View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18388_high_6 (Length: 546)

Name: NF18388_high_6
Description: NF18388
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18388_high_6
NF18388_high_6
[»] chr1 (57 HSPs)
chr1 (19-546)||(51584470-51584997)
chr1 (404-546)||(28528466-28528608)
chr1 (414-537)||(7083011-7083134)
chr1 (404-502)||(50771629-50771727)
chr1 (404-512)||(10272369-10272477)
chr1 (407-516)||(27637690-27637799)
chr1 (404-536)||(12261752-12261884)
chr1 (404-503)||(52442600-52442699)
chr1 (404-505)||(43898340-43898444)
chr1 (413-546)||(40419759-40419891)
chr1 (417-516)||(19969271-19969370)
chr1 (404-546)||(26016548-26016690)
chr1 (404-545)||(50806780-50806919)
chr1 (410-486)||(29577231-29577307)
chr1 (407-486)||(8342970-8343049)
chr1 (404-486)||(853874-853956)
chr1 (404-486)||(6025716-6025798)
chr1 (405-495)||(37263443-37263532)
chr1 (404-546)||(38868993-38869135)
chr1 (404-486)||(42501219-42501301)
chr1 (410-458)||(36339920-36339968)
chr1 (404-535)||(15577529-15577660)
chr1 (404-486)||(12231476-12231558)
chr1 (404-486)||(30834066-30834148)
chr1 (404-458)||(32404643-32404697)
chr1 (404-538)||(33560895-33561029)
chr1 (404-486)||(43423830-43423912)
chr1 (412-456)||(2544717-2544761)
chr1 (426-486)||(8203223-8203283)
chr1 (404-480)||(8796320-8796396)
chr1 (426-546)||(29807989-29808109)
chr1 (404-456)||(44008690-44008742)
chr1 (406-461)||(3818970-3819025)
chr1 (416-458)||(8628153-8628195)
chr1 (416-458)||(9509441-9509483)
chr1 (416-458)||(9599511-9599553)
chr1 (404-546)||(28511830-28511972)
chr1 (404-486)||(30396818-30396900)
chr1 (433-538)||(30445251-30445350)
chr1 (404-458)||(52073169-52073223)
chr1 (404-457)||(17815590-17815643)
chr1 (425-458)||(34827221-34827254)
chr1 (416-461)||(48431520-48431565)
chr1 (404-449)||(49377435-49377480)
chr1 (398-454)||(6641216-6641272)
chr1 (426-486)||(40416504-40416564)
chr1 (416-458)||(26299208-26299250)
chr1 (416-458)||(39318252-39318294)
chr1 (416-454)||(52561710-52561748)
chr1 (429-458)||(7762554-7762583)
chr1 (406-459)||(26444477-26444530)
chr1 (429-458)||(29128919-29128948)
chr1 (417-458)||(41560353-41560394)
chr1 (404-444)||(13827701-13827741)
chr1 (426-458)||(40228123-40228155)
chr1 (426-486)||(46388509-46388569)
chr1 (426-486)||(46394953-46395013)
[»] chr4 (67 HSPs)
chr4 (404-540)||(31961301-31961437)
chr4 (404-538)||(31897465-31897599)
chr4 (410-512)||(46372141-46372243)
chr4 (411-540)||(35555685-35555811)
chr4 (404-538)||(42285740-42285872)
chr4 (423-513)||(10209166-10209256)
chr4 (404-481)||(26356730-26356807)
chr4 (426-546)||(44360219-44360339)
chr4 (402-538)||(53540399-53540535)
chr4 (404-546)||(10775500-10775640)
chr4 (408-537)||(2589187-2589316)
chr4 (410-515)||(6478743-6478848)
chr4 (404-461)||(49987519-49987576)
chr4 (410-535)||(47147490-47147613)
chr4 (398-458)||(35690376-35690436)
chr4 (404-459)||(1427400-1427455)
chr4 (415-486)||(2557761-2557832)
chr4 (404-486)||(42639109-42639191)
chr4 (395-486)||(49738639-49738726)
chr4 (404-461)||(7682024-7682081)
chr4 (409-486)||(18966721-18966798)
chr4 (404-481)||(42293359-42293436)
chr4 (476-540)||(13262395-13262459)
chr4 (405-461)||(13805379-13805435)
chr4 (409-461)||(45569123-45569175)
chr4 (408-480)||(48033200-48033272)
chr4 (426-461)||(8599055-8599090)
chr4 (404-458)||(21107103-21107157)
chr4 (404-486)||(21945727-21945809)
chr4 (416-458)||(28351682-28351724)
chr4 (428-478)||(37488226-37488276)
chr4 (416-458)||(45204956-45204998)
chr4 (404-461)||(8459149-8459206)
chr4 (404-445)||(11389835-11389876)
chr4 (404-461)||(42566350-42566407)
chr4 (417-454)||(55809111-55809148)
chr4 (405-457)||(34233142-34233194)
chr4 (404-448)||(45184258-45184302)
chr4 (410-486)||(50680857-50680933)
chr4 (409-461)||(51252567-51252619)
chr4 (404-456)||(53517641-53517693)
chr4 (502-542)||(55771719-55771759)
chr4 (417-457)||(55805789-55805829)
chr4 (502-542)||(55835955-55835995)
chr4 (407-486)||(934520-934598)
chr4 (395-442)||(29398920-29398967)
chr4 (404-462)||(15661971-15662029)
chr4 (404-458)||(30853454-30853508)
chr4 (409-451)||(31339651-31339693)
chr4 (416-458)||(31959931-31959973)
chr4 (404-538)||(38903755-38903888)
chr4 (416-458)||(39708556-39708598)
chr4 (404-458)||(44860944-44860998)
chr4 (416-458)||(51421853-51421895)
chr4 (404-454)||(55028927-55028977)
chr4 (433-546)||(17900620-17900733)
chr4 (407-444)||(25257713-25257749)
chr4 (424-461)||(33225947-33225984)
chr4 (404-461)||(44667359-44667416)
chr4 (408-461)||(44719478-44719531)
chr4 (408-461)||(51009225-51009278)
chr4 (404-457)||(55579143-55579196)
chr4 (498-546)||(883389-883437)
chr4 (502-546)||(6957807-6957851)
chr4 (425-461)||(20999132-20999168)
chr4 (433-461)||(21214700-21214728)
chr4 (502-546)||(33227418-33227462)
[»] chr2 (44 HSPs)
chr2 (404-546)||(44437750-44437892)
chr2 (410-546)||(12489831-12489967)
chr2 (404-539)||(42543346-42543481)
chr2 (406-516)||(5759054-5759164)
chr2 (411-546)||(4598591-4598726)
chr2 (404-480)||(19235079-19235155)
chr2 (404-461)||(26784454-26784511)
chr2 (425-538)||(33287553-33287666)
chr2 (406-486)||(43832211-43832291)
chr2 (404-479)||(38435063-38435138)
chr2 (404-486)||(18188863-18188945)
chr2 (404-486)||(37470222-37470304)
chr2 (413-486)||(26670888-26670961)
chr2 (404-461)||(33504334-33504391)
chr2 (404-458)||(12141655-12141709)
chr2 (463-545)||(12470927-12471009)
chr2 (487-541)||(15025688-15025742)
chr2 (450-540)||(20129636-20129726)
chr2 (416-458)||(45543189-45543231)
chr2 (436-516)||(28960270-28960351)
chr2 (425-486)||(43752036-43752097)
chr2 (404-456)||(4481599-4481651)
chr2 (425-481)||(7431983-7432039)
chr2 (404-452)||(23714384-23714432)
chr2 (404-452)||(24102056-24102104)
chr2 (404-511)||(9556433-9556540)
chr2 (411-466)||(36869976-36870031)
chr2 (410-461)||(37481731-37481782)
chr2 (427-481)||(12026099-12026153)
chr2 (416-546)||(18959034-18959164)
chr2 (404-486)||(19024289-19024371)
chr2 (486-540)||(19334187-19334241)
chr2 (416-486)||(19855585-19855655)
chr2 (405-459)||(32754798-32754852)
chr2 (395-468)||(786923-786996)
chr2 (412-481)||(1626314-1626383)
chr2 (404-461)||(29548751-29548808)
chr2 (404-461)||(37452340-37452397)
chr2 (413-528)||(2807565-2807678)
chr2 (502-546)||(3866281-3866325)
chr2 (416-456)||(13592417-13592457)
chr2 (438-546)||(23915722-23915830)
chr2 (398-458)||(35755366-35755426)
chr2 (417-453)||(43573251-43573287)
[»] chr5 (49 HSPs)
chr5 (405-538)||(33667547-33667680)
chr5 (404-540)||(1525755-1525891)
chr5 (404-546)||(2713055-2713189)
chr5 (404-537)||(10082783-10082916)
chr5 (404-536)||(11002460-11002592)
chr5 (404-511)||(21952468-21952573)
chr5 (404-516)||(31635979-31636091)
chr5 (404-516)||(14749418-14749530)
chr5 (398-536)||(21915986-21916123)
chr5 (404-481)||(38578615-38578692)
chr5 (410-540)||(9235166-9235294)
chr5 (404-458)||(6859492-6859546)
chr5 (404-461)||(3775181-3775238)
chr5 (409-461)||(15489606-15489658)
chr5 (449-545)||(37065632-37065728)
chr5 (446-525)||(1174642-1174721)
chr5 (410-481)||(12576954-12577025)
chr5 (407-506)||(17213188-17213287)
chr5 (464-546)||(3442900-3442982)
chr5 (404-542)||(15369830-15369967)
chr5 (404-451)||(18698905-18698952)
chr5 (418-461)||(29922409-29922452)
chr5 (416-458)||(28005-28047)
chr5 (410-456)||(5305756-5305802)
chr5 (404-458)||(6889104-6889158)
chr5 (404-486)||(7678589-7678671)
chr5 (398-495)||(8492413-8492513)
chr5 (419-461)||(27998567-27998609)
chr5 (404-486)||(42199397-42199479)
chr5 (404-486)||(42199504-42199586)
chr5 (425-486)||(79645-79706)
chr5 (404-506)||(34734463-34734567)
chr5 (404-481)||(36123276-36123353)
chr5 (409-478)||(38684596-38684665)
chr5 (444-516)||(1935273-1935345)
chr5 (410-486)||(14667888-14667964)
chr5 (409-461)||(38341539-38341591)
chr5 (426-461)||(1001296-1001331)
chr5 (426-461)||(3775279-3775314)
chr5 (452-546)||(28411835-28411929)
chr5 (416-458)||(32516679-32516720)
chr5 (405-458)||(6788179-6788232)
chr5 (404-457)||(7359378-7359431)
chr5 (404-457)||(9917568-9917621)
chr5 (429-458)||(15588505-15588534)
chr5 (425-486)||(30588579-30588640)
chr5 (416-455)||(8082073-8082113)
chr5 (433-461)||(11753144-11753172)
chr5 (404-452)||(40938034-40938082)
[»] chr6 (22 HSPs)
chr6 (404-539)||(10617270-10617405)
chr6 (404-542)||(7513422-7513561)
chr6 (413-504)||(38883-38974)
chr6 (410-546)||(31818648-31818784)
chr6 (410-486)||(34594-34670)
chr6 (404-492)||(1747724-1747812)
chr6 (405-540)||(8364668-8364803)
chr6 (404-461)||(33997658-33997715)
chr6 (404-447)||(3963910-3963953)
chr6 (404-458)||(9593825-9593877)
chr6 (404-457)||(4948422-4948475)
chr6 (404-457)||(4955393-4955446)
chr6 (404-537)||(7080451-7080584)
chr6 (425-481)||(1681615-1681671)
chr6 (416-454)||(5095957-5095995)
chr6 (416-458)||(7133869-7133911)
chr6 (416-458)||(7136792-7136834)
chr6 (497-543)||(30789106-30789152)
chr6 (404-461)||(32913375-32913433)
chr6 (497-546)||(9706974-9707023)
chr6 (418-458)||(6055888-6055928)
chr6 (427-459)||(13674759-13674791)
[»] chr3 (46 HSPs)
chr3 (411-546)||(27893207-27893342)
chr3 (407-546)||(37351521-37351660)
chr3 (404-495)||(26990324-26990415)
chr3 (399-535)||(11581550-11581686)
chr3 (420-546)||(31454254-31454380)
chr3 (404-461)||(31261056-31261113)
chr3 (394-481)||(2340811-2340898)
chr3 (398-456)||(43254996-43255054)
chr3 (425-546)||(31452990-31453111)
chr3 (416-461)||(39600795-39600840)
chr3 (416-540)||(54365010-54365134)
chr3 (404-479)||(40982007-40982082)
chr3 (408-546)||(659640-659778)
chr3 (404-486)||(21200659-21200741)
chr3 (404-461)||(46146207-46146264)
chr3 (410-458)||(33755459-33755507)
chr3 (430-481)||(36820071-36820122)
chr3 (404-458)||(40116585-40116639)
chr3 (404-546)||(42510045-42510187)
chr3 (410-486)||(29475805-29475879)
chr3 (404-461)||(37228193-37228250)
chr3 (404-457)||(38430959-38431012)
chr3 (478-546)||(3987519-3987587)
chr3 (416-459)||(30294237-30294280)
chr3 (427-458)||(34844690-34844721)
chr3 (424-495)||(41087875-41087946)
chr3 (427-458)||(45486969-45487000)
chr3 (406-486)||(46431768-46431844)
chr3 (411-458)||(53998755-53998802)
chr3 (415-461)||(11284115-11284160)
chr3 (404-458)||(14783673-14783727)
chr3 (408-466)||(22902913-22902971)
chr3 (427-461)||(43308696-43308730)
chr3 (416-458)||(48508358-48508400)
chr3 (425-458)||(19676198-19676231)
chr3 (425-458)||(34719197-34719230)
chr3 (404-461)||(37228039-37228096)
chr3 (410-458)||(41482255-41482304)
chr3 (497-546)||(53519784-53519833)
chr3 (416-456)||(54128501-54128542)
chr3 (425-461)||(21427696-21427732)
chr3 (410-458)||(23534687-23534735)
chr3 (502-546)||(32170614-32170658)
chr3 (404-436)||(40743287-40743319)
chr3 (426-486)||(44443293-44443353)
chr3 (502-546)||(52139009-52139053)
[»] chr7 (37 HSPs)
chr7 (404-546)||(19119453-19119594)
chr7 (410-546)||(34745864-34746000)
chr7 (404-540)||(5336031-5336165)
chr7 (404-461)||(14593871-14593928)
chr7 (404-461)||(16013394-16013451)
chr7 (404-458)||(28628050-28628104)
chr7 (408-481)||(40830317-40830390)
chr7 (414-486)||(45601597-45601669)
chr7 (395-506)||(36514277-36514387)
chr7 (425-546)||(12966148-12966269)
chr7 (404-461)||(30814785-30814842)
chr7 (406-486)||(24549777-24549857)
chr7 (404-458)||(18605263-18605317)
chr7 (404-538)||(48735938-48736071)
chr7 (410-546)||(22174117-22174253)
chr7 (410-461)||(44401239-44401290)
chr7 (429-516)||(45558467-45558553)
chr7 (410-457)||(47848791-47848838)
chr7 (404-458)||(18637673-18637727)
chr7 (404-458)||(18651107-18651161)
chr7 (456-538)||(25578023-25578105)
chr7 (416-458)||(40980045-40980087)
chr7 (426-459)||(21517496-21517529)
chr7 (420-457)||(36136891-36136928)
chr7 (404-461)||(42177132-42177189)
chr7 (414-486)||(1569137-1569209)
chr7 (404-460)||(6420605-6420661)
chr7 (404-460)||(32368452-32368508)
chr7 (398-458)||(38920875-38920935)
chr7 (420-460)||(43282536-43282576)
chr7 (426-481)||(29653640-29653695)
chr7 (404-455)||(36245524-36245575)
chr7 (404-459)||(38135329-38135384)
chr7 (427-506)||(38921157-38921236)
chr7 (404-461)||(28359368-28359426)
chr7 (416-458)||(28562483-28562525)
chr7 (425-461)||(35713830-35713866)
[»] chr8 (54 HSPs)
chr8 (404-540)||(7531679-7531815)
chr8 (405-516)||(32043702-32043813)
chr8 (404-546)||(16351489-16351630)
chr8 (410-546)||(39953293-39953429)
chr8 (415-546)||(30812845-30812976)
chr8 (404-486)||(38178349-38178431)
chr8 (404-486)||(10079996-10080078)
chr8 (416-546)||(43733330-43733459)
chr8 (404-458)||(45512612-45512666)
chr8 (427-516)||(26685978-26686067)
chr8 (431-546)||(39967528-39967643)
chr8 (404-486)||(79138-79220)
chr8 (408-534)||(4011198-4011324)
chr8 (404-466)||(25985629-25985691)
chr8 (430-540)||(30456329-30456439)
chr8 (404-486)||(35643695-35643777)
chr8 (438-516)||(38901878-38901956)
chr8 (404-461)||(2216399-2216456)
chr8 (404-461)||(37826402-37826459)
chr8 (404-455)||(29700387-29700438)
chr8 (404-486)||(24399878-24399960)
chr8 (404-546)||(32931072-32931213)
chr8 (416-458)||(45419358-45419400)
chr8 (408-540)||(3079640-3079770)
chr8 (409-461)||(16994558-16994610)
chr8 (417-457)||(29709821-29709861)
chr8 (410-461)||(5127384-5127435)
chr8 (404-459)||(9904998-9905053)
chr8 (425-540)||(17491689-17491804)
chr8 (419-486)||(23023351-23023418)
chr8 (404-467)||(38409130-38409193)
chr8 (425-459)||(5908778-5908812)
chr8 (416-458)||(28169515-28169557)
chr8 (404-454)||(29520761-29520810)
chr8 (404-486)||(30783131-30783213)
chr8 (404-486)||(35362739-35362821)
chr8 (411-461)||(41444454-41444506)
chr8 (404-480)||(9070099-9070175)
chr8 (420-540)||(24558610-24558730)
chr8 (404-540)||(43904700-43904836)
chr8 (416-459)||(33827873-33827916)
chr8 (416-458)||(13589602-13589644)
chr8 (408-466)||(16971863-16971921)
chr8 (412-486)||(30198355-30198429)
chr8 (404-458)||(35914718-35914772)
chr8 (405-458)||(27037747-27037800)
chr8 (404-461)||(30748568-30748625)
chr8 (418-486)||(39388907-39388976)
chr8 (425-457)||(14903693-14903725)
chr8 (404-456)||(16917294-16917346)
chr8 (404-452)||(25985723-25985771)
chr8 (426-458)||(28269795-28269827)
chr8 (425-461)||(38392007-38392043)
chr8 (497-545)||(42854034-42854082)
[»] scaffold0325 (1 HSPs)
scaffold0325 (408-481)||(11912-11985)
[»] scaffold0018 (2 HSPs)
scaffold0018 (404-486)||(178509-178591)
scaffold0018 (404-452)||(43991-44039)
[»] scaffold1609 (1 HSPs)
scaffold1609 (417-468)||(1060-1111)
[»] scaffold0050 (1 HSPs)
scaffold0050 (414-540)||(58261-58387)
[»] scaffold0006 (1 HSPs)
scaffold0006 (430-540)||(163229-163338)
[»] scaffold1259 (1 HSPs)
scaffold1259 (429-458)||(1636-1665)


Alignment Details
Target: chr1 (Bit Score: 504; Significance: 0; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 504; E-Value: 0
Query Start/End: Original strand, 19 - 546
Target Start/End: Original strand, 51584470 - 51584997
Alignment:
Q  19 aatgcaagggatacatgtacggctatttgaattggaatagcttaatggcagattcgtttaacattaaaacaaaatataaactaatgaatgatagaaagaa 118  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51584470 aatgcaagggatacatgtagggctatttgaattggaatagcttaatggcagattcgtttaacattaaaacaaaatataaactaatgaatgatagaaagaa 51584569  T
Q  119 acacaacttacttatcccttctcatgctcttaaacacagtccgagcttgttctaccattcccgatatagaaaatgcatcaagcaaaatattgtaagcctt 218  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51584570 acacaacttacttatcccttctcatgctcttaaacacaatccgagcttgttctaccattcccgatatagaaaatgcatcaagcaaaatattgtaagcctt 51584669  T
Q  219 ccgagttggtctgcaaaaggaagagaatactgtgattttattgaaacatggataaattaaaatttatttagcaacagaatcagaaaataacagttgtcaa 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51584670 ccgagttggtctgcaaaaggaagagaatactgtgattttattgaaacatggataaattaaaatttatttagcaacagaatcagaaaataacagttgtcaa 51584769  T
Q  319 gacagacagccattttcactaaaatgttccacataataaaaaattatcaaagaagaaaactaattgtttatgcacaatagaggtaagtcaaatcactaga 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51584770 gacagacagccattttcactaaaatgttccacataataaaaaattatcaaagaagaaaactaattgtttatgcacaatagaggtaagtcaaatcactaga 51584869  T
Q  419 ggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacactatgac 518  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  51584870 ggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatagaacactatgac 51584969  T
Q  519 attgtttgatccatgtagccgatcccac 546  Q
    |||||||||| |||||||| || |||||    
T  51584970 attgtttgattcatgtagcagaccccac 51584997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 404 - 546
Target Start/End: Original strand, 28528466 - 28528608
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    ||||||||| ||||| ||||||||||||||| ||||||||||| |||||||||||||| |||||| || ||||||||| ||||||||||||| |||||||    
T  28528466 agtcaaatccctagaagtaggggaagacctaaaaaaactataacagaaactattaagaaggatctagagattaatgagttggagaaagacatggtttttg 28528565  T
Q  504 atataacactatgacattgtttgatccatgtagccgatcccac 546  Q
    ||| | ||||||| | | ||||||| ||||||||||| |||||    
