||||| |||||| ||||||||||  |||| |||||||   ||||| |||||||||||||  ||| |||||||  ||||||     
T  36971439 gtgcaaatttacgcatgttaagaaatttaaaatagtaactttatcttgaaacttgttcattttatattaaatatgtagcctttaaataaatttttgttgt 36971340  T
Q  104 ttttcaatgaaaaa 117  Q
    |||||||| |||||    
T  36971339 ttttcaataaaaaa 36971326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 32459498 - 32459422
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 78  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  32459498 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 32459422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 155
Target Start/End: Complemental strand, 40049725 - 40049571
Alignment:
Q  3 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattgtt 101  Q
    ||||||||||||||||||| |||||| |||||| |||||| ||||  |||||||||     ||||  ||||||||| | | |||||  ||||||||||||    
T  40049725 atgtgcaaatttgcacatgttaagaaatttaaaatagtaattttgcattggaactttaacattttttattaaatatataattttttgttaaataattgtt 40049626  T
Q  102 ggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    || |||| || |||| |||  |||||||||| | ||||||  ||||||||||||||    
T  40049625 gg-tttctataaaaacttactacttttagttactttaacatgtgcaatattgcaca 40049571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 49250345 - 49250421
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 78  Q
    |||||||||||||||| ||| |||||| |||||||||| || |||   ||| ||||||||| ||||| |||||||||    
T  49250345 catgtgcaaatttgcatatgttaagaaatttaaagtagcaagtttatattgaaacttgtgtattttacattaaatat 49250421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 51070407 - 51070520
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    ||||||| |||||||||| |  |||||| |||||| | |||| ||||  ||| ||||||||| ||||| ||||||||| ||  |||||||||||| ||||    
T  51070407 tcatgtgaaaatttgcacgt--taagaaatttaaaatggtaagtttgttttgtaacttgtgtattttatattaaatatataactttttaataaatgattg 51070504  T
Q  100 ttggttttcaatgaaa 115  Q
     || ||||||||||||    
T  51070505 gtgtttttcaatgaaa 51070520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 46803624 - 46803574
Alignment:
Q  83 tttttaataaataattgttggttttcaatgaaaaattatcacttttagttg 133  Q
    |||||||||||||||| ||| |||||||| ||||| | |||||||||||||    
T  46803624 tttttaataaataatttttgtttttcaataaaaaaatttcacttttagttg 46803574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 142
Target Start/End: Original strand, 13009813 - 13009906
Alignment:
Q  50 ttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaacat 142  Q
    ||||||||||| | ||||  ||||||||| ||| |||||| ||||||||| || ||||||||| |||| |||  |||||||||||  |||||||    
T  13009813 ttggaacttgtatattttgtattaaatatatagctttttagtaaataattattagttttcaataaaaacttaatacttttagttgttttaacat 13009906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 120
Target Start/End: Original strand, 16069299 - 16069336
Alignment:
Q  83 tttttaataaataattgttggttttcaatgaaaaatta 120  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  16069299 tttttaataaataattgttgtttttcaataaaaaatta 16069336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 19468361 - 19468304
Alignment:
Q  3 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 60  Q
    ||||||||||||||||||| ||||||||||||| ||| || ||||  ||| |||||||    
T  19468361 atgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattgaaacttgt 19468304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 120
Target Start/End: Complemental strand, 27298977 - 27298940
Alignment:
Q  83 tttttaataaataattgttggttttcaatgaaaaatta 120  Q
    ||||||||||||||||| || |||||||||||||||||    
T  27298977 tttttaataaataattggtgtttttcaatgaaaaatta 27298940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 42479901 - 42479978
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 78  Q
    ||||||||||||||||||||| |||||| |||||  |  ||| |||| |||||||||||||  ||||| || ||||||    
T  42479901 tcatgtgcaaatttgcacatgttaagaaatttaatatgataaatttgtcttggaacttgtgcattttatatcaaatat 42479978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 4779445 - 4779477
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagttta 33  Q
    ||||||||||||||||||||| |||||||||||    
T  4779445 tcatgtgcaaatttgcacatgttaagaagttta 4779477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 41887579 - 41887655
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 78  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||| ||||||||| ||||| |||||||||    
