View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18385_low_1 (Length: 581)

Name: NF18385_low_1
Description: NF18385
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18385_low_1
NF18385_low_1
[»] chr3 (48 HSPs)
chr3 (269-568)||(32450628-32450928)
chr3 (47-262)||(32431620-32431835)
chr3 (406-568)||(32424719-32424881)
chr3 (1-51)||(36417715-36417765)
chr3 (1-51)||(23458006-23458056)
chr3 (1-51)||(36418039-36418089)
chr3 (1-51)||(40758461-40758511)
chr3 (4-51)||(2796206-2796253)
chr3 (4-51)||(35712071-35712118)
chr3 (1-51)||(3849058-3849108)
chr3 (1-51)||(3850478-3850528)
chr3 (1-51)||(9367768-9367818)
chr3 (1-51)||(19740950-19741000)
chr3 (1-51)||(42855656-42855706)
chr3 (10-51)||(23276343-23276384)
chr3 (3-51)||(1079574-1079622)
chr3 (3-46)||(41988616-41988659)
chr3 (8-51)||(51993991-51994034)
chr3 (1-40)||(53757074-53757113)
chr3 (4-51)||(55052319-55052366)
chr3 (1-51)||(25108446-25108496)
chr3 (9-51)||(33154904-33154946)
chr3 (3-44)||(43607814-43607855)
chr3 (11-51)||(1078564-1078604)
chr3 (3-51)||(9368654-9368702)
chr3 (11-51)||(19741253-19741293)
chr3 (3-51)||(25107240-25107288)
chr3 (3-51)||(41558235-41558283)
chr3 (4-51)||(9294312-9294359)
chr3 (18-49)||(14634120-14634151)
chr3 (4-51)||(23458333-23458380)
chr3 (4-51)||(35643878-35643925)
chr3 (4-51)||(40788772-40788819)
chr3 (2-49)||(53856409-53856456)
chr3 (1-35)||(21783441-21783475)
chr3 (9-51)||(29685968-29686010)
chr3 (9-51)||(32431551-32431593)
chr3 (1-51)||(33689409-33689458)
chr3 (9-51)||(40758174-40758216)
chr3 (5-51)||(41558035-41558081)
chr3 (1-51)||(46475132-46475181)
chr3 (3-51)||(4323555-4323603)
chr3 (3-51)||(21186048-21186096)
chr3 (3-51)||(26463659-26463707)
chr3 (4-40)||(40033557-40033593)
chr3 (3-51)||(42343084-42343132)
chr3 (11-51)||(46474842-46474882)
chr3 (4-44)||(52032491-52032531)
[»] chr8 (40 HSPs)
chr8 (1-51)||(20385595-20385645)
chr8 (1-51)||(20386781-20386831)
chr8 (1-51)||(1425080-1425130)
chr8 (1-51)||(36186128-36186178)
chr8 (1-51)||(38862914-38862964)
chr8 (1-51)||(38956023-38956073)
chr8 (1-51)||(8316680-8316730)
chr8 (1-51)||(12198977-12199027)
chr8 (1-51)||(12443405-12443455)
chr8 (1-51)||(13186410-13186460)
chr8 (1-51)||(23663572-23663622)
chr8 (1-51)||(34177321-34177371)
chr8 (1-51)||(40317991-40318041)
chr8 (2-51)||(33357525-33357574)
chr8 (3-51)||(2535903-2535951)
chr8 (1-40)||(7295278-7295317)
chr8 (4-51)||(23698598-23698645)
chr8 (4-51)||(31608867-31608914)
chr8 (1-51)||(12272945-12272995)
chr8 (1-43)||(22915424-22915466)
chr8 (1-47)||(35756933-35756979)
chr8 (9-51)||(39071703-39071745)
chr8 (1-46)||(39071993-39072037)
chr8 (4-51)||(7983455-7983502)
chr8 (4-51)||(8316942-8316989)
chr8 (4-51)||(10445687-10445734)
chr8 (4-51)||(12199260-12199307)
chr8 (4-51)||(12443688-12443735)
chr8 (4-51)||(15229958-15230005)
chr8 (4-51)||(23663868-23663915)
chr8 (1-52)||(30712068-30712118)
chr8 (1-52)||(30719845-30719895)
chr8 (1-51)||(2534722-2534772)
chr8 (9-51)||(4995016-4995057)
chr8 (1-51)||(34685609-34685658)
chr8 (10-51)||(12273213-12273254)
chr8 (3-40)||(34060527-34060564)
chr8 (3-40)||(34061681-34061718)
chr8 (11-51)||(15230290-15230330)
chr8 (11-51)||(16388610-16388650)
[»] chr7 (53 HSPs)
chr7 (1-51)||(27992059-27992109)
chr7 (1-51)||(48788830-48788880)
chr7 (1-51)||(13386098-13386148)
chr7 (1-51)||(17885655-17885705)
chr7 (1-51)||(24389136-24389186)
chr7 (1-51)||(32298804-32298854)
chr7 (1-51)||(43123202-43123252)
chr7 (2-51)||(6253792-6253841)
chr7 (3-51)||(2640205-2640253)
chr7 (3-51)||(18087691-18087739)
chr7 (4-51)||(22871631-22871678)
chr7 (5-51)||(5455854-5455900)
chr7 (1-51)||(10936145-10936195)
chr7 (1-51)||(17102340-17102390)
chr7 (1-51)||(27396656-27396706)
chr7 (1-51)||(42019624-42019674)
chr7 (1-46)||(43124503-43124548)
chr7 (3-51)||(5457260-5457308)
chr7 (1-36)||(3914489-3914524)
chr7 (4-51)||(6253498-6253545)
chr7 (4-51)||(10935821-10935868)
chr7 (4-51)||(17102047-17102094)
chr7 (4-51)||(18670217-18670264)
chr7 (4-51)||(40379796-40379843)
chr7 (4-51)||(45010958-45011005)
chr7 (1-51)||(17886841-17886891)
chr7 (9-51)||(20426689-20426731)
chr7 (9-51)||(27396954-27396996)
chr7 (1-51)||(28469037-28469087)
chr7 (1-51)||(40380035-40380085)
chr7 (3-40)||(33808361-33808398)
chr7 (11-51)||(18856015-18856055)
chr7 (3-51)||(32687424-32687472)
chr7 (3-51)||(42362477-42362525)
chr7 (4-51)||(16803999-16804046)
chr7 (4-51)||(28469362-28469409)
chr7 (4-51)||(32299059-32299106)
chr7 (4-51)||(37657191-37657238)
chr7 (4-51)||(42731446-42731493)
chr7 (4-51)||(42731773-42731820)
chr7 (1-40)||(47945395-47945434)
chr7 (1-40)||(47950825-47950864)
chr7 (9-51)||(6571040-6571082)
chr7 (11-49)||(7354891-7354929)
chr7 (1-51)||(19204809-19204859)
chr7 (19-49)||(23608837-23608867)
chr7 (9-51)||(32688577-32688619)
chr7 (9-51)||(32934705-32934747)
chr7 (2-51)||(28105528-28105577)
chr7 (104-136)||(12877484-12877516)
chr7 (3-51)||(18086316-18086364)
chr7 (11-51)||(22828179-22828219)
chr7 (11-51)||(24388846-24388886)
[»] chr6 (30 HSPs)
chr6 (1-51)||(3059607-3059657)
chr6 (1-51)||(30337769-30337819)
chr6 (1-51)||(30726110-30726160)
chr6 (1-51)||(33647302-33647352)
chr6 (3-51)||(33517887-33517935)
chr6 (1-51)||(681079-681129)
chr6 (1-51)||(11393155-11393205)
chr6 (1-51)||(13379833-13379883)
chr6 (1-51)||(679893-679943)
chr6 (1-51)||(12080987-12081037)
chr6 (1-51)||(30804212-30804262)
chr6 (2-51)||(20651037-20651086)
chr6 (3-51)||(8090280-8090328)
chr6 (3-51)||(26463206-26463254)
chr6 (4-51)||(30337476-30337523)
chr6 (1-51)||(11434829-11434879)
chr6 (1-51)||(15116583-15116633)
chr6 (1-51)||(28498376-28498426)
chr6 (2-51)||(20651999-20652048)
chr6 (3-51)||(8089470-8089518)
chr6 (3-51)||(12408524-12408572)
chr6 (1-40)||(21627751-21627790)
chr6 (4-51)||(26464553-26464600)
chr6 (4-51)||(33517561-33517608)
chr6 (1-51)||(17734223-17734273)
chr6 (9-51)||(21628072-21628114)
chr6 (9-51)||(31407235-31407277)
chr6 (7-40)||(12407546-12407579)
chr6 (3-51)||(11436009-11436057)
chr6 (11-51)||(12080663-12080703)
[»] chr5 (57 HSPs)
chr5 (1-51)||(11762068-11762118)
chr5 (1-51)||(14194450-14194500)
chr5 (1-51)||(28770896-28770946)
chr5 (1-51)||(39453650-39453700)
chr5 (1-51)||(42265762-42265812)
chr5 (1-51)||(3528900-3528950)
chr5 (1-51)||(17202750-17202800)
chr5 (1-51)||(27587466-27587516)
chr5 (1-51)||(28269449-28269499)
chr5 (1-51)||(29646389-29646439)
chr5 (1-51)||(35512465-35512515)
chr5 (1-51)||(37991226-37991276)
chr5 (1-45)||(38475066-38475110)
chr5 (1-51)||(6301894-6301944)
chr5 (1-51)||(8322755-8322805)
chr5 (1-51)||(11741868-11741918)
chr5 (1-51)||(18247427-18247477)
chr5 (1-51)||(19892335-19892385)
chr5 (1-51)||(21257512-21257562)
chr5 (1-51)||(24547204-24547254)
chr5 (1-45)||(6301576-6301620)
chr5 (4-51)||(11761776-11761823)
chr5 (4-51)||(27587175-27587222)
chr5 (1-51)||(186770-186820)
chr5 (1-51)||(5024046-5024096)
chr5 (1-51)||(5994240-5994290)
chr5 (1-51)||(11740714-11740764)
chr5 (1-51)||(16156882-16156932)
chr5 (1-51)||(21265170-21265220)
chr5 (9-51)||(35920543-35920585)
chr5 (1-51)||(43159165-43159215)
chr5 (3-51)||(35920255-35920303)
chr5 (4-51)||(3529196-3529243)
chr5 (12-51)||(5993916-5993955)
chr5 (4-51)||(20814489-20814536)
chr5 (4-51)||(35512175-35512222)
chr5 (4-51)||(39453327-39453374)
chr5 (4-51)||(41930839-41930886)
chr5 (9-51)||(13962891-13962933)
chr5 (1-51)||(13963180-13963230)
chr5 (9-51)||(17202426-17202468)
chr5 (11-49)||(18670231-18670269)
chr5 (1-51)||(19517958-19518008)
chr5 (1-51)||(20814163-20814212)
chr5 (1-51)||(20840788-20840838)
chr5 (1-51)||(32242593-32242642)
chr5 (1-51)||(38442418-38442468)
chr5 (9-51)||(40150173-40150215)
chr5 (1-51)||(42067875-42067925)
chr5 (3-40)||(5835779-5835816)
chr5 (3-40)||(18670503-18670540)
chr5 (3-44)||(24141486-24141527)
chr5 (3-44)||(42063288-42063329)
chr5 (1-49)||(11047788-11047835)
chr5 (9-49)||(12904783-12904823)
chr5 (11-51)||(13362589-13362629)
chr5 (11-51)||(28771199-28771239)
[»] chr4 (57 HSPs)
chr4 (1-51)||(147346-147396)
chr4 (1-51)||(24349701-24349751)
chr4 (1-51)||(51692870-51692920)
chr4 (1-48)||(13058333-13058380)
chr4 (1-51)||(1179151-1179201)
chr4 (1-51)||(7452154-7452204)
chr4 (1-51)||(10781835-10781885)
chr4 (1-51)||(18831668-18831718)
chr4 (1-51)||(24350783-24350833)
chr4 (1-51)||(35028025-35028075)
chr4 (1-51)||(37248556-37248606)
chr4 (1-51)||(43155556-43155606)
chr4 (3-51)||(23613631-23613679)
chr4 (3-51)||(40387494-40387542)
chr4 (1-51)||(148106-148156)
chr4 (1-51)||(10780740-10780790)
chr4 (1-51)||(10974349-10974399)
chr4 (1-51)||(15507700-15507750)
chr4 (1-51)||(24411699-24411749)
chr4 (1-51)||(36008871-36008921)
chr4 (1-51)||(44967096-44967146)
chr4 (1-51)||(49879234-49879284)
chr4 (1-51)||(50418695-50418745)
chr4 (1-49)||(5369218-5369266)
chr4 (8-51)||(16006151-16006194)
chr4 (4-51)||(24711138-24711185)
chr4 (4-51)||(37248263-37248310)
chr4 (8-51)||(54086722-54086765)
chr4 (1-51)||(11108191-11108241)
chr4 (9-51)||(18831376-18831418)
chr4 (1-51)||(34765407-34765457)
chr4 (1-51)||(46661265-46661315)
chr4 (1-43)||(52909604-52909646)
chr4 (1-51)||(55867465-55867515)
chr4 (3-51)||(11448082-11448130)
chr4 (11-51)||(17356283-17356323)
chr4 (3-51)||(41583584-41583632)
chr4 (3-51)||(48528512-48528560)
chr4 (4-51)||(7451861-7451908)
chr4 (4-51)||(10408241-10408288)
chr4 (4-51)||(22567109-22567156)
chr4 (4-51)||(27934841-27934888)
chr4 (4-51)||(43155850-43155897)
chr4 (4-51)||(44967392-44967439)
chr4 (4-51)||(50418991-50419038)
chr4 (9-51)||(13058064-13058106)
chr4 (1-51)||(17355952-17356002)
chr4 (1-51)||(24711431-24711481)
chr4 (1-51)||(37976180-37976230)
chr4 (9-51)||(39667133-39667175)
chr4 (1-47)||(54713660-54713706)
chr4 (9-51)||(54858587-54858629)
chr4 (3-48)||(41582477-41582522)
chr4 (11-51)||(23613336-23613376)
chr4 (3-51)||(40388459-40388507)
chr4 (3-51)||(50750914-50750962)
chr4 (11-51)||(54087056-54087096)
[»] chr2 (41 HSPs)
chr2 (1-51)||(13692571-13692621)
chr2 (1-51)||(25230129-25230179)
chr2 (1-51)||(44045353-44045403)
chr2 (1-51)||(6588710-6588760)
chr2 (1-51)||(6658198-6658248)
chr2 (1-51)||(16099375-16099425)
chr2 (1-51)||(37895374-37895424)
chr2 (1-45)||(11163087-11163131)
chr2 (1-51)||(36382478-36382528)
chr2 (1-51)||(36480069-36480119)
chr2 (1-51)||(36755439-36755489)
chr2 (1-51)||(39423866-39423916)
chr2 (1-51)||(39498630-39498680)
chr2 (1-51)||(45556398-45556448)
chr2 (3-51)||(25231201-25231249)
chr2 (4-51)||(11163377-11163424)
chr2 (4-51)||(16099082-16099129)
chr2 (1-51)||(9076418-9076468)
chr2 (9-51)||(15848115-15848157)
chr2 (1-51)||(34448146-34448196)
chr2 (1-51)||(44044141-44044191)
chr2 (1-51)||(44713822-44713872)
chr2 (3-40)||(30729659-30729696)
chr2 (3-51)||(10713076-10713124)
chr2 (11-51)||(28228697-28228737)
chr2 (3-51)||(28230092-28230140)
chr2 (7-46)||(3229718-3229757)
chr2 (4-51)||(15604366-15604413)
chr2 (4-51)||(28226096-28226143)
chr2 (4-51)||(39498337-39498384)
chr2 (4-51)||(45556139-45556186)
chr2 (1-51)||(2318861-2318911)
chr2 (1-51)||(3556360-3556410)
chr2 (1-51)||(15848439-15848489)
chr2 (9-51)||(34447840-34447882)
chr2 (3-51)||(199048-199096)
chr2 (3-51)||(202709-202757)
chr2 (3-51)||(3555277-3555325)
chr2 (9-49)||(11721449-11721489)
chr2 (1-45)||(21370553-21370597)
chr2 (11-51)||(36479745-36479785)
[»] chr1 (58 HSPs)
chr1 (1-51)||(183248-183298)
chr1 (1-51)||(37578219-37578269)
chr1 (3-51)||(34849038-34849086)
chr1 (3-51)||(34850418-34850466)
chr1 (1-51)||(6367913-6367963)
chr1 (1-51)||(26024743-26024793)
chr1 (1-51)||(30711678-30711728)
chr1 (1-51)||(43759173-43759223)
chr1 (1-51)||(47999150-47999200)
chr1 (1-51)||(49723077-49723127)
chr1 (1-45)||(1103812-1103856)
chr1 (1-48)||(1841809-1841856)
chr1 (1-51)||(4960860-4960910)
chr1 (1-51)||(17661879-17661928)
chr1 (3-49)||(17691248-17691294)
chr1 (1-51)||(35473658-35473708)
chr1 (1-51)||(36694309-36694359)
chr1 (1-51)||(36710410-36710460)
chr1 (1-51)||(41099084-41099134)
chr1 (1-51)||(46899088-46899138)
chr1 (3-51)||(13914095-13914143)
chr1 (4-51)||(6367589-6367636)
chr1 (4-51)||(35152684-35152731)
chr1 (4-51)||(40772813-40772860)
chr1 (1-51)||(24009602-24009652)
chr1 (1-51)||(32917611-32917661)
chr1 (1-51)||(46899951-46900001)
chr1 (1-51)||(48691175-48691225)
chr1 (3-51)||(13300257-13300305)
chr1 (3-51)||(17692538-17692586)
chr1 (9-49)||(42267332-42267372)
chr1 (11-51)||(47999453-47999493)
chr1 (4-47)||(183545-183588)
chr1 (4-51)||(4960567-4960614)
chr1 (1-40)||(5735062-5735101)
chr1 (4-51)||(14879312-14879359)
chr1 (4-51)||(17188981-17189028)
chr1 (4-51)||(23209681-23209728)
chr1 (4-51)||(24905194-24905241)
chr1 (4-51)||(25647911-25647958)
chr1 (4-51)||(26024450-26024497)
chr1 (4-51)||(42533051-42533098)
chr1 (1-51)||(19322919-19322969)
chr1 (9-51)||(31197092-31197134)
chr1 (1-51)||(40210397-40210447)
chr1 (5-51)||(40435372-40435418)
chr1 (9-51)||(40772534-40772576)
chr1 (9-51)||(41098760-41098802)
chr1 (9-51)||(46163057-46163099)
chr1 (4-45)||(19017983-19018024)
chr1 (3-51)||(5734037-5734084)
chr1 (1-45)||(7821305-7821348)
chr1 (4-44)||(17189203-17189243)
chr1 (4-52)||(28011389-28011437)
chr1 (3-51)||(32132331-32132379)
chr1 (11-51)||(34464476-34464516)
chr1 (1-37)||(42248822-42248858)
chr1 (3-51)||(44522174-44522222)
[»] scaffold0707 (1 HSPs)
scaffold0707 (3-51)||(6432-6480)
[»] scaffold0031 (2 HSPs)
scaffold0031 (1-40)||(69316-69355)
scaffold0031 (4-51)||(68992-69039)
[»] scaffold0775 (2 HSPs)
scaffold0775 (1-51)||(4989-5039)
scaffold0775 (3-51)||(6331-6379)
[»] scaffold0020 (2 HSPs)
scaffold0020 (4-51)||(139699-139746)
scaffold0020 (1-51)||(139992-140042)
[»] scaffold0128 (1 HSPs)
scaffold0128 (3-51)||(19884-19932)
[»] scaffold0205 (1 HSPs)