T  28528566 atagaccactatggcgtcgtttgattcatgtagccgaccccac 28528608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 414 - 537
Target Start/End: Original strand, 7083011 - 7083134
Alignment:
Q  414 ctagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacact 513  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||| || || ||||||||| ||||||||||||| | || ||||| ||||||    
T  7083011 ctagaggtaggggaagacctagaaaagctataagagaaactattaagatggaactagagattaatgagttggagaaagacatcggttatgatagaacact 7083110  T
Q  514 atgacattgtttgatccatgtagc 537  Q
    ||| | | ||||||| ||||||||    
T  7083111 atggcgtcgtttgattcatgtagc 7083134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 404 - 502
Target Start/End: Complemental strand, 50771727 - 50771629
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgttttt 502  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||| || || |||||| || ||||||||||||| ||||||    
T  50771727 agtcaaatgactagaggtaggggaagacctagaaaaactataagcgaaactattaagaaggacctagagattaataagttggagaaagacatggttttt 50771629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 404 - 512
Target Start/End: Original strand, 10272369 - 10272477
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||| || |||||| ||  ||||||| || | |||||||    
T  10272369 agtcaaatcactagaggtaggggaagacctagaaaacttataagagaaactattaagaaggatctagaaattaataagtaggagaaacacctggtttttg 10272468  T
Q  504 atataacac 512  Q
    ||| |||||    
T  10272469 atagaacac 10272477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 407 - 516
Target Start/End: Complemental strand, 27637799 - 27637690
Alignment:
Q  407 caaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgata 506  Q
    |||||||||||||||||||||||||||| ||||||| | ||||||||||| |||| |||||| |  || |||||| ||||||||||||| ||||||||||    
T  27637799 caaatcactagaggtaggggaagacctaaaaaaacttttagagaaactatcaagaaggatctagtgatcaatgagttggagaaagacatggtttttgata 27637700  T
Q  507 taacactatg 516  Q
     || ||||||    
T  27637699 gaatactatg 27637690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 404 - 536
Target Start/End: Complemental strand, 12261884 - 12261752
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||| | |  | |  |||||| || ||||||||||||| |||||||    
T  12261884 agtcaaatcactagaggtggggtaagacctagaaaaactataagagaaactagtaagaagaaattagggattaattagttggagaaagacatggtttttg 12261785  T
Q  504 atataacactatgacattgtttgatccatgtag 536  Q
    ||| ||| || |||  | ||||||| |||||||    
T  12261784 atagaacgctgtgatgtcgtttgattcatgtag 12261752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 404 - 503
Target Start/End: Complemental strand, 52442699 - 52442600
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    ||||||||| |||||||||| ||||||||||||| || ||||||||||||||| |||| |||||| ||  |||||||| |||| |||||||| |||||||    
T  52442699 agtcaaatctctagaggtagaggaagacctagaacaaatataagagaaactatcaagaaggatctagatgttaatgagttggataaagacatagtttttg 52442600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 404 - 505
Target Start/End: Original strand, 43898340 - 43898444
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatt---aagagggatctggacattaatgagctggagaaagacattgttt 500  Q
    ||||||||||| | |||||||| ||||||| |||||||||||||||||||||||   |||| |||||| || ||||||||| |||||||| |||| ||||    
T  43898340 agtcaaatcaccaaaggtagggaaagacctggaaaaactataagagaaactatttagaagaaggatctagagattaatgagttggagaaaaacatggttt 43898439  T
Q  501 ttgat 505  Q
    |||||    
T  43898440 ttgat 43898444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 413 - 546
Target Start/End: Original strand, 40419759 - 40419891
Alignment:
Q  413 actagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacac 512  Q
    |||||||||||||| |||| ||||||| |||||  ||||||||||| || |||||| || || |||||| ||||||||||||| |||||||||| | |||    
T  40419759 actagaggtaggggtagacatagaaaatctatacaagaaactattatgaaggatctagagataaatgagttggagaaagacatggtttttgatagatcac 40419858  T
Q  513 tatgacattgtttgatccatgtagccgatcccac 546  Q
    |||| | | |||| || ||||||||||| |||||    
T  40419859 tatggcgtcgttt-attcatgtagccgaccccac 40419891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 417 - 516
Target Start/End: Complemental strand, 19969370 - 19969271
Alignment:
Q  417 gaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacactatg 516  Q
    |||||||| |||||||||||||||||||||||||||||||||| |  ||||| || ||||||||| ||||||||  ||| || ||||| | |||||||||    
T  19969370 gaggtaggagaagacctagaaaaactataagagaaactattaacaaagatctagagattaatgagttggagaaattcatggtctttgacagaacactatg 19969271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 404 - 546
Target Start/End: Original strand, 26016548 - 26016690
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    ||||| ||||||||||||| | | ||||||||||||||||||||||||||||||| ||  ||||| || || |||||| | |||||| |||| |||||||    
T  26016548 agtcagatcactagaggtaagagtagacctagaaaaactataagagaaactattaggaatgatctagagataaatgagttagagaaaaacatggtttttg 26016647  T
Q  504 atataacactatgacattgtttgatccatgtagccgatcccac 546  Q
     || |||| | || | | ||||||| |||||||| || |||||    
T  26016648 gtagaacattgtggcgtcgtttgatacatgtagctgagcccac 26016690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 404 - 545
Target Start/End: Original strand, 50806780 - 50806919
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    ||||||||||||||| ||||  |||||||||||||||| |||||||||||||| |||| |||  | || ||||||| | |||| ||| | || |||| ||    
T  50806780 agtcaaatcactagaagtagatgaagacctagaaaaacaataagagaaactatcaagaagga--tagagattaatgcgttggataaaaatatggtttatg 50806877  T
Q  504 atataacactatgacattgtttgatccatgtagccgatccca 545  Q
    ||| ||||||||| | ||||||||| |||||| |||| ||||    
T  50806878 ataaaacactatggcgttgtttgattcatgtaaccgacccca 50806919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 410 - 486
Target Start/End: Complemental strand, 29577307 - 29577231
Alignment:
Q  410 atcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    |||||||||||||| ||||||||||||||||||| || | ||||||||||||  ||||| || ||||||||||||||    
T  29577307 atcactagaggtagaggaagacctagaaaaactacaacataaactattaagaaagatctagagattaatgagctgga 29577231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 407 - 486
Target Start/End: Complemental strand, 8343049 - 8342970
Alignment:
Q  407 caaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||| ||||| |  ||||| || ||||||||| ||||    
T  8343049 caaatcactagagatagaggaagacctagaaaaactataagagaaacaattaataaagatctagagattaatgagttgga 8342970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 853956 - 853874
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    ||||||||||||||||| || |||||||||| |||| ||||| ||||||||||||||| |||||| || |||| |||| ||||    
T  853956 agtcaaatcactagaggcagaggaagacctaaaaaatctatacgagaaactattaagaaggatctagagattagtgagttgga 853874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 404 - 486
Target Start/End: Original strand, 6025716 - 6025798
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    ||||||||||||||||| || |||||||||||||||||||||||||| |||| ||| |  ||||| || ||||||||| ||||    
T  6025716 agtcaaatcactagaggcagaggaagacctagaaaaactataagagatactagtaaaaaagatctagagattaatgagttgga 6025798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 405 - 495
Target Start/End: Original strand, 37263443 - 37263532
Alignment:
Q  405 gtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacat 495  Q
    |||||||||||||||||||||||||||||||||| ||||| || |||||||| ||||  ||||| || || |||||| |||||||| ||||    
T  37263443 gtcaaatcactagaggtaggggaagacctagaaatactattagtgaaactatcaaga-agatctagagatcaatgagttggagaaacacat 37263532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 404 - 546
Target Start/End: Original strand, 38868993 - 38869135
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    |||||||||| |||||| ||  ||||||||||||||||||||||||||| ||||||||  ||||| |  ||||||| | |||| | | | || || | ||    
T  38868993 agtcaaatcattagaggcagaagaagacctagaaaaactataagagaaattattaagaaagatctagcgattaatgggttggatagatatatggtatatg 38869092  T
Q  504 atataacactatgacattgtttgatccatgtagccgatcccac 546  Q
    ||| |||| |||| | | ||||||||||||||||||| |||||    
T  38869093 atagaacattatggcgtcgtttgatccatgtagccgaccccac 38869135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 404 - 486
Target Start/End: Original strand, 42501219 - 42501301
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||||||  |||||  | ||||||||| ||||    
T  42501219 agtcaaatcattagaggtagaggaaaacctagaaaaactataagagaaattattaagaaagatctatagattaatgagttgga 42501301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 410 - 458
Target Start/End: Complemental strand, 36339968 - 36339920
Alignment:
Q  410 atcactagaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||    
T  36339968 atcactagaggtagaggaagacctagaaaaactatcagagaaactatta 36339920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 404 - 535
Target Start/End: Original strand, 15577529 - 15577660
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    ||||| |||||||||||||| |||||| ||| |||||  ||||||||||||||||||| |||| | || ||||||||| |||| | ||| ||  | ||||    
T  15577529 agtcacatcactagaggtagaggaagatctaaaaaaataataagagaaactattaagaaggatatagagattaatgagttggatagagatatgatatttg 15577628  T
Q  504 atataacactatgacattgtttgatccatgta 535  Q
    ||| |||| |||    ||||||||||||||||    
T  15577629 atagaacattattgtgttgtttgatccatgta 15577660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 404 - 486
Target Start/End: Original strand, 12231476 - 12231558
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    ||||||||||||| |||| | |||| || |||||||||||||||||| ||||||||||  ||||| || ||||||||| ||||    
T  12231476 agtcaaatcactaaaggtggaggaatacttagaaaaactataagagagactattaagaaagatctcgagattaatgagttgga 12231558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 30834148 - 30834066
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    |||||||||  |||||| || ||||||||||||||| |||||||||||||||||| ||  ||||| || ||||||||| ||||    
T  30834148 agtcaaatcgatagagggagaggaagacctagaaaagctataagagaaactattacgaaagatctagagattaatgagttgga 30834066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 404 - 458
Target Start/End: Complemental strand, 32404697 - 32404643
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    ||||| ||||| |||||||| |||||||||| |||||||||||||||||||||||    
T  32404697 agtcatatcacaagaggtagaggaagacctacaaaaactataagagaaactatta 32404643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 404 - 538
Target Start/End: Complemental strand, 33561029 - 33560895
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    ||||||||||||||||| || ||||| |||||||||||| |||| ||||||||||||   ||||| || ||||  ||| |||| | | | || || | |     
T  33561029 agtcaaatcactagaggcagaggaagtcctagaaaaactgtaagggaaactattaagtaagatctagagattagcgagttggatataaatatggtatatc 33560930  T
Q  504 atataacactatgacattgtttgatccatgtagcc 538  Q
    | | |||| ||||||||||||||||||||||||||    
T  33560929 agagaacattatgacattgtttgatccatgtagcc 33560895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 404 - 486
Target Start/End: Original strand, 43423830 - 43423912
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    |||||||||||||||||||| |||||||||||||||| || |||||| || |||||||  ||||| || |||| |||| ||||    
T  43423830 agtcaaatcactagaggtagaggaagacctagaaaaattacaagagagaccattaagaaagatctagagattagtgagttgga 43423912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 456
Target Start/End: Original strand, 2544717 - 2544761
Alignment:
Q  412 cactagaggtaggggaagacctagaaaaactataagagaaactat 456  Q
    |||||||||||| |||||||||||||||||||| |||||||||||    
T  2544717 cactagaggtagaggaagacctagaaaaactatcagagaaactat 2544761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 426 - 486
Target Start/End: Complemental strand, 8203283 - 8203223
Alignment:
Q  426 gaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    |||||||||||||||||||||||||||||||||| |  ||||| || ||||||||| ||||    
T  8203283 gaagacctagaaaaactataagagaaactattaaaaaagatctagagattaatgagttgga 8203223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 480
Target Start/End: Original strand, 8796320 - 8796396
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatga 480  Q
    ||||| ||||||||||| || |||||||| | ||||||| ||||||||||||||||||  ||||| || ||||||||    
T  8796320 agtcagatcactagaggcagaggaagaccaataaaaactttaagagaaactattaagaaagatctagatattaatga 8796396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 426 - 546
Target Start/End: Original strand, 29807989 - 29808109
Alignment:
Q  426 gaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacactatgacattgttt 525  Q
    |||||||||||||||||||||||||||| || |||| ||||||  | ||||| ||| || | ||| | || |||||||||| ||||||||| |    |||    
T  29807989 gaagacctagaaaaactataagagaaacgatcaagaaggatctaaatattaacgagttgaataaaaatatggtttttgataaaacactatggcgacattt 29808088  T
Q  526 gatccatgtagccgatcccac 546  Q
    ||| |||||||||||| ||||    
T  29808089 gattcatgtagccgattccac 29808109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 456
Target Start/End: Original strand, 44008690 - 44008742
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactat 456  Q
    ||||||||||||||||| || |||||||||||||||| | |||||||||||||    
T  44008690 agtcaaatcactagaggcagaggaagacctagaaaaaatctaagagaaactat 44008742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 406 - 461
Target Start/End: Complemental strand, 3819025 - 3818970
Alignment:
Q  406 tcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    ||||| ||||||||  || ||||||||| |||||||||||||||||||||||||||    
T  3819025 tcaaaccactagagaaagaggaagaccttgaaaaactataagagaaactattaaga 3818970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 458
Target Start/End: Original strand, 8628153 - 8628195
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    |||||||| |||||||||||||||||||||| |||||||||||    
T  8628153 agaggtagaggaagacctagaaaaactataacagaaactatta 8628195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 458
Target Start/End: Original strand, 9509441 - 9509483
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    |||||||| |||||||||||||||||||||||| |||||||||    
T  9509441 agaggtagaggaagacctagaaaaactataagataaactatta 9509483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 458
Target Start/End: Complemental strand, 9599553 - 9599511
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    |||||||| ||||||||||||||||||| ||||||||||||||    
T  9599553 agaggtagaggaagacctagaaaaactacaagagaaactatta 9599511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 546
Target Start/End: Complemental strand, 28511972 - 28511830
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    ||||| ||||||||||| || | |||||||||||||||||| ||||||| || || ||  ||  |||| ||||||||| ||||  || |||| |||| ||    
T  28511972 agtcagatcactagaggcagagaaagacctagaaaaactattagagaaattactaggaaagacttggagattaatgagttggaccaaaacatggtttatg 28511873  T
Q  504 atataacactatgacattgtttgatccatgtagccgatcccac 546  Q
    ||| |||| |||| | |  ||||||| |||||||||| |||||    
T  28511872 atagaacattatggcgtaatttgatcaatgtagccgaccccac 28511830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 30396900 - 30396818
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    |||||||| |||||||||||||||||||   ||| ||| |||||||||||| |||||| |||||  || ||||||||| ||||    
T  30396900 agtcaaataactagaggtaggggaagacacggaacaaccataagagaaactgttaagaaggatccagagattaatgagttgga 30396818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 433 - 538
Target Start/End: Original strand, 30445251 - 30445350
Alignment:
Q  433 tagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacactatgacattgtttgatccat 532  Q
    ||||||||| |||||||||||||| ||||||||||| || ||||||||| ||      || || |||||||||| ||||| ||||| | ||||||| |||    
T  30445251 tagaaaaacgataagagaaactatcaagagggatctagagattaatgagttg------gatatggtttttgatagaacaccatgacgtcgtttgattcat 30445344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 458
Target Start/End: Complemental strand, 52073223 - 52073169
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    ||||||||||||||||| || |||||||||||||||||| |||  ||||||||||    
T  52073223 agtcaaatcactagaggcagaggaagacctagaaaaactttaattgaaactatta 52073169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 457
Target Start/End: Original strand, 17815590 - 17815643
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatt 457  Q
    |||||||||| | |||| | ||||||||||||||||| ||||||||||||||||    
T  17815590 agtcaaatcattggaggcaagggaagacctagaaaaattataagagaaactatt 17815643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 425 - 458
Target Start/End: Complemental strand, 34827254 - 34827221
Alignment:
Q  425 ggaagacctagaaaaactataagagaaactatta 458  Q
    ||||||||||||||||||||||||||||||||||    
T  34827254 ggaagacctagaaaaactataagagaaactatta 34827221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 416 - 461
