View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18384_low_20 (Length: 346)

Name: NF18384_low_20
Description: NF18384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18384_low_20
NF18384_low_20
[»] chr1 (44 HSPs)
chr1 (104-183)||(44344150-44344229)
chr1 (83-183)||(17504151-17504248)
chr1 (83-179)||(1501627-1501720)
chr1 (83-183)||(9877512-9877609)
chr1 (104-180)||(4695048-4695124)
chr1 (104-183)||(45315382-45315461)
chr1 (83-183)||(5586596-5586693)
chr1 (83-183)||(8828687-8828784)
chr1 (83-183)||(10296700-10296797)
chr1 (83-179)||(12650030-12650123)
chr1 (84-183)||(45286341-45286437)
chr1 (107-183)||(48524620-48524696)
chr1 (104-183)||(6488998-6489077)
chr1 (83-183)||(3459743-3459840)
chr1 (83-183)||(5618179-5618276)
chr1 (83-183)||(8853203-8853300)
chr1 (83-183)||(35521329-35521425)
chr1 (83-183)||(40934527-40934624)
chr1 (83-179)||(46283515-46283608)
chr1 (107-180)||(50208471-50208544)
chr1 (83-177)||(26095604-26095695)
chr1 (107-183)||(43726334-43726410)
chr1 (83-181)||(49021777-49021872)
chr1 (104-183)||(34480310-34480389)
chr1 (104-183)||(50312114-50312193)
chr1 (83-183)||(8641053-8641150)
chr1 (83-179)||(33471524-33471617)
chr1 (105-179)||(40770253-40770327)
chr1 (107-179)||(39672965-39673037)
chr1 (108-183)||(16515743-16515818)
chr1 (104-183)||(26874353-26874432)
chr1 (104-179)||(27547055-27547130)
chr1 (83-183)||(32694417-32694514)
chr1 (83-183)||(45569113-45569210)
chr1 (104-179)||(730925-731000)
chr1 (104-183)||(24234663-24234742)
chr1 (104-179)||(28554316-28554391)
chr1 (104-179)||(48970813-48970888)
chr1 (83-183)||(25012757-25012854)
chr1 (125-179)||(30146206-30146260)
chr1 (107-176)||(16087089-16087158)
chr1 (83-176)||(27065253-27065343)
chr1 (104-183)||(35214023-35214102)
chr1 (129-183)||(45749327-45749381)
[»] scaffold0119 (1 HSPs)
scaffold0119 (83-183)||(41387-41484)
[»] chr8 (33 HSPs)
chr8 (83-183)||(33279045-33279142)
chr8 (83-183)||(42684896-42684993)
chr8 (83-183)||(39198725-39198822)
chr8 (104-183)||(17494849-17494928)
chr8 (104-183)||(21660853-21660932)
chr8 (104-183)||(29596511-29596590)
chr8 (104-183)||(29726653-29726732)
chr8 (104-183)||(1235693-1235772)
chr8 (104-183)||(4968136-4968215)
chr8 (104-183)||(9887244-9887323)
chr8 (104-183)||(27712873-27712952)
chr8 (83-183)||(8156817-8156914)
chr8 (83-183)||(33527048-33527145)
chr8 (83-179)||(36556648-36556741)
chr8 (106-183)||(40277350-40277427)
chr8 (104-183)||(10925228-10925307)
chr8 (104-183)||(28828342-28828421)
chr8 (104-183)||(30253752-30253831)
chr8 (104-183)||(30464023-30464102)
chr8 (104-175)||(41617157-41617228)
chr8 (83-183)||(34198943-34199040)
chr8 (83-183)||(34632334-34632431)
chr8 (104-180)||(18929812-18929888)
chr8 (104-183)||(18805855-18805933)
chr8 (83-183)||(26938294-26938391)
chr8 (83-183)||(43497315-43497412)
chr8 (104-183)||(37727308-37727387)
chr8 (104-183)||(26187237-26187316)
chr8 (83-167)||(148401-148482)
chr8 (83-176)||(12649588-12649678)
chr8 (108-183)||(2241580-2241656)
chr8 (88-176)||(17958913-17958999)
chr8 (104-169)||(38229733-38229798)
[»] chr7 (43 HSPs)
chr7 (83-183)||(8949400-8949497)
chr7 (83-183)||(43575171-43575268)
chr7 (83-183)||(46738373-46738470)
chr7 (104-183)||(7149417-7149496)
chr7 (83-179)||(8805852-8805945)
chr7 (83-183)||(11338001-11338098)
chr7 (83-179)||(31115911-31116004)
chr7 (83-179)||(45055430-45055523)
chr7 (104-183)||(19104382-19104461)
chr7 (104-183)||(34287625-34287704)
chr7 (83-180)||(42391404-42391498)
chr7 (83-183)||(7173040-7173137)
chr7 (83-183)||(12423954-12424051)
chr7 (83-183)||(20121314-20121411)
chr7 (83-183)||(31813839-31813936)
chr7 (83-183)||(41857249-41857346)
chr7 (83-183)||(44457892-44457989)
chr7 (83-183)||(45867554-45867651)
chr7 (84-179)||(41922391-41922483)
chr7 (104-183)||(16860996-16861075)
chr7 (104-183)||(31283280-31283359)
chr7 (83-183)||(17173197-17173294)
chr7 (83-183)||(24331487-24331584)
chr7 (83-183)||(38495023-38495120)
chr7 (83-183)||(45062171-45062268)
chr7 (83-183)||(47221816-47221913)
chr7 (104-183)||(21627042-21627121)
chr7 (83-179)||(2699730-2699823)
chr7 (109-183)||(8522433-8522507)
chr7 (83-179)||(21733176-21733269)
chr7 (104-180)||(41749692-41749768)
chr7 (104-183)||(11682031-11682110)
chr7 (104-183)||(21455680-21455759)
chr7 (104-179)||(49023691-49023766)
chr7 (104-183)||(23036756-23036835)
chr7 (104-183)||(32165347-32165426)
chr7 (104-183)||(43268038-43268117)
chr7 (104-183)||(46426770-46426849)
chr7 (107-183)||(19124940-19125016)
chr7 (104-183)||(49114386-49114459)
chr7 (104-176)||(48765974-48766046)
chr7 (104-183)||(32064516-32064594)
chr7 (126-183)||(10543559-10543616)
[»] chr5 (43 HSPs)
chr5 (83-183)||(14871842-14871939)
chr5 (83-183)||(16736911-16737008)
chr5 (83-183)||(40952176-40952273)
chr5 (83-183)||(1099001-1099098)
chr5 (83-183)||(2467168-2467265)
chr5 (83-179)||(3279301-3279394)
chr5 (83-183)||(13697427-13697524)
chr5 (83-179)||(32772104-32772197)
chr5 (83-183)||(33429641-33429738)
chr5 (84-183)||(2961003-2961099)
chr5 (84-183)||(2969471-2969567)
chr5 (104-179)||(2426355-2426430)
chr5 (104-183)||(12854684-12854763)
chr5 (83-183)||(13577374-13577469)
chr5 (104-183)||(24858529-24858608)
chr5 (83-183)||(7601702-7601799)
chr5 (83-179)||(18707378-18707471)
chr5 (107-180)||(3974325-3974398)
chr5 (104-180)||(5239404-5239480)
chr5 (83-176)||(3168201-3168291)
chr5 (104-183)||(7610372-7610451)
chr5 (104-183)||(37092288-37092367)
chr5 (84-183)||(13455785-13455881)
chr5 (83-181)||(33381537-33381632)
chr5 (107-179)||(37943654-37943726)
chr5 (104-183)||(8357191-8357270)
chr5 (83-180)||(31618279-31618373)
chr5 (105-183)||(1643648-1643726)
chr5 (83-183)||(19984368-19984465)
chr5 (83-183)||(42610889-42610986)
chr5 (83-174)||(2492782-2492869)
chr5 (104-183)||(6540094-6540173)
chr5 (107-183)||(30129602-30129678)
chr5 (83-183)||(19130979-19131076)
chr5 (83-183)||(22621156-22621253)
chr5 (128-183)||(31486066-31486121)
chr5 (83-162)||(39589706-39589782)
chr5 (104-169)||(15858132-15858197)
chr5 (104-176)||(23226724-23226796)
chr5 (104-183)||(12875775-12875855)
chr5 (104-160)||(14729578-14729634)
chr5 (124-183)||(34159286-34159345)
chr5 (151-183)||(35160601-35160633)
[»] chr4 (48 HSPs)
chr4 (83-183)||(41935601-41935698)
chr4 (83-179)||(9902766-9902862)
chr4 (84-179)||(46648182-46648274)
chr4 (104-183)||(5747984-5748063)
chr4 (104-179)||(32188027-32188102)
chr4 (83-180)||(32922175-32922269)
chr4 (83-180)||(52537991-52538085)
chr4 (104-183)||(52654041-52654120)
chr4 (83-183)||(10993733-10993830)
chr4 (83-183)||(26886719-26886816)
chr4 (104-183)||(18568134-18568213)
chr4 (104-179)||(35130922-35130997)
chr4 (104-183)||(41376710-41376789)
chr4 (104-179)||(45801331-45801406)
chr4 (83-179)||(7067355-7067448)
chr4 (83-183)||(16020065-16020162)
chr4 (83-183)||(17362407-17362504)
chr4 (83-179)||(25331930-25332023)
chr4 (83-183)||(44835082-44835179)
chr4 (83-178)||(26842908-26843000)
chr4 (84-183)||(39792026-39792122)
chr4 (104-183)||(23572710-23572789)
chr4 (104-183)||(45655802-45655881)
chr4 (83-183)||(20984023-20984120)
chr4 (83-179)||(22539800-22539893)
chr4 (83-179)||(44551023-44551116)
chr4 (83-169)||(46689280-46689363)
chr4 (104-183)||(15516431-15516510)
chr4 (104-183)||(32488693-32488772)
chr4 (83-183)||(16530426-16530523)
chr4 (83-183)||(36868141-36868238)
chr4 (107-179)||(31857694-31857766)
chr4 (108-176)||(49387299-49387367)
chr4 (104-183)||(24270471-24270550)
chr4 (83-183)||(38556050-38556147)
chr4 (104-183)||(46674717-46674796)
chr4 (107-176)||(23962976-23963045)
chr4 (83-179)||(26948100-26948185)
chr4 (132-183)||(54036973-54037024)
chr4 (104-169)||(37068738-37068801)
chr4 (104-183)||(18635949-18636028)
chr4 (83-176)||(30637054-30637144)
chr4 (108-183)||(53563253-53563328)
chr4 (84-183)||(9644866-9644967)
chr4 (105-163)||(43264199-43264258)
chr4 (134-176)||(48129674-48129716)
chr4 (83-183)||(54996965-54997062)
chr4 (135-176)||(49498541-49498582)
[»] chr3 (46 HSPs)
chr3 (83-179)||(11989623-11989716)
chr3 (83-183)||(15543107-15543204)
chr3 (104-183)||(20209259-20209338)
chr3 (83-183)||(29434409-29434506)
chr3 (83-183)||(44664729-44664826)
chr3 (83-179)||(49002348-49002441)
chr3 (104-179)||(11439926-11440001)
chr3 (104-183)||(28843858-28843937)
chr3 (104-179)||(44036812-44036887)
chr3 (83-183)||(11221101-11221198)
chr3 (105-179)||(21017034-21017108)
chr3 (83-183)||(46292690-46292787)
chr3 (84-183)||(2862810-2862906)
chr3 (107-183)||(18678022-18678098)
chr3 (104-183)||(18168880-18168959)
chr3 (104-183)||(35747818-35747897)
chr3 (83-183)||(6954105-6954202)
chr3 (83-183)||(39778388-39778485)
chr3 (83-179)||(43378243-43378336)
chr3 (83-183)||(45539941-45540038)
chr3 (107-180)||(40612396-40612469)
chr3 (107-183)||(31574362-31574438)
chr3 (107-183)||(45567517-45567593)
chr3 (83-183)||(14201904-14202001)
chr3 (83-183)||(15020381-15020478)
chr3 (83-183)||(38675090-38675187)
chr3 (83-183)||(45171687-45171784)
chr3 (83-183)||(45214486-45214583)
chr3 (104-183)||(18461746-18461825)
chr3 (104-183)||(27812676-27812755)
chr3 (83-179)||(44920006-44920099)
chr3 (83-183)||(44976862-44976959)
chr3 (104-183)||(41944002-41944081)
chr3 (83-175)||(13997034-13997123)
chr3 (83-183)||(25061410-25061506)
chr3 (104-170)||(50710990-50711056)
chr3 (104-177)||(14626262-14626335)
chr3 (110-183)||(53712360-53712433)
chr3 (83-179)||(14463235-14463329)
chr3 (104-170)||(2773278-2773344)
chr3 (127-183)||(26845039-26845095)
chr3 (104-183)||(2397912-2397991)
chr3 (104-166)||(50710829-50710891)
chr3 (128-183)||(2579227-2579282)
chr3 (136-183)||(44883242-44883289)
chr3 (150-183)||(32809263-32809296)
[»] chr2 (40 HSPs)
chr2 (83-183)||(1270218-1270315)
chr2 (83-183)||(11724725-11724822)
chr2 (85-183)||(42030648-42030743)
chr2 (83-183)||(1650612-1650709)
chr2 (83-183)||(9027133-9027230)
chr2 (83-183)||(10192194-10192291)
chr2 (83-183)||(16350700-16350797)
chr2 (83-179)||(17549182-17549275)
chr2 (83-183)||(23926500-23926597)
chr2 (83-179)||(26499519-26499612)
chr2 (83-183)||(44490413-44490510)
chr2 (83-180)||(30488188-30488282)
chr2 (104-183)||(31556856-31556935)
chr2 (104-183)||(33274506-33274585)
chr2 (83-179)||(9912025-9912118)
chr2 (83-183)||(10714117-10714214)
chr2 (83-183)||(29175033-29175130)
chr2 (83-183)||(29421802-29421899)
chr2 (83-183)||(42950628-42950725)
chr2 (83-183)||(341420-341517)
chr2 (107-183)||(11122753-11122829)
chr2 (104-183)||(2450197-2450276)
chr2 (83-180)||(3888979-3889073)
chr2 (104-183)||(13421200-13421279)
chr2 (83-183)||(11723814-11723911)
chr2 (83-179)||(22899127-22899220)
chr2 (83-183)||(28788975-28789072)
chr2 (83-183)||(35411986-35412083)
chr2 (83-183)||(40657409-40657506)
chr2 (107-183)||(15461364-15461440)
chr2 (104-183)||(1479137-1479215)
chr2 (83-180)||(22196035-22196129)
chr2 (83-183)||(22486104-22486202)
chr2 (104-183)||(18449482-18449558)
chr2 (83-182)||(3322106-3322199)
chr2 (104-181)||(19079385-19079462)
chr2 (84-165)||(20663818-20663896)
chr2 (107-182)||(37528166-37528242)
chr2 (134-183)||(14951852-14951901)
chr2 (107-183)||(18508584-18508660)
[»] chr6 (29 HSPs)
chr6 (83-183)||(9546519-9546616)
chr6 (83-183)||(13853250-13853347)
chr6 (83-183)||(17853751-17853848)
chr6 (83-183)||(22568872-22568969)
chr6 (104-179)||(25121623-25121698)
chr6 (83-183)||(685061-685158)
chr6 (83-179)||(3012021-3012114)
chr6 (83-183)||(8129642-8129739)
chr6 (105-179)||(9220216-9220290)
chr6 (107-183)||(28852297-28852373)
chr6 (104-179)||(1925229-1925304)
chr6 (104-179)||(9899308-9899383)
chr6 (83-180)||(24896280-24896374)
chr6 (83-183)||(2316598-2316695)
chr6 (83-183)||(8487970-8488067)
chr6 (83-183)||(13178331-13178428)
chr6 (83-183)||(20027882-20027979)
chr6 (104-179)||(3105730-3105805)
chr6 (83-183)||(2882991-2883088)
chr6 (84-180)||(21926173-21926266)
chr6 (83-183)||(24325100-24325197)
chr6 (83-183)||(2863688-2863785)
chr6 (126-183)||(11361898-11361955)
chr6 (83-183)||(24335644-24335742)
chr6 (104-183)||(12240589-12240669)
chr6 (113-179)||(1136879-1136946)
chr6 (104-179)||(14655189-14655264)
chr6 (104-176)||(4137349-4137420)
chr6 (108-183)||(25026105-25026181)
[»] scaffold0200 (1 HSPs)
scaffold0200 (84-183)||(4471-4567)
[»] scaffold0009 (1 HSPs)
scaffold0009 (83-183)||(258864-258961)
[»] scaffold0005 (1 HSPs)
scaffold0005 (104-183)||(257801-257880)
[»] scaffold0592 (1 HSPs)
scaffold0592 (83-179)||(8501-8594)
[»] scaffold0024 (1 HSPs)
scaffold0024 (104-176)||(107972-108044)
[»] scaffold0077 (1 HSPs)
scaffold0077 (104-179)||(10045-10120)
[»] scaffold0029 (1 HSPs)
scaffold0029 (83-183)||(73482-73579)
[»] scaffold0019 (1 HSPs)
scaffold0019 (104-179)||(44983-45057)
[»] scaffold0003 (1 HSPs)
scaffold0003 (144-183)||(323536-323575)