scaffold0205 (4-51)||(21036-21083)
[»] scaffold0008 (1 HSPs)
scaffold0008 (3-50)||(239904-239951)
[»] scaffold0007 (2 HSPs)
scaffold0007 (1-51)||(2092-2142)
scaffold0007 (11-51)||(1796-1836)


Alignment Details
Target: chr3 (Bit Score: 275; Significance: 1e-153; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 269 - 568
Target Start/End: Original strand, 32450628 - 32450928
Alignment:
Q  269 taacgacaatcaaagtcgtggttagttttgttttatggataattaacgagtcgtaacaccttgttatatttattacctgtacacatatat--ttaaaatg 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||    
T  32450628 taacgacaatcaaagtcgtggttagttttgttttatggataattaacgagtcgtaacaccttgttatatttattacctgaacacatatatatttaaaatg 32450727  T
Q  367 tgttaaccatctactatattattttgatgtgaaatttataacataacttacatgaacaactgagtctcgagcagccagagcaagaatatcagcacaggac 466  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32450728 tgtta-ccatctactatattattttgatgtgaaatttataacataacttacatgaacaactgagtctcgagcagccagagcaagaatatcagcacaggac 32450826  T
Q  467 acaaccttggggcatgctttctccacactggctttgatgtcatcaatcacgttgaatcctctagctgaattattgttagccgctgctgttttctctccta 566  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  32450827 acaaccttggggcatgctttctccacactggctttgatgtcatcaatcacgttgaatcctctagctgaattattgttagctgctgctgttttctctccta 32450926  T
Q  567 tg 568  Q
    ||    
T  32450927 tg 32450928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 47 - 262
Target Start/End: Original strand, 32431620 - 32431835
Alignment:
Q  47 ctaatctaaatggttaatgcagttcacatatgtgcttcaatgcttttaatgagatgtttaatgaatataacaaggtgttgcaattcattattaacctctc 146  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||   ||||| |||||    
T  32431620 ctaatttaaatggttaatgcagttcacatatgtgcttcaatgcttttaataagatgtttaataaatataacaaggtgttgcaattc---attaatctctc 32431716  T
Q  147 attcaacacaattaaccacaac---tttcaagtgtatatttgaatacaagttgtacttaatgaataccactaagaacaatttccttaaacacctaaaaat 243  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||    
T  32431717 attcaacacaattaaccacaactaatttcaagtgtatatttgaatacaagttgtgcttaatgaataccactaagaacaatttctttaaacacctgaaaat 32431816  T
Q  244 tatgtttatttgaagactt 262  Q
    |||||||||||||| ||||    
T  32431817 tatgtttatttgaacactt 32431835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 406 - 568
Target Start/End: Original strand, 32424719 - 32424881
Alignment:
Q  406 aacataacttacatgaacaactgagtctcgagcagccagagcaagaatatcagcacaggacacaaccttggggcatgctttctccacactggctttgatg 505  Q
    ||||||||| ||||||||||| ||||| || |||||||| | |||||||||||||||||||||||||   ||||||||||| |||||| |||||||||||    
T  32424719 aacataactcacatgaacaacagagtcccgggcagccagggtaagaatatcagcacaggacacaacccctgggcatgctttttccacattggctttgatg 32424818  T
Q  506 tcatcaatcacgttgaatcctctagctgaattattgttagccgctgctgttttctctcctatg 568  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  32424819 tcatcaatcacgttgaatcctctagctgaattattgttagcagctgctgttttttctcctatg 32424881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 36417765 - 36417715
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  36417765 agtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaat 36417715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23458056 - 23458006
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  23458056 agtttgcaaggattagcgaatacagggaccaatttttaaacgacccttaat 23458006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 36418039 - 36418089
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  36418039 agtttgcaaggattagcgaatacaggaaccaatttttaaacgacccctaat 36418089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 40758461 - 40758511
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  40758461 agtttgcaaggattagcgaatacatagaccaatttttaaatgacccctaat 40758511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 2796253 - 2796206
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||    
T  2796253 ttgccaggattagcgattacagggaccaatttttaaatgacccctaat 2796206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 35712118 - 35712071
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||    
T  35712118 ttgcaaggattagcgaatacatggaccaatttttaaatgatccctaat 35712071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 3849108 - 3849058
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||| |||||||||||||||||||||||| ||| ||||||    
T  3849108 agtttgcaaggattaacgaatacagggaccaatttttaaacgactcctaat 3849058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 3850478 - 3850528
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||| ||||||||| |||||||||||||||||||||||| ||||||||||    
T  3850478 agtttccaaggattatcgaatacagggaccaatttttaaacgacccctaat 3850528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 9367818 - 9367768
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  9367818 agtttgcaaggattagcgaatacagagaccattttttaaacgacccctaat 9367768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 19741000 - 19740950
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||| |||||||||||||||||||| || |||||||    
T  19741000 agtttgcaaggattagcgattacagggaccaatttttaaacgatccctaat 19740950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 42855656 - 42855706
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||| |||| |||||||||||||| ||||||    
T  42855656 agtttgcaaggattagcgaatacatggactaatttttaaatgacgcctaat 42855706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 23276343 - 23276384
Alignment:
Q  10 ggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  23276343 ggattagcgattacagggaccaatttttaaatgacccctaat 23276384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 1079574 - 1079622
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||| ||||||| ||| |||||||||||||||||||||||||||||||    
T  1079574 tttgccaggattaacgattacagggaccaatttttaaatgacccctaat 1079622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 41988659 - 41988616
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgaccc 46  Q
    |||||||| ||||| |||||||||||||||||||||||||||||    
T  41988659 tttgcaagaattagtgaatacagggaccaatttttaaatgaccc 41988616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 51994034 - 51993991
Alignment:
Q  8 aaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||||||||||||||| |||| |||||    
T  51994034 aaggattagcgaatacagggaccaatttttaaacgacctctaat 51993991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 53757074 - 53757113
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaa 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  53757074 agtttgcaaggattagcgaatacatggaccaatttttaaa 53757113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 55052366 - 55052319
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||| |||||||||||| | ||||||||||    
T  55052366 ttgcaaggattagcgaatacagagaccaatttttagacgacccctaat 55052319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 25108446 - 25108496
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||| ||||||||| | |||||||||||| ||||||||||||||||||    
T  25108446 agtttgccaggattagcaattacagggaccaaattttaaatgacccctaat 25108496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 33154946 - 33154904
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||| ||| |||||||||||||||||||||||||||||||    
T  33154946 aggattaacgattacagggaccaatttttaaatgacccctaat 33154904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 43607855 - 43607814
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgac 44  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  43607855 tttgcaaggattaacgattacagggaccaatttttaaatgac 43607814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 1078604 - 1078564
Alignment:
Q  11 gattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  1078604 gattaacgattacagggaccaatttttaaatgacccctaat 1078564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 9368654 - 9368702
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||  || |||||||||||||||||||| ||||||||||    
T  9368654 tttgcaaggattaatgattacagggaccaatttttaaacgacccctaat 9368702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 19741253 - 19741293
Alignment:
Q  11 gattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  19741253 gattagcgattacagggaccaatttttaaacgacccctaat 19741293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 25107288 - 25107240
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||| ||||||||||| || || |||||||||||||||||||||||||    
T  25107288 tttgccaggattagcgattagagagaccaatttttaaatgacccctaat 25107240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 41558235 - 41558283
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||| |||  |||||||||| ||||||||||    
T  41558235 tttgcaaggattagcgaatacatggattaatttttaaacgacccctaat 41558283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 9294312 - 9294359
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| || ||||||||||||||||| ||||||||||    
T  9294312 ttgccaggattagcgattatagggaccaatttttaaacgacccctaat 9294359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 49
Target Start/End: Original strand, 14634120 - 14634151
Alignment:
Q  18 gaatacagggaccaatttttaaatgaccccta 49  Q
    ||||||||||||||||||||||||||||||||    
T  14634120 gaatacagggaccaatttttaaatgaccccta 14634151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 23458333 - 23458380
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||| ||||| |||||||||||||| ||||| ||||    
T  23458333 ttgcaaggattagcgattacagagaccaatttttaaacgacccataat 23458380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 35643925 - 35643878
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| ||||||||| |||||||||||||| ||||||    
T  35643925 ttgccaggattagcgattacagggactaatttttaaatgacgcctaat 35643878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 40788772 - 40788819
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| ||||||||| |||||||||||||| ||||||    
T  40788772 ttgccaggattagcgattacagggactaatttttaaatgacgcctaat 40788819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 53856409 - 53856456
Alignment:
Q  2 gtttgcaaggattagcgaatacagggaccaatttttaaatgaccccta 49  Q
    ||||||||||||||| ||||||| ||||||||||||||  ||||||||    
T  53856409 gtttgcaaggattagtgaatacaaggaccaatttttaagcgaccccta 53856456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 21783475 - 21783441
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaattt 35  Q
    |||||||||||||||||||||||||| ||||||||    
T  21783475 agtttgcaaggattagcgaatacaggaaccaattt 21783441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 29686010 - 29685968
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||| ||||||||| |||||||||||||| ||||||    
T  29686010 aggattagcgattacagggactaatttttaaatgacgcctaat 29685968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 32431551 - 32431593
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||| ||| | |||||||||||||||||||||||||||||    
T  32431551 aggattaacgattgcagggaccaatttttaaatgacccctaat 32431593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 33689458 - 33689409
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||| ||||||||||||| | ||||||||||||| ||||||||||    
T  33689458 agtttgcaagaattagcgaatacatg-accaatttttaaacgacccctaat 33689409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 40758216 - 40758174
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||| |||| ||||||||||||||| ||||||||||    
T  40758216 aggattagcgattacatggaccaatttttaaacgacccctaat 40758174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 41558081 - 41558035
Alignment:
Q  5 tgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||| | ||||||||||||| ||||| ||||    
T  41558081 tgcaaggattagcgaatacaagtaccaatttttaaacgacccataat 41558035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 46475132 - 46475181
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||| | | ||||||||||| ||||||||||    
T  46475132 agtttgcaaggattagcgaataca-gtatcaatttttaaacgacccctaat 46475181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 4323555 - 4323603
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||| ||||||||||| ||||||||| |||||||||| ||| ||||||    
T  4323555 tttgccaggattagcgattacagggacgaatttttaaacgacgcctaat 4323603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 21186048 - 21186096
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||| ||||||| ||| |||| | ||||||||||||||||||||||||    
T  21186048 tttgccaggattaacgattacatgtaccaatttttaaatgacccctaat 21186096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 26463707 - 26463659
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||| |||||||| ||| ||||||||||| ||||| ||||    
T  26463707 tttgcaaggattaccgaatacaaggatcaatttttaaacgacccttaat 26463659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 40033593 - 40033557
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaa 40  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  40033593 ttgcaaggattagcgaatacatggatcaatttttaaa 40033557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 42343084 - 42343132
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||| |||||||||||||| ||| ||||||||||| ||||| ||||    
T  42343084 tttgcaaagattagcgaatacatggatcaatttttaaacgacccttaat 42343132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 46474882 - 46474842
Alignment:
Q  11 gattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||| ||||| |||||||||||||| ||||||||||    
T  46474882 gattagcgattacagagaccaatttttaaacgacccctaat 46474842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 52032491 - 52032531
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgac 44  Q
    |||| ||||||||||| ||||||||| ||||||||||||||    