Target Start/End: Complemental strand, 48431565 - 48431520
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    |||||||| |||||||| | ||||||||||||||||||||||||||    
T  48431565 agaggtagaggaagacccaaaaaaactataagagaaactattaaga 48431520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 449
Target Start/End: Original strand, 49377435 - 49377480
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagag 449  Q
    ||||||||||||||||| || |||||||||||||||||||| ||||    
T  49377435 agtcaaatcactagaggcagaggaagacctagaaaaactattagag 49377480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 454
Target Start/End: Original strand, 6641216 - 6641272
Alignment:
Q  398 gaggtaagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaact 454  Q
    |||| |||||||||||||||||||  ||| ||||||||| ||||||||||| |||||    
T  6641216 gagggaagtcaaatcactagaggtgtgggtagacctagacaaactataagaaaaact 6641272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 486
Target Start/End: Original strand, 40416504 - 40416564
Alignment:
Q  426 gaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    ||||||||||||||||||||||| ||||||||||||  |||||  | ||||||||| ||||    
T  40416504 gaagacctagaaaaactataagacaaactattaagaaagatctatagattaatgagttgga 40416564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 458
Target Start/End: Original strand, 26299208 - 26299250
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    |||||||| |||| |||||| ||||||||||||||||||||||    
T  26299208 agaggtagaggaaaacctaggaaaactataagagaaactatta 26299250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 458
Target Start/End: Original strand, 39318252 - 39318294
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    |||||||| ||||||||||| ||||||||||||||||| ||||    
T  39318252 agaggtagaggaagacctaggaaaactataagagaaaccatta 39318294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 454
Target Start/End: Complemental strand, 52561748 - 52561710
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaact 454  Q
    |||||||| ||||||| ||||||||||||||||||||||    
T  52561748 agaggtagaggaagacttagaaaaactataagagaaact 52561710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 458
Target Start/End: Complemental strand, 7762583 - 7762554
Alignment:
Q  429 gacctagaaaaactataagagaaactatta 458  Q
    ||||||||||||||||||||||||||||||    
T  7762583 gacctagaaaaactataagagaaactatta 7762554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 459
Target Start/End: Original strand, 26444477 - 26444530
Alignment:
Q  406 tcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaa 459  Q
    |||||| |||||| |||| |||||||| | ||||||||||||||||| ||||||    
T  26444477 tcaaattactagatgtagaggaagaccgacaaaaactataagagaaattattaa 26444530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 458
Target Start/End: Original strand, 29128919 - 29128948
Alignment:
Q  429 gacctagaaaaactataagagaaactatta 458  Q
    ||||||||||||||||||||||||||||||    
T  29128919 gacctagaaaaactataagagaaactatta 29128948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 458
Target Start/End: Original strand, 41560353 - 41560394
Alignment:
Q  417 gaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    |||||||  |||||||||||||| ||||||||||||||||||    
T  41560353 gaggtagaagaagacctagaaaagctataagagaaactatta 41560394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 444
Target Start/End: Complemental strand, 13827741 - 13827701
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactat 444  Q
    ||||| ||||||||||| || ||||||||||||||||||||    
T  13827741 agtcagatcactagaggcagaggaagacctagaaaaactat 13827701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 426 - 458
Target Start/End: Complemental strand, 40228155 - 40228123
Alignment:
Q  426 gaagacctagaaaaactataagagaaactatta 458  Q
    |||||||||||||||||||||| ||||||||||    
T  40228155 gaagacctagaaaaactataagtgaaactatta 40228123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 426 - 486
Target Start/End: Original strand, 46388509 - 46388569
Alignment:
Q  426 gaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    |||| |||||||||||||||||||||||| ||||||  ||||| || ||| ||||| ||||    
T  46388509 gaaggcctagaaaaactataagagaaacttttaagaatgatctagagattgatgagttgga 46388569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 426 - 486
Target Start/End: Original strand, 46394953 - 46395013
Alignment:
Q  426 gaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    |||| |||||||||||||||||||||||| ||||||  ||||| || ||| ||||| ||||    
T  46394953 gaaggcctagaaaaactataagagaaacttttaagaatgatctagagattgatgagttgga 46395013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 7e-38; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 404 - 540
Target Start/End: Complemental strand, 31961437 - 31961301
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||| || || |||||| ||||||||||||| ||| |||    
T  31961437 agtcaaatcactagaggtaggggtagacctagaaaaactataagagaaactattaggaaagatctagagataaatgagttggagaaagacatggttgttg 31961338  T
Q  504 atataacactatgacattgtttgatccatgtagccga 540  Q
    ||| ||||||||||| | ||||||| |||||||||||    
T  31961337 atagaacactatgacgtcgtttgattcatgtagccga 31961301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 404 - 538
Target Start/End: Complemental strand, 31897599 - 31897465
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||| || || |||||| ||||||||||||| ||| |||    
T  31897599 agtcagatcactagaggtaggggtagacctagaaaaactataagagaaactattaggaaggatctagagataaatgagttggagaaagacatggttgttg 31897500  T
Q  504 atataacactatgacattgtttgatccatgtagcc 538  Q
    ||| |||||||||||   ||||||| |||||||||    
T  31897499 atagaacactatgacgccgtttgattcatgtagcc 31897465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 410 - 512
Target Start/End: Original strand, 46372141 - 46372243
Alignment:
Q  410 atcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataa 509  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||| || || |||||| ||||||||||||| |||||||||| ||    
T  46372141 atcactagaggtaggggtagacctagaaaaactataagagaaactattaggaaggatctagagataaatgagttggagaaagacatggtttttgatagaa 46372240  T
Q  510 cac 512  Q
    |||    
T  46372241 cac 46372243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 411 - 540
Target Start/End: Complemental strand, 35555811 - 35555685
Alignment:
Q  411 tcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataac 510  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||   ||| || || |||||| ||||||||||||| ||||||||||  ||    
T  35555811 tcactagaggtaggggtagacctagaaaaactataagagaaactattaagag---tctagagataaatgagttggagaaagacatggtttttgatagtac 35555715  T
Q  511 actatgacattgtttgatccatgtagccga 540  Q
    | |||| | | ||||||| |||||||||||    
T  35555714 agtatggcgtcgtttgattcatgtagccga 35555685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 404 - 538
Target Start/End: Complemental strand, 42285872 - 42285740
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    ||||| |||||||||||| |||| |||||||||||| ||||||||  |||||||| || |||||| || || |||||| ||||||||||||| |||||||    
T  42285872 agtcagatcactagaggtgggggtagacctagaaaagctataaga--aactattaggaaggatctagagataaatgagttggagaaagacatggtttttg 42285775  T
Q  504 atataacactatgacattgtttgatccatgtagcc 538  Q
    ||| || |||||| ||||||||||| |||||||||    
T  42285774 atagaatactatggcattgtttgattcatgtagcc 42285740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 423 - 513
Target Start/End: Original strand, 10209166 - 10209256
Alignment:
Q  423 ggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacact 513  Q
    |||| |||||||||||||||||||||||||||||||||| |||||| || ||||||||| ||||||||||||| |||||||||| ||||||    
T  10209166 gggggagacctagaaaaactataagagaaactattaagaaggatctagagattaatgagttggagaaagacatggtttttgatagaacact 10209256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 404 - 481
Target Start/End: Original strand, 26356730 - 26356807
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgag 481  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||| || |||||||||    
T  26356730 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactgttatgaaggatctagagattaatgag 26356807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 426 - 546
Target Start/End: Original strand, 44360219 - 44360339
Alignment:
Q  426 gaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacactatgacattgttt 525  Q
    |||||| |||||||||||| ||||||||| | |||| |||||| ||    |||||| ||||||||||||  |||||||||| ||||||||||| | ||||    
T  44360219 gaagacttagaaaaactattagagaaactgtcaagaaggatcttgaggccaatgagttggagaaagacacggtttttgatagaacactatgacgtcgttt 44360318  T
Q  526 gatccatgtagccgatcccac 546  Q
    ||| ||||||||||| |||||    
T  44360319 gattcatgtagccgaccccac 44360339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 402 - 538
Target Start/End: Original strand, 53540399 - 53540535
Alignment:
Q  402 taagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttt 501  Q
    ||||||| ||||||||||| || |||||||||||||||||||||||| ||||||||| ||  ||  |||| ||||||||| |||| ||| | || ||||     
T  53540399 taagtcagatcactagaggcagaggaagacctagaaaaactataagataaactattaggaaagacttggagattaatgagttggacaaaaatatggttta 53540498  T
Q  502 tgatataacactatgacattgtttgatccatgtagcc 538  Q
    ||||| |||| |||| |||  |||||||||| |||||    
T  53540499 tgatagaacattatggcataatttgatccatatagcc 53540535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 404 - 546
Target Start/End: Complemental strand, 10775640 - 10775500
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    |||||||| |||| || ||| |||||||||| || |||||| |||||||| || |||| |||||| || |  |||||| ||||||||||||| |||||||    
T  10775640 agtcaaataactaaagatagaggaagacctaaaagaactattagagaaaccatcaagaaggatctagaaaacaatgagttggagaaagacatggtttttg 10775541  T
Q  504 atataacactatgacattgtttgatccatgtagccgatcccac 546  Q
    ||| |||||  ||||||||||||||  |||| ||||| |||||    
T  10775540 atagaacac--tgacattgtttgatttatgtcgccgaccccac 10775500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 408 - 537
Target Start/End: Original strand, 2589187 - 2589316
Alignment:
Q  408 aaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatat 507  Q
    |||| ||||||||||| | | ||||||||||||  |||||||||||||| |||| |||||| || ||||||||| ||||  || | || ||||||||||     
T  2589187 aaattactagaggtagagcacgacctagaaaaagcataagagaaactatcaagatggatctagagattaatgagttggatgaaaatatggtttttgatag 2589286  T
Q  508 aacactatgacattgtttgatccatgtagc 537  Q
    ||||||||| | | ||||||| ||||||||    
T  2589287 aacactatggcgtcgtttgattcatgtagc 2589316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 410 - 515
Target Start/End: Complemental strand, 6478848 - 6478743
Alignment:
Q  410 atcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataa 509  Q
    ||||| |||| |||||| |||||||||||||| | |||||||||||||| || |||||| ||  | |||||| | ||||||||||| |||||||||| ||    
T  6478848 atcaccagagctaggggtagacctagaaaaacgacaagagaaactattaggaaggatctagaggtaaatgagttagagaaagacatggtttttgatacaa 6478749  T
Q  510 cactat 515  Q
    ||||||    
T  6478748 cactat 6478743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 404 - 461
Target Start/End: Original strand, 49987519 - 49987576
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    |||||| |||||||||| || |||||||||||||||||||||||||||||||||||||    
T  49987519 agtcaattcactagaggcagaggaagacctagaaaaactataagagaaactattaaga 49987576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 410 - 535
Target Start/End: Original strand, 47147490 - 47147613
Alignment:
Q  410 atcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataa 509  Q
    ||||||||||| || |||||||||||||||||||||  ||||||||||||||  ||||| || ||||||||| ||  || ||| ||  | | ||||| ||    
T  47147490 atcactagaggcagaggaagacctagaaaaactatagaagaaactattaagaaagatctagagattaatgagttg--gatagatatgatatatgatagaa 47147587  T
Q  510 cactatgacattgtttgatccatgta 535  Q
    || |||| ||||||||||||||||||    
T  47147588 cattatggcattgtttgatccatgta 47147613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 398 - 458
Target Start/End: Original strand, 35690376 - 35690436
Alignment:
Q  398 gaggtaagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    |||| |||||| ||||  |||||||| ||||||||||||||||||||||||||||||||||    
T  35690376 gaggaaagtcagatcaaaagaggtagaggaagacctagaaaaactataagagaaactatta 35690436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 404 - 459
Target Start/End: Complemental strand, 1427455 - 1427400
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaa 459  Q
    ||||||||||||||||||||||||||| ||| ||||||||||| ||||||| ||||    
T  1427455 agtcaaatcactagaggtaggggaagatctataaaaactataaaagaaactcttaa 1427400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 415 - 486
Target Start/End: Complemental strand, 2557832 - 2557761
Alignment:
Q  415 tagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    ||||||||| |||||| ||||||||||| |||||||||||||||||| ||||||| | ||||| ||| ||||    
T  2557832 tagaggtagaggaagatctagaaaaactgtaagagaaactattaagaaggatctgaagattaacgagttgga 2557761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 42639191 - 42639109
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    |||||||||||||||||||| |||| | |||||||||||  |||||||||||||||||  ||||| |  ||||||||| ||||    
T  42639191 agtcaaatcactagaggtagaggaatatctagaaaaactgcaagagaaactattaagaaagatctagcgattaatgagttgga 42639109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 395 - 486
Target Start/End: Complemental strand, 49738726 - 49738639
Alignment:
Q  395 atagaggtaagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    |||||| | ||||||||||||||||| |    |||||||||||||||||||| | |||||||||||| |||||| || ||||||||| ||||    
T  49738726 atagagatgagtcaaatcactagaggca----aagacctagaaaaactataataaaaactattaagaaggatctagaaattaatgagttgga 49738639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 461
Target Start/End: Complemental strand, 7682081 - 7682024
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    ||||| ||||||||||| || ||||||||| |||||||||||||||||||||| ||||    
T  7682081 agtcacatcactagaggcagaggaagacctggaaaaactataagagaaactatcaaga 7682024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 409 - 486
Target Start/End: Original strand, 18966721 - 18966798
Alignment:
Q  409 aatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    |||||||||||||||  ||||||||| || |||||||||||||||||||||||  |||||  | |||| |||||||||    
T  18966721 aatcactagaggtagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagctgga 18966798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 481
Target Start/End: Complemental strand, 42293436 - 42293359
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgag 481  Q
    ||||||||||||||||| |  ||| || ||| ||||||||||||||||||||||||||  ||||| || |||||||||    
T  42293436 agtcaaatcactagaggcaaaggatgaactaaaaaaactataagagaaactattaagaaagatctagaaattaatgag 42293359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 476 - 540
Target Start/End: Original strand, 13262395 - 13262459
Alignment:
Q  476 aatgagctggagaaagacattgtttttgatataacactatgacattgtttgatccatgtagccga 540  Q
    |||||| ||||||||||||| |||||||||| || |||||||| | ||||||| |||||||||||    
T  13262395 aatgagttggagaaagacatggtttttgatagaaaactatgacgtcgtttgattcatgtagccga 13262459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 13805435 - 13805379
Alignment:
Q  405 gtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    |||| ||||||||||| || |||| ||||||||||||||||||||||||||| ||||    
T  13805435 gtcagatcactagaggcagaggaaaacctagaaaaactataagagaaactatgaaga 13805379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 461
Target Start/End: Complemental strand, 45569175 - 45569123
Alignment:
Q  409 aatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    |||||||||||| || |||||||||||||| | ||||||||||||||||||||    
T  45569175 aatcactagaggcagaggaagacctagaaacattataagagaaactattaaga 45569123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 408 - 480
Target Start/End: Original strand, 48033200 - 48033272
Alignment:
Q  408 aaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatga 480  Q
    ||||||||||||| || ||||||| ||  |||||||||||||||||||||||||   ||||||| ||||||||    
T  48033200 aaatcactagaggcagaggaagacttaagaaaactataagagaaactattaagaaatatctggaaattaatga 48033272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 426 - 461
Target Start/End: Complemental strand, 8599090 - 8599055
Alignment:
Q  426 gaagacctagaaaaactataagagaaactattaaga 461  Q
    ||||||||||||||||||||||||||||||||||||    
T  8599090 gaagacctagaaaaactataagagaaactattaaga 8599055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 458
Target Start/End: Original strand, 21107103 - 21107157
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    ||||| |||||| || | || ||||||||||||||||||||||||||||||||||    