T  41887579 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattgaaacttgtgtattttacattaaatat 41887655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 49332419 - 49332359
Alignment:
Q  83 tttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||||||||||||||||  |  ||||||||||||| |||| ||||||| || ||||||||||    
T  49332419 tttttaataaataattaatatttttcaatgaaaagttattacttttaattaccttaacatg 49332359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 102
Target Start/End: Original strand, 55517469 - 55517501
Alignment:
Q  70 attaaatatgtagtttttaataaataattgttg 102  Q
    |||||||||||| ||||||||||||||||||||    
T  55517469 attaaatatgtattttttaataaataattgttg 55517501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 13254 - 13098
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||| | |||||| |||||||||||| ||||||||||||| ||||||| || ||||||    
T  13254 tcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttaatttggaatttgtgttttttatattaaatatgtagcttttaatcaacaattgt 13155  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaac--atgcaatattgcaca 155  Q
    ||||||||||||||||||||  |||||||||| |||||||  |||||||||||||||    
T  13154 tggttttcaatgaaaaattactacttttagttaccttaacatatgcaatattgcaca 13098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 5e-44; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 31069591 - 31069733
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    |||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||   |||||| |||||||||    
T  31069591 tcatgtgcaaatttacacatgttaagaagtttaaattagtaactttgacttggaacttgtgttttttatattaaatatgtaacatttaatcaataattgt 31069690  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||||||||||| |||| |||  |||||||||| ||||||||||    
T  31069691 tggttttcaataaaaacttactacttttagttaccttaacatg 31069733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 24 - 155
Target Start/End: Original strand, 5362925 - 5363058
Alignment:
Q  24 aagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatca 123  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||| || |||||||||||||||||||||| |||  |    
T  5362925 aagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagcttttaatcaacaattgttggttttcaatgaaaagttacta 5363024  T
Q  124 cttttagttgccttaaca--tgcaatattgcaca 155  Q
    ||||||||| ||||||||  ||||||||||||||    
T  5363025 cttttagttaccttaacatgtgcaatattgcaca 5363058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 2830690 - 2830832
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    |||||| |||||||||||||| ||||||||||||| || ||||||| | || ||| |||||||||||| ||||||||||||| ||||||| |||||||||    
T  2830690 tcatgtacaaatttgcacatgttaagaagtttaaaataataactttaatttagaatttgtgttttttatattaaatatgtagcttttaatcaataattgt 2830789  T
Q  101 tggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    |||||||||||||||| |||  |||||||||| ||||||||||    
T  2830790 tggttttcaatgaaaagttactacttttagttaccttaacatg 2830832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 31169772 - 31169915
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgta-gtttttaataaataattg 99  Q
    ||||||| ||||||||||||| ||| || ||||||||||||||||||||||||||||||||  ||||| |||||||||||| ||||||||||| |||||     
T  31169772 tcatgtgtaaatttgcacatgttaacaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaatatgtaggtttttaataattaatta 31169871  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||||||||||| |||||||||  | ||||||| |||||||||||    
T  31169872 ttggttttcaaagaaaaattactatttttagtagccttaacatg 31169915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 23 - 143
Target Start/End: Original strand, 22974604 - 22974724
Alignment:
Q  23 taagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatc 122  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||  ||||||| ||||||||||| ||||||||||||| |||      
T  22974604 taagaagtttaaaatagtaactttaacttggaacttgtgttttttatattaaatatgtaacttttaatcaataattgttgattttcaatgaaaagttact 22974703  T
Q  123 acttttagttgccttaacatg 143  Q
    |||||||||| ||||||||||    
T  22974704 acttttagttaccttaacatg 22974724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 23 - 143
Target Start/End: Complemental strand, 23813797 - 23813677
Alignment:
Q  23 taagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatc 122  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||  ||||||| ||||||||||| ||||||||||||| |||      
T  23813797 taagaagtttaaaatagtaactttaacttggaacttgtgttttttatattaaatatgtaacttttaatcaataattgttgattttcaatgaaaagttact 23813698  T
Q  123 acttttagttgccttaacatg 143  Q
    |||||||||| ||||||||||    