T  52032491 ttgccaggattagcgattacagggactaatttttaaatgac 52032531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 20385645 - 20385595
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20385645 agtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaat 20385595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 20386781 - 20386831
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20386781 agtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaat 20386831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1425130 - 1425080
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  1425130 agtttgcaaggattagtgaatacagggaccaatttttaaacgacccctaat 1425080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 36186178 - 36186128
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  36186178 agtttgcaaggattagcgaatacagggaccaaattttaaaagacccctaat 36186128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 38862914 - 38862964
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  38862914 agtttgcaaggattagcgaatacagagaccaatttttaaacgacccctaat 38862964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 38956023 - 38956073
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  38956023 agtttacaaggattagcgaatacagggaccaatttttaaacgacccctaat 38956073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 8316730 - 8316680
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||| |||||||| ||||||||||||||| ||||||||||    
T  8316730 agtttgcaaggattaacgaatacatggaccaatttttaaacgacccctaat 8316680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12199027 - 12198977
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||||||    
T  12199027 agtttgcaaggattagcgattatagggaccaatttttaaacgacccctaat 12198977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12443455 - 12443405
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||||||    
T  12443455 agtttgcaaggattagcgattatagggaccaatttttaaacgacccctaat 12443405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13186410 - 13186460
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||| | ||||||||||||| ||||||||||    
T  13186410 agtttgcaaggattagcgaatacatgaaccaatttttaaacgacccctaat 13186460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23663622 - 23663572
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||| ||||||||| |||||||||||||||||||||||| ||||||||||    
T  23663622 agtttccaaggattaacgaatacagggaccaatttttaaacgacccctaat 23663572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 34177321 - 34177371
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||||||||||    
T  34177321 agtttacaaggattagcgaatacaaggaccaatttttaaacgacccctaat 34177371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 40318041 - 40317991
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||||||| ||| |||||||||| ||||||||||    
T  40318041 agtttgcaaggattagcgaatacagagacaaatttttaaacgacccctaat 40317991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 33357574 - 33357525
Alignment:
Q  2 gtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||||| ||| ||||||||||| ||||||||||    
T  33357574 gtttgcaaggattagcgaatacatggatcaatttttaaacgacccctaat 33357525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 2535903 - 2535951
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||| ||||||| ||| |||||||||||||||||||||||||||||||    
T  2535903 tttgccaggattaacgattacagggaccaatttttaaatgacccctaat 2535951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 7295278 - 7295317
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaa 40  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  7295278 agtttgcaaggattagcgaatacagggaccgatttttaaa 7295317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 23698598 - 23698645
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  23698598 ttgccaggattagcgattacagggaccaatttttaaacgacccctaat 23698645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 31608867 - 31608914
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||| ||||||||||||||| ||||| ||||    
T  31608867 ttgcaaggattagcgaatacatggaccaatttttaaacgacccttaat 31608914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12272995 - 12272945
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||| ||||| |||||||||||||| || |||||||    
T  12272995 agtttgcaaggattagcgattacagagaccaatttttaaacgatccctaat 12272945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22915466 - 22915424
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatga 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  22915466 agtttgcaaggattagcgattacatggaccaatttttaaatga 22915424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 35756933 - 35756979
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccc 47  Q
    ||||||||||||||| ||||||||| |||||||||||||| ||||||    
T  35756933 agtttgcaaggattaacgaatacagagaccaatttttaaacgacccc 35756979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 39071745 - 39071703
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||| |||||||||||||||||||| ||||||||||    
T  39071745 aggattagcgattacagggaccaatttttaaacgacccctaat 39071703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 39071993 - 39072037
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgaccc 46  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||    
T  39071993 agtttgcaaggatta-cgaatacagggaccaatttttaaacgaccc 39072037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 7983502 - 7983455
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| ||||||||| |||||||||||||| ||||||    
T  7983502 ttgccaggattagcgattacagggactaatttttaaatgacgcctaat 7983455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 8316942 - 8316989
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| |||| ||||||||||||||| ||||||||||    
T  8316942 ttgccaggattagcgattacaaggaccaatttttaaacgacccctaat 8316989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 10445687 - 10445734
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| ||||||||| |||||||||||||| ||||||    
T  10445687 ttgccaggattagcgattacagggactaatttttaaatgacacctaat 10445734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 12199260 - 12199307
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||| |||| ||||||||||||||| ||| ||||||    
T  12199260 ttgcaaggattagcgattacaaggaccaatttttaaacgactcctaat 12199307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 12443688 - 12443735
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||| |||| ||||||||||||||| ||| ||||||    
T  12443688 ttgcaaggattagcgattacaaggaccaatttttaaacgactcctaat 12443735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 15230005 - 15229958
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| ||||||||| |||||||||||||| ||||||    
T  15230005 ttgccaggattagcgattacagggactaatttttaaatgacgcctaat 15229958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 23663868 - 23663915
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| ||||| |||||||||||||| ||||||||||    
T  23663868 ttgccaggattagcgattacagagaccaatttttaaacgacccctaat 23663915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 30712068 - 30712118
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaatc 52  Q
    ||||||||||||||||| |||||| ||||||||||||||| | |||||||||    
T  30712068 agtttgcaaggattagcaaataca-ggaccaatttttaaacggcccctaatc 30712118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 30719845 - 30719895
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaatc 52  Q
    ||||||||||||||||| |||||| ||||||||||||||| | |||||||||    
T  30719845 agtttgcaaggattagcaaataca-ggaccaatttttaaacggcccctaatc 30719895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 2534772 - 2534722
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||| |||| | ||||||||||||| ||||| ||||    
T  2534772 agtttgcaaggattagcgattacatgtaccaatttttaaacgacccataat 2534722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 4995016 - 4995057
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||| |||||| ||||||||||||||||||||||||    
T  4995016 aggattagcgattacagg-accaatttttaaatgacccctaat 4995057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 34685609 - 34685658
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||||||  |||||||||||||| || |||||||    
T  34685609 agtttgcaaggattagcgaataca-agaccaatttttaaacgatccctaat 34685658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 12273213 - 12273254
Alignment:
Q  10 ggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||| ||| |||||||||||||||||||| ||||||||||    
T  12273213 ggattaacgattacagggaccaatttttaaacgacccctaat 12273254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 34060564 - 34060527
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaa 40  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  34060564 tttgcaaggattagcgattacatggaccaatttttaaa 34060527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 34061681 - 34061718
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaa 40  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  34061681 tttgcaaggattagcgaatacatggatcaatttttaaa 34061718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 15230290 - 15230330
Alignment:
Q  11 gattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||| ||||||||| |||||||||||||| ||||||    
T  15230290 gattagcgattacagggactaatttttaaatgacacctaat 15230330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 16388650 - 16388610
Alignment:
Q  11 gattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||| ||| ||||||||||||| ||||||||||    
T  16388650 gattagcgaatataggaaccaatttttaaacgacccctaat 16388610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 27992059 - 27992109
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27992059 agtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaat 27992109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 48788880 - 48788830
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  48788880 agtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaat 48788830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13386098 - 13386148
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  13386098 agtttgcaaggattagcgaatatagggaccaatttttaaacgacccctaat 13386148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17885705 - 17885655
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  17885705 agtttgcaaggattagagaatacagggaccaatttttaaacgacccctaat 17885655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 24389136 - 24389186
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  24389136 agtttgcaaggattagcgaatacatggaccaatttttaaacgacccctaat 24389186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 32298854 - 32298804
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  32298854 agtttgcaaggattagcgaatacagggaccagtttttaaacgacccctaat 32298804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 43123252 - 43123202
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  43123252 agtttgcaaggattagtgaatacagggaccaatttttaaacgacccctaat 43123202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 6253792 - 6253841
Alignment:
Q  2 gtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  6253792 gtttgcaaggattagcgaatacaaggaccaatttttaaacgacccctaat 6253841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 2640253 - 2640205
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  2640253 tttgcaaggattagcgaatacaggtaccaatttttaaacgacccctaat 2640205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 18087691 - 18087739
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  18087691 tttgcaaggattagcgattacagtgaccaatttttaaatgacccctaat 18087739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 22871631 - 22871678
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||    
T  22871631 ttgcaaggattagctattacagggaccaatttttaaatgacccctaat 22871678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 5455900 - 5455854
Alignment:
Q  5 tgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||    
T  5455900 tgcaaggattagagaatacagggaccaatttttaaacgacccctaat 5455854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 10936145 - 10936195
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||| |||||||||||||||  |||||||||    
T  10936145 agtttgcaaggattagcgaatacaaggaccaatttttaaacaacccctaat 10936195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 17102340 - 17102390
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||| |||||||||||||||| ||||||||||||||| ||||||||||    
T  17102340 agtttgctaggattagcgaatacatggaccaatttttaaacgacccctaat 17102390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 27396706 - 27396656
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||| ||||||||||||||| | ||||||||    
T  27396706 agtttgcaaggattagcgaatacatggaccaatttttaaacggcccctaat 27396656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 42019674 - 42019624
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||| ||||    
T  42019674 agtttgcaaggattagcgaatacatggaccaatttttaaacgacccttaat 42019624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 43124503 - 43124548
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgaccc 46  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||    
T  43124503 agtttgtaaggattagcgattacagggaccaatttttaaatgaccc 43124548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 5457260 - 5457308
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||| |||||||| ||||||||||||||| ||||||||||    
T  5457260 tttgcaaggattaacgaatacaaggaccaatttttaaacgacccctaat 5457308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 3914489 - 3914524
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttt 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  3914489 agtttgcaaggattagcgaatacagggaccaatttt 3914524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 6253545 - 6253498