Alignment Details
Target: chr1 (Bit Score: 76; Significance: 4e-35; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 44344150 - 44344229
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  44344150 ttcttatgcaaacatagacgaagatcatagatttgaagactgaaataccataagaaaataaaatcatgaattttaagctt 44344229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 17504151 - 17504248
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17504151 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaagct 17504247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 179
Target Start/End: Original strand, 1501627 - 1501720
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||| |||||||||   |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1501627 caagcttcaaatctaatattct---tatgcaaacatagacgaaaatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaa 1501720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 9877609 - 9877512
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  9877609 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagct 9877513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 104 - 180
Target Start/End: Complemental strand, 4695124 - 4695048
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaag 180  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4695124 ttcttatgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaag 4695048  T

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Target: chr1; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 45315382 - 45315461
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  45315382 ttcttatgcaaacatagacaaagatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagctt 45315461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 5586693 - 5586596
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||| | ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  5586693 caagcttcaaatttaatattctt---atgcaaacatagacaaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagct 5586597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 8828687 - 8828784
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||| | | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8828687 caagcttcaaatctaatattct---tatgcaaacatagtcaatgatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaagct 8828783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 10296700 - 10296797
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||    
T  10296700 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaagattgaatgaccataataaaataaaatcatgaattttaagct 10296796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 179
Target Start/End: Original strand, 12650030 - 12650123
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||| |||||||||   |||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12650030 caagcttcaaatctaatattct---tatgcaaacataaacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaa 12650123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 84 - 183
Target Start/End: Complemental strand, 45286437 - 45286341
Alignment:
Q  84 aagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||| ||||||||||   |||||||||||||||| ||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||    
T  45286437 aagcttcaaatctaatattctt---atgcaaacatagacgaggatcatatatttgaagattgaaagacgataagaaaataaaatcatgaattttaagctt 45286341  T

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Target: chr1; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 48524620 - 48524696
Alignment:
Q  107 ttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  48524620 ttatgcaaacatagatgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaagctt 48524696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 6488998 - 6489077
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  6488998 ttcttatgcaaacatagacaaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagctt 6489077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 3459743 - 3459840
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   || |||||||| |||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  3459743 caagcttcaaatctaatattctt---atacaaacataaacgaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagct 3459839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 5618179 - 5618276
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   || |||||||| |||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  5618179 caagcttcaaatctaatattctt---atccaaacataaacgaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagct 5618275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 8853203 - 8853300
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   ||| |||||||||||| ||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  8853203 caagcttcaaatctaatattctt---atgtaaacatagacgaggatcatagatttgaagactgaatgaccataagaaaataaaatcatgaattttaagct 8853299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 35521329 - 35521425
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||    
T  35521329 caagcttcaaatctaatattctt---atgcaaacatagac-aagatcatagatttgaagactgaaaaaccataagaaaataaaatcatgaatgttaagct 35521424  T

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Target: chr1; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 40934624 - 40934527
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||||| |||||||||| |||||| ||||  |||||||||||||||||||||||||||||||||    
T  40934624 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcatagatctgaagactgaaggaccataagaaaataaaatcatgaattttaagct 40934528  T

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Target: chr1; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 179
Target Start/End: Complemental strand, 46283608 - 46283515
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||| ||||||| || |||||||||||||||||||||||||||    
T  46283608 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcatagatttgaaaattgaaagacaataagaaaataaaatcatgaattttaa 46283515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 107 - 180
Target Start/End: Complemental strand, 50208544 - 50208471
Alignment:
Q  107 ttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaag 180  Q
    |||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  50208544 ttatgcaaacatagacgaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaag 50208471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 83 - 177
Target Start/End: Complemental strand, 26095695 - 26095604
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaatttt 177  Q
    |||||||||||| ||||||||||   ||||||||||||||||  |||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  26095695 caagcttcaaatctaatattctt---atgcaaacatagacgagaatcatagatttgaagactgaaagaccataagaaaataaaatcatgaatttt 26095604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 43726334 - 43726410
Alignment:
Q  107 ttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||    
T  43726334 ttatgcaaacatagacgatgatcatagatttgaagattgaaagactataagaaaataaaattatgaattttaagctt 43726410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 83 - 181
Target Start/End: Complemental strand, 49021872 - 49021777
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagc 181  Q
    |||||||||||| |||||||||    ||||||| |||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  49021872 caagcttcaaatctaatattcta---atgcaaatatagacgaggatcatagatttgaagattgaaagaccataagaaattaaaatcatgaattttaagc 49021777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 34480310 - 34480389
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||||||||| || | ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  34480310 ttcttatgcaaacataaacaaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagctt 34480389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 50312193 - 50312114
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||| ||||||||| ||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||    
T  50312193 ttcttatgcaaccatagacgaggatcatagatttgaagactaaaagaccataagaaaataaaatcatgaattttaagctt 50312114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 8641053 - 8641150
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   ||| |||||||| ||| ||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  8641053 caagcttcaaatctaatattctt---atgaaaacatagccgatgatcatagatttgaagactgaaggaccataagaaaataaaatcatgaattttaagct 8641149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 179
Target Start/End: Complemental strand, 33471617 - 33471524
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||| |||| |||||||||| || |||||||||||||||||||||||||||    
T  33471617 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcataaatttaaagattgaaagactataagaaaataaaatcatgaattttaa 33471524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 40770327 - 40770253
Alignment:
Q  105 tcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||||||||||| ||||||||||||||||| ||||| | ||||||||||||||||||||||||||||    
T  40770327 tcttatgcaaacatagacgaggatcatagatttgaagactgaaagagcataagaaaataaaatcatgaattttaa 40770253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 107 - 179
Target Start/End: Original strand, 39672965 - 39673037
Alignment:
Q  107 ttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||||||||||||||||    
T  39672965 ttatgcaaacatagacgaggatcatgaatttgaagattgaaagaccataagaaaataaaatcatgaattttaa 39673037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 16515818 - 16515743
Alignment:
Q  108 tatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||| |||||||| ||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||    
T  16515818 tatgcaaatatagacgaggatcatagatttgaaaactgaaagaccataagaaaataaaatcatgaattttaagctt 16515743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 26874353 - 26874432
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||||||||| || | ||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||    
T  26874353 ttcttatgcaaacataaacaaggatcatagatttgaagactgaaagatcataagaaaataaaatcatgaattttaagctt 26874432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 104 - 179
Target Start/End: Complemental strand, 27547130 - 27547055
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||   ||||||||||||||||||||||||||||    
T  27547130 ttcttatgcaaacatagacgaggatcatagatttgaagactgaaagggcataagaaaataaaatcatgaattttaa 27547055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 32694514 - 32694417
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   ||||||||||| |||| ||||||| ||||||||| | ||  |||||||||||||||||||||||||||||||||    
T  32694514 caagcttcaaatctaatattctt---atgcaaacataaacgaggatcataaatttgaagactaaaggaccataagaaaataaaatcatgaattttaagct 32694418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 45569210 - 45569113
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||| ||||||||||||||||||   ||||||| |||||||| |||||||||||||||||  |||| | |||||||||||||||||||||||| ||||||    
T  45569210 caagtttcaaatataatattctt---atgcaaatatagacgaggatcatagatttgaagaccgaaagatcataagaaaataaaatcatgaattataagct 45569114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 104 - 179
Target Start/End: Original strand, 730925 - 731000
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    ||||||| ||||||||||||| ||||||| ||||||||| ||||| | ||||||||||||||||||||||||||||    
T  730925 ttcttatacaaacatagacgaggatcataaatttgaagactgaaagagcataagaaaataaaatcatgaattttaa 731000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 24234663 - 24234742
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||||||||||| ||||| |||| |||||||||||||||| |||| ||||||||||| ||||||||| ||||||    
T  24234663 ttcttatgcaaacatagatgaagaccataaatttgaagattgaaatgccattagaaaataaaaccatgaatttgaagctt 24234742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 104 - 179
Target Start/End: Original strand, 28554316 - 28554391
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||| ||| |||||||||| | ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  28554316 ttctcatgtaaacatagacaaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaa 28554391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 179
Target Start/End: Complemental strand, 48970888 - 48970813
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||||||| | || |||| ||||||||||||| |||| |||||||| |||||||||||||||||||||    
T  48970888 ttcttatgcaaacataaaagaggatcgtagatttgaagatggaaagaccataagtaaataaaatcatgaattttaa 48970813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 25012854 - 25012757
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||| ||   | |||||||||||| | |||||||||||||||||  | || ||||||||||||||||||||||||||||| |||    
T  25012854 caagcttcaaatctaatattttt---acgcaaacatagacaaggatcatagatttgaagaccggaagaccataagaaaataaaatcatgaattttatgct 25012758  T