T  23813697 acttttagttaccttaacatg 23813677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 10887198 - 10887055
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    ||||||||||||||||||||| ||||||||||||||| |||| ||||| ||||||||||||| ||||| ||||||||||||| |||||||||||||| |     
T  10887198 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgatttggaacttgtgtattttatattaaatatgtagctttttaataaataagtt 10887099  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||| |||||||| ||||||||  |||||||| |  |||||||||    
T  10887098 ttgtttttcaataaaaaattactacttttagatatcttaacatg 10887055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 132
Target Start/End: Original strand, 1017788 - 1017919
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattgt 100  Q
    |||||| |||||| |||||| |||||||||||||||||||||||||||||| || |||||  ||||| ||||||||||| | ||||||||||||||||||    
T  1017788 catgtgtaaatttacacatgttaagaagtttaaagtagtaactttgacttgaaagttgtgcattttatattaaatatgtaaatttttaataaataattgt 1017887  T
Q  101 tggttttcaatgaaaaattatcacttttagtt 132  Q
    |||||||||| ||||| |||  ||||||||||    
T  1017888 tggttttcaacgaaaagttactacttttagtt 1017919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 17596510 - 17596404
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||  ||||| ||||| ||||||| |||||||||| ||||||    
T  17596510 tcatgtgcaaatttgtacatgataagaagtttaaagtagtaactttgatttggaacttgtgcattttatattaactatgtagatttttaataattaattg 17596411  T
Q  100 ttggttt 106  Q
    |||||||    
T  17596410 ttggttt 17596404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 31568278 - 31568163
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||| | ||||||||||| |||| |||||| |||||    
T  31568278 tcatgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttgatttgaaacttgtgttttttataataaatatgtagcttttgaataaa-aattg 31568180  T
Q  100 ttggttttcaatgaaaa 116  Q
    ||| |||||||| ||||    
T  31568179 ttgattttcaataaaaa 31568163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 6017025 - 6016882
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||  ||| | ||||||||| | | ||||||| |||||| ||    
T  6017025 tcatgtgcaaatttgcacatgttaaaaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatatataactttttaaaaaataagtg 6016926  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||| ||||||||||||| |||  |||||||| || |||| ||||    
T  6016925 ttgtttttcaatgaaaagttactacttttagatgtcttaccatg 6016882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 18332697 - 18332840
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    |||||||||||||| |||||| |||||||||||||||  ||| ||||||||||||||| ||  ||| | ||||||||| ||| |||||||||||||| |     
T  18332697 tcatgtgcaaattttcacatgttaagaagtttaaagtgataattttgacttggaacttatgcatttcatattaaatatatagctttttaataaataagtt 18332796  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||| |||||||| ||||||||  |||||||| |  |||||||||    
T  18332797 ttgtttttcaataaaaaattactacttttagatatcttaacatg 18332840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 3853112 - 3853052
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtg 61  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||    
T  3853112 tcatgtgcaaatttgcacatgttaagaaatttaaagtagtaactttgacttggaagttgtg 3853052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 8977475 - 8977632
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||| |||||||||| || ||||||||| ||| |||||| ||||  ||| ||||||||  ||||| ||||||||||| | |||| ||||||| ||||    
T  8977475 tcatgtgtaaatttgcacttgttaagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaatatgtaacttttcaataaatgattg 8977574  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    ||| |||||||| |||  ||   |||||||||| ||||||||  ||||||||||||||    
T  8977575 ttgtttttcaattaaaggttgctacttttagtttccttaacatgtgcaatattgcaca 8977632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 31503909 - 31503834
Alignment:
Q  3 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 78  Q
    ||||||||||||||||||| |||||| ||||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  31503909 atgtgcaaatttgcacatgttaagaaatttaaagtagtaagtttatattggaacttgtgtattttatattaaatat 31503834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 14228135 - 14228291
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||||||||||||||||| |||||| |||||| |||||||||||  ||||||||||    ||||  ||||||||| | | |||||  ||||||||||    
T  14228135 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattg 14228234  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||| ||||||| |||| ||   ||||||| || ||||||||  ||||||||||||||    