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  6253545 ttgccaggattagcgattacagggaccaatttttaaacgacccctaat 6253498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 10935868 - 10935821
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  10935868 ttgccaggattagcgattacagggaccaatttttaaacgacccctaat 10935821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 17102094 - 17102047
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  17102094 ttgccaggattagcgattacagggaccaatttttaaacgacccctaat 17102047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 18670217 - 18670264
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||| ||||||||||||||| |||||||| ||||||||||    
T  18670217 ttgcaaggattaacgaatacagggaccattttttaaacgacccctaat 18670264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 40379843 - 40379796
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||||    
T  40379843 ttgcaaggattagcgaatacaaagaccaatttttaaacgacccctaat 40379796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 45010958 - 45011005
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||| | ||||||||||||| ||||||||||    
T  45010958 ttgcaaggattagcgaatacatgaaccaatttttaaacgacccctaat 45011005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 17886841 - 17886891
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||| |||||||| ||| |||||||||||||| |||||||    
T  17886841 agtttgcaaggattaacgaatacatggatcaatttttaaatgatccctaat 17886891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 20426689 - 20426731
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||| |||| |||||    
T  20426689 aggattagcgaatacagggaccaatttttaaacgacctctaat 20426731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 27396954 - 27396996
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||| |||||||||||||||||||| ||||||||||    
T  27396954 aggattagcgattacagggaccaatttttaaacgacccctaat 27396996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28469087 - 28469037
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||| |||||||||||| | ||||||||||||||| ||||||||||    
T  28469087 agtttgcaaagattagcgaatataaggaccaatttttaaacgacccctaat 28469037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 40380035 - 40380085
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||| ||||||||| ||||||||||||||| ||| ||||||    
T  40380035 agtttgcaaggattggcgaatacatggaccaatttttaaacgactcctaat 40380085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 33808398 - 33808361
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaa 40  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  33808398 tttgcaaggattagcgaatacagagaccaatttttaaa 33808361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 18856015 - 18856055
Alignment:
Q  11 gattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  18856015 gattaacgattacagggaccaatttttaaatgacccctaat 18856055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 32687472 - 32687424
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||| ||||||| ||| |||||||||||| ||||||||||||||||||    
T  32687472 tttgccaggattaacgattacagggaccaaattttaaatgacccctaat 32687424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 42362525 - 42362477
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||| |||||||| ||||||||||||||| ||| ||||||    
T  42362525 tttgcaaggattaacgaatacaaggaccaatttttaaacgacacctaat 42362477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 16803999 - 16804046
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| |||||| |||| |||||||||||||||||||| ||||||||||    
T  16803999 ttgctaggattggcgattacagggaccaatttttaaacgacccctaat 16804046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 28469362 - 28469409
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||| ||| |||||||||||||||||||| ||||||||||    
T  28469362 ttgccaggattaacgattacagggaccaatttttaaacgacccctaat 28469409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 32299059 - 32299106
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| |||||||||||||||||||| ||| ||||||    
T  32299059 ttgccaggattagcgattacagggaccaatttttaaacgactcctaat 32299106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 37657191 - 37657238
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||| |||||||||||| ||||||||||| || |||||||    
T  37657191 ttgcaaggattaacgaatacagggatcaatttttaaacgatccctaat 37657238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 42731493 - 42731446
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| |||| ||||||||||||||| ||||||||||    
T  42731493 ttgccaggattagcgattacaaggaccaatttttaaacgacccctaat 42731446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 42731773 - 42731820
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||| ||| ||||| ||||||||||| ||||||||||    
T  42731773 ttgcaaggattagcggatatagggatcaatttttaaacgacccctaat 42731820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 47945434 - 47945395
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaa 40  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  47945434 agtttgcaaggattagcgaatacatgaaccaatttttaaa 47945395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 47950864 - 47950825
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaa 40  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  47950864 agtttgcaaggattagcgaatacatgaaccaatttttaaa 47950825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 6571082 - 6571040
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||| ||| |||||||||||||||||||| ||||||||||    
T  6571082 aggattaacgattacagggaccaatttttaaacgacccctaat 6571040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 7354929 - 7354891
Alignment:
Q  11 gattagcgaatacagggaccaatttttaaatgaccccta 49  Q
    ||||| |||||| ||||||||||||||||||||||||||    
T  7354929 gattaacgaatatagggaccaatttttaaatgaccccta 7354891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 19204809 - 19204859
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||| |||| | |||||||||||||  |||||||||    
T  19204809 agtttgcaaggattagcgattacatgaaccaatttttaaaccacccctaat 19204859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 49
Target Start/End: Complemental strand, 23608867 - 23608837
Alignment:
Q  19 aatacagggaccaatttttaaatgaccccta 49  Q
    |||||||||||||||||||||||||||||||    
T  23608867 aatacagggaccaatttttaaatgaccccta 23608837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 32688577 - 32688619
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||| |||| ||||||| ||||||||||||||||||    
T  32688577 aggattagcgattacaaggaccaaattttaaatgacccctaat 32688619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 32934705 - 32934747
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||| ||||||||| |||||||||||||| ||||||    
T  32934705 aggattagcgattacagggactaatttttaaatgacgcctaat 32934747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 28105577 - 28105528
Alignment:
Q  2 gtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| |||||||||| |||||||||||| |||||||||| ||||| ||||    
T  28105577 gttttcaaggattagtgaatacagggacaaatttttaaacgacccttaat 28105528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 104 - 136
Target Start/End: Complemental strand, 12877516 - 12877484
Alignment:
Q  104 ttaatgaatataacaaggtgttgcaattcatta 136  Q
    |||||||||||||||||||||||||| ||||||    
T  12877516 ttaatgaatataacaaggtgttgcaactcatta 12877484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 18086364 - 18086316
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||| ||  |||||||||||||||||||| ||| ||||||    
T  18086364 tttgcaaggattatcgtttacagggaccaatttttaaacgactcctaat 18086316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 22828179 - 22828219
Alignment:
Q  11 gattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||| ||| |||| ||||||||||||||||||||||||||    
T  22828179 gattaacgattacaaggaccaatttttaaatgacccctaat 22828219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 24388886 - 24388846
Alignment:
Q  11 gattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||| |||||||||||||| ||||| ||||    
T  24388886 gattagcgaatacagagaccaatttttaaacgacccataat 24388846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 3059607 - 3059657
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3059607 agtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaat 3059657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30337769 - 30337819
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  30337769 agtttgcaaggattagcgattacagggaccaatttttaaatgacccctaat 30337819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30726110 - 30726160
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30726110 agtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaat 30726160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33647302 - 33647352
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33647302 agtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaat 33647352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 33517887 - 33517935
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33517887 tttgcaaggattagcgaatacagggaccaatttttaaacgacccctaat 33517935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 681079 - 681129
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  681079 agtttgcaaggattagcgaatacagagaccaatttttaaacgacccctaat 681129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 11393155 - 11393205
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  11393155 agtttgcaaggattagcgaatacggggaccaatttttaaacgacccctaat 11393205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13379833 - 13379883
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  13379833 agtttgcaagaattagcgaatacagggaccaatttttaaacgacccctaat 13379883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 679943 - 679893
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||| ||||    
T  679943 agtttgcaaggattagcgaatacagagaccaatttttaaacgacccttaat 679893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12080987 - 12081037
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||||||||||| |||||||||| ||| ||||||    
T  12080987 agtttgcaaggattagcgaatacagggacaaatttttaaacgactcctaat 12081037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30804212 - 30804262
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  30804212 agtttgcaagaattagcgaatacagggatcaatttttaaacgacccctaat 30804262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 20651086 - 20651037
Alignment:
Q  2 gtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||||||| ||||||||||||| || |||||||    
T  20651086 gtttgcaaggattagcgaatacaggaaccaatttttaaacgatccctaat 20651037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 8090280 - 8090328
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||||||||    
T  8090280 tttgcaaggattagtgaatacaaggaccaatttttaaacgacccctaat 8090328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 26463254 - 26463206
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||| ||||||| |||||||||||||||||||||||| ||||||||||    
T  26463254 tttgccaggattaacgaatacagggaccaatttttaaacgacccctaat 26463206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 30337523 - 30337476
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  30337523 ttgccaggattagcgattacagggaccaatttttaaacgacccctaat 30337476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 11434879 - 11434829
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  11434879 agtttgcaacgattagcgaatacatggaccaatttttaaacgacccttaat 11434829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 15116583 - 15116633
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||| |||  ||||||||||||||| ||||||||||    
T  15116583 agtttgcaaggattagcgattacgaggaccaatttttaaacgacccctaat 15116633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28498376 - 28498426
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||| ||||||||||| |||| |||||||||||||||||| |||||||    
T  28498376 agtttgccaggattagcgattacaaggaccaatttttaaatgagccctaat 28498426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 20651999 - 20652048
Alignment:
Q  2 gtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||| ||||||||||| ||||||||||| ||||| ||||    
T  20651999 gtttgcaaggattagtgaatacagggatcaatttttaaacgacccataat 20652048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 8089518 - 8089470
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||| ||| || ||||||||||||||||| ||||||||||    
T  8089518 tttgcaaggattaacgattatagggaccaatttttaaacgacccctaat 8089470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 12408524 - 12408572
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||| ||||||| |||||||  |||||||||    
T  12408524 tttgcaaggattagcgaatacaaggaccaacttttaaacaacccctaat 12408572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 21627790 - 21627751
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  21627790 agtttgcaaggattagcgaatacatggatcaatttttaaa 21627751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 26464553 - 26464600
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||| | ||||||||||||| |||||||||||||||||||    
T  26464553 ttgccaggattaacaaatacagggaccattttttaaatgacccctaat 26464600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 33517608 - 33517561
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| |||||||||||||||||||| || |||||||    
T  33517608 ttgccaggattagcgattacagggaccaatttttaaacgatccctaat 33517561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17734273 - 17734223