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Target: chr1; HSP #40
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 30146206 - 30146260
Alignment:
Q  125 agatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  30146206 agatcatagatttgaagattgaaagactataagaaaataaaatcatgaattttaa 30146260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 16087158 - 16087089
Alignment:
Q  107 ttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattt 176  Q
    ||||||||||||||| ||||| ||||||||||||||||  |||  ||||||||||||||| |||||||||    
T  16087158 ttatgcaaacatagatgaagaccatagatttgaagattttaatgtcataagaaaataaaaccatgaattt 16087089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 176
Target Start/End: Original strand, 27065253 - 27065343
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattt 176  Q
    |||||||||||| ||||||||||   ||||||||| |||  |  || ||||||||||||| || || |||||||||||||||||||||||||||    
T  27065253 caagcttcaaatctaatattctt---atgcaaacagagaaaattattatagatttgaagactggaagaccataagaaaataaaatcatgaattt 27065343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 35214023 - 35214102
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||||||| ||| |||||||||| ||||||| |||||||  ||||| |||||||||| |||||| || ||||||    
T  35214023 ttcttatgcaaacaaagatgaagatcataaatttgaatattgaaaggccatacgaaaataaaaccatgaacttgaagctt 35214102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 183
Target Start/End: Complemental strand, 45749381 - 45749327
Alignment:
Q  129 catagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||| ||||||||||||||||  ||||| ||||| ||||||||||||| ||||||    
T  45749381 catatatttgaagattgaaatgtcataacaaaatgaaatcatgaatttgaagctt 45749327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 41387 - 41484
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41387 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaagct 41483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 2e-34; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 33279142 - 33279045
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33279142 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaagct 33279046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 42684896 - 42684993
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42684896 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaagct 42684992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 39198725 - 39198822
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  39198725 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagct 39198821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 17494849 - 17494928
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  17494849 ttcttatgcaaacatagacgaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagctt 17494928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 21660853 - 21660932
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  21660853 ttcttatgcaaacatagacaaagatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagctt 21660932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 29596590 - 29596511
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29596590 ttcttatgcaaacatagacgagtatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaagctt 29596511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 29726653 - 29726732
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  29726653 ttcttatgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcataaattttaagctt 29726732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 1235772 - 1235693
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||| ||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  1235772 ttcttatgcaaacatagacaaagattatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagctt 1235693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 4968136 - 4968215
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  4968136 ttcttatgcaaacatagataaagatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagctt 4968215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 9887323 - 9887244
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  9887323 ttcttatgcaaacatagataaagatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagctt 9887244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 27712952 - 27712873
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  27712952 ttcttatgcaaacatagacaaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagctt 27712873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 8156914 - 8156817
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||| | ||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  8156914 caagcttcaaatctaatattctt---atgcaaacatagaccaggattatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagct 8156818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 33527048 - 33527145
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    ||||| |||||||||||||||||   |  ||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  33527048 caagcatcaaatataatattctt---aaacaaacatagacgaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagct 33527144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 179
Target Start/End: Complemental strand, 36556741 - 36556648
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||| ||||||||||   ||| |||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  36556741 caagcttcaaatctaatattctt---atgtaaacatagacgatgatcataaatttgaagattgaaagaccataagaaaataaaatcatgaattttaa 36556648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 106 - 183
Target Start/End: Original strand, 40277350 - 40277427
Alignment:
Q  106 cttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||| ||||||||||||||||| || || ||||||||||||||||||||||||||||||||||    
T  40277350 cttatgcaaacatagacgaggatcatagatttgaagactggaagaccataagaaaataaaatcatgaattttaagctt 40277427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 10925228 - 10925307
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||||||||| || | |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  10925228 ttcttatgcaaacataaacaaggatcatagatctgaagattgaaagaccataagaaaataaaatcatgaattttaagctt 10925307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 28828342 - 28828421
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||    
T  28828342 ttcttatgcaaacatagacaaggatcatagatttgaagactgaaagaccataagaaaataaaagcatgaattttaagctt 28828421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 30253752 - 30253831
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||    
T  30253752 ttcttatgcaaacatagacaaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgacttttaagctt 30253831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 30464102 - 30464023
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||| | ||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||    
T  30464102 ttcttatgcaaacatagacaaggatcatagatttgaacactgaaagaccataagaaaataaaatcatgaattttaagctt 30464023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 41617228 - 41617157
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaatt 175  Q
    |||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  41617228 ttcttatgcaaacatagacgagaatcatagatttgaagattgaaagaccataagaaaataaaatcatgaatt 41617157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 34198943 - 34199040
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   |||||||||||||| || |||||||||||||||||  |||| || ||||||||||||||||||||||||||||||    
T  34198943 caagcttcaaatttaatattct---tatgcaaacatagaagaggatcatagatttgaagaccgaaagactataagaaaataaaatcatgaattttaagct 34199039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 34632431 - 34632334
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||| ||   |||||||||||||| | ||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||    
T  34632431 caagcttcaaatttaatattttt---atgcaaacatagacaatgatcatagatttgaagactgaaagaccataagaaaataaaattatgaattttaagct 34632335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 104 - 180
Target Start/End: Complemental strand, 18929888 - 18929812
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaag 180  Q
    ||||||| |||||||||||||||||||||||||| |||| ||||  |||||||||||||||||||||||||||||||    
T  18929888 ttcttatacaaacatagacgaagatcatagatttaaagactgaaggaccataagaaaataaaatcatgaattttaag 18929812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 18805933 - 18805855
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||||||||| |||| ||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  18805933 ttcttatgcaaacatatacgaggatcatatatttgaagattgaaagaccataagaaaa-aaaatcatgaattttaagctt 18805855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 26938294 - 26938391
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   || ||||||||||| | ||| |||||||| |||| ||||| |||||||||||||||||||||||||||||||||    
T  26938294 caagcttcaaatctaatattctt---atacaaacatagaccaggattatagatttaaagactgaaagaccataagaaaataaaatcatgaattttaagct 26938390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 43497315 - 43497412
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||||| |||||||   |||||||||||||| ||||| |||| |||||||||||||||| |||||| ||||||||| ||||||||| |||||    
T  43497315 caagcttcaaatatgatattct---tatgcaaacatagatgaagaccataaatttgaagattgaaatgccataaaaaaataaaaccatgaatttgaagct 43497411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 37727387 - 37727308
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||| | || |||| ||||||||| ||||| ||||||||||||||||||||| ||||||||||||    
T  37727387 ttcttatgcaaacatagacaaggaacataaatttgaagactgaaagaccataagaaaataaaatcattaattttaagctt 37727308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 26187316 - 26187237
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||||||||||| ||||| ||||||||||||||||| ||  |||||| ||||||||| ||||||||| ||||||    
T  26187316 ttcttatgcaaacatagaagaagaccatagatttgaagattggaaggccataaaaaaataaaaccatgaatttgaagctt 26187237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 83 - 167
Target Start/End: Original strand, 148401 - 148482
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaat 167  Q
    |||||||||||| |||||||||   |||||||||||||| || ||||||||||||||||| ||||  ||||||||||||||||||    
T  148401 caagcttcaaatttaatattct---tatgcaaacatagatgaggatcatagatttgaagactgaaggaccataagaaaataaaat 148482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 176
Target Start/End: Original strand, 12649588 - 12649678
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattt 176  Q
    |||||||||||| |||||||||   |||||||||||||| | ||| || | |||| |||||||||| ||||||||||||||||| |||||||||    
T  12649588 caagcttcaaatctaatattct---tatgcaaacatagatggagaccacatatttaaagattgaaagaccataagaaaataaaaccatgaattt 12649678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 2241656 - 2241580
Alignment:
Q  108 tatgcaaacatagacgaa-gatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||||||| ||| ||||||||||||||||||||  |  |||||||||||||||| ||||||||| ||||||    
T  2241656 tatgcaaacatagatgaaagatcatagatttgaagattgggaggccataagaaaataaaaccatgaatttgaagctt 2241580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 88 - 176
Target Start/End: Complemental strand, 17958999 - 17958913
Alignment:
Q  88 ttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattt 176  Q
    ||||||| |||||||||| ||   |||||||| | ||||| |||| |||||||||||| ||| |||||||||||||||| | |||||||    
T  17958999 ttcaaatctaatattctttttt--caaacatatatgaagaccataaatttgaagattggaatgccataagaaaataaaaccgtgaattt 17958913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 169
Target Start/End: Complemental strand, 38229798 - 38229733
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatca 169  Q
    ||||||| ||||||||||  |||| | |||||||||||||||||| ||| ||  ||||||||||||    
T  38229798 ttcttatacaaacatagataaagaccgtagatttgaagattgaaagaccctagaaaaataaaatca 38229733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 8949400 - 8949497
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8949400 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaagct 8949496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 43575268 - 43575171
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||||||||||||||   |||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  43575268 caagcttcaaatataatattctt---atgcaaacatagacgaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagct 43575172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 46738470 - 46738373
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  46738470 caagcttcaaatctaatattctt---atgcaaacatagacgatgatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaagct 46738374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 7149417 - 7149496
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7149417 ttcttatgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaagctt 7149496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 179
Target Start/End: Original strand, 8805852 - 8805945
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8805852 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaa 8805945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 11338098 - 11338001
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  11338098 caagcttcaaatctaatattctt---atgcaaacatagacgatgatcatagatttgaagattgaaggaccataagaaaataaaatcatgaattttaagct 11338002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 179
Target Start/End: Complemental strand, 31116004 - 31115911
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||||||||||||||   |||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31116004 caagcttcaaatataatattctt---atgcaaacatagacgaggatgatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaa 31115911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 179
Target Start/End: Original strand, 45055430 - 45055523
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  45055430 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaa 45055523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 19104461 - 19104382
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  19104461 ttcttatgcaaacatagacgaggatcatagatttgaagactgaaaaaccataagaaaataaaatcatgaattttaagctt 19104382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 34287704 - 34287625
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  34287704 ttcttatgcaaacatagacgaggatcatagatttgaagattgaaagatcataagaaaataaaatcatgaattttaagctt 34287625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 83 - 180
Target Start/End: Original strand, 42391404 - 42391498
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaag 180  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  42391404 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaag 42391498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 7173137 - 7173040
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||| | ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  7173137 caagcttcaaatttaatattctt---atgcaaacatagacaaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagct 7173041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 12424051 - 12423954
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  12424051 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcatagatttgaagactgaaggaccataagaaaataaaatcatgaattttaagct 12423955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 20121411 - 20121314
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  20121411 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcatagatttgaagactgaaggaccataagaaaataaaatcatgaattttaagct 20121315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 31813936 - 31813839
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||    
T  31813936 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcatagatttgaagatcgaaagaccataagaaaataaaatcataaattttaagct 31813840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 41857249 - 41857346
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  41857249 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaagactgaaggaccataagaaaataaaatcatgaattttaagct 41857345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 44457892 - 44457989
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  44457892 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaagactgaaggaccataagaaaataaaatcatgaattttaagct 44457988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 45867651 - 45867554
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   || ||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  45867651 caagcttcaaatctaatattctt---atacaaacatagacgaggatcatagatttgaagattgaaagatcataagaaaataaaatcatgaattttaagct 45867555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 84 - 179
Target Start/End: Original strand, 41922391 - 41922483
Alignment:
Q  84 aagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    ||||||||||| |||||||||   ||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41922391 aagcttcaaatctaatattct---tatgcaaacatagactaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaa 41922483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 16860996 - 16861075
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||| |||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||    
T  16860996 ttcttatgcaaacatagacaaagatcatagatttaaagactgaaagaccataagaaaataaaatcatgaattttaagctt 16861075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 31283280 - 31283359
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||||| || |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  31283280 ttcttatgcaaacatagacgaggaacatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagctt 31283359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 17173197 - 17173294
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||||||| |||||||||||||||||  |||  |||||||||||||||||||||||||||||||||    
T  17173197 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaagaccgaaggaccataagaaaataaaatcatgaattttaagct 17173293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 24331487 - 24331584
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||| ||||  ||||||| |||||||||||||||||||||||||    
T  24331487 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaagactgaaggaccataaaaaaataaaatcatgaattttaagct 24331583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 38495120 - 38495023
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   || |||||||| |||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  38495120 caagcttcaaatctaatattctt---atccaaacataaacgaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagct 38495024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 45062268 - 45062171
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   || |||||||| |||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  45062268 caagcttcaaatctaatattctt---atccaaacataaacgaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagct 45062172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 47221913 - 47221816
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   || |||||||||| |||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  47221913 caagcttcaaatctaatattctt---atacaaacatagatgaagatcatagatttgaagactgaaggaccataagaaaataaaatcatgaattttaagct 47221817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 21627121 - 21627042
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||| || |||||||||||||||||||||||||||||||    
T  21627121 ttcttatgcaaacatagacgatgatcatagatttgaaggctgaaagacaataagaaaataaaatcatgaattttaagctt 21627042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 179
Target Start/End: Complemental strand, 2699823 - 2699730
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||| ||||||||||   ||||||||||||| || ||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||    
T  2699823 caagcttcaaatctaatattctt---atgcaaacatagaagaggatcatagatttgaagactgaaagaccataagaaaataaaatcataaattttaa 2699730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 109 - 183
Target Start/End: Complemental strand, 8522507 - 8522433
Alignment:
Q  109 atgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||| || ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  8522507 atgcaaacatagaagatgatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagctt 8522433  T