T  14228235 ttgg-tttcaataaaaacttgctacttttaattaccttaacatgtgcaatattgcaca 14228291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 28943778 - 28943934
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||||||||||||||||| |||||| |||||| |||||||||||  ||||||||||    ||||  ||||||||| | | |||||  ||||||||||    
T  28943778 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattg 28943877  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||| ||||||| |||| ||   ||||||| || ||||||||  ||||||||||||||    
T  28943878 ttgg-tttcaataaaaacttgctacttttaattaccttaacatgtgcaatattgcaca 28943934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 81 - 155
Target Start/End: Original strand, 26602520 - 26602596
Alignment:
Q  81 agtttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||||||||||| |||||||||||||||| ||||||||||  |||||||||| |||||| |  ||||||||||||||    
T  26602520 agtttttaataattaattgttggttttcagtgaaaaattactacttttagtttccttaatatgtgcaatattgcaca 26602596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 17141444 - 17141328
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    ||||||||||||||||| ||| ||||| ||||||  |||||| |||| ||| |||||||    ||||| ||||||||||||| |||||||||||| ||||    
T  17141444 tcatgtgcaaatttgcatatgttaagatgtttaagatagtaattttgtcttagaacttgctcattttatattaaatatgtagctttttaataaattattg 17141345  T
Q  100 ttggttttcaatgaaaa 116  Q
    ||| |||| ||| ||||    
T  17141344 ttgttttttaataaaaa 17141328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 29863311 - 29863468
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat-gtagtttttaataaataattg 99  Q
    ||||||||||||||||||||| ||||||||||||| ||||||  |||  | ||||||| ||  ||||| ||||| |||   | ||||||||||||||||     
T  29863311 tcatgtgcaaatttgcacatgttaagaagtttaaaatagtaaaattgtgtcggaacttttgcattttatattaactataaaactttttaataaataatta 29863410  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    ||  ||||||||| ||| |||  | |||||||| | ||||||  ||||||||||||||    
T  29863411 ttctttttcaatgtaaagttactatttttagttcctttaacatgtgcaatattgcaca 29863468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 143
Target Start/End: Complemental strand, 3850651 - 3850578
Alignment:
Q  70 attaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||||||||||||  ||||||| ||||||| ||| ||||||||||||| ||   |||||||||||||||||||||    
T  3850651 attaaatatgtaacttttaatgaataattattgattttcaatgaaaagttgctacttttagttgccttaacatg 3850578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 34692523 - 34692464
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 60  Q
    ||||||||||||||||||||| ||||||||||||| ||| || ||||  |||||||||||    
T  34692523 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgt 34692464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 17552596 - 17552752
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||||||||||||||||| |||||| |||||| |||||| | ||  ||||||||||    ||||  ||||||||| | | |||||  ||||||||||    
T  17552596 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaattatgcattggaacttgaacattttgtattaaatatataattttttgttaaataattg 17552695  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||| |||| || |||| ||   |||||||||| ||||||||  ||||||||||||||    
T  17552696 ttgg-tttcgataaaaacttgctacttttagttaccttaacatgtgcaatattgcaca 17552752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 23936385 - 23936483
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 98  Q
    ||||||||||||||||||||| ||| ||||||||  ||||||||||   |||||||||||   ||||| ||||||||  | | ||||||||||||||||    
T  23936385 tcatgtgcaaatttgcacatgttaacaagtttaacatagtaactttcttttggaacttgtacattttatattaaatacataactttttaataaataatt 23936483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 26602478 - 26602511
Alignment:
Q  18 catgataagaagtttaaagtagtaactttgactt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  26602478 catgataagaagtttaaagtagtaactttgactt 26602511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 155
Target Start/End: Complemental strand, 33017891 - 33017737
Alignment:
Q  3 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattgtt 101  Q
    ||||||||||||||||||| ||| || |||||| |||||||||||  | ||||||||    ||||  ||||||||| | | |||||  ||||||||||||    
T  33017891 atgtgcaaatttgcacatgttaaaaaatttaaaatagtaactttgcataggaacttgaacattttgtattaaatatataactttttgttaaataattgtt 33017792  T
Q  102 ggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||||| ||| |||| ||   | |||||||| ||||||||  ||||||||||||||    