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||| | |||| | ||||||||||||| ||||||||||    
T  17734273 agtttgcaaggattagcaattacaagaaccaatttttaaacgacccctaat 17734223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 21628072 - 21628114
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||| |||||||||||||||||||  ||||||||||    
T  21628072 aggattagcgattacagggaccaatttttaagcgacccctaat 21628114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 31407235 - 31407277
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||| ||||||||| |||||||||||||| ||||||    
T  31407235 aggattagcgattacagggactaatttttaaatgacgcctaat 31407277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 12407579 - 12407546
Alignment:
Q  7 caaggattagcgaatacagggaccaatttttaaa 40  Q
    ||||||||||||||||||| ||||||||||||||    
T  12407579 caaggattagcgaatacagagaccaatttttaaa 12407546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 11436009 - 11436057
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||| ||||||||||||| | ||||||||||||| || |||||||    
T  11436009 tttgcaagaattagcgaatacatgaaccaatttttaaacgaaccctaat 11436057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 12080703 - 12080663
Alignment:
Q  11 gattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||| |||||||| ||||||||||| ||||||||||    
T  12080703 gattagcgattacagggagcaatttttaaacgacccctaat 12080663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 11762068 - 11762118
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11762068 agtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaat 11762118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 14194500 - 14194450
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14194500 agtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaat 14194450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28770946 - 28770896
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28770946 agtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaat 28770896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 39453650 - 39453700
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  39453650 agtttgcaaagattagcgaatacagggaccaatttttaaatgacccctaat 39453700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 42265812 - 42265762
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  42265812 agtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaat 42265762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 3528950 - 3528900
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  3528950 agtttgcaaggattagcaaatacagggaccaatttttaaacgacccctaat 3528900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 17202750 - 17202800
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  17202750 agtttgcaaggattagcgaatacagggaccgatttttaaacgacccctaat 17202800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 27587466 - 27587516
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  27587466 agtttgcaaggattagcgaatacaaggaccaatttttaaacgacccctaat 27587516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28269499 - 28269449
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  28269499 agtttgcaaggattagcgaatactgggaccaatttttaaacgacccctaat 28269449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 29646439 - 29646389
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  29646439 agtttgcaaggattagcgaatacatggaccaatttttaaaagacccctaat 29646389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 35512465 - 35512515
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  35512465 agtttgcaaggattggcgaatacagggaccaatttttaaacgacccctaat 35512515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 37991276 - 37991226
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  37991276 agtttgcaaggattaacgaatacagggaccaatttttaaacgacccctaat 37991226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 38475110 - 38475066
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacc 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  38475110 agtttgcaaggattagcgaatacatggaccaatttttaaatgacc 38475066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 6301894 - 6301944
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||| |||||||| ||||||||||||||| ||||||||||    
T  6301894 agtttgcaaggattaacgaatacaaggaccaatttttaaacgacccctaat 6301944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 8322755 - 8322805
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||| ||||||| |||||||||||||||| ||||||||||    
T  8322755 agtttgcaaggattaacgaatacggggaccaatttttaaacgacccctaat 8322805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 11741868 - 11741918
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||| ||||||||||||||| |||| ||||||||||||||||||||    
T  11741868 agtttgcaaagattagcgaatacagagaccgatttttaaatgacccctaat 11741918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 18247427 - 18247477
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||||||| |||||| ||||||| ||||||||||    
T  18247427 agtttgcaaggattagcgaatacagagaccaaattttaaacgacccctaat 18247477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 19892385 - 19892335
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||| |||||||| ||||||||||||||| ||||||||||    
T  19892385 agtttgcaaggattaacgaatacatggaccaatttttaaacgacccctaat 19892335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 21257512 - 21257562
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||||||| | |||||||||||| ||||||||||    
T  21257512 agtttgcaaggattagcgaatacagtgtccaatttttaaacgacccctaat 21257562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 24547254 - 24547204
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||| ||||||||||||||||| || ||||||||||    
T  24547254 agtttgcaaggattagcgattacagggaccaattttttaacgacccctaat 24547204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 6301620 - 6301576
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacc 45  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||    
T  6301620 agtttgcaaggattagcgaatacaaggaccaatttttaaacgacc 6301576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 11761823 - 11761776
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  11761823 ttgccaggattagcgattacagggaccaatttttaaacgacccctaat 11761776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 27587222 - 27587175
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  27587222 ttgccaggattagcgattacagggaccaatttttaaacgacccctaat 27587175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 186770 - 186820
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||| ||||||| |||||||||||||||||||||| |||| |||||    
T  186770 agtttgcaaagattagcaaatacagggaccaatttttaaacgacctctaat 186820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 5024096 - 5024046
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||| | | ||||||||||| ||||||||||    
T  5024096 agtttgcaaggattagcgaatacatgtatcaatttttaaacgacccctaat 5024046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 5994240 - 5994290
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||| | ||||||||||||| ||||| ||||    
T  5994240 agtttgcaaggattagcgaatacatgaaccaatttttaaacgacccttaat 5994290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 11740764 - 11740714
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||| | ||| ||||||||||| ||||||||||    
T  11740764 agtttgcaaggattagcgaatatatggatcaatttttaaacgacccctaat 11740714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 16156932 - 16156882
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||| ||||||||  |||||||||||||| ||||||||||    
T  16156932 agtttgcaaggattaacgaatacatagaccaatttttaaacgacccctaat 16156882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 21265220 - 21265170
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||| |||||| ||||||||||||||| |||| |||||    
T  21265220 agtttgcaaggattagcaaatacatggaccaatttttaaacgacctctaat 21265170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 35920543 - 35920585
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||| |||||||||||||||||||| ||||||||||    
T  35920543 aggattagcgattacagggaccaatttttaaacgacccctaat 35920585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 43159165 - 43159215
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||| |||||||||||||||||  |||||||||||||| ||||||||||    
T  43159165 agtttgtaaggattagcgaatacaacgaccaatttttaaacgacccctaat 43159215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 35920303 - 35920255
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||||  |||||||||||||| || |||||||    
T  35920303 tttgcaaggattagcgaatacattgaccaatttttaaacgatccctaat 35920255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 3529196 - 3529243
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||| ||| |||||||||||||||||||| ||||||||||    
T  3529196 ttgccaggattaacgattacagggaccaatttttaaacgacccctaat 3529243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 5993955 - 5993916
Alignment:
Q  12 attagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||| |||||||||||||||||||| ||||||||||    
T  5993955 attagcgattacagggaccaatttttaaacgacccctaat 5993916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 20814489 - 20814536
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| ||||| |||||||||||||| ||||||||||    
T  20814489 ttgctaggattagcgattacagtgaccaatttttaaacgacccctaat 20814536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 35512222 - 35512175
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| |||||||||||||||||||| ||||| ||||    
T  35512222 ttgccaggattagcgattacagggaccaatttttaaacgacccttaat 35512175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 39453374 - 39453327
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| ||||| |||||||||||||| ||||||||||    
T  39453374 ttgccaggattagcgattacagagaccaatttttaaacgacccctaat 39453327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 41930839 - 41930886
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||| | ||||||||| |||||||||||||| ||||||    
T  41930839 ttgcaaggattagcaattacagggacgaatttttaaatgacgcctaat 41930886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 13962933 - 13962891
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||| | |||||||||||||||||||| ||||||||||    
T  13962933 aggattagcaattacagggaccaatttttaaacgacccctaat 13962891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13963180 - 13963230
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||| ||||||||  |||||||||||||| ||||| ||||    
T  13963180 agtttgcaaggattaacgaatacatagaccaatttttaaacgacccataat 13963230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 17202468 - 17202426
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||| ||||| |||||||||||||| ||||||||||    
T  17202468 aggattagcgattacagtgaccaatttttaaacgacccctaat 17202426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 18670269 - 18670231
Alignment:
Q  11 gattagcgaatacagggaccaatttttaaatgaccccta 49  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  18670269 gattagcgattacagggaccaatttttaaacgaccccta 18670231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 19517958 - 19518008
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||| |||||||||||||| |||| ||||||||||  |||||||||    
T  19517958 agtttgcaaagattagcgaatacatggactaatttttaaactacccctaat 19518008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 20814212 - 20814163
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||||||  |||||||||||||| |||| |||||    
T  20814212 agtttgcaaggattagcgaataca-agaccaatttttaaacgacctctaat 20814163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 20840788 - 20840838
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||| ||||||||||| |||||  ||||||||||||| ||||||||||    
T  20840788 agtttgctaggattagcgattacagttaccaatttttaaacgacccctaat 20840838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 32242593 - 32242642
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||| |||| ||||||||||  |||||||||    
T  32242593 agtttgcaaggattagcgaataca-ggactaatttttaaacaacccctaat 32242642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 38442418 - 38442468
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||| |||||||| | ||| ||||||||| ||||||||||    
T  38442418 agtttgcaaggattaacgaatacaagaacccatttttaaacgacccctaat 38442468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 40150173 - 40150215
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||| ||| |||||||||||||||| ||||||||||||||    
T  40150173 aggattaacgattacagggaccaattttaaaatgacccctaat 40150215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 42067875 - 42067925
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||| ||||||| | | |||||||||||| ||||||||||||||||||    
T  42067875 agtttgccaggattatcaattacagggaccaaattttaaatgacccctaat 42067925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 5835779 - 5835816
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaa 40  Q
    |||||||||||||||||||||||  |||||||||||||    
T  5835779 tttgcaaggattagcgaatacagaaaccaatttttaaa 5835816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 18670503 - 18670540
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaa 40  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  18670503 tttgcaaggattggcgaatacagagaccaatttttaaa 18670540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 24141527 - 24141486
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgac 44  Q
    ||||| ||||||| ||| ||||||||||||||||||||||||    
T  24141527 tttgccaggattaacgattacagggaccaatttttaaatgac 24141486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 42063329 - 42063288