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Target: chr7; HSP #30
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 179
Target Start/End: Original strand, 21733176 - 21733269
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    ||||||| ||||||||||||||   |||||||||||||||||  |||||| ||||||||| ||||| ||||||||||||||||||||||||||||||    
T  21733176 caagcttaaaatataatattct---tatgcaaacatagacgagaatcatacatttgaagactgaaagaccataagaaaataaaatcatgaattttaa 21733269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 104 - 180
Target Start/End: Complemental strand, 41749768 - 41749692
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaag 180  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||  || ||||||||||||||||||||||||||||    
T  41749768 ttcttatgcaaacatagacgaggatcatagatttgaagactgaatgactataagaaaataaaatcatgaattttaag 41749692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 11682110 - 11682031
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||||||||||| || ||| ||||||||||| | ||||| ||||||||||||||||||||||||||||||||||    
T  11682110 ttcttatgcaaacatagatgaggattatagatttgaaaactgaaagaccataagaaaataaaatcatgaattttaagctt 11682031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 21455680 - 21455759
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||||| ||||||||||||||| | || || ||||||||||||||||||||||| ||||||||||    
T  21455680 ttcttatgcaaacatagacgaggatcatagatttgaaaactggaagaccataagaaaataaaatcatgatttttaagctt 21455759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 104 - 179
Target Start/End: Complemental strand, 49023766 - 49023691
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||| |||||||| ||||||||    
T  49023766 ttcttatgcaaacatagacgatgattatagatttgaagattgaaagaccataagaaaagaaaatcataaattttaa 49023691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 23036835 - 23036756
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||||||||| |||| |||||||||||||||||   ||| | ||||||||||||||||||||||||||||||||    
T  23036835 ttcttatgcaaacataaacgaggatcatagatttgaagaccaaaagatcataagaaaataaaatcatgaattttaagctt 23036756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 32165347 - 32165426
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||| |||||||| ||||| ||||||||||| |||| ||||| | ||||||||||||||||||||||||||||||||    
T  32165347 ttcttattcaaacataaacgaaaatcatagatttaaagactgaaagagcataagaaaataaaatcatgaattttaagctt 32165426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 43268117 - 43268038
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||||| ||||  ||||||||||||||||||||||||||| |||||||||||||||| ||| ||||| ||||||    
T  43268117 ttcttatgcaaatatagttgaagatcatagatttgaagattgaaatgccataagaaaataaaaccataaatttaaagctt 43268038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 46426849 - 46426770
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||||||||||| || |||||||| |||||| ||||||| ||||||||||||||||| ||||||| ||||||||    
T  46426849 ttcttatgcaaacatagatgaggatcatagttttgaatattgaaagaccataagaaaataaaaccatgaatattaagctt 46426770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 19125016 - 19124940
Alignment:
Q  107 ttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||| |||| ||||||| ||||||||| ||||| || ||||| |||||||||||||||||||||||||    
T  19125016 ttatgcaaacataaacgaggatcatatatttgaagactgaaaaactataagtaaataaaatcatgaattttaagctt 19124940  T

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Target: chr7; HSP #40
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 49114459 - 49114386
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||      ||||||||||||||||||||||||||    
T  49114459 ttcttatgcaaacatagacgaggatcatagatttgaagattgaaagac------aaaataaaatcatgaattttaagctt 49114386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 48766046 - 48765974
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattt 176  Q
    |||||||| ||| ||||| ||||| |||| |||||||||||||||| |||||||||||||||| |||||||||    
T  48766046 ttcttatgtaaaaatagatgaagaccataaatttgaagattgaaatgccataagaaaataaaaccatgaattt 48765974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 32064516 - 32064594
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||| ||||||||| ||| | |||| ||||||||||||||||  ||||  ||||||||| ||||||||| ||||||    
T  32064516 ttcttatgtaaacatagatgaaaaccataaatttgaagattgaaat-gcatataaaaataaaaccatgaatttaaagctt 32064594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 10543559 - 10543616
Alignment:
Q  126 gatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||| |||||||||||||||  |||||||||| ||||| ||| ||||| ||||||    
T  10543559 gatcatatatttgaagattgaaaggccataagaaattaaaaccataaatttgaagctt 10543616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 2e-34; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 14871842 - 14871939
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14871842 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaagattgaaaaaccataagaaaataaaatcatgaattttaagct 14871938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 16736911 - 16737008
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  16736911 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaagct 16737007  T

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Target: chr5; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 40952176 - 40952273
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  40952176 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaagct 40952272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 1099098 - 1099001
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1099098 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcataaatttgaagattgaaagaccataagaaaataaaatcatgaattttaagct 1099002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 2467265 - 2467168
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  2467265 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagct 2467169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 179
Target Start/End: Complemental strand, 3279394 - 3279301
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3279394 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaa 3279301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 13697524 - 13697427
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  13697524 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcatagatttgaagattgaaagaccataaaaaaataaaatcatgaattttaagct 13697428  T