T  21107103 agtcagatcactggatgcagcggaagacctagaaaaactataagagaaactatta 21107157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 21945809 - 21945727
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    ||||| |||||||||||  | |||||||||||||||||||| | ||||||||||| ||  ||| |||| ||||||||| ||||    
T  21945809 agtcacatcactagaggctgaggaagacctagaaaaactatcatagaaactattaggaaagatttggaaattaatgagttgga 21945727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 458
Target Start/End: Original strand, 28351682 - 28351724
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    |||||||| | ||||||||||||||||||||||||||||||||    
T  28351682 agaggtagagaaagacctagaaaaactataagagaaactatta 28351724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 478
Target Start/End: Original strand, 37488226 - 37488276
Alignment:
Q  428 agacctagaaaaactataagagaaactattaagagggatctggacattaat 478  Q
    ||||||||||||||||||||||||||||||||||  ||||| || ||||||    
T  37488226 agacctagaaaaactataagagaaactattaagaaagatctagaaattaat 37488276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 458
Target Start/End: Complemental strand, 45204998 - 45204956
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    |||||| | ||||||||||||||||||||||||||||||||||    
T  45204998 agaggtggaggaagacctagaaaaactataagagaaactatta 45204956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 461
Target Start/End: Complemental strand, 8459206 - 8459149
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    ||||||||||||| ||| || |||||||||| |||||||| |||| ||||||||||||    
T  8459206 agtcaaatcactaaaggcagaggaagacctaaaaaaactaaaagataaactattaaga 8459149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 445
Target Start/End: Original strand, 11389835 - 11389876
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactata 445  Q
    |||||||||||||||||||| ||||||| |||||||||||||    
T  11389835 agtcaaatcactagaggtagaggaagacgtagaaaaactata 11389876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 461
Target Start/End: Original strand, 42566350 - 42566407
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    ||||| |||||||||||| | |||| ||||| |||||||| |||||||||||||||||    
T  42566350 agtcatatcactagaggttgaggaatacctaaaaaaactacaagagaaactattaaga 42566407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 417 - 454
Target Start/End: Complemental strand, 55809148 - 55809111
Alignment:
Q  417 gaggtaggggaagacctagaaaaactataagagaaact 454  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  55809148 gaggtagaggaagacctagaaaaactataagagaaact 55809111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 405 - 457
Target Start/End: Complemental strand, 34233194 - 34233142
Alignment:
Q  405 gtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatt 457  Q
    |||| ||||||||||| || |||| ||||||||||||||| ||||||||||||    
T  34233194 gtcagatcactagaggcagaggaaaacctagaaaaactatcagagaaactatt 34233142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 45184302 - 45184258
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataaga 448  Q
    |||| |||||| |||||||| ||||||||||||||||||||||||    
T  45184302 agtctaatcacaagaggtagaggaagacctagaaaaactataaga 45184258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 486
Target Start/End: Original strand, 50680857 - 50680933
Alignment:
Q  410 atcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    ||||||| ||| || || ||||||||||||||||||||||||| |||| |||  ||||| || ||||||||| ||||    
T  50680857 atcactataggcagaggtagacctagaaaaactataagagaaattatttagaaagatctagagattaatgagttgga 50680933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 461
Target Start/End: Complemental strand, 51252619 - 51252567
Alignment:
Q  409 aatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    ||||||||||||||| ||||||  |||||||||| ||| ||||||||||||||    
T  51252619 aatcactagaggtagaggaagagatagaaaaactgtaaaagaaactattaaga 51252567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 456
Target Start/End: Original strand, 53517641 - 53517693
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactat 456  Q
    ||||| ||||||||||| || ||||||| |||||||||| |||||||||||||    
T  53517641 agtcagatcactagaggcagaggaagacttagaaaaactgtaagagaaactat 53517693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 502 - 542
Target Start/End: Original strand, 55771719 - 55771759
Alignment:
Q  502 tgatataacactatgacattgtttgatccatgtagccgatc 542  Q
    |||||||||| ||||||||| ||||||||||||||||||||    
T  55771719 tgatataacattatgacattttttgatccatgtagccgatc 55771759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 457
Target Start/End: Complemental strand, 55805829 - 55805789
Alignment:
Q  417 gaggtaggggaagacctagaaaaactataagagaaactatt 457  Q
    ||||||| ||||||||| |||||||||||||||||||||||    
T  55805829 gaggtagtggaagacctggaaaaactataagagaaactatt 55805789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 502 - 542
Target Start/End: Original strand, 55835955 - 55835995
Alignment:
Q  502 tgatataacactatgacattgtttgatccatgtagccgatc 542  Q
    |||||||||| ||||||||| ||||||||||||||||||||    
T  55835955 tgatataacattatgacattttttgatccatgtagccgatc 55835995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 486
Target Start/End: Complemental strand, 934598 - 934520
Alignment:
Q  407 caaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    |||| ||||||||| || ||||||| |||||||||||| ||||||||||||||||  | ||| || ||||||||| ||||    
T  934598 caaaacactagaggcagaggaagac-tagaaaaactattagagaaactattaagaaagttctagagattaatgagttgga 934520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 442
Target Start/End: Original strand, 29398920 - 29398967
Alignment:
Q  395 atagaggtaagtcaaatcactagaggtaggggaagacctagaaaaact 442  Q
    |||||||  ||||||||||||||||| || ||||||||||||||||||    
T  29398920 atagaggatagtcaaatcactagaggcagaggaagacctagaaaaact 29398967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 15662029 - 15661971
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagag 462  Q
    ||||| |||||||||| ||| || |||| | |||||||||||||||||| |||||||||    
T  15662029 agtcagatcactagagatagaggtagacttcgaaaaactataagagaaaatattaagag 15661971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 458
Target Start/End: Original strand, 30853454 - 30853508
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    ||||||||||| ||||| |  || |||| ||||||||||||||||||||||||||    
T  30853454 agtcaaatcacaagaggcaaagggagacttagaaaaactataagagaaactatta 30853508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 451
Target Start/End: Original strand, 31339651 - 31339693
Alignment:
Q  409 aatcactagaggtaggggaagacctagaaaaactataagagaa 451  Q
    |||||||||||| || ||||||||||||||||||||| |||||    
T  31339651 aatcactagaggcagaggaagacctagaaaaactatatgagaa 31339693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 458
Target Start/End: Complemental strand, 31959973 - 31959931
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    |||||||| ||||||||||| |||||||| |||||||||||||    
T  31959973 agaggtagaggaagacctaggaaaactattagagaaactatta 31959931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 538
Target Start/End: Complemental strand, 38903888 - 38903755
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    ||||||||  ||||||| ||  |||||||||||||| |||||||||||||||||||||  || ||  | ||||||||| | || | ||| ||  | | ||    
T  38903888 agtcaaatggctagaggcagatgaagacctagaaaa-ctataagagaaactattaagaaagacctaaagattaatgagtttgatagagatatgatatatg 38903790  T
Q  504 atataacactatgacattgtttgatccatgtagcc 538  Q
    | |||||| |||| ||| |||||||||||||||||    
T  38903789 acataacattatggcatcgtttgatccatgtagcc 38903755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 458
Target Start/End: Original strand, 39708556 - 39708598
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    |||||||| ||||||||||| ||||||||||||||||| ||||    
T  39708556 agaggtagaggaagacctaggaaaactataagagaaaccatta 39708598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 458
Target Start/End: Original strand, 44860944 - 44860998
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    ||||||| ||||||||| |  ||||||||| ||||||||||||| ||||||||||    
T  44860944 agtcaaaacactagaggcaaaggaagaccttgaaaaactataagggaaactatta 44860998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 458
Target Start/End: Original strand, 51421853 - 51421895
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    |||||||| ||||||  ||||||||||||||||||||||||||    
T  51421853 agaggtagaggaagatttagaaaaactataagagaaactatta 51421895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 454
Target Start/End: Original strand, 55028927 - 55028977
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaact 454  Q
    ||||||||||||||||| |  ||||||  ||||||||||||||||||||||    
T  55028927 agtcaaatcactagaggcataggaagagttagaaaaactataagagaaact 55028977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 546
Target Start/End: Original strand, 17900620 - 17900733
Alignment:
Q  433 tagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacactatgacattgtttgatccat 532  Q
    |||||||||| ||||||||||||| | ||  ||| | || || |||||| || |||||||||| |||||| ||| | ||||||| | ||||||||| |||    
T  17900620 tagaaaaactttaagagaaactatcaggaaagatatagagataaatgagttgtagaaagacatggtttttaatagagcactatggcgttgtttgattcat 17900719  T
Q  533 gtagccgatcccac 546  Q
     |||| || |||||    
T  17900720 ttagctgaccccac 17900733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 444
Target Start/End: Complemental strand, 25257749 - 25257713
Alignment:
Q  407 caaatcactagaggtaggggaagacctagaaaaactat 444  Q
    |||||||||||||||||||||||||||| |||||||||    
T  25257749 caaatcactagaggtaggggaagaccta-aaaaactat 25257713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 461
Target Start/End: Complemental strand, 33225984 - 33225947
Alignment:
Q  424 gggaagacctagaaaaactataagagaaactattaaga 461  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  33225984 gggatgacctagaaaaattataagagaaactattaaga 33225947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 461
Target Start/End: Complemental strand, 44667416 - 44667359
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    ||||||||||||||||| ||  |||||||| |||||||||||  ||||||||| ||||    
T  44667416 agtcaaatcactagaggcagaagaagacctcgaaaaactatattagaaactatcaaga 44667359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 461
Target Start/End: Complemental strand, 44719531 - 44719478
Alignment:
Q  408 aaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    |||||| ||||||  | |||||||||||||||| ||||| ||||||||||||||    
T  44719531 aaatcattagaggctgaggaagacctagaaaaaatataaaagaaactattaaga 44719478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 461
Target Start/End: Complemental strand, 51009278 - 51009225
Alignment:
Q  408 aaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    ||||||||||| || | |||||||| ||||||||| |||| |||||||||||||    
T  51009278 aaatcactagacgtggaggaagaccgagaaaaactttaagggaaactattaaga 51009225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 457
Target Start/End: Original strand, 55579143 - 55579196
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatt 457  Q
    ||||||||||  ||||||||  ||||||||||||||||||||| | ||||||||    
T  55579143 agtcaaatcaaaagaggtagaagaagacctagaaaaactataaaataaactatt 55579196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 498 - 546
Target Start/End: Complemental strand, 883437 - 883389
Alignment:
Q  498 tttttgatataacactatgacattgtttgatccatgtagccgatcccac 546  Q
    ||||||||| |||||||||||||  ||| |||||||||||||| |||||    
T  883437 tttttgatagaacactatgacatcatttaatccatgtagccgaccccac 883389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 502 - 546
Target Start/End: Original strand, 6957807 - 6957851
Alignment:
Q  502 tgatataacactatgacattgtttgatccatgtagccgatcccac 546  Q
    ||||| ||||||||||| |  ||||||||||||||||||||||||    
T  6957807 tgatagaacactatgacgtcatttgatccatgtagccgatcccac 6957851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 425 - 461
Target Start/End: Original strand, 20999132 - 20999168
Alignment:
Q  425 ggaagacctagaaaaactataagagaaactattaaga 461  Q
    |||||||||||||||||||||| | ||||||||||||    
T  20999132 ggaagacctagaaaaactataatataaactattaaga 20999168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 433 - 461
Target Start/End: Complemental strand, 21214728 - 21214700
Alignment:
Q  433 tagaaaaactataagagaaactattaaga 461  Q
    |||||||||||||||||||||||||||||    
T  21214728 tagaaaaactataagagaaactattaaga 21214700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 502 - 546
Target Start/End: Original strand, 33227418 - 33227462
Alignment:
Q  502 tgatataacactatgacattgtttgatccatgtagccgatcccac 546  Q
    ||||| ||||||||||| |  ||||||||||||||||||||||||    
T  33227418 tgatagaacactatgacgtcatttgatccatgtagccgatcccac 33227462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 1e-36; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 404 - 546
Target Start/End: Complemental strand, 44437892 - 44437750
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    ||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||| || || |||||| |||||||| |||| |||||||    
T  44437892 agtcagatcactagaggtaggggtagacctagaaaaactatatgagaaactattaagaaggatctagagataaatgagttggagaaaaacatggtttttg 44437793  T
Q  504 atataacactatgacattgtttgatccatgtagccgatcccac 546  Q
    ||| ||||||||| | |||||| || ||||||||||| |||||    
T  44437792 atagaacactatggcgttgtttaattcatgtagccgaccccac 44437750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 410 - 546
Target Start/End: Complemental strand, 12489967 - 12489831
Alignment:
Q  410 atcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataa 509  Q
    ||||||||| ||||||| |||||||||||||||||| |||||||||||| || |||||| || || |||||| ||||||||||||| |||||||||||||    
T  12489967 atcactagaagtaggggtagacctagaaaaactatatgagaaactattaggaaggatctagagataaatgagttggagaaagacatggtttttgatataa 12489868  T
Q  510 cactatgacattgtttgatccatgtagccgatcccac 546  Q
    |||| || | | ||||||| ||||||||||| |||||    
T  12489867 cactttggcgtcgtttgattcatgtagccgaccccac 12489831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 404 - 539
Target Start/End: Original strand, 42543346 - 42543481
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||| || || |||||| ||||||||||| |  ||||||    
T  42543346 agtcagatcactagaggtaggggtagacctagaaaaactataagagaaactattaggaaggatctagagataaatgagttggagaaagacgtgctttttg 42543445  T
Q  504 atataacactatgacattgtttgatccatgtagccg 539  Q
    ||| ||| ||||| | ||||||||| ||||||||||    
T  42543446 atagaacgctatggcgttgtttgattcatgtagccg 42543481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 406 - 516
Target Start/End: Complemental strand, 5759164 - 5759054
Alignment:
Q  406 tcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgat 505  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||||||  |||| |||||| || || |||||| ||||||||||||| |||||||||    
T  5759164 tcaaatcactagaggtagggaaatacctagaaaaactattagagaaactaccaagaaggatctagagatcaatgagttggagaaagacatggtttttgat 5759065  T
Q  506 ataacactatg 516  Q
    | |||||||||    
T  5759064 agaacactatg 5759054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 411 - 546
Target Start/End: Complemental strand, 4598726 - 4598591
Alignment:
Q  411 tcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataac 510  Q
    ||||||||||||| || | |||||||||||||||| ||||| |||||| || |||||| || || |||||| ||||||||||||| | |||||||| |||    
T  4598726 tcactagaggtagtggtaaacctagaaaaactatacgagaagctattaggaaggatctagagataaatgagttggagaaagacatagattttgatagaac 4598627  T
Q  511 actatgacattgtttgatccatgtagccgatcccac 546  Q
    |||||| | |  |||||| |||||| ||||| ||||    
T  4598626 actatggcgtcatttgattcatgtaaccgattccac 4598591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 404 - 480
Target Start/End: Complemental strand, 19235155 - 19235079
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatga 480  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||  ||||| || ||||||||    
T  19235155 agtcaaatcactagagatagaggaagacctagaaaaactataagagaaactattgagaaagatctagagattaatga 19235079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 404 - 461
Target Start/End: Complemental strand, 26784511 - 26784454
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    ||||||||||||||||| || | |||||||||||||||||||||||||||||||||||    
T  26784511 agtcaaatcactagaggcagagaaagacctagaaaaactataagagaaactattaaga 26784454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 425 - 538
Target Start/End: Original strand, 33287553 - 33287666
Alignment:
Q  425 ggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacactatgacattgtt 524  Q
    |||||||||||||||||||||||||||||||||||||  ||||| || ||||||||| | ||   | | || |||| ||||| |||| |||||||| |||    