T  33017791 ggtttt-aataaaaacttgctaattttagttaccttaacatgtgcaatattgcaca 33017737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 34733711 - 34733787
Alignment:
Q  2 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 78  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  34733711 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 34733787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 30591172 - 30591315
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    |||||||||||||| |||||| |||||||||| || | |||| ||||  ||| ||||||| | ||||  ||||||| | | | ||||| |||||||||||    
T  30591172 tcatgtgcaaatttacacatgttaagaagttttaaatggtaattttgcattgtaacttgtatattttgtattaaatgtataactttttgataaataattg 30591271  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    |   |||||||| |||| |||  || ||||||||| ||||||||    
T  30591272 tattttttcaataaaaacttactacatttagttgcgttaacatg 30591315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 34300493 - 34300422
Alignment:
Q  39 gtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattgttggttttca 109  Q
    |||||||||| ||| ||  ||||||||||| ||||||||||||| |||| ||||||||||| ||| ||||||    
T  34300493 gtaactttgatttgaaatatgtgttttttatattaaatatgtagcttttaaataaataattattgattttca 34300422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 20979141 - 20979107
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaa 35  Q
    ||||||||||||||||||||| |||||||||||||    
T  20979141 tcatgtgcaaatttgcacatgttaagaagtttaaa 20979107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 32614953 - 32614990
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagta 38  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  32614953 tcatgtacaaatttgcacatgttaagaagtttaaagta 32614990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 68
Target Start/End: Original strand, 32615281 - 32615314
Alignment:
Q  35 agtagtaactttgacttggaacttgtgtttttta 68  Q
    |||||||||||||| |||||||||||||||||||    
T  32615281 agtagtaactttgatttggaacttgtgtttttta 32615314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 32615540 - 32615584
Alignment:
Q  72 taaatatgtagtttttaataaataattgttggttttcaatgaaaa 116  Q
    ||||||||||| ||||||| |||||||| || |||||||||||||    
T  32615540 taaatatgtagcttttaatcaataattgatgattttcaatgaaaa 32615584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 5860 - 5703
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||| ||||  || |||| ||||||| ||||||||||||||||||||| |||||||||    
T  5860 tcatgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttaacttaaaatttgtattttttatattaaatatgtagtttttaatcaataattgt 5761  T
Q  101 tggttttcaat-gaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 155  Q
    |||||||||||  ||||||||  | |||||||| ||||||||  ||||||||||||||    
T  5760 tggttttcaataaaaaaattactatttttagttaccttaacatgtgcaatattgcaca 5703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 3422 - 3565
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||| ||||||||||||  |||||||||||||||||| ||||| | ||||||||| ||||||||| ||||||||||||  ||||||| |||||||||    
T  3422 tcatgtgtaaatttgcacatattaagaagtttaaagtagttactttaaattggaacttatgttttttatattaaatatgtaacttttaatcaataattgt 3521  T
Q  101 tggttttcaatgaaaaa-ttatcacttttagttgccttaacatg 143  Q
    ||||||| ||||||||| |||  |||||||||| | ||||||||    
T  3522 tggtttttaatgaaaaagttactacttttagttacattaacatg 3565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 37123 - 37266
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    ||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||  ||| | ||||||||||||| |||||||||||||| |     
T  37123 tcatgtgcaaatttgcacatgttaagaagtttaaagtgataactttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagtt 37222  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    ||| |||||||| ||||||||  |||||||| |  |||||||||    
T  37223 ttgtttttcaataaaaaattactacttttagatatcttaacatg 37266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 182211 - 182093
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgt 100  Q
    ||||||| ||||||| ||||| ||||||||||||||||||| | |||| ||| ||||||||||||||| ||||||||||||  |||||||||||||||||    
T  182211 tcatgtgtaaatttgtacatgttaagaagtttaaagtagta-cgttgatttgaaacttgtgttttttatattaaatatgtaacttttaataaataattgt 182113  T
Q  101 tggttttcaatgaaaaatta 120  Q
    | ||||||||| ||||||||    
T  182112 ttgttttcaataaaaaatta 182093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 8423 - 8564
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattg 99  Q