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Target: chr5; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 179
Target Start/End: Complemental strand, 32772197 - 32772104
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  32772197 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaa 32772104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 33429641 - 33429738
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33429641 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatatatttgaagattgaaagaccataagaaaataaaatcatgaattttaagct 33429737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 84 - 183
Target Start/End: Complemental strand, 2961099 - 2961003
Alignment:
Q  84 aagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||| ||||||||||   |||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  2961099 aagcttcaaatctaatattctt---atgcaaacatagacgatgatcatagatttgaagatcgaaagaccataagaaaataaaatcatgaattttaagctt 2961003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 84 - 183
Target Start/End: Complemental strand, 2969567 - 2969471
Alignment:
Q  84 aagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||| ||||||||||   |||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  2969567 aagcttcaaatctaatattctt---atgcaaacatagacgatgatcatagatttgaagatcgaaagaccataagaaaataaaatcatgaattttaagctt 2969471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 104 - 179
Target Start/End: Original strand, 2426355 - 2426430
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2426355 ttcttatgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaa 2426430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 12854763 - 12854684
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  12854763 ttcttatgcaaacatagacgaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagctt 12854684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 13577469 - 13577374
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||    
T  13577469 caagcttcaaatctaatattctt---atgcaaacatagacgaagatcatagatttgaagattgaaagaccataagaaa--aaaatcatgaattttaagct 13577375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 24858529 - 24858608
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  24858529 ttcttatgcaaacatagacgaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagctt 24858608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 7601799 - 7601702
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||    
T  7601799 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcatagatttgaagactgaaagacgataagaaaataaaatcatgaattttaagct 7601703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 179
Target Start/End: Original strand, 18707378 - 18707471
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  18707378 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcataaatttgaagattgaaaaaccataagaaaataaaatcatgaattttaa 18707471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 107 - 180
Target Start/End: Complemental strand, 3974398 - 3974325
Alignment:
Q  107 ttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaag 180  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3974398 ttatgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaag 3974325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 5239404 - 5239480
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaag 180  Q
    ||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  5239404 ttcttatgcaaacatagacaaagatcataaatttgaagactgaaataccataagaaaataaaatcatgaattttaag 5239480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 83 - 176
Target Start/End: Original strand, 3168201 - 3168291
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattt 176  Q
    ||||||||||||||||||||||   ||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||||||||||||||||    
T  3168201 caagcttcaaatataatattct---tatgcaaacatagacgaggatcatataattgaagattgaaagaccataagaaaataaaatcatgaattt 3168291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 7610451 - 7610372
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  7610451 ttcttatgcaaacatagacgaggatcatagatttgaagactgaaatagtataagaaaataaaatcatgaattttaagctt 7610372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 37092367 - 37092288
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  37092367 ttcttatgcaaacatagacaaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagctt 37092288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 84 - 183
Target Start/End: Original strand, 13455785 - 13455881
Alignment:
Q  84 aagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||| |||||||||    |||||||||||||||| ||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||    
T  13455785 aagcttcaaatctaatattcta---atgcaaacatagacgaggatcatagatttgaagactgaaggaccataagaaaataaaatcatgaattttaagctt 13455881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 83 - 181
Target Start/End: Original strand, 33381537 - 33381632
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagc 181  Q
    |||||||||||| |||||||||   |||||||| |||||||| ||||||| ||||||||||||||| || |||||||||||||||||||||||||||||    
T  33381537 caagcttcaaatctaatattct---tatgcaaaaatagacgaggatcataaatttgaagattgaaagactataagaaaataaaatcatgaattttaagc 33381632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 107 - 179
Target Start/End: Original strand, 37943654 - 37943726
Alignment:
Q  107 ttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  37943654 ttatgcaaacatagacgaggatcatagatttgaagattgaaagactataagaaaataaaatcatgaattttaa 37943726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 8357191 - 8357270
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||    
T  8357191 ttcttatgcaaacatagacaaggatcatagatttgaagactgaaagacaataagaaaataaaatcatgaattttaagctt 8357270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 180
Target Start/End: Complemental strand, 31618373 - 31618279
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaag 180  Q
    |||||||||||| ||||||||||   |||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||||||| |||||||||    
T  31618373 caagcttcaaatctaatattctt---atgcaaacatagacgaagattatagatttgtagactgaaagaccataagaaaataaaatcataaattttaag 31618279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 105 - 183
Target Start/End: Complemental strand, 1643726 - 1643648
Alignment:
Q  105 tcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||    
T  1643726 tcttatgcaaacatagaagaggatcatagatttgaagactgaaagaccataagaaaataaaatcataaattttaagctt 1643648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 19984368 - 19984465
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   ||| ||||||||| ||| |||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||    
T  19984368 caagcttcaaatctaatattctt---atgaaaacatagaagaatatcatagatttgaagactgaaagaccgtaagaaaataaaatcatgaattttaagct 19984464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 42610889 - 42610986
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   |||||||||||||||||  || ||||||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  42610889 caagcttcaaatctaatattct---tatgcaaacatagacgagaattatagatttgaagactgaaggaccataagaaaataaaatcatgaattttaagct 42610985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 174
Target Start/End: Complemental strand, 2492869 - 2492782
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaat 174  Q
    |||||||||||| ||||||||||   ||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2492869 caagcttcaaatctaatattctt---atgtaaacatagacga-gatcatagatttgaagattgaaagaccataagaaaataaaatcatgaat 2492782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 6540173 - 6540094
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||| ||||||||||||| ||||||||||||||||| | ||  ||||||||||||||||||||||||||||||||||    
T  6540173 ttcttatccaaacatagacgaggatcatagatttgaagacttaaggaccataagaaaataaaatcatgaattttaagctt 6540094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 30129602 - 30129678
Alignment:
Q  107 ttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||||||||| | ||||||||||||||||| | ||  ||||||||||||||||||||||||||||||||||    
T  30129602 ttatgcaaacatagacaaggatcatagatttgaagactcaaggaccataagaaaataaaatcatgaattttaagctt 30129678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 19131076 - 19130979
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   || |||||||| |||| ||||||||||||||| | ||||| ||||||||||||||||||||||||| | |||||    
T  19131076 caagcttcaaatctaatattctt---atccaaacataaacgaggatcatagatttgaaaactgaaagaccataagaaaataaaatcatgaatataaagct 19130980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 22621253 - 22621156
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||| ||   ||||||||||||| || ||||||| ||||||||| | ||  |||||||||||||||||||||||||||||||||    
T  22621253 caagcttcaaatctaatattatt---atgcaaacatagatgaggatcataaatttgaagactcaaggaccataagaaaataaaatcatgaattttaagct 22621157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 31486121 - 31486066
Alignment:
Q  128 tcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  31486121 tcatagatttgaagattgaaagacgataagaaaataaaatcatgaattttaagctt 31486066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 39589782 - 39589706
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaat 162  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||| ||||  |||||| ||||||    
T  39589782 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcatagatttgaagactgaaggaccatatgaaaat 39589706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 169
Target Start/End: Original strand, 15858132 - 15858197
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatca 169  Q
    ||||||| | ||||||||  |||||||||||||| |||||||||||| |||| |||||||||||||    
T  15858132 ttcttatacgaacatagataaagatcatagatttaaagattgaaatatcatacgaaaataaaatca 15858197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 23226796 - 23226724
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattt 176  Q
    |||||||| ||||||||| ||||| ||||||||| ||||||||||   |||||||||||||||  ||||||||    
T  23226796 ttcttatgtaaacatagatgaagaccatagatttaaagattgaaaggtcataagaaaataaaactatgaattt 23226724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 12875855 - 12875775
Alignment:
Q  104 ttcttatgcaaacataga-cgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||   || | ||||||||||||||||||||  |||| ||||||||||| ||| ||||| ||||||    
T  12875855 ttcttatgcaaacatagataaaaaaccatagatttgaagattgaaaggccatcagaaaataaaaccataaatttgaagctt 12875775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 160
Target Start/End: Complemental strand, 14729634 - 14729578
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaa 160  Q
    ||||||||||||||||||| | |||||||||||| |||| | ||| |||||||||||    
T  14729634 ttcttatgcaaacatagacaaggatcatagatttaaagactaaaagaccataagaaa 14729578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 124 - 183
Target Start/End: Complemental strand, 34159345 - 34159286
Alignment:
Q  124 aagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||| |||||||| |||||||| |  ||||||||||||||| |||||||||| ||||||    
T  34159345 aagattatagatttaaagattgagaggccataagaaaataaagtcatgaatttgaagctt 34159286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 35160601 - 35160633
Alignment:
Q  151 ccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||||||||||||||||||| ||||||    
T  35160601 ccataagaaaataaaatcatgaatttgaagctt 35160633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 41935601 - 41935698
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41935601 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaagct 41935697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 83 - 179
Target Start/End: Complemental strand, 9902862 - 9902766
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||| ||||||| || |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  9902862 caagcttcaaatctaatattattattatgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcataaattttaa 9902766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 84 - 179
Target Start/End: Complemental strand, 46648274 - 46648182
Alignment:
Q  84 aagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    ||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  46648274 aagcttcaaatctaatattctt---atgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaa 46648182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 5748063 - 5747984
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  5748063 ttcttatgcaaacatagacgaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagctt 5747984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 104 - 179
Target Start/End: Complemental strand, 32188102 - 32188027
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  32188102 ttcttatgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaa 32188027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 83 - 180
Target Start/End: Original strand, 32922175 - 32922269
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaag 180  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  32922175 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaag 32922269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 83 - 180
Target Start/End: Complemental strand, 52538085 - 52537991
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaag 180  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  52538085 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcatagatttgaagactgaaaaaccataagaaaataaaatcatgaattttaag 52537991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 52654120 - 52654041
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  52654120 ttcttatgcaaacatagacgaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagctt 52654041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 10993733 - 10993830
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||||||||||| ||   |||||||||||||||| |||| |||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  10993733 caagcttcaaatataatattttt---atgcaaacatagacgaggatcgtagatttgaagattgaaagactataagaaaataaaatcatgaattttaagct 10993829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 26886816 - 26886719
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   ||| ||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26886816 caagcttcaaatctaatattctt---atgtaaacatagatgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaagct 26886720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 18568213 - 18568134
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||    
T  18568213 ttcttatgcaaacatagacgatgatcatagatttgaagactgaaagagcataagaaaataaaatcatgaattttaagctt 18568134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 104 - 179
Target Start/End: Original strand, 35130922 - 35130997
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  35130922 ttcttatgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaattatgaattttaa 35130997  T

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Target: chr4; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 41376710 - 41376789
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||||| ||||||||||||||||| || || ||||||||||||||||||||||||||||||||||    
T  41376710 ttcttatgcaaacatagacgaggatcatagatttgaagactggaagaccataagaaaataaaatcatgaattttaagctt 41376789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 104 - 179
Target Start/End: Complemental strand, 45801406 - 45801331
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  45801406 ttcttatgcaaacatagacgaggatcatagatttgaagattgaaagatcataagaaaataaaatcatgaattttaa 45801331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 179
Target Start/End: Complemental strand, 7067448 - 7067355
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  7067448 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcatagatttgaagactgaaacaccataaaaaaataaaatcatgaattttaa 7067355  T

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Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 16020065 - 16020162
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||| ||||  ||||||||||||||||||||| |||||||||||    
T  16020065 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaagactgaaggaccataagaaaataaaatcataaattttaagct 16020161  T

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Target: chr4; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 17362504 - 17362407
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||| ||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  17362504 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcataaatttgaagactgaaggaccataagaaaataaaatcatgaattttaagct 17362408  T

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Target: chr4; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 179
Target Start/End: Complemental strand, 25332023 - 25331930
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||| ||||||||||   |||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  25332023 caagcttcaaatctaatattctt---atgcaaacatagacgagggtcatagatttgaagattgaaagaccataagaaaataaaatcataaattttaa 25331930  T

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Target: chr4; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 44835179 - 44835082
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||| ||   |||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||    
T  44835179 caagcttcaaatctaatattttt---atgcaaacatagacgaggatcatagatttgaagattgaaaaaccataagaaagtaaaatcattaattttaagct 44835083  T

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Target: chr4; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 83 - 178
Target Start/End: Original strand, 26842908 - 26843000
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaatttta 178  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||||||||  || ||||||||||||||||||||||||||    
T  26842908 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaagattgaaggactataagaaaataaaatcatgaatttta 26843000  T

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Target: chr4; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 84 - 183
Target Start/End: Complemental strand, 39792122 - 39792026
Alignment:
Q  84 aagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||| ||||||| ||   |||||||||||||||| ||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||    
T  39792122 aagcttcaaatctaatattttt---atgcaaacatagacgatgatcatagatttgaagattgaaggaccatcagaaaataaaatcatgaattttaagctt 39792026  T

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Target: chr4; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 23572789 - 23572710
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||| | ||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  23572789 ttcttatgcaaacatagacaaggatcataaatttgaagattgaaagaccataagaaaataaaatcatgaattttcagctt 23572710  T