T  33287553 ggaagacctagaaaaactataagagaaactattaagaaagatctagaaattaatgagttagatcgaaatatggtttatgatagaacattatgacatagtt 33287652  T
Q  525 tgatccatgtagcc 538  Q
    |||||| |||||||    
T  33287653 tgatccttgtagcc 33287666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 406 - 486
Target Start/End: Original strand, 43832211 - 43832291
Alignment:
Q  406 tcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    |||||||| |||| | || |||||||||| | |||||||||||||||||||||||| |||||| || ||||||||| ||||    
T  43832211 tcaaatcagtagacgcagaggaagacctaaacaaactataagagaaactattaagaaggatctagagattaatgagttgga 43832291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 404 - 479
Target Start/End: Original strand, 38435063 - 38435138
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatg 479  Q
    ||||| ||||||||||| || || |||||||||||||||| |||||||||||||||||  ||||| || |||||||    
T  38435063 agtcagatcactagaggcagaggtagacctagaaaaactacaagagaaactattaagaaagatctagagattaatg 38435138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 404 - 486
Target Start/End: Original strand, 18188863 - 18188945
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    ||||||||||||||||| |  || |||| |||||||| |||||||||||||||| |||  ||||| || ||||||||||||||    
T  18188863 agtcaaatcactagaggcaaagggagacttagaaaaattataagagaaactattcagaaagatctagagattaatgagctgga 18188945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 37470304 - 37470222
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    ||||| |||||||| ||||| |||||||||  ||||||||||||||||||||||| ||  ||||| || ||||||||| ||||    
T  37470304 agtcagatcactagtggtagaggaagacctgaaaaaactataagagaaactattaggacagatctagagattaatgagttgga 37470222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 486
Target Start/End: Original strand, 26670888 - 26670961
Alignment:
Q  413 actagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    ||||||||||| |||||||||| ||||||||||| ||||||||||||||  ||| | || ||||||||| ||||    
T  26670888 actagaggtagaggaagacctacaaaaactataaaagaaactattaagaaagatttagagattaatgagttgga 26670961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 461
Target Start/End: Original strand, 33504334 - 33504391
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    ||||| ||||||||||| || | || ||||||||||||||||||||||||||||||||    
T  33504334 agtcagatcactagaggcagagaaaaacctagaaaaactataagagaaactattaaga 33504391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 458
Target Start/End: Original strand, 12141655 - 12141709
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    |||||||| || |||||||| ||||||||||||||| ||||| ||||||||||||    
T  12141655 agtcaaattacaagaggtagaggaagacctagaaaagctataggagaaactatta 12141709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 545
Target Start/End: Complemental strand, 12471009 - 12470927
Alignment:
Q  463 ggatctggacattaatgagctggagaaagacattgtttttgatataacactatgacattgtttgatccatgtagccgatccca 545  Q
    |||||| || || |||||| ||||||||||||| |||||||||||| ||||||| | | ||||| | ||||||||||| ||||    
T  12471009 ggatctagagataaatgagttggagaaagacatggtttttgatatatcactatggcgtcgtttgcttcatgtagccgacccca 12470927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 487 - 541
Target Start/End: Original strand, 15025688 - 15025742
Alignment:
Q  487 gaaagacattgtttttgatataacactatgacattgtttgatccatgtagccgat 541  Q
    ||||||||| |||||||||| ||||||||| ||| ||||||| ||||||||||||    
T  15025688 gaaagacatagtttttgatagaacactatggcatcgtttgattcatgtagccgat 15025742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 450 - 540
Target Start/End: Complemental strand, 20129726 - 20129636
Alignment:
Q  450 aaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacactatgacattgtttgatccatgtagccga 540  Q
    ||||||| |||| | |||| || ||||||||  |||||||| |||| ||| || ||||||||||||||| | ||||||| |||||||||||    
T  20129726 aaactatcaagaagaatctagagattaatgaattggagaaatacatggttgttaatataacactatgacgtcgtttgattcatgtagccga 20129636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 458
Target Start/End: Complemental strand, 45543231 - 45543189
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    |||||||| ||||||||| ||||||||||||||||||||||||    
T  45543231 agaggtagaggaagacctggaaaaactataagagaaactatta 45543189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 436 - 516
Target Start/End: Complemental strand, 28960351 - 28960270
Alignment:
Q  436 aaaaactat-aagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacactatg 516  Q
    ||||||||| |||||||||| |||||| |||||| || || |||||| |||||||||| || |||||||||| | |||||||    
T  28960351 aaaaactattaagagaaactgttaagaaggatctagagataaatgagttggagaaagatatggtttttgatagagcactatg 28960270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 425 - 486
Target Start/End: Complemental strand, 43752097 - 43752036
Alignment:
Q  425 ggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    |||||||||||||||||||| ||||||||||||| ||  ||| |||| ||||||||| ||||    
T  43752097 ggaagacctagaaaaactatcagagaaactattaggaaagatttggaaattaatgagttgga 43752036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 456
Target Start/End: Original strand, 4481599 - 4481651
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactat 456  Q
    ||||||| | |||||||| | |||||||||||||||| |||||||||||||||    
T  4481599 agtcaaaccgctagaggtggaggaagacctagaaaaattataagagaaactat 4481651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 481
Target Start/End: Complemental strand, 7432039 - 7431983
Alignment:
Q  425 ggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgag 481  Q
    |||| |||||||||||||||  ||||||||||||||| |||||| || |||||||||    
T  7432039 ggaaaacctagaaaaactattggagaaactattaagaaggatctagagattaatgag 7431983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 452
Target Start/End: Complemental strand, 23714432 - 23714384
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaa 452  Q
    ||||||||||||||| ||||  |||||| ||||||||||||||||||||    
T  23714432 agtcaaatcactagacgtagatgaagacttagaaaaactataagagaaa 23714384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 452
Target Start/End: Complemental strand, 24102104 - 24102056
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaa 452  Q
    ||||||||||||||| ||||  |||||| ||||||||||||||||||||    
T  24102104 agtcaaatcactagacgtagatgaagacttagaaaaactataagagaaa 24102056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 511
Target Start/End: Complemental strand, 9556540 - 9556433
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    |||||||  |||||||| |  ||||||||| |||||||||||||| ||||||||||||  ||||| |  ||||||||| ||||  |||| || |||| ||    
T  9556540 agtcaaactactagaggcaaaggaagaccttgaaaaactataagataaactattaagaaagatctagtgattaatgagttggatcaagatatggtttatg 9556441  T
Q  504 atataaca 511  Q
    ||| ||||    
T  9556440 atagaaca 9556433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 466
Target Start/End: Original strand, 36869976 - 36870031
Alignment:
Q  411 tcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggat 466  Q
    |||||||||| |  |||||| |||||||||||||||||||||||| ||||| ||||    
T  36869976 tcactagaggcataggaagagctagaaaaactataagagaaactaataagaaggat 36870031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 461
Target Start/End: Complemental strand, 37481782 - 37481731
Alignment:
Q  410 atcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    |||||| |||||||  ||||||| ||||||||||| ||||||||||||||||    
T  37481782 atcactggaggtagatgaagaccaagaaaaactattagagaaactattaaga 37481731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 427 - 481
Target Start/End: Complemental strand, 12026153 - 12026099
Alignment:
Q  427 aagacctagaaaaactataagagaaactattaagagggatctggacattaatgag 481  Q
    |||||||||| |||||||| |||||||||||||||  ||||| || |||||||||    
T  12026153 aagacctagagaaactataggagaaactattaagaaagatctagagattaatgag 12026099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 546
Target Start/End: Original strand, 18959034 - 18959164
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacactat 515  Q
    ||||| || ||||||||||||||||||| |||||||||||| | ||  ||  |||| ||||||||| ||||  || | || || | ||||| |||| |||    
T  18959034 agaggcagaggaagacctagaaaaactacaagagaaactataaggaaagacttggagattaatgagttggatcaaaatatggtctatgatagaacattat 18959133  T
Q  516 gacattgtttgatccatgtagccgatcccac 546  Q
    | |||  ||||||||||||||| || |||||    
T  18959134 ggcataatttgatccatgtagctgaccccac 18959164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 486
Target Start/End: Original strand, 19024289 - 19024371
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    |||||||||| ||||||||  ||||| | ||||| ||| |||||||||||||||||||  |||||  | ||||||||| ||||    
T  19024289 agtcaaatcattagaggtataggaaggcgtagaagaaccataagagaaactattaagaaagatctaaagattaatgagttgga 19024371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 486 - 540
Target Start/End: Complemental strand, 19334241 - 19334187
Alignment:
Q  486 agaaagacattgtttttgatataacactatgacattgtttgatccatgtagccga 540  Q
    |||||||||| |||||||||| ||||||||||| |  |||||| |||||||||||    
T  19334241 agaaagacatggtttttgatagaacactatgacgtcatttgattcatgtagccga 19334187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 486
Target Start/End: Original strand, 19855585 - 19855655
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    ||||| || |||||||||||| ||||||||| ||||||||||||||  ||||  ||  |||||||||||||    
T  19855585 agaggcagaggaagacctagataaactataaaagaaactattaagaaagatccagaggttaatgagctgga 19855655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 405 - 459
Target Start/End: Original strand, 32754798 - 32754852
Alignment:
Q  405 gtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaa 459  Q
    |||||||||||||||| || ||||||||||||  | |||||||||||| ||||||    
T  32754798 gtcaaatcactagagggagaggaagacctagagtagctataagagaaagtattaa 32754852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 468
Target Start/End: Original strand, 786923 - 786996
Alignment:
Q  395 atagaggtaagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatct 468  Q
    |||||||  ||| |||||| |||| |||||||||||  || |||||| |||||||||||||| |||| ||||||    
T  786923 atagaggggagttaaatcaatagatgtaggggaagatataaaaaaaccataagagaaactatcaagaaggatct 786996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 1626314 - 1626383
Alignment:
Q  412 cactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgag 481  Q
    |||||||||||| | ||| |||| ||  ||||||||||||||||||||||  ||||| || |||||||||    
T  1626314 cactagaggtagagtaaggcctaaaattactataagagaaactattaagaaagatctagagattaatgag 1626383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 461
Target Start/End: Complemental strand, 29548808 - 29548751
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    ||||||||||| ||| | || |||||||||  ||||||||||||||||| ||||||||    
T  29548808 agtcaaatcacgagaagcagaggaagacctgaaaaaactataagagaaattattaaga 29548751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 461
Target Start/End: Complemental strand, 37452397 - 37452340
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    ||||| ||||| ||||| || |||||||||||||||| |||||||| | |||||||||    
T  37452397 agtcagatcacaagaggaagaggaagacctagaaaaattataagaggagctattaaga 37452340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 413 - 528
Target Start/End: Original strand, 2807565 - 2807678
Alignment:
Q  413 actagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacac 512  Q
    ||||||| ||| | |||| ||||||||| ||||||||||| ||| |||| |||||  || ||||||||  | |||||| ||||    ||||||| |||||    
T  2807565 actagagatagagaaagatctagaaaaattataagagaaattatcaagaaggatccagagattaatgaattcgagaaatacat--gatttgatagaacac 2807662  T
Q  513 tatgacattgtttgat 528  Q
    |||||||| |||||||    
T  2807663 tatgacatcgtttgat 2807678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 502 - 546
Target Start/End: Original strand, 3866281 - 3866325
Alignment:
Q  502 tgatataacactatgacattgtttgatccatgtagccgatcccac 546  Q
    ||||| |||||||||||||  |||||||||||||||||| |||||    
T  3866281 tgatagaacactatgacatcatttgatccatgtagccgaccccac 3866325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 456
Target Start/End: Complemental strand, 13592457 - 13592417
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactat 456  Q
    |||||||  ||||||||||||| ||||||||||||||||||    
T  13592457 agaggtataggaagacctagaagaactataagagaaactat 13592417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 438 - 546
Target Start/End: Complemental strand, 23915830 - 23915722
Alignment:
Q  438 aaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacactatgacattgtttgatccatgtagc 537  Q
    ||||||||||||||||||||||||   |||| || ||||||||| |||| | |   || |||| ||||| ||||||||| | |  ||||||||||| |||    
T  23915830 aaactataagagaaactattaagaaaaatctagagattaatgaggtggacagaactatggtttatgatagaacactatggcgtaatttgatccatgcagc 23915731  T
Q  538 cgatcccac 546  Q
    ||| |||||    
T  23915730 cgaccccac 23915722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 398 - 458
Target Start/End: Complemental strand, 35755426 - 35755366
Alignment:
Q  398 gaggtaagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    |||| |||||| ||||  ||||| || ||||| |||||||||||||||| |||||||||||    
T  35755426 gaggaaagtcatatcaaaagagggagaggaaggcctagaaaaactataacagaaactatta 35755366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 453
Target Start/End: Complemental strand, 43573287 - 43573251
Alignment:
Q  417 gaggtaggggaagacctagaaaaactataagagaaac 453  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  43573287 gaggtagaggaagacctagaaaaactataagaaaaac 43573251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 4e-36; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 405 - 538
Target Start/End: Original strand, 33667547 - 33667680
Alignment:
Q  405 gtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttga 504  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||  |||||||| |||||| || ||||||||| ||||||||||||| ||||||||    
T  33667547 gtcaaatcactagatgtaggggaagacctagaaaaactataagagaagttattaagaaggatctagagattaatgagttggagaaagacatggtttttga 33667646  T
Q  505 tataacactatgacattgtttgatccatgtagcc 538  Q
    || |||||| || | ||||||||| | |||||||    
T  33667647 tagaacactttggcgttgtttgattcgtgtagcc 33667680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 404 - 540
Target Start/End: Original strand, 1525755 - 1525891
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    ||||| ||||||||||||||||| |||||||||||||||| |||||||||||||| || |||||  || || |||||| ||||||||||||| |||||||    
T  1525755 agtcagatcactagaggtaggggtagacctagaaaaactacaagagaaactattaggaaggatccagagataaatgagttggagaaagacatggtttttg 1525854  T
Q  504 atataacactatgacattgtttgatccatgtagccga 540  Q
    ||| ||| ||||| | ||||||||| |||||||||||    
T  1525855 atagaacgctatggcgttgtttgattcatgtagccga 1525891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 404 - 546
Target Start/End: Original strand, 2713055 - 2713189
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||| || || |||||| ||||||||||||        |    
T  2713055 agtcaaatcactagagtcaggggaagacctagaaaaactataagagaaactattaagaaggatctagagatgaatgagttggagaaagaca--------g 2713146  T
Q  504 atataacactatgacattgtttgatccatgtagccgatcccac 546  Q
    ||| ||||||||| ||| ||||||| ||||||||||| |||||    
T  2713147 atagaacactatggcatcgtttgattcatgtagccgagcccac 2713189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 404 - 537
Target Start/End: Complemental strand, 10082916 - 10082783
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    ||||||||||| |||| ||||| ||||||||||||||||||||||||||||| ||| | |||||| || ||||||||| ||||||||||||| |||||||    
T  10082916 agtcaaatcaccagagatagggtaagacctagaaaaactataagagaaactagtaacaaggatctagagattaatgagttggagaaagacatggtttttg 10082817  T
Q  504 atataacactatgacattgtttgatccatgtagc 537  Q
     ||  |||||||||| | || |||| ||||||||    
T  10082816 ttaacacactatgacgtcgtctgattcatgtagc 10082783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 404 - 536
Target Start/End: Complemental strand, 11002592 - 11002460
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    ||||| |||||||||||| |||| ||||||||||||||||||||| |||||||||  |  ||||| || || |||||| ||||||||| ||| |||||||    
T  11002592 agtcagatcactagaggttggggtagacctagaaaaactataagacaaactattagtaacgatctagagataaatgagttggagaaaggcatagtttttg 11002493  T
Q  504 atataacactatgacattgtttgatccatgtag 536  Q
    ||| ||||||||| ||||||||||| |||||||    
T  11002492 atagaacactatggcattgtttgattcatgtag 11002460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 404 - 511
Target Start/End: Original strand, 21952468 - 21952573
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||| |||||| || ||||||| | ||||||||||||| |||||||    
T  21952468 agtcaaatcactagaggtaggggaagacctagaaaaactat--gagaaactattgagaaggatctagagattaatgggttggagaaagacatggtttttg 21952565  T