    ||||||| ||||||||| ||| |||||| ||||||||||||||||||| || |||||||||  ||||| ||||||| ||||| |||||||||||||||||    
T  8423 tcatgtgtaaatttgcatatgttaagaaatttaaagtagtaactttgatttagaacttgtgcattttatattaaatttgtagttttttaataaataattg 8522  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacat 142  Q
    || ||||||||| ||||||||  |||||| ||||  |||||||    
T  8523 tt-gttttcaataaaaaattaatacttttcgttgttttaacat 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 57; Significance: 9e-24; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 191326 - 191461
Alignment:
Q  3 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttg 102  Q
    ||||||||||||||||||| |||||| |||||| |   || |||| ||||||| |||||| ||||| ||||||||| || ||||||||||||||| |       
T  191326 atgtgcaaatttgcacatgttaagaaatttaaaatgacaaatttgtcttggaa-ttgtgtattttatattaaatatataatttttaataaataatcggat 191424  T
Q  103 gttttcaatgaaaaattatcacttttagttgccttaa 139  Q
    |||||||||||||||||| |||||||||||| |||||    
T  191425 gttttcaatgaaaaattaccacttttagttggcttaa 191461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 43633 - 43479
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagttt--aaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataatt 98  Q
    ||||||||||||||| | ||| ||||||||||  |||| | ||||||| ||||  ||||| | ||||||| ||||||||| ||  ||||||| |||||||    
T  43633 tcatgtgcaaatttgaatatgttaagaagtttttaaagcaataactttaacttaaaacttatattttttatattaaatatataacttttaattaataatt 43534  T
Q  99 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgc 152  Q
    |||| |||||||||||||||||  ||||||| || ||||||||  |||||||||||    
T  43533 gttgattttcaatgaaaaattactactttta-ttaccttaacacgtgcaatattgc 43479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 16544 - 16654
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaa-atatgtagtttttaataaataattg 99  Q
    ||||||||||||||||||||| |||||||||||||||| ||  ||||| ||||||||||||| ||||  ||||| ||||  | |||||||||||||||||    
T  16544 tcatgtgcaaatttgcacatgttaagaagtttaaagtaatatgtttgatttggaacttgtgtattttctattaatatat-aaatttttaataaataattg 16642  T
Q  100 ttggttttcaat 111  Q
    ||| ||| ||||    
T  16643 ttgttttccaat 16654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 94027 - 94170
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttt-taataaataattg 99  Q
    ||||||||||||||||| ||| |||||||||| || || |||||||   ||||||||| |   ||||  ||||||||| ||||||| ||||||||||||     
T  94027 tcatgtgcaaatttgcatatgttaagaagttttaaatactaactttacattggaacttatacattttgtattaaatatatagttttttaataaataatta 94126  T
Q  100 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 143  Q
    || ||||||||| |||| |||  |||||||||||  ||||||||    
T  94127 ttagttttcaataaaaacttactacttttagttgatttaacatg 94170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 13574 - 13633
Alignment:
Q  3 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgt 62  Q
    ||||||||||||||||||| ||||||||||||| |||||| ||||  ||| |||||||||    
T  13574 atgtgcaaatttgcacatgttaagaagtttaaattagtaagtttgcattgaaacttgtgt 13633  T

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Target: scaffold0149 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 22631 - 22516
Alignment:
Q  3 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattgtt 101  Q
    |||| |||||||||||||| |||||| |||||| |  ||| |||| ||| |||||| ||| || ||  |||||||| ||| ||||||||||||||||| |    
T  22631 atgtacaaatttgcacatgttaagaaatttaaaatgttaattttgtcttagaacttttgtattctatgttaaatatatagctttttaataaataattgat 22532  T
Q  102 ggttttcaatgaaaaa 117  Q
    | |||||||| |||||    
T  22531 gtttttcaataaaaaa 22516  T

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Target: scaffold0503 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 9096 - 9213
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattg 99  Q
    ||||||| |||||| | |||||||||||||| ||| |||||| |||   ||||||| ||||| ||||| ||||||| | | |||||||||||| | ||||    
T  9096 tcatgtgaaaatttacccatgataagaagttcaaaatagtaagtttattttggaacatgtgtattttacattaaatgtataagtttttaataattgattg 9195  T
Q  100 ttggttttcaatgaaaaa 117  Q
    ||| || ||||| |||||    
T  9196 ttgtttatcaataaaaaa 9213  T

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Target: scaffold0136 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 1452 - 1486
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaagtttaaa 35  Q
    ||||||||||||||||||||| |||||||||||||    
T  1452 tcatgtgcaaatttgcacatgttaagaagtttaaa 1486  T

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