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Target: chr4; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 45655881 - 45655802
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||||| ||||||| ||||||||| ||||| ||||||||||||||||||||| ||||||||||||    
T  45655881 ttcttatgcaaacatagacgatgatcataaatttgaagactgaaagaccataagaaaataaaatcataaattttaagctt 45655802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 20984120 - 20984023
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||  ||||| | ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  20984120 caagcttcaaatttaatattctt---atgcaaatttagacaaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagct 20984024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 179
Target Start/End: Complemental strand, 22539893 - 22539800
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||| ||||||||||   ||||||||||||| || ||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  22539893 caagcttcaaatctaatattctt---atgcaaacatagaagaggattatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaa 22539800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 179
Target Start/End: Original strand, 44551023 - 44551116
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||| ||||||||||   || ||||||||||||| ||||||| |||||| |||||||| ||||||||||||||||||||||||||||||    
T  44551023 caagcttcaaatctaatattctt---atacaaacatagacgaggatcataaatttgaggattgaaagaccataagaaaataaaatcatgaattttaa 44551116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 46689363 - 46689280
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatca 169  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||    
T  46689363 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcatagatttgaagactgaaagaccataagaaaataaaatca 46689280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 15516431 - 15516510
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||| |||||||||||||||| ||||||||||||||||| ||||  ||||||||||||||| ||||||||||||||||||    
T  15516431 ttctaatgcaaacatagacgaggatcatagatttgaagactgaaggaccataagaaaataagatcatgaattttaagctt 15516510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 32488772 - 32488693
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||| | ||||||||||||||||| | ||| ||||||||||||||||||||| ||||||||||||    
T  32488772 ttcttatgcaaacatagacaaggatcatagatttgaagactaaaagaccataagaaaataaaatcataaattttaagctt 32488693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 16530426 - 16530523
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   |||||||  |||||||| ||| ||||||||||| ||||||| ||||||||||||||||||||| |||||||||||    
T  16530426 caagcttcaaatctaatattct---tatgcaagtatagacgaggataatagatttgaaaattgaaagaccataagaaaataaaatcataaattttaagct 16530522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 36868238 - 36868141
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||| ||   |||||||||||  | | ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  36868238 caagcttcaaatttaatattttt---atgcaaacataagcaaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagct 36868142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 179
Target Start/End: Complemental strand, 31857766 - 31857694
Alignment:
Q  107 ttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||||||| | ||||||||||||||||| ||||| |||||| |||||||||||||||||||||||    
T  31857766 ttatgcaaacatagacaaggatcatagatttgaagactgaaagaccataggaaaataaaatcatgaattttaa 31857694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 49387367 - 49387299
Alignment:
Q  108 tatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattt 176  Q
    |||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  49387367 tatgcaaacatagacgagaatcatagatttgaagactgaaataccataagaaaataaaatcacgaattt 49387299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 24270550 - 24270471
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||||||||||| ||  |||||| ||||||||| ||||| ||||||| ||||||||||||||||||||||||||    
T  24270550 ttcttatgcaaacatagaagagaatcataaatttgaagactgaaagaccataaaaaaataaaatcatgaattttaagctt 24270471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 38556050 - 38556147
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||| ||   || ||||||||||||| ||||||||||||||||| | ||| | ||||||||||||||||||||||| |||||||    
T  38556050 caagcttcaaatctaatattatt---atacaaacatagacgaggatcatagatttgaagactaaaagatcataagaaaataaaatcatgaatcttaagct 38556146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 46674717 - 46674796
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||| ||||||||||||| |||| |||||||||||||| ||| | ||||| ||||||||||||| ||||||||||||    
T  46674717 ttcttatacaaacatagacgaggatcgtagatttgaagattaaaagatcataaaaaaataaaatcataaattttaagctt 46674796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 23962976 - 23963045
Alignment:
Q  107 ttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattt 176  Q
    ||||||||||||||| ||| | |||||||||||||||||||||  ||||||||||||||| |||||||||    
T  23962976 ttatgcaaacatagatgaaaaccatagatttgaagattgaaatgtcataagaaaataaaaccatgaattt 23963045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 83 - 179
Target Start/End: Original strand, 26948100 - 26948185
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||||||||||||||   |||||||||||||||| |||        |||||||||||| ||||||||||||||||||||||||||||||    
T  26948100 caagcttcaaatataatattctt---atgcaaacatagacgatgat--------tgaagattgaaagaccataagaaaataaaatcatgaattttaa 26948185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 54037024 - 54036973
Alignment:
Q  132 agatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  54037024 agatttgaagattgaaagaccataagaaaataaaatcatgaatttgaagctt 54036973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 104 - 169
Target Start/End: Complemental strand, 37068801 - 37068738
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatca 169  Q
    |||||||||||||||||||| | |||||||||||||||||||||| | ||||||||||||||||||    
T  37068801 ttcttatgcaaacatagacgga-atcatagatttgaagattgaaaga-cataagaaaataaaatca 37068738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 18636028 - 18635949
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||| |||||||||| ||||| ||| ||||||||||||||||   ||||||||||||||| ||||| ||| ||||||    
T  18636028 ttcttatacaaacatagatgaagaccatggatttgaagattgaaaggtcataagaaaataaaagcatgagtttaaagctt 18635949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 176
Target Start/End: Original strand, 30637054 - 30637144
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattt 176  Q
    |||||||||||| ||||||||||   ||| |||||||||  ||||||||| |||||||||||||||| |||||| ||  ||||| |||||||||    
T  30637054 caagcttcaaatctaatattctt---atgtaaacatagataaagatcataaatttgaagattgaaatgccataaaaagttaaaaccatgaattt 30637144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 53563253 - 53563328
Alignment:
Q  108 tatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||||||| ||||| |||| ||||||||||||| |   | ||||||||||||| ||||||||||||||||    
T  53563253 tatgcaaacatagatgaagaccatatatttgaagattgagaggtcctaagaaaataaaaacatgaattttaagctt 53563328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 183
Target Start/End: Complemental strand, 9644967 - 9644866
Alignment:
Q  84 aagcttcaaatataatattcttcttatgcaaacatagacgaag-----atcatagatttgaagattgaaataccataagaaaataaaatcatgaatttta 178  Q
    |||||| |||||||||||||||   ||||||||||| | ||||     ||||||||||||||||  ||||  ||||||||||||||||||||| |||| |    
T  9644967 aagctttaaatataatattctt---atgcaaacataaatgaagatcatatcatagatttgaagacggaaaggccataagaaaataaaatcatggatttaa 9644871  T
Q  179 agctt 183  Q
    |||||    
T  9644870 agctt 9644866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 105 - 163
Target Start/End: Complemental strand, 43264258 - 43264199
Alignment:
Q  105 tcttatgcaaacatagacgaagatca-tagatttgaagattgaaataccataagaaaata 163  Q
    ||||||||||| |||||||| ||| | |||||||||||| ||||| ||||||||||||||    
T  43264258 tcttatgcaaatatagacgaggataaatagatttgaagactgaaagaccataagaaaata 43264199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 176
Target Start/End: Complemental strand, 48129716 - 48129674
Alignment:
Q  134 atttgaagattgaaataccataagaaaataaaatcatgaattt 176  Q
    |||| |||||| |||| ||||||||||||||||||||||||||    
T  48129716 atttaaagattaaaatgccataagaaaataaaatcatgaattt 48129674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 54996965 - 54997062
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||| |||||||||||||||||| ||   |||||||||| | ||| |||| |||  || |||||||||  |||||||||||||| ||| ||||| |||||    
T  54996965 caagtttcaaatataatattcttatt---caaacatagatggagaccataaattaaaaaattgaaatattataagaaaataaaaccataaatttgaagct 54997061  T

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Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 49498582 - 49498541
Alignment:
Q  135 tttgaagattgaaataccataagaaaataaaatcatgaattt 176  Q
    ||||||||||||||| |||| ||||||||||| |||||||||    
T  49498582 tttgaagattgaaatgccatgagaaaataaaaccatgaattt 49498541  T

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Target: chr3 (Bit Score: 75; Significance: 2e-34; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 179
Target Start/End: Original strand, 11989623 - 11989716
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    ||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11989623 caagcttcaaatataatattct---tatgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaa 11989716  T

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Target: chr3; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 15543107 - 15543204
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15543107 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaagct 15543203  T

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Target: chr3; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 20209338 - 20209259
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20209338 ttcttatgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaagctt 20209259  T

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Target: chr3; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 29434409 - 29434506
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  29434409 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaagattgatagaccataagaaaataaaatcatgaattttaagct 29434505  T

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Target: chr3; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 44664729 - 44664826
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  44664729 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcattgatttgaagattgaaagaccataagaaaataaaatcatgaattttaagct 44664825  T

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Target: chr3; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 179
Target Start/End: Complemental strand, 49002441 - 49002348
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  49002441 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaa 49002348  T

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Target: chr3; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 104 - 179
Target Start/End: Original strand, 11439926 - 11440001
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  11439926 ttcttatgcaaacatagacgaagatcatagatttgaagatggaaagaccataagaaaataaaatcatgaattttaa 11440001  T

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Target: chr3; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 28843858 - 28843937
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28843858 ttcttatgcaaacatagatgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaagctt 28843937  T

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Target: chr3; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 104 - 179
Target Start/End: Original strand, 44036812 - 44036887
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44036812 ttcttatgcaaacatagacgagaatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 44036887  T

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Target: chr3; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 11221198 - 11221101
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||| || || |||||||||||||||||||||||||||||||||    
T  11221198 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcatagatttgaagactggaagaccataagaaaataaaatcatgaattttaagct 11221102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 21017108 - 21017034
Alignment:
Q  105 tcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21017108 tcttatgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaa 21017034  T

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Target: chr3; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 46292690 - 46292787
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  46292690 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatatatttgaagattgaaagaccataagaaaataaaatcatgaatttcaagct 46292786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 84 - 183
Target Start/End: Complemental strand, 2862906 - 2862810
Alignment:
Q  84 aagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||| || || ||||||||||||||||||||||||||||||||||    
T  2862906 aagcttcaaatctaatattctt---atgcaaacatagacgaggatcatagatttgaagactggaagaccataagaaaataaaatcatgaattttaagctt 2862810  T

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Target: chr3; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 18678098 - 18678022
Alignment:
Q  107 ttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  18678098 ttatgcaaacatagacgaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagctt 18678022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 18168880 - 18168959
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||| || |||||||||||||||||||||||||||||||    
T  18168880 ttcttatgcaaacatagacgaagatcatatatttgaagactgaaagactataagaaaataaaatcatgaattttaagctt 18168959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 35747818 - 35747897
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||    
T  35747818 ttcttatgcaaacatagacgaggatcatagatttgaagactgaaagagcataagaaaataaaatcatgaattttaagctt 35747897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 6954105 - 6954202
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   || ||||||||||| | ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  6954105 caagcttcaaatctaatattctt---atacaaacatagacaaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagct 6954201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 39778485 - 39778388
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   ||||||||| |||||| |||||||||||||||||  |||| |||||||||||||||||||||||||||||||||    
T  39778485 caagcttcaaatctaatattctt---atgcaaacaaagacgaggatcatagatttgaagaccgaaagaccataagaaaataaaatcatgaattttaagct 39778389  T

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Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 179
Target Start/End: Complemental strand, 43378336 - 43378243
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||||||||||| ||   |||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||    
T  43378336 caagcttcaaatataatattgtt---atgcaaacatagacgaggatcatatatttgaagattgaaagaccataaaaaaataaaatcatgaattttaa 43378243  T

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Target: chr3; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 45540038 - 45539941
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||| ||   |||||||||||||||| ||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  45540038 caagcttcaaatctaatattttt---atgcaaacatagacgaggatcatagatttgaagactgaaggaccataagaaaataaaatcatgaattttaagct 45539942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 40612396 - 40612469
Alignment:
Q  107 ttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaag 180  Q
    |||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  40612396 ttatgcaaacatagacgatgatcatagatttgaagatttaaagaccataagaaaataaaatcatgaattttaag 40612469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 31574438 - 31574362
Alignment:
Q  107 ttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||||||||||  ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  31574438 ttatgcaaacatagacgctgatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagctt 31574362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 45567593 - 45567517
Alignment:
Q  107 ttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||  |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  45567593 ttatgcaaacatagacgagaatcatagatttgaagattgaaagaccataagaaaatgaaatcatgaattttaagctt 45567517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 14201904 - 14202001
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||| ||   ||| |||||||||||| ||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  14201904 caagcttcaaatctaatattttt---atgtaaacatagacgatgatcatagatttgaagactgaaggaccataagaaaataaaatcatgaattttaagct 14202000  T