Q  504 atataaca 511  Q
    ||| ||||    
T  21952566 atagaaca 21952573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 404 - 516
Target Start/End: Complemental strand, 31636091 - 31635979
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    |||||||||||||||| |||||||||| ||||||||||||| ||||||||||| |||| |||| | || || |||||| |||||||| |||| |||||||    
T  31636091 agtcaaatcactagagataggggaagatctagaaaaactattagagaaactatcaagaaggatatagagatcaatgagttggagaaacacatggtttttg 31635992  T
Q  504 atataacactatg 516  Q
     || |||||||||    
T  31635991 gtagaacactatg 31635979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 404 - 516
Target Start/End: Original strand, 14749418 - 14749530
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    ||||||||||||| ||| || |||||||||||||||||||||||||||||||| |||| |||||| || ||||| ||| |||| | | | || |||||||    
T  14749418 agtcaaatcactaaaggcagaggaagacctagaaaaactataagagaaactatcaagaaggatctagagattaacgagttggatagaaatatggtttttg 14749517  T
Q  504 atataacactatg 516  Q
    ||| |||||||||    
T  14749518 atagaacactatg 14749530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 398 - 536
Target Start/End: Original strand, 21915986 - 21916123
Alignment:
Q  398 gaggtaagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattg 497  Q
    |||| |||||| |||||||||| ||||| | |||  |||||||| ||||||||||| |||| || |||||| || || |||||| |||||||| |||||     
T  21915986 gagggaagtcagatcactagagatagggta-gacacagaaaaacgataagagaaacaattaggaaggatctagagataaatgagttggagaaatacatta 21916084  T
Q  498 tttttgatataacactatgacattgtttgatccatgtag 536  Q
    ||||||||| ||| ||||||||| ||||||| |||||||    
T  21916085 tttttgatagaactctatgacatcgtttgattcatgtag 21916123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 404 - 481
Target Start/End: Complemental strand, 38578692 - 38578615
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgag 481  Q
    ||||||||||||||| ||||||| |||||||||||||||| |||||||||||||| || |||||| || || ||||||    
T  38578692 agtcaaatcactagatgtaggggtagacctagaaaaactacaagagaaactattatgaaggatctagaaataaatgag 38578615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 410 - 540
Target Start/End: Original strand, 9235166 - 9235294
Alignment:
Q  410 atcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataa 509  Q
    ||||||||||| || |||||||||||||||||  ||||||||||||||||||  ||| | || ||||||||||||||   | | || |||| ||||| ||    
T  9235166 atcactagaggcagaggaagacctagaaaaac--taagagaaactattaagaaagatatagagattaatgagctggatcgaaatatggtttatgatagaa 9235263  T
Q  510 cactatgacattgtttgatccatgtagccga 540  Q
    || |||| |||  ||||||||||||||||||    
T  9235264 cattatggcataatttgatccatgtagccga 9235294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 404 - 458
Target Start/End: Original strand, 6859492 - 6859546
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    ||||||| ||||||||| || ||||||||||||||||||||||||||||||||||    
T  6859492 agtcaaaccactagaggaagaggaagacctagaaaaactataagagaaactatta 6859546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 404 - 461
Target Start/End: Complemental strand, 3775238 - 3775181
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||    
T  3775238 agtcaaatcactagaggcagaagaagacctagaaaaactataagataaactattaaga 3775181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 409 - 461
Target Start/End: Complemental strand, 15489658 - 15489606
Alignment:
Q  409 aatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    |||||||||||| || ||||||||||||||||| |||||||||||||||||||    
T  15489658 aatcactagaggcagaggaagacctagaaaaacaataagagaaactattaaga 15489606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 449 - 545
Target Start/End: Original strand, 37065632 - 37065728
Alignment:
Q  449 gaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacactatgacattgtttgatccatgtagccgatccca 545  Q
    |||||||||| || |||||| || || |||||| ||||||||||||| |||||||||| | ||||||||  | ||||||| ||||||||||| ||||    
T  37065632 gaaactattaggaaggatctagagataaatgagttggagaaagacatggtttttgatagagcactatgaagtcgtttgattcatgtagccgacccca 37065728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 446 - 525
Target Start/End: Original strand, 1174642 - 1174721
Alignment:
Q  446 agagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacactatgacattgttt 525  Q
    |||||| ||||||||| |||||| || ||||||||| | ||||||||||| ||||||||| |||||||||| | ||||||    
T  1174642 agagaatctattaagaaggatctagagattaatgagtttgagaaagacatggtttttgatgtaacactatggcgttgttt 1174721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 481
Target Start/End: Complemental strand, 12577025 - 12576954
Alignment:
Q  410 atcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgag 481  Q
    ||||||||||| || ||||||||||||||||||| |||| ||||||||||||  ||||| || |||||||||    
T  12577025 atcactagaggcagaggaagacctagaaaaactacaagataaactattaagaaagatctagagattaatgag 12576954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 407 - 506
Target Start/End: Original strand, 17213188 - 17213287
Alignment:
Q  407 caaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgata 506  Q
    |||||||||||| || || ||| || ||||||||||| |||| |||||||||| | |||||| || ||||||||| | |||||||||||  |||||||||    
T  17213188 caaatcactagatgtgggagaaaacttagaaaaactagaagaaaaactattaacaaggatctagagattaatgagttagagaaagacataatttttgata 17213287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 464 - 546
Target Start/End: Complemental strand, 3442982 - 3442900
Alignment:
Q  464 gatctggacattaatgagctggagaaagacattgtttttgatataacactatgacattgtttgatccatgtagccgatcccac 546  Q
    ||||| || ||||||||  ||||||||||||| |||||||||| ||||||||| | | ||||||| ||||||||||| |||||    
T  3442982 gatctagagattaatgaattggagaaagacatggtttttgatagaacactatggcgtcgtttgattcatgtagccgaccccac 3442900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 404 - 542
Target Start/End: Complemental strand, 15369967 - 15369830
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    ||||| ||||||||||||| || | |||||||||||| ||||||||||||||||||||   ||||  | || |||||| |||||| | ||||  || ||     
T  15369967 agtcatatcactagaggtatggta-gacctagaaaaagtataagagaaactattaagaaaaatctaaagataaatgagttggagacatacataattctta 15369869  T
Q  504 atataacactatgacattgtttgatccatgtagccgatc 542  Q
    ||| |||||||||||||| ||| ||  ||||||||||||    
T  15369868 ataaaacactatgacattatttaatttatgtagccgatc 15369830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 404 - 451
Target Start/End: Original strand, 18698905 - 18698952
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaa 451  Q
    ||||||||||||||||| || |||| ||||||||||||||||||||||    
T  18698905 agtcaaatcactagaggcagaggaatacctagaaaaactataagagaa 18698952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 418 - 461
Target Start/End: Original strand, 29922409 - 29922452
Alignment:
Q  418 aggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    |||||| |||||| ||||||||||||||||||||||||||||||    
T  29922409 aggtagaggaagatctagaaaaactataagagaaactattaaga 29922452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 458
Target Start/End: Original strand, 28005 - 28047
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    |||||| | ||||||||||||||||||||||||||||||||||    
T  28005 agaggttgaggaagacctagaaaaactataagagaaactatta 28047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 456
Target Start/End: Original strand, 5305756 - 5305802
Alignment:
Q  410 atcactagaggtaggggaagacctagaaaaactataagagaaactat 456  Q
    ||||||||||| || ||||||||||||||||||||| ||||||||||    
T  5305756 atcactagaggcagaggaagacctagaaaaactatatgagaaactat 5305802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 458
Target Start/End: Original strand, 6889104 - 6889158
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    ||||||| |||| |||| || ||||| ||||||||||||||||||||||||||||    
T  6889104 agtcaaaccacttgaggaagaggaaggcctagaaaaactataagagaaactatta 6889158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 486
Target Start/End: Original strand, 7678589 - 7678671
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    ||||| ||||||||||| || |||||| |||| ||||| ||||||||||||||| |||  ||||| || ||||||||| ||||    
T  7678589 agtcagatcactagaggcagaggaagatctagtaaaaccataagagaaactatttagaaagatctagagattaatgagttgga 7678671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 495
Target Start/End: Complemental strand, 8492513 - 8492413
Alignment:
Q  398 gaggtaagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaac---tattaagagggatctggacattaatgagctggagaaagaca 494  Q
    ||||| ||| |||||||| |||||||| ||| | |||||||||||||||| |||||   |||||||| |||||| || ||||||||| | | ||||||||    
T  8492513 gaggtgagttaaatcacttgaggtaggagaaaagctagaaaaactataagggaaactagtattaagaaggatctagagattaatgagttagtgaaagaca 8492414  T
Q  495 t 495  Q
    |    
T  8492413 t 8492413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 419 - 461
Target Start/End: Original strand, 27998567 - 27998609
Alignment:
Q  419 ggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    ||||| ||||||||||||||||||||||||||||||| |||||    
T  27998567 ggtagaggaagacctagaaaaactataagagaaactactaaga 27998609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 486
Target Start/End: Original strand, 42199397 - 42199479
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    |||||||||||||| || || | |||||||||||||||||| ||| |||||||| |||  ||||| || ||||||||| ||||    
T  42199397 agtcaaatcactagggggagagaaagacctagaaaaactattagacaaactatttagaaagatctagatattaatgagttgga 42199479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 486
Target Start/End: Original strand, 42199504 - 42199586
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    |||||||||||||| || || | |||||||||||||||||| ||| |||||||| |||  ||||| || ||||||||| ||||    
T  42199504 agtcaaatcactagggggagagaaagacctagaaaaactattagacaaactatttagaaagatctagatattaatgagttgga 42199586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 425 - 486
Target Start/End: Original strand, 79645 - 79706
Alignment:
Q  425 ggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    |||||||||||||||||||| ||| ||||||||| ||  ||| |||| ||||||||||||||    
T  79645 ggaagacctagaaaaactatcagataaactattaggaatgatttggaaattaatgagctgga 79706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 506
Target Start/End: Complemental strand, 34734567 - 34734463
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaggg--atctggacattaatgagctggagaaagacattgtttt 501  Q
    ||||| |||||| |||||| ||| ||| |||||||||||||| || ||||||||| || ||  |||| || || |||||| |||||||||||||  ||||    
T  34734567 agtcagatcactggaggtacgggtagatctagaaaaactatacgataaactattatgaaggatatctagagataaatgagttggagaaagacatgatttt 34734468  T
Q  502 tgata 506  Q
    |||||    
T  34734467 tgata 34734463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 481
Target Start/End: Complemental strand, 36123353 - 36123276
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgag 481  Q
    |||| ||||||||||||||  ||||||| ||||||| ||||||| ||||| || |||| |||||| || |||||||||    
T  36123353 agtcgaatcactagaggtaaaggaagacttagaaaagctataagggaaaccatcaagaaggatctagagattaatgag 36123276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 409 - 478
Target Start/End: Original strand, 38684596 - 38684665
Alignment:
Q  409 aatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaat 478  Q
    |||||||||| |||  ||||||||||||||||||| |||||||||| ||||||  ||||| || ||||||    
T  38684596 aatcactagatgtaaaggaagacctagaaaaactacaagagaaacttttaagaaagatctagagattaat 38684665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 444 - 516
Target Start/End: Original strand, 1935273 - 1935345
Alignment:
Q  444 taagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacactatg 516  Q
    ||||||||||||||| || |||||| || || |||||| ||||||||||||  |||||||| | |||||||||    
T  1935273 taagagaaactattaggaaggatctagagataaatgagttggagaaagacaaggtttttgacagaacactatg 1935345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 486
Target Start/End: Original strand, 14667888 - 14667964
Alignment:
Q  410 atcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    ||||||||||| || ||||  ||||||||||||||||||||| ||| |||||  ||||| || ||||||||| ||||    
T  14667888 atcactagaggcagcggaaatcctagaaaaactataagagaagctactaagaaagatctagagattaatgagttgga 14667964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 461
Target Start/End: Complemental strand, 38341591 - 38341539
Alignment:
Q  409 aatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    ||||||||||| |||  |||||| ||||| |||||||||||||||||||||||    
T  38341591 aatcactagagttagatgaagacttagaagaactataagagaaactattaaga 38341539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 461
Target Start/End: Complemental strand, 1001331 - 1001296
Alignment:
Q  426 gaagacctagaaaaactataagagaaactattaaga 461  Q
    |||||||||||||||||||||| |||||||||||||    
T  1001331 gaagacctagaaaaactataagtgaaactattaaga 1001296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 461
Target Start/End: Complemental strand, 3775314 - 3775279
Alignment:
Q  426 gaagacctagaaaaactataagagaaactattaaga 461  Q
    |||||||||||||||||||||||||||||| |||||    
T  3775314 gaagacctagaaaaactataagagaaactactaaga 3775279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 28411835 - 28411929
Alignment:
Q  452 actattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacactatgacattgtttgatccatgtagccgatcccac 546  Q
    ||||||| || |||||| || || |||||  |||||||| ||||  ||| ||||| ||||||||| | ||||||||| ||||||||||| |||||    
T  28411835 actattaggaaggatctagagataaatgacttggagaaaaacatgttttctgatagaacactatggcgttgtttgattcatgtagccgaccccac 28411929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 458
Target Start/End: Original strand, 32516679 - 32516720
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    |||||||| |||||||||| |||||||||||||||||||||||    
T  32516679 agaggtagaggaagaccta-aaaaactataagagaaactatta 32516720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 6788179 - 6788232
Alignment:
Q  405 gtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    |||| ||||||||||| || |||||||||||||||||||| | || ||||||||    
T  6788179 gtcagatcactagaggcagaggaagacctagaaaaactatcaaaggaactatta 6788232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 457
Target Start/End: Complemental strand, 7359431 - 7359378
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatt 457  Q
    ||||| ||||||||||| || ||||  ||||||||||| |||||||||||||||    
T  7359431 agtcatatcactagaggcagaggaaagcctagaaaaaccataagagaaactatt 7359378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 457
Target Start/End: Complemental strand, 9917621 - 9917568
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatt 457  Q
    ||||||||||| ||||  || ||| |||||||||||||||| ||||||||||||    
T  9917621 agtcaaatcacaagagacagaggatgacctagaaaaactattagagaaactatt 9917568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 458
Target Start/End: Complemental strand, 15588534 - 15588505
Alignment:
Q  429 gacctagaaaaactataagagaaactatta 458  Q
    ||||||||||||||||||||||||||||||    
T  15588534 gacctagaaaaactataagagaaactatta 15588505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 486
Target Start/End: Original strand, 30588579 - 30588640
Alignment:
Q  425 ggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    |||||||||||||||||||||||||||| | ||||||  ||||| || || |||||| ||||    
T  30588579 ggaagacctagaaaaactataagagaaattgttaagaaagatctagagatgaatgagttgga 30588640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 455
Target Start/End: Complemental strand, 8082113 - 8082073
Alignment:
Q  416 agaggtaggggaagacctagaaaaactat-aagagaaacta 455  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  8082113 agaggtagaggaagacctagaaaaactataaagagaaacta 8082073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 433 - 461
Target Start/End: Original strand, 11753144 - 11753172
Alignment:
Q  433 tagaaaaactataagagaaactattaaga 461  Q
    |||||||||||||||||||||||||||||    
T  11753144 tagaaaaactataagagaaactattaaga 11753172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 452
Target Start/End: Original strand, 40938034 - 40938082
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaa 452  Q
    |||||||||  |||||| || |||||||||||||||| |||||||||||    
T  40938034 agtcaaatcgttagaggcagaggaagacctagaaaaaatataagagaaa 40938082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 7e-35; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 404 - 539
Target Start/End: Complemental strand, 10617405 - 10617270
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    ||||||||||||||||||||  ||| |||||||||||||||||||||||| ||||||| |||||| || ||||||||| ||||||||||||| |||||||    
T  10617405 agtcaaatcactagaggtagaagaaaacctagaaaaactataagagaaaccattaagaaggatctagagattaatgagttggagaaagacatggtttttg 10617306  T