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgac 44  Q
    ||||| ||||||||||| ||||| ||||||||||||||||||    
T  42063329 tttgccaggattagcgattacagagaccaatttttaaatgac 42063288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 11047788 - 11047835
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgaccccta 49  Q
    |||||||||||||||| |||||||  |||||||||||||| ||||||||    
T  11047788 agtttgcaaggattagtgaataca-tgaccaatttttaaacgaccccta 11047835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 12904823 - 12904783
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgaccccta 49  Q
    ||||||| ||||||||||||||| ||||||||||| |||||    
T  12904823 aggattaacgaatacagggaccattttttaaatgatcccta 12904783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 13362589 - 13362629
Alignment:
Q  11 gattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||| |||| ||||||||||||||| ||||||||||    
T  13362589 gattagcgattacaaggaccaatttttaaacgacccctaat 13362629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 28771199 - 28771239
Alignment:
Q  11 gattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||| |||| ||||||||||||||| ||||||||||    
T  28771199 gattagcgattacatggaccaatttttaaacgacccctaat 28771239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 147396 - 147346
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  147396 agtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaat 147346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 24349751 - 24349701
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24349751 agtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaat 24349701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 51692870 - 51692920
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  51692870 agtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaat 51692920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 13058333 - 13058380
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccct 48  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  13058333 agtttgcaaggattagcgaatacagggaccaatttttaaacgacccct 13058380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 1179151 - 1179201
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  1179151 agtttgcaaggattagcgaatacatggaccaatttttaaacgacccctaat 1179201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 7452154 - 7452204
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  7452154 agtttgcaaggattagcgaatacagagaccaatttttaaacgacccctaat 7452204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 10781835 - 10781885
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  10781835 agtttgcaaggattagcgaatacatggaccaatttttaaacgacccctaat 10781885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 18831668 - 18831718
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  18831668 agtttgcaatgattagcgaatacagggaccaatttttaaacgacccctaat 18831718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 24350783 - 24350833
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  24350783 agtttgcaaggattagcgaatgcagggaccaatttttaaacgacccctaat 24350833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35028075 - 35028025
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  35028075 agtttgcaaggattagcgaatacaggaaccaatttttaaacgacccctaat 35028025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 37248556 - 37248606
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  37248556 agtttgcaaggattagcgattacagggaccaatttttaaacgacccctaat 37248606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 43155606 - 43155556
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  43155606 agtttgcaaggattagcgaatacagggaccaatttttaaacgacccttaat 43155556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 23613631 - 23613679
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  23613631 tttgcaaggattagcgaatacagggatcaatttttaaacgacccctaat 23613679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 40387542 - 40387494
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  40387542 tttgccaggattagcgaatacagggaccaatttttaaatggcccctaat 40387494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 148106 - 148156
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||| |||||| ||||||||||||||||| ||||||||||    
T  148106 agtttgcaaggattaacgaataaagggaccaatttttaaacgacccctaat 148156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 10780790 - 10780740
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||| || ||||||||||||||| ||||||||||    
T  10780790 agtttgcaaggattagcgaatgcatggaccaatttttaaacgacccctaat 10780740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 10974399 - 10974349
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||| || ||||||||||||||| ||||||||||    
T  10974399 agtttgcaaggattagcgaatgcatggaccaatttttaaacgacccctaat 10974349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 15507750 - 15507700
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||| ||||    
T  15507750 agtttgcaaggattagcgaatatagggaccaatttttaaacgacccttaat 15507700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 24411699 - 24411749
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||| ||||    
T  24411699 agtttgcaaggattagcgaatacagggatcaatttttaaacgacccttaat 24411749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 36008921 - 36008871
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||| |||||||||||||||||||||||||||||| || |||||||    
T  36008921 agtttgcaatgattagcgaatacagggaccaatttttaaacgatccctaat 36008871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 44967146 - 44967096
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||| |||||||||||||||||| |||||||||||||| ||||||||||    
T  44967146 agtttgtaaggattagcgaatacagagaccaatttttaaacgacccctaat 44967096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 49879284 - 49879234
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||| | |||||||||||||||||||| ||||||||||    
T  49879284 agtttgcaaggattagcaattacagggaccaatttttaaacgacccctaat 49879234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 50418745 - 50418695
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||| ||| |||||||||||||||||||| ||||||||||    
T  50418745 agtttgcaaggattaacgattacagggaccaatttttaaacgacccctaat 50418695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 5369218 - 5369266
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgaccccta 49  Q
    ||||||||||||||| ||||| |||||||||||||||||| ||||||||    
T  5369218 agtttgcaaggattaacgaatgcagggaccaatttttaaacgaccccta 5369266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 16006151 - 16006194
Alignment:
Q  8 aaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||| |||||||||||||| ||||||||||    
T  16006151 aaggattagcgaatacagagaccaatttttaaacgacccctaat 16006194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 24711185 - 24711138
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  24711185 ttgccaggattagcgattacagggaccaatttttaaacgacccctaat 24711138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 37248310 - 37248263
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  37248310 ttgccaggattagcgattacagggaccaatttttaaacgacccctaat 37248263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 54086765 - 54086722
Alignment:
Q  8 aaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||| |||||||||||||| ||||||||||    
T  54086765 aaggattagcgaatacagagaccaatttttaaacgacccctaat 54086722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 11108191 - 11108241
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||| ||| ||||||||||| || |||||||    
T  11108191 agtttgcaaggattagcgaatacaaggatcaatttttaaacgatccctaat 11108241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 18831418 - 18831376
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||| |||||||||||||||||||| ||||||||||    
T  18831418 aggattagcgattacagggaccaatttttaaacgacccctaat 18831376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 34765457 - 34765407
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||| ||||| ||||||||| ||||| ||||    
T  34765457 agtttgcaaggattagcgaatacaaggaccgatttttaaacgacccttaat 34765407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 46661265 - 46661315
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||| ||||||||  |||||||||||||||||||||| ||||||||||    
T  46661265 agtttgcgaggattagtaaatacagggaccaatttttaaacgacccctaat 46661315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 52909604 - 52909646
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatga 43  Q
    ||||||||||||||||||||||||  |||||||||||||||||    
T  52909604 agtttgcaaggattagcgaatacatagaccaatttttaaatga 52909646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 55867465 - 55867515
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||| ||| |||| ||||||||||||||| ||||||||||    
T  55867465 agtttgcaaggattaacgattacatggaccaatttttaaacgacccctaat 55867515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 11448082 - 11448130
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||| ||||| || ||||||||||| ||||||||||    
T  11448082 tttgcaaggattagcgattacagagatcaatttttaaacgacccctaat 11448130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 17356283 - 17356323
Alignment:
Q  11 gattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||| ||||| ||||    
T  17356283 gattagcgaatacagggaccaatttttaaacgacccgtaat 17356323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 41583584 - 41583632
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||| |||||||||||||||||  | ||||||||||||||||||||||    
T  41583584 tttgccaggattagcgaatacagaaatcaatttttaaatgacccctaat 41583632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 48528560 - 48528512
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||  ||||||||| |||||||||||||| ||||||||||    
T  48528560 tttgcaaggattgacgaatacagagaccaatttttaaacgacccctaat 48528512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 7451908 - 7451861
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||| ||| |||||||||||||||||||| ||||||||||    
T  7451908 ttgccaggattaacgattacagggaccaatttttaaacgacccctaat 7451861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 10408241 - 10408288
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| ||||||||| |||||||||||||| ||||||    
T  10408241 ttgccaggattagcgattacagggactaatttttaaatgacgcctaat 10408288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 22567109 - 22567156
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||| | ||||||||| |||||||||||||| ||||||    
T  22567109 ttgcaaggattagcaattacagggacgaatttttaaatgacgcctaat 22567156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 27934841 - 27934888
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||| | ||||||||| |||||||||||||| ||||||    
T  27934841 ttgcaaggattagcaattacagggacgaatttttaaatgacgcctaat 27934888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 43155850 - 43155897
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||| ||| |||||||||||||||||||| ||||||||||    
T  43155850 ttgccaggattaacgattacagggaccaatttttaaacgacccctaat 43155897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 44967392 - 44967439
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| |||||||||||||||||||| |||| |||||    
T  44967392 ttgccaggattagcgattacagggaccaatttttaaacgacctctaat 44967439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 50418991 - 50419038
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| || ||||||||||||||||| ||||||||||    
T  50418991 ttgccaggattagcgattagagggaccaatttttaaacgacccctaat 50419038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 13058106 - 13058064
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||| ||||| |||||||||||||| ||||||||||    
T  13058106 aggattagcgattacagagaccaatttttaaacgacccctaat 13058064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17356002 - 17355952
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||| ||||||    
T  17356002 agtttgcaaagattagcgaatacagcaaccaatttttaaacgactcctaat 17355952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 24711431 - 24711481
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||| |||  ||| ||||||||||||||| ||||||||||    
T  24711431 agtttgcaaggattaacgatgacatggaccaatttttaaacgacccctaat 24711481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 37976230 - 37976180
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||| |||||||||||||||| |||| |||||||| |||| |||||    
T  37976230 agtttgcaaagattagcgaatacaggaaccagtttttaaacgacctctaat 37976180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 39667133 - 39667175
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||| ||| |||||||||||||||||||||||||| ||||    
T  39667133 aggattaacgattacagggaccaatttttaaatgacccgtaat 39667175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 54713706 - 54713660
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccc 47  Q
    ||||||||||||||||||||||||| ||  |||||||||| ||||||    
T  54713706 agtttgcaaggattagcgaatacagagattaatttttaaacgacccc 54713660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 54858629 - 54858587
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||| ||||||||| |||||||||||||| ||||||    
T  54858629 aggattagcgattacagggactaatttttaaatgacgcctaat 54858587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 41582522 - 41582477
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccct 48  Q
    ||||| ||||||| ||| || |||||||||||||||||||||||||    
T  41582522 tttgccaggattaacgattagagggaccaatttttaaatgacccct 41582477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 23613376 - 23613336
Alignment:
Q  11 gattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||| |||| ||||||||||||||| ||||||||||    
T  23613376 gattagcgattacatggaccaatttttaaacgacccctaat 23613336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 40388459 - 40388507
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||| ||||||||||| || ||||||||||||||||||| ||| ||||    
T  40388459 tttgccaggattagcgattagagggaccaatttttaaatggcccttaat 40388507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 50750962 - 50750914
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||| ||||||||||| ||||||||| |||||||||| ||| ||||||    
T  50750962 tttgccaggattagcgattacagggacgaatttttaaacgacgcctaat 50750914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 54087056 - 54087096
Alignment:
Q  11 gattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||| ||| |||||||||||||||||||| ||||||||||    
T  54087056 gattaacgattacagggaccaatttttaaacgacccctaat 54087096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13692571 - 13692621
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13692571 agtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaat 13692621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 25230179 - 25230129
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25230179 agtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaat 25230129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 44045353 - 44045403
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  44045353 agtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaat 44045403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 6588760 - 6588710
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  6588760 agtttgcaaggattagcgaatacatggaccaatttttaaacgacccctaat 6588710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 6658198 - 6658248
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  6658198 agtttgcaaggattagcgaatacagggaccaatttttaaacgacctctaat 6658248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 16099375 - 16099425
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  16099375 agtttgcaaggattagtgaatacagggaccaatttttaaacgacccctaat 16099425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 37895424 - 37895374
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  37895424 agtttgcaaggattagcgaatacagggaccaatttttaaacgacccttaat 37895374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11163131 - 11163087
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacc 45  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  11163131 agtttgcaaggattagcgaatacagggaccaatttttaaacgacc 11163087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 36382478 - 36382528
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||| ||||    
T  36382478 agtttgcatggattagcgaatacagggaccaatttttaaacgacccttaat 36382528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 36480069 - 36480119
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||| ||||    
T  36480069 agtttgcaaggattagcgaatatagggaccaatttttaaacgacccttaat 36480119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 36755439 - 36755489
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||||||    
T  36755439 agtttgcaaggattagcgattatagggaccaatttttaaacgacccctaat 36755489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 39423866 - 39423916
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||| ||||| ||||||||||| ||||||||||    
T  39423866 agtttgcaaggattagcgaatatagggatcaatttttaaacgacccctaat 39423916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 39498630 - 39498680
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||| ||||||||||||||| || |||||||    
T  39498630 agtttgcaaggattagcgaatacatggaccaatttttaaacgatccctaat 39498680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 45556398 - 45556448
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||| ||||||||||||||| |||||||||||||| ||||||||||    
T  45556398 agtttgcaaagattagcgaatacagcgaccaatttttaaacgacccctaat 45556448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 25231201 - 25231249
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||| |||||||||||||||| ||||||||||||||| ||||||||||    
T  25231201 tttgctaggattagcgaatacatggaccaatttttaaacgacccctaat 25231249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 11163377 - 11163424
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  11163377 ttgccaggattagcgattacagggaccaatttttaaacgacccctaat 11163424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 16099129 - 16099082
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| |||||||| || |||||||||||||||||||||||||||||||    
T  16099129 ttgccaggattagtgattacagggaccaatttttaaatgacccctaat 16099082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9076418 - 9076468
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||| ||||||| | |||||||||||||| ||||||||||    
T  9076418 agtttgcaaggattaacgaatacggagaccaatttttaaacgacccctaat 9076468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 15848157 - 15848115
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||| |||||||||||||||||||| ||||||||||    
T  15848157 aggattagcgattacagggaccaatttttaaacgacccctaat 15848115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 34448146 - 34448196
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||| |||||| |||||||||||||||||  |||||||||    
T  34448146 agtttgcaaggattaacgaatatagggaccaatttttaaacaacccctaat 34448196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 44044191 - 44044141
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||| |||||||||| |||||||||||||||||||||||  |||||||||    
T  44044191 agttttcaaggattagtgaatacagggaccaatttttaaaccacccctaat 44044141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 44713872 - 44713822
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||||||  |||||||||||||| ||||| ||||    
T  44713872 agtttgcaaggattagcgaatacattgaccaatttttaaacgacccttaat 44713822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 30729696 - 30729659
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaa 40  Q
    |||||||||||||||||||| |||||||||||||||||    
T  30729696 tttgcaaggattagcgaatatagggaccaatttttaaa 30729659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 10713076 - 10713124
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||  ||||||||||||| ||||| ||||    
T  10713076 tttgcaaggattagcgaatacagaaaccaatttttaaacgacccttaat 10713124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 28228737 - 28228697
Alignment:
Q  11 gattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  28228737 gattaacgattacagggaccaatttttaaatgacccctaat 28228697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 28230092 - 28230140
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||| ||||||| ||| |||||||||||||||||||||||||| ||||    
T  28230092 tttgctaggattaacgattacagggaccaatttttaaatgacccataat 28230140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 3229718 - 3229757
Alignment:
Q  7 caaggattagcgaatacagggaccaatttttaaatgaccc 46  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  3229718 caaggattagcgaatacaaggaccaaattttaaatgaccc 3229757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 15604413 - 15604366
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| ||||||||| |||||||||||||| ||||||    
T  15604413 ttgccaggattagcgattacagggactaatttttaaatgacacctaat 15604366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 28226096 - 28226143
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| ||||||||| |||||||||||||| ||||||    
T  28226096 ttgccaggattagcgattacagggactaatttttaaatgacgcctaat 28226143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 39498384 - 39498337
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||| ||| |||||||||||||||||||| ||||||||||    
T  39498384 ttgccaggattaacgattacagggaccaatttttaaacgacccctaat 39498337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 45556186 - 45556139
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| |||||||||||||||||||| || |||||||    
T  45556186 ttgccaggattagcgattacagggaccaatttttaaacgatccctaat 45556139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2318861 - 2318911
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||| || ||||||||||| | ||||||||||||| ||||||||||    
T  2318861 agtttgcaacgaatagcgaatacatgaaccaatttttaaacgacccctaat 2318911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 3556360 - 3556410
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||| ||| ||||| |||||||||||||| ||||| ||||    
T  3556360 agtttgcaaggattaacgattacagagaccaatttttaaacgacccataat 3556410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 15848439 - 15848489
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| |||||||||||||||||||   ||||||||||||| ||||||||||    
T  15848439 agttcgcaaggattagcgaatacataaaccaatttttaaacgacccctaat 15848489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 34447882 - 34447840
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||| |||| || ||||||||||||||||||||||||||||    
T  34447882 aggatttgcgattatagggaccaatttttaaatgacccctaat 34447840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 199096 - 199048
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||| ||| |||||| || ||||||||||||| |||||||    
T  199096 tttgcaaggattaacgattacaggaactaatttttaaatgatccctaat 199048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 202709 - 202757
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||| ||||||| ||| |||| |||| |||||||||||||||||||||    
T  202709 tttgccaggattaacgattacatggacgaatttttaaatgacccctaat 202757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 3555325 - 3555277
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||| || ||||||||| |||||||||||||| ||||||||||    
T  3555325 tttgtaaggaataacgaatacagagaccaatttttaaacgacccctaat 3555277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 11721449 - 11721489
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgaccccta 49  Q
    |||||||  ||||||||||| ||||||||||||||||||||    
T  11721449 aggattaaagaatacagggatcaatttttaaatgaccccta 11721489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21370553 - 21370597
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacc 45  Q
    ||||||||||||||| |||||||| ||| ||||||||||| ||||    
T  21370553 agtttgcaaggattaacgaatacatggatcaatttttaaacgacc 21370597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 36479785 - 36479745
Alignment:
Q  11 gattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||| |||| ||||||||||||||| ||||||||||    
T  36479785 gattagcgattacatggaccaatttttaaacgacccctaat 36479745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 183298 - 183248
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  183298 agtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaat 183248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 37578269 - 37578219
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37578269 agtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaat 37578219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 34849086 - 34849038
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34849086 tttgcaaggattagcgaatacagggaccaatttttaaaagacccctaat 34849038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 34850418 - 34850466
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34850418 tttgcaaggattagcgaatacagggaccaatttttaaacgacccctaat 34850466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 6367913 - 6367963
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  6367913 agtttgcaaggattagcgaatacagggaccaatttttaaacgacccttaat 6367963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 26024743 - 26024793
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  26024743 agtttgcaaggattagcgattacagggaccaatttttaaacgacccctaat 26024793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30711678 - 30711728
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  30711678 agtttgcaaggattagcgaatacagagaccaatttttaaacgacccctaat 30711728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 43759173 - 43759223
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  43759173 agtttgcaaggattagcgaatacagggaccgatttttaaacgacccctaat 43759223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 47999200 - 47999150
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||    
T  47999200 agtttgcaaggattagcgaatacagggaccaatttttaaacgatccctaat 47999150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 49723077 - 49723127
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  49723077 agtttgcaaggattagcgaatacatggaccaatttttaaacgacccctaat 49723127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 1103812 - 1103856
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacc 45  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  1103812 agtttgcaaggattagcgaatacagggaccaatttttaaacgacc 1103856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 1841809 - 1841856
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccct 48  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||    
T  1841809 agtttgcaaggattagcgaatacagggaacaatttttaaacgacccct 1841856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 4960860 - 4960910
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||||| |||||||||||||||| |||| |||||    
T  4960860 agtttgcaaggattagcgaatacggggaccaatttttaaacgacctctaat 4960910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17661928 - 17661879
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  17661928 agtttgcaaggattagcgaataca-ggaccaatttttaaacgacccctaat 17661879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 17691294 - 17691248