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Target: chr3; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 15020381 - 15020478
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||| ||   |||||||||||||||| ||||||||||||||||| ||||| | |||||||| ||||||||||||||||||||||    
T  15020381 caagcttcaaatctaatattatt---atgcaaacatagacgaggatcatagatttgaagactgaaagatcataagaatataaaatcatgaattttaagct 15020477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 38675187 - 38675090
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   || |||||||| |||| |||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||    
T  38675187 caagcttcaaatctaatattctt---atacaaacataaacgaggatcatagatttaaagactgaaagaccataagaaaataaaatcatgaattttaagct 38675091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 45171784 - 45171687
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   ||||||| |||||||| |||| |||||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  45171784 caagcttcaaatctaatattctt---atgcaaaaatagacgaggatcgtagatttgaagactgaaggaccataagaaaataaaatcatgaattttaagct 45171688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 45214583 - 45214486
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   ||||||||||||||||  |||||||||||||||| | ||| |||||||||||||||||| ||||||||||||||    
T  45214583 caagcttcaaatctaatattctt---atgcaaacatagacgagaatcatagatttgaagactcaaagaccataagaaaataaaattatgaattttaagct 45214487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 18461746 - 18461825
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||||| |||||||| || ||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||    
T  18461746 ttcttatgcaaatatagacgacgaccatagatttaaagactgaaagaccataagaaaataaaatcatgaattttaagctt 18461825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 27812755 - 27812676
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||||| ||||||| | ||||||| ||||| | ||||||||||||||||||||||||||||||||    
T  27812755 ttcttatgcaaacatagacgaggatcataaaattgaagaatgaaagaacataagaaaataaaatcatgaattttaagctt 27812676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 179
Target Start/End: Original strand, 44920006 - 44920099
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||| |||||||||   ||||||||||||||| | |||||||||||||||||  |||  ||||||||||||||||||||||||||||||    
T  44920006 caagcttcaaatctaatattct---tatgcaaacatagacaaggatcatagatttgaagaccgaaggaccataagaaaataaaatcatgaattttaa 44920099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 44976959 - 44976862
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||| ||   ||||||||||||| ||||||| ||||||||| | ||| | |||||||||||||||||||||||||||||||    
T  44976959 caagcttcaaatctaatattcttatt---caaacatagacgaggatcataaatttgaagactaaaagatcataagaaaataaaatcatgaattttaagct 44976863  T

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Target: chr3; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 41944002 - 41944081
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||| | || |||| ||||||||| ||||| ||||||||||||||||||||| ||||||||||||    
T  41944002 ttcttatgcaaacatagacaaggaacataaatttgaagactgaaagaccataagaaaataaaatcattaattttaagctt 41944081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 13997123 - 13997034
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaatt 175  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||| ||||||||||||| ||||  || |||||||||||||||||||||||    
T  13997123 caagcttcaaatctaatattctt---atgcaaacatagacgaggattatagatttgaagactgaagcacaataagaaaataaaatcatgaatt 13997034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 25061506 - 25061410
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   ||||||||||||| || ||||||||||||||||| ||||  |||||||||||| ||||| ||||||||||||||    
T  25061506 caagcttcaaatctaatattctt---atgcaaacatagaggaggatcatagatttgaagactgaagaaccataagaaaa-aaaattatgaattttaagct 25061411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 50711056 - 50710990
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcat 170  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||| | |||||||||||||||||||    
T  50711056 ttcttatgcaaacatagacgatgatcatagatttgaagactgaaagagcataagaaaataaaatcat 50710990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 177
Target Start/End: Original strand, 14626262 - 14626335
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaatttt 177  Q
    |||||||||||  |||||  ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  14626262 ttcttatgcaagtatagataaagatcatagatttgaagactgaaagaccataagaaaataaaatcatgaatttt 14626335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 183
Target Start/End: Complemental strand, 53712433 - 53712360
Alignment:
Q  110 tgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||||||| ||||||||| | ||| | |||||||||||||||| |||||||||||||||    
T  53712433 tgcaaacatagacgaagatcataaatttgaagactaaaagatcataagaaaataaaataatgaattttaagctt 53712360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 179
Target Start/End: Complemental strand, 14463329 - 14463235
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagattt-gaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||| ||||||||||||||||||   ||||||||||||| |  |||||||||||| |||||||||||  ||||||||||||||||| |||||||||||    
T  14463329 caagtttcaaatataatattctt---atgcaaacatagatgcggatcatagattttgaagattgaaaggccataagaaaataaaataatgaattttaa 14463235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 2773344 - 2773278
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcat 170  Q
    |||||||||||||||||||||  |||||| ||||||||| ||||| |||||||||||||||||||||    
T  2773344 ttcttatgcaaacatagacgagaatcataaatttgaagactgaaagaccataagaaaataaaatcat 2773278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 26845039 - 26845095
Alignment:
Q  127 atcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||    
T  26845039 atcatagatttgaagactaaaagaccataagaaaataaaatcatgaattttaagctt 26845095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 2397912 - 2397991
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||| ||| ||||| ||||| |||| ||||||||||||||||  ||||||||||||||| ||||||||| ||||||    
T  2397912 ttcttatgtaaatatagatgaagaccataaatttgaagattgaaatgtcataagaaaataaaaccatgaatttgaagctt 2397991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 50710829 - 50710891
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaa 166  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||| | |||||||||||||||    
T  50710829 ttcttatgcaaacatagacaaggatcatagatttgaagactgaaagagcataagaaaataaaa 50710891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 2579227 - 2579282
Alignment:
Q  128 tcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||| | ||| |||||||||| || ||||||||||||||||    
T  2579227 tcatagatttgaagattgagagaccttaagaaaatacaaacatgaattttaagctt 2579282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 44883242 - 44883289
Alignment:
Q  136 ttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||||||  |||||||||||||||| ||||||||| ||||||    
T  44883242 ttgaagattgaaaagccataagaaaataaaaacatgaatttgaagctt 44883289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 183
Target Start/End: Complemental strand, 32809296 - 32809263
Alignment:
Q  150 accataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||| ||||||||||||||||||||    
T  32809296 accataagaaaatcaaatcatgaattttaagctt 32809263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 2e-34; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 1270315 - 1270218
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1270315 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaagct 1270219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 11724725 - 11724822
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  11724725 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaagct 11724821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 85 - 183
Target Start/End: Complemental strand, 42030743 - 42030648
Alignment:
Q  85 agcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  42030743 agcttcaaatctaatattctt---atgcaaacatagacgaagatcatagatttgaagattgaaagaccataaaaaaataaaatcatgaattttaagctt 42030648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 1650709 - 1650612
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1650709 caagcttcaaatctaatattctt---atgcaaacatagacgcggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaagct 1650613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 9027133 - 9027230
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  9027133 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattctaagct 9027229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 10192291 - 10192194
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10192291 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcataaatttgaagattgaaagaccataagaaaataaaatcatgaattttaagct 10192195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 16350700 - 16350797
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  16350700 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaatattgaaataccataagaaaataaaatcataaattttaagct 16350796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 179
Target Start/End: Complemental strand, 17549275 - 17549182
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17549275 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaa 17549182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 23926597 - 23926500
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  23926597 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcatagatttgaagattgaaagaccataaaaaaataaaatcatgaattttaagct 23926501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 179
Target Start/End: Original strand, 26499519 - 26499612
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26499519 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaa 26499612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 44490510 - 44490413
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  44490510 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagct 44490414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 83 - 180
Target Start/End: Original strand, 30488188 - 30488282
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaag 180  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  30488188 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaagattgaaagaccatgagaaaataaaatcatgaattttaag 30488282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 31556935 - 31556856
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  31556935 ttcttatgcaaacatagacgaggatcatagatttgaagattgaaagaccataagtaaataaaatcatgaattttaagctt 31556856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 33274585 - 33274506
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  33274585 ttcttatgcaaacatagacgaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagctt 33274506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 179
Target Start/End: Complemental strand, 9912118 - 9912025
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||| ||||||||||   ||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9912118 caagcttcaaatctaatattctt---atgcaaacatagacgagaatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaa 9912025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 10714214 - 10714117
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||| | ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  10714214 caagcttcaaatttaatattctt---atgcaaacatagacaaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagct 10714118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 29175130 - 29175033
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||    
T  29175130 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcatagatttgaagattgaaagaccataaaaaaataatatcatgaattttaagct 29175034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 29421899 - 29421802
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||| ||   |||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  29421899 caagcttcaaatctaatattttt---atgcaaacatagacgaggatcatagatttgaagattgaaagaccataagagaataaaatcatgaattttaagct 29421803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 42950725 - 42950628
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   ||||||||||||| || ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  42950725 caagcttcaaatctaatattctt---atgcaaacatagaagaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagct 42950629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 341420 - 341517
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||| | ||| | |||||||||||||||||||||||||||||||    
T  341420 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaagactaaaagatcataagaaaataaaatcatgaattttaagct 341516  T

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Target: chr2; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 11122829 - 11122753
Alignment:
Q  107 ttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||    
T  11122829 ttatgcaaacatagacgaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttgagctt 11122753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 2450276 - 2450197
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||| | ||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||    
T  2450276 ttcttatgcaaacatagacaatgatcatagatttgaacactgaaagaccataagaaaataaaatcatgaattttaagctt 2450197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 180
Target Start/End: Original strand, 3888979 - 3889073
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaag 180  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||| |||||| |||| ||||| |||||||||||||||||||||||||    
T  3888979 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagattggaagatcgaaagaccatgagaaaataaaatcatgaattttaag 3889073  T

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Target: chr2; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 13421200 - 13421279
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||||||||| |||| ||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||    
T  13421200 ttcttatgcaaacataaacgaggatcatagatttgaagactgaaagatcataagaaaataaaatcatgaattttaagctt 13421279  T

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Target: chr2; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 11723814 - 11723911
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   |||||||| ||| |||| ||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  11723814 caagcttcaaatctaatattct---tatgcaaatatatacgaggatcatagatttgaagactgaagaaccataagaaaataaaatcatgaattttaagct 11723910  T

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Target: chr2; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 179
Target Start/End: Original strand, 22899127 - 22899220
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||| | ||||| ||||||||||||||||||||| ||||||||    
T  22899127 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaacactgaaagaccataagaaaataaaatcataaattttaa 22899220  T

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Target: chr2; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 28788975 - 28789072
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   || |||| |||||||| ||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||    
T  28788975 caagcttcaaatctaatattctt---atacaaatatagacgaggatcatagatttgaacactgaaagaccataagaaaataaaatcatgaattttaagct 28789071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 35412083 - 35411986
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||| |   ||| |||||||||||||||||||||||||||||||||    
T  35412083 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcatagatttgaaaaccaaaagaccataagaaaataaaatcatgaattttaagct 35411987  T

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Target: chr2; HSP #29
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 40657506 - 40657409
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||||||||||||||   | |||||||||||  | ||||||||||||||||| || || |||||||||||||||||||||||||||||||||    
T  40657506 caagcttcaaatataatattctt---aagcaaacatagataaggatcatagatttgaagactggaagaccataagaaaataaaatcatgaattttaagct 40657410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 15461440 - 15461364
Alignment:
Q  107 ttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||||    
T  15461440 ttatgcaaacatagacgaggatcatagatttgaagattaaaagaccataagaaaattaaattatgaattttaagctt 15461364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 1479215 - 1479137
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||| ||||||| |||| |||||||||||||||||||||    
T  1479215 ttcttatgcaaacatagacgaggatcatagatttgaagactgaaagaccataa-aaaaaaaaatcatgaattttaagctt 1479137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 83 - 180
Target Start/End: Complemental strand, 22196129 - 22196035
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaag 180  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||| | ||| | ||||||||| |||||||||||||||||||    
T  22196129 caagcttcaaatctaatattctt---atgcaaacatagacgatgatcatagatttgaagactaaaagatcataagaaagtaaaatcatgaattttaag 22196035  T

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Target: chr2; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 22486202 - 22486104
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatca-tagatttgaagattgaaataccataagaaaataaaatcatgaattttaagc 181  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||| | |||||||||||| | ||| || |||||||||||||||||||||||||||||    
T  22486202 caagcttcaaatctaatattctt---atgcaaacatagacgaggataaatagatttgaagactcaaagactataagaaaataaaatcatgaattttaagc 22486106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 18449482 - 18449558
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||||||||||||||   ||||||||||||||| | ||| ||||||||||||||||||||| ||||||||||||    
T  18449482 ttcttatgcaaacatagacga---tcatagatttgaagactcaaagaccataagaaaataaaatcataaattttaagctt 18449558  T