Q  504 atataacactatgacattgtttgatccatgtagccg 539  Q
    ||| |||||| || | |||||||||  |||||||||    
T  10617305 atagaacactttggcgttgtttgatttatgtagccg 10617270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 404 - 542
Target Start/End: Complemental strand, 7513561 - 7513422
Alignment:
Q  404 agtcaaatcactagaggtagggg-aagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgttttt 502  Q
    ||||||||||||||||| ||||| ||||||| || ||||||||||||||||| ||| || |||||| || || |||||| ||||||||||||| ||||||    
T  7513561 agtcaaatcactagaggcagggggaagacctggataaactataagagaaacttttaggaaggatctagagatgaatgagttggagaaagacatggttttt 7513462  T
Q  503 gatataacactatgacattgtttgatccatgtagccgatc 542  Q
    |||| ||||||||| | ||||||||| |||||||| ||||    
T  7513461 gatagaacactatggcgttgtttgattcatgtagctgatc 7513422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 413 - 504
Target Start/End: Original strand, 38883 - 38974
Alignment:
Q  413 actagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttga 504  Q
    ||||||||| |||| | ||||||||||||||||||||||||||||| || |||||| || || |||||| ||||||||||||| ||||||||    
T  38883 actagaggtcggggtatacctagaaaaactataagagaaactattaggaaggatctagagataaatgagttggagaaagacatggtttttga 38974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 410 - 546
Target Start/End: Original strand, 31818648 - 31818784
Alignment:
Q  410 atcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataa 509  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||| ||  | | |||| ||||||||| ||||  ||   || |||| ||||| ||    
T  31818648 atcactaaaggtaggagaagacctagaaaaactataagagaaactattaggaaaggtttggagattaatgagttggatcaaagtatggtttatgatagaa 31818747  T
Q  510 cactatgacattgtttgatccatgtagccgatcccac 546  Q
    || |||| | |  |||||||||||||||||| |||||    
T  31818748 cattatgtcgtaatttgatccatgtagccgaccccac 31818784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 410 - 486
Target Start/End: Complemental strand, 34670 - 34594
Alignment:
Q  410 atcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    ||||||||||| || ||||||||||||||||||||||||||||| |||||||  |||||  | ||||||||| ||||    
T  34670 atcactagaggcagaggaagacctagaaaaactataagagaaaccattaagaaagatctaaagattaatgagttgga 34594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 404 - 492
Target Start/End: Complemental strand, 1747812 - 1747724
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaaga 492  Q
    ||||||||  ||||||| || ||||||||||||||||| ||||||||||||  ||||| |||||| || ||||||||| |||| |||||    
T  1747812 agtcaaatttctagaggcagaggaagacctagaaaaaccataagagaaactggtaagaaggatctagagattaatgagttggataaaga 1747724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 405 - 540
Target Start/End: Original strand, 8364668 - 8364803
Alignment:
Q  405 gtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttga 504  Q
    |||| ||||||||||| ||  ||||||||| ||||||||||||||||||||||||||  ||| | || |||||| || ||||   | |||| |||| |||    
T  8364668 gtcagatcactagaggaagatgaagacctaaaaaaactataagagaaactattaagaaagatttagaaattaataagttggactgaaacatggtttatga 8364767  T
Q  505 tataacactatgacattgtttgatccatgtagccga 540  Q
    || |||| |||| | |  ||||||||||||||||||    
T  8364768 tagaacattatggcgtaatttgatccatgtagccga 8364803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 461
Target Start/End: Complemental strand, 33997715 - 33997658
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    ||||||| ||||||||| || ||||||||| | |||||||||||||||||||||||||    
T  33997715 agtcaaaacactagaggcagaggaagaccttggaaaactataagagaaactattaaga 33997658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 404 - 447
Target Start/End: Original strand, 3963910 - 3963953
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataag 447  Q
    ||||||||||| |||||||| |||||||||||||||||||||||    
T  3963910 agtcaaatcaccagaggtagaggaagacctagaaaaactataag 3963953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 404 - 458
Target Start/End: Complemental strand, 9593877 - 9593825
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    ||||||||||  |||||||| |||||||||||||||| |||||||||||||||||    
T  9593877 agtcaaatca--agaggtagaggaagacctagaaaaattataagagaaactatta 9593825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 457
Target Start/End: Complemental strand, 4948475 - 4948422
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatt 457  Q
    ||||||| |||||||||||| |||||||||| |||||||| |||| ||||||||    
T  4948475 agtcaaaccactagaggtagaggaagacctacaaaaactaaaagaaaaactatt 4948422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 457
Target Start/End: Complemental strand, 4955446 - 4955393
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatt 457  Q
    ||||||| |||||||||||| |||||||||| |||||||| |||| ||||||||    
T  4955446 agtcaaaccactagaggtagaggaagacctacaaaaactaaaagaaaaactatt 4955393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 537
Target Start/End: Original strand, 7080451 - 7080584
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    |||||||||  |||| |||| |||| ||||| ||||||||||||||||||||| ||||  |||||  | ||||||||   ||||||| ||||  ||||||    
T  7080451 agtcaaatctttagaagtagaggaaaacctataaaaactataagagaaactatcaagaaagatctaaagattaatgaatcggagaaatacatgatttttg 7080550  T
Q  504 atataacactatgacattgtttgatccatgtagc 537  Q
    |||  || ||||||| |  |||||| ||||||||    
T  7080551 ataggactctatgacgtaatttgattcatgtagc 7080584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 481
Target Start/End: Complemental strand, 1681671 - 1681615
Alignment:
Q  425 ggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgag 481  Q
    |||||||||| ||||  |||||||||||||||||||| |||||| || |||||||||    
T  1681671 ggaagacctaaaaaagttataagagaaactattaagaaggatctagagattaatgag 1681615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 454
Target Start/End: Original strand, 5095957 - 5095995
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaact 454  Q
    |||||||| ||||||||||||||||||| ||||||||||    
T  5095957 agaggtagaggaagacctagaaaaactagaagagaaact 5095995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 458
Target Start/End: Original strand, 7133869 - 7133911
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    |||||||| |||||||||||||||||||| |||||||| ||||    
T  7133869 agaggtagaggaagacctagaaaaactattagagaaaccatta 7133911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 458
Target Start/End: Original strand, 7136792 - 7136834
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    |||||||| |||||||||||||||||||| |||||||| ||||    
T  7136792 agaggtagaggaagacctagaaaaactattagagaaaccatta 7136834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 497 - 543
Target Start/End: Complemental strand, 30789152 - 30789106
Alignment:
Q  497 gtttttgatataacactatgacattgtttgatccatgtagccgatcc 543  Q
    |||||||||| ||||||||||| |  |||||||||||||||||||||    
T  30789152 gtttttgatagaacactatgacgtcatttgatccatgtagccgatcc 30789106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 461
Target Start/End: Complemental strand, 32913433 - 32913375
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactat-aagagaaactattaaga 461  Q
    |||||||||||||||||||| | |||  ||||||||||||| || ||||||||||||||    
T  32913433 agtcaaatcactagaggtagagaaaggtctagaaaaactataaaaagaaactattaaga 32913375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 497 - 546
Target Start/End: Original strand, 9706974 - 9707023
Alignment:
Q  497 gtttttgatataacactatgacattgtttgatccatgtagccgatcccac 546  Q
    |||||||||| ||||||||| |||  |||||||||||||||||| |||||    
T  9706974 gtttttgatagaacactatggcatcatttgatccatgtagccgaccccac 9707023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 458
Target Start/End: Complemental strand, 6055928 - 6055888
Alignment:
Q  418 aggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    |||||| |||||||||| ||||||| |||||||||||||||    
T  6055928 aggtagaggaagacctataaaaactttaagagaaactatta 6055888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 427 - 459
Target Start/End: Original strand, 13674759 - 13674791
Alignment:
Q  427 aagacctagaaaaactataagagaaactattaa 459  Q
    |||||||| ||||||||||||||||||||||||    
T  13674759 aagacctataaaaactataagagaaactattaa 13674791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 7e-35; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 411 - 546
Target Start/End: Original strand, 27893207 - 27893342
Alignment:
Q  411 tcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataac 510  Q
    ||||| ||||||| |||||||||||||| |||||||||||||||||||| | ||| || || ||||||||| |||||||||||||  ||||||| | |||    
T  27893207 tcacttgaggtagaggaagacctagaaagactataagagaaactattaaaaaggacctagagattaatgagttggagaaagacatgatttttgaaagaac 27893306  T
Q  511 actatgacattgtttgatccatgtagccgatcccac 546  Q
    |||||| ||||||||||| |||||||||||||||||    
T  27893307 actatggcattgtttgattcatgtagccgatcccac 27893342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 407 - 546
Target Start/End: Original strand, 37351521 - 37351660
Alignment:
Q  407 caaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgata 506  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| || ||||  ||||| || ||||||||| |||||||||| || ||||||| ||    
T  37351521 caaatcactagaggtaggggaagacctagaaaaactattagagaaacaatcaagaaagatctagagattaatgagatggagaaagatatggtttttgtta 37351620  T
Q  507 taacactatgacattgtttgatccatgtagccgatcccac 546  Q
     ||||||| ||| | ||||||| ||||||||||| |||||    
T  37351621 gaacactacgacgtcgtttgattcatgtagccgaccccac 37351660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 404 - 495
Target Start/End: Original strand, 26990324 - 26990415
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacat 495  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||| |||||| || || |||||| |||||||||||||    
T  26990324 agtcaaatcactcgaggtaggggaagacctagaaaaactattagagaaactatcaagaaggatctagagatcaatgagttggagaaagacat 26990415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 399 - 535
Target Start/End: Original strand, 11581550 - 11581686
Alignment:
Q  399 aggtaagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgt 498  Q
    |||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  |||||  | || |||||| || ||||||||||  |    
T  11581550 aggtgagtcaaatcactagaggtatgagaagacctagaaaaactataagagaaactattaagaaagatctatagataaatgagttgaagaaagacatgat 11581649  T
Q  499 ttttgatataacactatgacattgtttgatccatgta 535  Q
    |||| ||| |||| ||||  || ||||||| ||||||    
T  11581650 tttttatagaacattatggtatcgtttgattcatgta 11581686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 420 - 546
Target Start/End: Complemental strand, 31454380 - 31454254
Alignment:
Q  420 gtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacactatgaca 519  Q
    |||||||| ||||||||||||||||||| |||||||||||   |||||| || ||||||||  ||||||||||||| |||||||||| ||||||||| |     
T  31454380 gtaggggatgacctagaaaaactataagggaaactattaattaggatctagatattaatgaattggagaaagacatggtttttgatagaacactatggcg 31454281  T
Q  520 ttgtttgatccatgtagccgatcccac 546  Q
    |  |||||| ||| ||||||| |||||    
T  31454280 tcatttgattcatttagccgaccccac 31454254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 404 - 461
Target Start/End: Complemental strand, 31261113 - 31261056
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||    
T  31261113 agtcaaatcactagaggcagaggaagacctagaaaaactataagagaaactatcaaga 31261056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 394 - 481
Target Start/End: Complemental strand, 2340898 - 2340811
Alignment:
Q  394 aatagaggtaagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgag 481  Q
    ||||||||  ||||||||||||| || ||| | ||||||||| |||||||||||||||||||||||||  ||||| || |||||||||    
T  2340898 aatagagggtagtcaaatcactaaagctagagaaagacctaggaaaactataagagaaactattaagaaagatctagagattaatgag 2340811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 398 - 456
Target Start/End: Original strand, 43254996 - 43255054
Alignment:
Q  398 gaggtaagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactat 456  Q
    |||| |||||| ||||||||||||||||| ||||||||||||||||| |||||||||||    
T  43254996 gagggaagtcagatcactagaggtaggggtagacctagaaaaactatgagagaaactat 43255054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 425 - 546
Target Start/End: Complemental strand, 31453111 - 31452990
Alignment:
Q  425 ggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacactatgacattgtt 524  Q
    |||||||||||| || |||||  ||||||||| |||| |||||| || ||||||||  ||| ||||||||| |||||||| |||| |||||| | | |||    
T  31453111 ggaagacctagataagctatataagaaactatcaagaaggatctagatattaatgaattggtgaaagacatggtttttgacataatactatggcgtcgtt 31453012  T
Q  525 tgatccatgtagccgatcccac 546  Q
    |||| |||||||| || |||||    
T  31453011 tgattcatgtagcagaccccac 31452990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 416 - 461
Target Start/End: Complemental strand, 39600840 - 39600795
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  39600840 agaggtagaggaagacctagaaaaactataagagaaactattaaga 39600795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 416 - 540
Target Start/End: Complemental strand, 54365134 - 54365010
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacactat 515  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||  ||  |||| ||||||| | | ||  || | || |||| ||||| ||||||||    
T  54365134 agaggcagaggaagacctagaaaaactataagagaaactattaggaaagacttggagattaatgtgttagaccaaaatatggtttatgatagaacactat 54365035  T
Q  516 gacattgtttgatccatgtagccga 540  Q
    ||| |  ||||||||||||||||||    
T  54365034 gacgtaatttgatccatgtagccga 54365010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 404 - 479
Target Start/End: Original strand, 40982007 - 40982082
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatg 479  Q
    ||||||||||||||||  |  ||||||||||||||||||||||||| |||||||||||  ||||| || |||||||    
T  40982007 agtcaaatcactagagacaaaggaagacctagaaaaactataagagtaactattaagaaagatctagatattaatg 40982082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 408 - 546
Target Start/End: Original strand, 659640 - 659778
Alignment:
Q  408 aaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatat 507  Q
    ||||||||||||| |  |||||||||||||||||| |||||||||| || |||| | || |  | ||||||||| |||| |  || ||| | | |||||     
T  659640 aaatcactagaggcaaaggaagacctagaaaaactgtaagagaaaccatcaagatgtatttacagattaatgagttggatagggatattatatatgatag 659739  T
Q  508 aacactatgacattgtttgatccatgtagccgatcccac 546  Q
    |||| |||| || |||||||||||||||||||| |||||    
T  659740 aacattatggcagtgtttgatccatgtagccgaccccac 659778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 404 - 486
Target Start/End: Original strand, 21200659 - 21200741
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    |||||||||||||| || || |||||||||||||||||||| ||| |||||||| |||  ||||| || ||||||||| ||||    
T  21200659 agtcaaatcactagggggagaggaagacctagaaaaactattagacaaactatttagaaagatctagatattaatgagttgga 21200741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 461
Target Start/End: Original strand, 46146207 - 46146264
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    ||||||||||||||||| |  |||||| ||||||||||||||| ||||||||||||||    
T  46146207 agtcaaatcactagaggcataggaagatctagaaaaactataaaagaaactattaaga 46146264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 410 - 458
Target Start/End: Complemental strand, 33755507 - 33755459
Alignment:
Q  410 atcactagaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    ||||||||||| || |||| |||||||||||||||||||||||||||||    
T  33755507 atcactagaggcagaggaaaacctagaaaaactataagagaaactatta 33755459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 430 - 481
Target Start/End: Complemental strand, 36820122 - 36820071
Alignment:
Q  430 acctagaaaaactataagagaaactattaagagggatctggacattaatgag 481  Q
    ||||||||||||||||||||||||||||||||  ||||| || |||||||||    
T  36820122 acctagaaaaactataagagaaactattaagaaagatctagagattaatgag 36820071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 458
Target Start/End: Complemental strand, 40116639 - 40116585
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    ||||| ||||||||||  |  ||||||||||||||||||||||||||||||||||    
T  40116639 agtcagatcactagagccaaaggaagacctagaaaaactataagagaaactatta 40116585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 546
Target Start/End: Complemental strand, 42510187 - 42510045
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    ||||| ||||||||||| |  |||||||||||||||||||| |||||||| |||| ||  ||| |||| || |||||| ||||  || | || |||| ||    
T  42510187 agtcagatcactagaggcaaaggaagacctagaaaaactatcagagaaaccattaggaaagatttggaaataaatgagttggaccaaaatatggtttatg 42510088  T
Q  504 atataacactatgacattgtttgatccatgtagccgatcccac 546  Q
    ||  |||| |||| | |  |||||||||||||||||| |||||    