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgaccccta 49  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  17691294 tttgcaaggattagcgattacagggaccaatttttaaacgaccccta 17691248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35473708 - 35473658
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  35473708 agtttgccaggattagcgattacagggaccaatttttaaacgacccctaat 35473658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 36694359 - 36694309
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  36694359 agtttgcaaggattagcgaatacatagaccaatttttaaacgacccctaat 36694309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 36710460 - 36710410
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  36710460 agtttgcaaggattagcgaatacatagaccaatttttaaacgacccctaat 36710410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 41099084 - 41099134
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||||||| |||||||||||||| |||| |||||    
T  41099084 agtttgcaaggattagcgaatacagagaccaatttttaaacgaccactaat 41099134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 46899138 - 46899088
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||| ||||||||||||| ||||||||||||||| ||||||||||    
T  46899138 agtttgcaagaattagcgaatacatggaccaatttttaaacgacccctaat 46899088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 13914143 - 13914095
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||| |||| |||||||||| ||||||||||    
T  13914143 tttgcaaggattagcgaatacatggactaatttttaaacgacccctaat 13914095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 6367636 - 6367589
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  6367636 ttgccaggattagcgattacagggaccaatttttaaacgacccctaat 6367589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 35152684 - 35152731
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||| ||| |||||||||| ||||||||||    
T  35152684 ttgcaaggattagcgaatacagagactaatttttaaacgacccctaat 35152731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 40772813 - 40772860
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||||||||| ||||| ||| ||||||||||    
T  40772813 ttgcaaggattagcgaatacagggaccgattttcaaacgacccctaat 40772860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 24009652 - 24009602
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| ||||||| ||||||||||||||| ||||||||||    
T  24009652 agttggcaaggattagtgaatacaaggaccaatttttaaacgacccctaat 24009602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 32917611 - 32917661
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||| ||||||||| |||||||||||||| ||||| ||||    
T  32917611 agtttgcaaggattaacgaatacagagaccaatttttaaacgacccttaat 32917661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 46899951 - 46900001
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||| |||||||||||||  |||||||||||||||||||| ||||    
T  46899951 agtttgcaagaattagcgaatacattgaccaatttttaaatgacccttaat 46900001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 48691225 - 48691175
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||| |||| ||||||||| |||||||||||||| ||||||||||    
T  48691225 agtttgcaagaattaacgaatacagcgaccaatttttaaacgacccctaat 48691175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 13300257 - 13300305
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||| |||||||| |||||||||||||| ||| ||||||    
T  13300257 tttgcaaggattagtgaatacagagaccaatttttaaacgacgcctaat 13300305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 17692538 - 17692586
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||  ||||||||| ||||||||| ||||||||||    
T  17692538 tttgcaaggattagcgataacagggaccgatttttaaacgacccctaat 17692586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 42267372 - 42267332
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgaccccta 49  Q
    |||||||  ||||||||||||||||||||||||||||||||    
T  42267372 aggattaaagaatacagggaccaatttttaaatgaccccta 42267332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 47999453 - 47999493
Alignment:
Q  11 gattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  47999453 gattagcgattacagggaccaatttttaaacgacccctaat 47999493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 183545 - 183588
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccc 47  Q
    |||| ||||||||||| |||||||||||||||||||| ||||||    
T  183545 ttgctaggattagcgattacagggaccaatttttaaacgacccc 183588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 4960614 - 4960567
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||  || ||||||||||| ||||||||||    
T  4960614 ttgcaaggattagcgaatacaaagagcaatttttaaacgacccctaat 4960567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 5735062 - 5735101
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaa 40  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  5735062 agtttgcaaggattagcgaatacatgaaccaatttttaaa 5735101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 14879312 - 14879359
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||| || |||||||||||||| || |||||||    
T  14879312 ttgcaaggattagcgaatatagagaccaatttttaaacgatccctaat 14879359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 17189028 - 17188981
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| ||||||||| |||||||||||||| ||||||    
T  17189028 ttgccaggattagcgattacagggactaatttttaaatgacgcctaat 17188981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 23209681 - 23209728
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| |||| ||||||||||||||| ||||||||||    
T  23209681 ttgccaggattagcgattacaaggaccaatttttaaacgacccctaat 23209728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 24905241 - 24905194
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||| | ||||||||| |||||||||||||| ||||||    
T  24905241 ttgcaaggattagcaattacagggacgaatttttaaatgacgcctaat 24905194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 25647958 - 25647911
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||| ||| |||||||||||||||||||| ||||||||||    
T  25647958 ttgccaggattaacgattacagggaccaatttttaaacgacccctaat 25647911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 26024497 - 26024450
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| ||||| |||||||||||||| ||||||||||    
T  26024497 ttgccaggattagcgattacagagaccaatttttaaacgacccctaat 26024450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 42533098 - 42533051
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||| |||||||| |||| |||||||||| ||||||||||    
T  42533098 ttgcaaggattaacgaatacatggactaatttttaaacgacccctaat 42533051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 19322969 - 19322919
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||| | || |||||||||| ||||| ||||    
T  19322969 agtttgcaaggattagcgaatacatgaacgaatttttaaacgacccgtaat 19322919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 31197134 - 31197092
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||| ||||||||| ||| |||||||||||||||||||||    
T  31197134 aggattaacgaatacagagacaaatttttaaatgacccctaat 31197092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 40210447 - 40210397
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||||||||||  |||||| ||||||| |||| |||||    
T  40210447 agtttgcaaggattagcgaatacaaagaccaaattttaaacgaccactaat 40210397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 40435418 - 40435372
Alignment:
Q  5 tgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||| ||||||||  |||||||||||||| ||||||||||    
T  40435418 tgcaaggattaacgaatacaatgaccaatttttaaacgacccctaat 40435372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 40772576 - 40772534
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||| |||||||||||||||||||| ||||| ||||    
T  40772576 aggattagcgattacagggaccaatttttaaacgacccataat 40772534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 41098802 - 41098760
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||| ||||| |||||||||||||| ||||||||||    
T  41098802 aggattagcgattacagagaccaatttttaaacgacccctaat 41098760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 46163099 - 46163057
Alignment:
Q  9 aggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||| |||| ||||||||||||||| ||||||||||    
T  46163099 aggattagcgattacatggaccaatttttaaacgacccctaat 46163057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 19017983 - 19018024
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacc 45  Q
    |||| |||||||||||||||| ||||||||||||||| ||||    
T  19017983 ttgccaggattagcgaatacatggaccaatttttaaacgacc 19018024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 5734084 - 5734037
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||||||| |||| | ||||||||||||| ||||||||||    
T  5734084 tttgcaaggattagcgattacatg-accaatttttaaacgacccctaat 5734037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7821305 - 7821348
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacc 45  Q
    ||||||||||||||||||||||||  |||||||||||||| ||||    
T  7821305 agtttgcaaggattagcgaataca-tgaccaatttttaaacgacc 7821348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 17189203 - 17189243
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgac 44  Q
    |||| ||||||||||| ||||||||| ||||||||||||||    
T  17189203 ttgccaggattagcgattacagggactaatttttaaatgac 17189243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 28011437 - 28011389
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaatc 52  Q
    |||| ||||||||| | ||||||||| |||||||||| |||||||||||    
T  28011437 ttgccaggattagcaattacagggacgaatttttaaacgacccctaatc 28011389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 32132379 - 32132331
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||| ||| |||| |||| ||||||||||||||| |||||    
T  32132379 tttgcaaggattaacgattacatggacgaatttttaaatgaccactaat 32132331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 34464516 - 34464476
Alignment:
Q  11 gattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||| |||| ||||||||||||||| ||||||||||    
T  34464516 gattagcgattacatggaccaatttttaaacgacccctaat 34464476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 42248822 - 42248858
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaattttt 37  Q
    |||||||||| |||||||||||||| |||||||||||    
T  42248822 agtttgcaagaattagcgaatacagagaccaattttt 42248858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 44522222 - 44522174
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||| ||||||| ||| ||||||| ||||||||||||||| |||||||    
T  44522222 tttgctaggattaacgattacagggtccaatttttaaatgatccctaat 44522174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 6432 - 6480
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6432 tttgcaaggattagcgaatacagggaccaatttttaaacgacccctaat 6480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 69316 - 69355
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  69316 agtttgcaaggattagcgaatacagggaccaatttttaaa 69355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 69039 - 68992
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| |||||||| || |||||||||||||||||||||||||||||||    
T  69039 ttgccaggattagtgattacagggaccaatttttaaatgacccctaat 68992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 5039 - 4989
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||||||| ||||| ||||||||||| ||||||||||    
T  5039 agtttgcaaggattagcgaatatagggatcaatttttaaacgacccctaat 4989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 6331 - 6379
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||||||| ||| || | |||||||||||||| |||||||||||    
T  6331 tttgcaaggattatcgattataaggaccaatttttaagtgacccctaat 6379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 139746 - 139699
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  139746 ttgccaggattagcgattacagggaccaatttttaaacgacccctaat 139699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 139992 - 140042
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||| ||||| |||||||||||||||||||||||  |||||||||    
T  139992 agtttgcaagaattagtgaatacagggaccaatttttaaacaacccctaat 140042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 19932 - 19884
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||||||  ||||||||||||||||||| ||||| ||||    
T  19932 tttgcaaggattagcgatcacagggaccaatttttaaacgacccataat 19884  T

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Target: scaffold0205 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 21083 - 21036
Alignment:
Q  4 ttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    |||||||||||||| | ||||||||| |||||||||||||| ||||||    
T  21083 ttgcaaggattagcaattacagggacgaatttttaaatgacgcctaat 21036  T

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Target: scaffold0008 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 239904 - 239951
Alignment:
Q  3 tttgcaaggattagcgaatacagggaccaatttttaaatgacccctaa 50  Q
    ||||| ||||||| ||| |||||| |||||||||||||||||||||||    
T  239904 tttgccaggattatcgattacaggaaccaatttttaaatgacccctaa 239951  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2092 - 2142
Alignment:
Q  1 agtttgcaaggattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||| ||||||| | | |||||||||||||||||| ||||||||||    
T  2092 agtttgcaaagattagcaatttcagggaccaatttttaaacgacccctaat 2142  T

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Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 1836 - 1796
Alignment:
Q  11 gattagcgaatacagggaccaatttttaaatgacccctaat 51  Q
    ||||||||| ||||||||||||||||| || ||||||||||    
T  1836 gattagcgattacagggaccaattttttaacgacccctaat 1796  T

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