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Target: chr2; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 182
Target Start/End: Complemental strand, 3322199 - 3322106
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   ||||||||||||||||   ||||| ||||||||| | ||| | |||||||||||||||||||||||||||||||    
T  3322199 caagcttcaaatctaatattctt---atgcaaacatagacga---tcataaatttgaagactaaaagatcataagaaaataaaatcatgaattttaagct 3322106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 181
Target Start/End: Original strand, 19079385 - 19079462
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagc 181  Q
    ||||||| |||||||||| || ||||||||||||||||| | ||| | ||||||||||||||||||||||||| ||||    
T  19079385 ttcttatacaaacatagatgaggatcatagatttgaagacttaaagatcataagaaaataaaatcatgaatttcaagc 19079462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 84 - 165
Target Start/End: Original strand, 20663818 - 20663896
Alignment:
Q  84 aagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaa 165  Q
    ||||||||||| |||||||||   ||||||||||||||||| ||||||| |||| |||||||||| ||||||||||| ||||    
T  20663818 aagcttcaaatctaatattct---tatgcaaacatagacgaggatcataaatttaaagattgaaagaccataagaaattaaa 20663896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 182
Target Start/End: Complemental strand, 37528242 - 37528166
Alignment:
Q  107 ttatgcaaacatagacgaa-gatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    ||||||||||||| | ||| | ||||| ||||||||||||| || ||||||||||| |||| |||| ||||||||||    
T  37528242 ttatgcaaacatatatgaaaggtcatatatttgaagattgagatgccataagaaaagaaaaccatggattttaagct 37528166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 14951852 - 14951901
Alignment:
Q  134 atttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||| |  |||||||||||||||  ||||||||||||||||    
T  14951852 atttgaagattgagaggccataagaaaataaatacatgaattttaagctt 14951901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 18508584 - 18508660
Alignment:
Q  107 ttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||| ||||  ||||||||| |||||  |||   |||||||||||||||  |||||||| ||||||    
T  18508584 ttatgcaaacatagatgaaggccatagatttaaagatgaaaaggtcataagaaaataaaacaatgaatttgaagctt 18508660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 4e-32; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 9546519 - 9546616
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   |||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9546519 caagcttcaaatctaatattct---tatgcaaacatagacgagaatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaagct 9546615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 13853250 - 13853347
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13853250 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatatatttgaagattgaaagaccataagaaaataaaatcatgaattttaagct 13853346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 17853751 - 17853848
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||| |   |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17853751 caagcttcaaatctaatattcat---atgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaagct 17853847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 22568969 - 22568872
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  22568969 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcatagatttgaagattgaaggaccataagaaaataaaatcatgaattttaagct 22568873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 104 - 179
Target Start/End: Original strand, 25121623 - 25121698
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25121623 ttcttatgcaaacatagacgatgatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaa 25121698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 685061 - 685158
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||||||||| || |||||||||| |||||||||||||||||||    
T  685061 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttgaagattgaaagactataagaaaatgaaatcatgaattttaagct 685157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 179
Target Start/End: Original strand, 3012021 - 3012114
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||| |||||||||   |||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  3012021 caagcttcaaatctaatattct---tatgcaaacatagatgaagatcatagatttgaaaattgaaaaaccataagaaaataaaatcatgaattttaa 3012114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 8129739 - 8129642
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   ||||||||||||||||  |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  8129739 caagcttcaaatctaatattctt---atgcaaacatagacgagaatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagct 8129643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 9220290 - 9220216
Alignment:
Q  105 tcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9220290 tcttatgcaaacatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaa 9220216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 28852373 - 28852297
Alignment:
Q  107 ttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  28852373 ttatgcaaacatagacgaggatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagctt 28852297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 104 - 179
Target Start/End: Complemental strand, 1925304 - 1925229
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1925304 ttcttatgcaaaaatagacgaggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaa 1925229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 104 - 179
Target Start/End: Complemental strand, 9899383 - 9899308
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  9899383 ttcttatgcaaacatagacgaggatcatagatttgaagattgaaagactataagaaaataaaatcatgaattttaa 9899308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 83 - 180
Target Start/End: Original strand, 24896280 - 24896374
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaag 180  Q
    |||||||||||| |||||||||   |||||||||||| || ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  24896280 caagcttcaaatttaatattct---tatgcaaacataaacaaagatcatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaag 24896374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 2316695 - 2316598
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   ||||||||||||| || ||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  2316695 caagcttcaaatctaatattctt---atgcaaacatagaagaggataatagatttgaagactgaaagaccataagaaaataaaatcatgaattttaagct 2316599  T

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Target: chr6; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 8487970 - 8488067
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||| ||||||||| ||||| || ||||||||||||||||||||||||||||||    
T  8487970 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatatatttgaagactgaaagacaataagaaaataaaatcatgaattttaagct 8488066  T

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Target: chr6; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 13178331 - 13178428
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||| | ||| | |||||||||||||||||||||||||||||||    
T  13178331 caagcttcaaatctaatattct---tatgcaaacatagacgatgatcatagatttgaagactaaaagatcataagaaaataaaatcatgaattttaagct 13178427  T

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Target: chr6; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 20027979 - 20027882
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||| | ||  |||||||||||||||||||||||||||||||||    
T  20027979 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcatagatttgaagactcaaggaccataagaaaataaaatcatgaattttaagct 20027883  T

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Target: chr6; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 179
Target Start/End: Original strand, 3105730 - 3105805
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  3105730 ttcttatgcaaacatagacgaggatcatagatttgaagactgaaggaccataagaaaataaaatcatgaattttaa 3105805  T

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Target: chr6; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 2882991 - 2883088
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   || |||||||| |||| ||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||    
T  2882991 caagcttcaaatctaatattctt---atccaaacataaacgaggatcatagatttgaagactgaaagaccataagaaaataaaatcattaattttaagct 2883087  T

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Target: chr6; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 84 - 180
Target Start/End: Original strand, 21926173 - 21926266
Alignment:
Q  84 aagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaag 180  Q
    ||||||||||| |||||||||   |||||||||||| | || ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21926173 aagcttcaaatctaatattct---tatgcaaacataaatgaggataatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaag 21926266  T

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Target: chr6; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 24325100 - 24325197
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| |||||||||   ||||||||||||||||| |||||||||||| ||||| |||| || ||||||||||||||||||||| ||||||||    
T  24325100 caagcttcaaatctaatattct---tatgcaaacatagacgaggatcatagatttaaagatagaaagactataagaaaataaaatcatgaactttaagct 24325196  T

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Target: chr6; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 2863688 - 2863785
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||| ||   || |||||||| |||| ||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||    
T  2863688 caagcttcaaatctaatattatt---atccaaacataaacgaggatcatagatttgaagactgaaagaccataagaaaattaaatcatgaattttaagct 2863784  T

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Target: chr6; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 11361955 - 11361898
Alignment:
Q  126 gatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11361955 gatcatagaattgaagattgaaagaccataagaaaataaaatcatgaattttaagctt 11361898  T

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Target: chr6; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 24335742 - 24335644
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    ||||||| ||||||||| || ||  ||| ||||||||||||| |||||||||||| |||| ||||  ||| |||||||||||||||||||||||||||||    
T  24335742 caagcttgaaatataattttttt--tatacaaacatagacgatgatcatagatttcaagactgaaggaccgtaagaaaataaaatcatgaattttaagct 24335645  T

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Target: chr6; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 12240669 - 12240589
Alignment:
Q  104 ttcttatgcaaacatagacgaagat-catagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    |||||||| |||||||||||| ||| |||||||||||||| ||||| || ||||||||| |||||||||||||||||||||    
T  12240669 ttcttatgtaaacatagacgaggattcatagatttgaagactgaaagacaataagaaaacaaaatcatgaattttaagctt 12240589  T

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Target: chr6; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 1136879 - 1136946
Alignment:
Q  113 aaacatagacgaagatcatagatttgaagattgaaat-accataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||| ||||||||||||||||| |||||  ||||||||||||||||||||||||||||||    
T  1136879 aaacatagacgaggatcatagatttgaagactgaaaagaccataagaaaataaaatcatgaattttaa 1136946  T

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Target: chr6; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 104 - 179
Target Start/End: Complemental strand, 14655264 - 14655189
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    ||||||||||||||||||| | ||  ||| ||||||||| ||||| ||||||||||||||||||||| ||||||||    
T  14655264 ttcttatgcaaacatagacaaggaatataaatttgaagactgaaagaccataagaaaataaaatcattaattttaa 14655189  T

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Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 4137349 - 4137420
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattt 176  Q
    ||||| |||||||||||| ||| |  ||| ||||||||||||||||  ||||||||||||||| |||||||||    
T  4137349 ttcttgtgcaaacatagatgaaaactata-atttgaagattgaaatgtcataagaaaataaaaccatgaattt 4137420  T

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Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 25026105 - 25026181
Alignment:
Q  108 tatgcaaacatagacgaagatcatagatttgaagattgaaataccat-aagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||| |||| || ||||||||||||| |  |||| || ||||| ||| ||||||||||||||||    
T  25026105 tatgcaaacatagacgaggatcctatatttgaagattgagaggccataaaaaaaattaaaacatgaattttaagctt 25026181  T

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Target: scaffold0200 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 84 - 183
Target Start/End: Original strand, 4471 - 4567
Alignment:
Q  84 aagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||| |||||||||   ||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4471 aagcttcaaatctaatattct---tatgcaaacatagacgaggatcataaatttgaagattgaaagaccataagaaaataaaatcatgaattttaagctt 4567  T

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Target: scaffold0009 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 258961 - 258864
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  258961 caagcttcaaatctaatattctt---atgcaaacatagacgaggatcatagatttgaagactgaagaaccataagaaaataaaatcatgaattttaagct 258865  T

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Target: scaffold0005 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 257880 - 257801
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||||||||||||||||||| |||||| |||||||||| ||||| |||||||||||||||||| |||||||||||||||    
T  257880 ttcttatgcaaacatagacgaggatcattgatttgaagactgaaagaccataagaaaataaaattatgaattttaagctt 257801  T

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Target: scaffold0592 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 179
Target Start/End: Complemental strand, 8594 - 8501
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||| ||||||||||   ||||||||||| ||   ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8594 caagcttcaaatctaatattctt---atgcaaacataaacagggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaa 8501  T

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Target: scaffold0024 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 108044 - 107972
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattt 176  Q
    |||||||||||||||||||||  |||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  108044 ttcttatgcaaacatagacgagaatcatagattcgaagattgaaaaaccataagaaaataaaatcatgaattt 107972  T

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Target: scaffold0077 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 104 - 179
Target Start/End: Original strand, 10045 - 10120
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    ||||||| ||||||||||| |  |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10045 ttcttatacaaacatagacaagtatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaa 10120  T

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Target: scaffold0029 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 73579 - 73482
Alignment:
Q  83 caagcttcaaatataatattcttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaagct 182  Q
    |||||||||||| ||||||| ||   ||||||||||||| || ||||||| ||||||||| ||||| || ||||||||||||||||||||||||||||||    
T  73579 caagcttcaaatctaatattatt---atgcaaacatagaagaggatcatatatttgaagactgaaagactataagaaaataaaatcatgaattttaagct 73483  T

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Target: scaffold0019 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 179
Target Start/End: Complemental strand, 45057 - 44983
Alignment:
Q  104 ttcttatgcaaacatagacgaagatcatagatttgaagattgaaataccataagaaaataaaatcatgaattttaa 179  Q
    |||||||||||| |||||||| |||| |||||||||||||||||| |||||||||||| ||||| |||||||||||    
T  45057 ttcttatgcaaa-atagacgaggatcgtagatttgaagattgaaagaccataagaaaaaaaaattatgaattttaa 44983  T

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Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 323575 - 323536
Alignment:
Q  144 tgaaataccataagaaaataaaatcatgaattttaagctt 183  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  323575 tgaaagaccataagaaaataaaatcatgaattttaagctt 323536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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