T  42510087 attgaacattatggcgtaatttgatccatgtagccgaccccac 42510045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 410 - 486
Target Start/End: Original strand, 29475805 - 29475879
Alignment:
Q  410 atcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    ||||||||||| || ||||||||||||||| |||||  ||||||||||||||  ||||| || ||||||||| ||||    
T  29475805 atcactagaggcagaggaagacctagaaaagctata--agaaactattaagaaagatctagagattaatgagttgga 29475879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 461
Target Start/End: Original strand, 37228193 - 37228250
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    ||||||||||||||||| || | |||||||| |||||| ||||| |||||||||||||    
T  37228193 agtcaaatcactagaggcagagaaagacctataaaaacgataagggaaactattaaga 37228250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 457
Target Start/End: Original strand, 38430959 - 38431012
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatt 457  Q
    ||||||||||  |||||||| ||||||| ||||||||||| |||||||||||||    
T  38430959 agtcaaatcaaaagaggtagaggaagacttagaaaaactacaagagaaactatt 38431012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 478 - 546
Target Start/End: Original strand, 3987519 - 3987587
Alignment:
Q  478 tgagctggagaaagacattgtttttgatataacactatgacattgtttgatccatgtagccgatcccac 546  Q
    |||| ||||||||||||| ||||||||||  |||||||| | ||||||||| |||||| |||| |||||    
T  3987519 tgagttggagaaagacatggtttttgataggacactatggcgttgtttgattcatgtacccgaccccac 3987587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 459
Target Start/End: Complemental strand, 30294280 - 30294237
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactattaa 459  Q
    |||||||| ||||||||||||| |||||||||| ||||||||||    
T  30294280 agaggtagaggaagacctagaagaactataagataaactattaa 30294237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 458
Target Start/End: Complemental strand, 34844721 - 34844690
Alignment:
Q  427 aagacctagaaaaactataagagaaactatta 458  Q
    ||||||||||||||||||||||||||||||||    
T  34844721 aagacctagaaaaactataagagaaactatta 34844690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 495
Target Start/End: Original strand, 41087875 - 41087946
Alignment:
Q  424 gggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacat 495  Q
    |||||||||| |||||||||||| ||||| |||||||| |||| | || ||||||||| || | ||||||||    
T  41087875 gggaagacctggaaaaactataaaagaaattattaagaaggatttagagattaatgagttgaataaagacat 41087946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 458
Target Start/End: Complemental strand, 45487000 - 45486969
Alignment:
Q  427 aagacctagaaaaactataagagaaactatta 458  Q
    ||||||||||||||||||||||||||||||||    
T  45487000 aagacctagaaaaactataagagaaactatta 45486969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 486
Target Start/End: Complemental strand, 46431844 - 46431768
Alignment:
Q  406 tcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    ||||||||||||||| ||    ||| |||||||||||||||||||||||||||| |  ||||| || ||||||||| ||||    
T  46431844 tcaaatcactagaggcag----agaactagaaaaactataagagaaactattaaaaaagatctagagattaatgagttgga 46431768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 458
Target Start/End: Complemental strand, 53998802 - 53998755
Alignment:
Q  411 tcactagaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    |||||||||| |  |||||||| |||||||||||||||||||||||||    
T  53998802 tcactagaggcaaaggaagacccagaaaaactataagagaaactatta 53998755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 415 - 461
Target Start/End: Original strand, 11284115 - 11284160
Alignment:
Q  415 tagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    |||| |||| ||||||||||||||| |||||||||||||||||||||    
T  11284115 tagatgtagaggaagacctagaaaa-ctataagagaaactattaaga 11284160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 458
Target Start/End: Original strand, 14783673 - 14783727
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    ||||| ||| ||| ||||||  ||||||||||||||||||| |||||||||||||    
T  14783673 agtcagatccctaaaggtagatgaagacctagaaaaactatcagagaaactatta 14783727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 408 - 466
Target Start/End: Original strand, 22902913 - 22902971
Alignment:
Q  408 aaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggat 466  Q
    ||||||||||| |||||||||||  ||||||||| ||||||||| |||| |||| ||||    
T  22902913 aaatcactagatgtaggggaagatatagaaaaaccataagagaagctataaagaaggat 22902971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 427 - 461
Target Start/End: Original strand, 43308696 - 43308730
Alignment:
Q  427 aagacctagaaaaactataagagaaactattaaga 461  Q
    ||||||||||||||||| |||||||||||||||||    
T  43308696 aagacctagaaaaactacaagagaaactattaaga 43308730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 458
Target Start/End: Original strand, 48508358 - 48508400
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    |||||||| ||||||||||| ||||||||||||||||| ||||    
T  48508358 agaggtagaggaagacctaggaaaactataagagaaaccatta 48508400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 458
Target Start/End: Complemental strand, 19676231 - 19676198
Alignment:
Q  425 ggaagacctagaaaaactataagagaaactatta 458  Q
    |||||||||||||||||| |||||||||||||||    
T  19676231 ggaagacctagaaaaactgtaagagaaactatta 19676198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 458
Target Start/End: Complemental strand, 34719230 - 34719197
Alignment:
Q  425 ggaagacctagaaaaactataagagaaactatta 458  Q
    |||||||||||||||||||||| |||||||||||    
T  34719230 ggaagacctagaaaaactataaaagaaactatta 34719197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 461
Target Start/End: Original strand, 37228039 - 37228096
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    ||||||||||| ||||| || | |||||||| |||||| ||||| |||||||||||||    
T  37228039 agtcaaatcaccagaggcagagaaagacctataaaaacgataagggaaactattaaga 37228096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 458
Target Start/End: Complemental strand, 41482304 - 41482255
Alignment:
Q  410 atcactagaggtaggggaagacctagaaaaac-tataagagaaactatta 458  Q
    ||||||||||| || ||||||||||||||||| | |||||||||||||||    
T  41482304 atcactagaggcagaggaagacctagaaaaacttttaagagaaactatta 41482255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 497 - 546
Target Start/End: Original strand, 53519784 - 53519833
Alignment:
Q  497 gtttttgatataacactatgacattgtttgatccatgtagccgatcccac 546  Q
    |||||||||| ||||||||||| |  |||||||||||||||||| |||||    
T  53519784 gtttttgatagaacactatgacgtcatttgatccatgtagccgaccccac 53519833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 456
Target Start/End: Original strand, 54128501 - 54128542
Alignment:
Q  416 agaggtaggggaagacctagaaaaacta-taagagaaactat 456  Q
    |||||||| ||||||||||||||||||| |||||||||||||    
T  54128501 agaggtagaggaagacctagaaaaactattaagagaaactat 54128542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 425 - 461
Target Start/End: Complemental strand, 21427732 - 21427696
Alignment:
Q  425 ggaagacctagaaaaactataagagaaactattaaga 461  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  21427732 ggaagaccaagaaaaattataagagaaactattaaga 21427696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 410 - 458
Target Start/End: Complemental strand, 23534735 - 23534687
Alignment:
Q  410 atcactagaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    |||||||||||||| |||||||| | ||||| ||||| |||||||||||    
T  23534735 atcactagaggtagaggaagacccaaaaaaattataacagaaactatta 23534687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 502 - 546
Target Start/End: Original strand, 32170614 - 32170658
Alignment:
Q  502 tgatataacactatgacattgtttgatccatgtagccgatcccac 546  Q
    |||||||||| ||||||||  |||||||||||||||||| |||||    
T  32170614 tgatataacattatgacataatttgatccatgtagccgaccccac 32170658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 436
Target Start/End: Complemental strand, 40743319 - 40743287
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctaga 436  Q
    |||||||||||||||| ||||||||||||||||    
T  40743319 agtcaaatcactagagttaggggaagacctaga 40743287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 426 - 486
Target Start/End: Complemental strand, 44443353 - 44443293
Alignment:
Q  426 gaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    |||| |||||||||||||||||||||||| ||||||  ||||| || ||| ||||| ||||    
T  44443353 gaaggcctagaaaaactataagagaaacttttaagaatgatctagagattgatgagttgga 44443293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 502 - 546
Target Start/End: Original strand, 52139009 - 52139053
Alignment:
Q  502 tgatataacactatgacattgtttgatccatgtagccgatcccac 546  Q
    ||||| ||||||||||| || |||||||||||||||||| |||||    
T  52139009 tgatagaacactatgacgttatttgatccatgtagccgaccccac 52139053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 7e-32; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 404 - 546
Target Start/End: Complemental strand, 19119594 - 19119453
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    |||||||||||||||||||| ||||||||||||||| |||| ||||||||||| |||| |||||| || || |||||| | ||||||||||| | |||||    
T  19119594 agtcaaatcactagaggtagtggaagacctagaaaa-ctattagagaaactatcaagatggatctagagatcaatgagtttgagaaagacatggcttttg 19119496  T
Q  504 atataacactatgacattgtttgatccatgtagccgatcccac 546  Q
    ||| ||||||||||| | ||||||| ||||||||||| |||||    
T  19119495 atacaacactatgacgtcgtttgattcatgtagccgaccccac 19119453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 410 - 546
Target Start/End: Original strand, 34745864 - 34746000
Alignment:
Q  410 atcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataa 509  Q
    |||||||||| |||||| |||||||||||||| |||||||||||||||| || ||||||  | || |||||| |||||||| |||| |||||||||| ||    
T  34745864 atcactagagttaggggtagacctagaaaaaccataagagaaactattaggaaggatctaaagataaatgagttggagaaaaacatggtttttgatagaa 34745963  T
Q  510 cactatgacattgtttgatccatgtagccgatcccac 546  Q
    | ||||| | ||||||||| ||||||||||| |||||    
T  34745964 cgctatggcgttgtttgattcatgtagccgaccccac 34746000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 404 - 540
Target Start/End: Original strand, 5336031 - 5336165
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    |||||||||||| |||||||||||| |||| ||||||||||  |||| ||||||||||  ||||| || ||||||||| ||||||||||||| |||||||    
T  5336031 agtcaaatcactcgaggtaggggaaaaccttgaaaaactat--gagatactattaagaatgatctagagattaatgagttggagaaagacatggtttttg 5336128  T
Q  504 atataacactatgacattgtttgatccatgtagccga 540  Q
    ||  || |||||| | | ||||||| |||||||||||    
T  5336129 attgaatactatggcgtcgtttgattcatgtagccga 5336165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 404 - 461
Target Start/End: Original strand, 14593871 - 14593928
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14593871 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 14593928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 404 - 461
Target Start/End: Original strand, 16013394 - 16013451
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16013394 agtcaaatcaccagaggtaggggaagacctagaaaaactataagagaaactattaaga 16013451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 404 - 458
Target Start/End: Complemental strand, 28628104 - 28628050
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  28628104 agtcaaatcacaagaggtagaggaagacctagaaaaactataagagaaactatta 28628050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 408 - 481
Target Start/End: Original strand, 40830317 - 40830390
Alignment:
Q  408 aaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgag 481  Q
    ||||||||||||  || ||||||||||||||| ||||||||||||||||||||| |||||| || |||||||||    
T  40830317 aaatcactagagacagaggaagacctagaaaatctataagagaaactattaagaaggatctagaaattaatgag 40830390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 414 - 486
Target Start/End: Original strand, 45601597 - 45601669
Alignment:
Q  414 ctagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||  ||||| || ||||||||| ||||    
T  45601597 ctagaggtagaggaagacctagaaaaactataagagaaaccattaagaaagatctagagattaatgagttgga 45601669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 395 - 506
Target Start/End: Complemental strand, 36514387 - 36514277
Alignment:
Q  395 atagaggtaagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagaca 494  Q
    |||||||  |||||| ||||||||||||||||| ||| ||||||||  ||||||||| |||| |||| |||||| || || |||||  ||||||||||||    
T  36514387 atagaggggagtcaagtcactagaggtagggga-gacatagaaaaaacataagagaagctatcaagaaggatctagagataaatgaattggagaaagaca 36514289  T
Q  495 ttgtttttgata 506  Q
    | ||||||||||    
T  36514288 tggtttttgata 36514277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 425 - 546
Target Start/End: Original strand, 12966148 - 12966269
Alignment:
Q  425 ggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacactatgacattgtt 524  Q
    |||||||||||||||||||||||||||||||||||||   || | || ||||||||  |||| | | | || || | ||||| | || |||| |||||||    
T  12966148 ggaagacctagaaaaactataagagaaactattaagaaatatttagagattaatgatttggatagaaatatggtatatgataaatcattatgccattgtt 12966247  T
Q  525 tgatccatgtagccgatcccac 546  Q
    |||| |||||||||||||||||    
T  12966248 tgattcatgtagccgatcccac 12966269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 404 - 461
Target Start/End: Complemental strand, 30814842 - 30814785
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    ||||| ||||||||||| || |||||||||||||| ||||||||||||||||||||||    
T  30814842 agtcagatcactagaggcagaggaagacctagaaacactataagagaaactattaaga 30814785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 406 - 486
Target Start/End: Complemental strand, 24549857 - 24549777
Alignment:
Q  406 tcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    ||||||||||||||||||  ||||||||  || |||||||||||||||||||||||  ||||| || ||||||||| ||||    
T  24549857 tcaaatcactagaggtagaagaagacctgaaagaactataagagaaactattaagaaagatctagagattaatgagttgga 24549777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 404 - 458
Target Start/End: Complemental strand, 18605317 - 18605263
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    ||||||||||||||| ||| ||| |||||||||||||||| ||||||||||||||    
T  18605317 agtcaaatcactagatgtatgggtagacctagaaaaactacaagagaaactatta 18605263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 404 - 538
Target Start/End: Complemental strand, 48736071 - 48735938
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    ||||| ||||||||||||||||  |||||| ||||||||||||||||  ||||||  |||| ||| || || |||||| | ||||||||||| |||| ||    
T  48736071 agtcagatcactagaggtagggctagaccttgaaaaactataagagaggctattagtagggttctagagataaatgagtttgagaaagacatggtttatg 48735972  T
Q  504 atataacactatgacattgtttgatccatgtagcc 538  Q
    | | || |||||| | | ||||||| |||||||||    
T  48735971 a-agaatactatggcgtcgtttgattcatgtagcc 48735938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 410 - 546
Target Start/End: Original strand, 22174117 - 22174253
Alignment:
Q  410 atcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataa 509  Q
    ||||||||||| || |||| || |||||||||||||||||||||||| || |  ||||| || ||||||||  | || | | | || || | ||||| ||    
T  22174117 atcactagaggcagaggaaaacgtagaaaaactataagagaaactataaacaaagatctagagattaatgaattagatagaaatatggtatgtgatagaa 22174216  T
Q  510 cactatgacattgtttgatccatgtagccgatcccac 546  Q
    || |||| | ||||||||||||||||||||| |||||    
T  22174217 cattatggcgttgtttgatccatgtagccgaccccac 22174253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 461
Target Start/End: Complemental strand, 44401290 - 44401239
Alignment:
Q  410 atcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    |||||||||||| | ||| |||||||||||| ||||||||||||||||||||    
T  44401290 atcactagaggtggaggatgacctagaaaaattataagagaaactattaaga 44401239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 429 - 516
Target Start/End: Original strand, 45558467 - 45558553
Alignment:
Q  429 gacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacactatg 516  Q
    ||||||||||||| | |||||||||||||  || |||||| || || |||||| ||| ||||||||| |||||||||| |||||||||    
T  45558467 gacctagaaaaacga-aagagaaactattgggaaggatctagagataaatgagttggtgaaagacatggtttttgatagaacactatg 45558553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 47848791 - 47848838
Alignment:
Q  410 atcactagaggtaggggaagacctagaaaaactataagagaaactatt 457  Q
    ||||||||||| || |||||| ||||||||||||||||||||||||||    
T  47848791 atcactagaggcagaggaagaactagaaaaactataagagaaactatt 47848838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 458
Target Start/End: Original strand, 18637673 - 18637727
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    ||||||||||||||| ||| ||| ||||||||||||| || ||||||||||||||    
T  18637673 agtcaaatcactagatgtatgggtagacctagaaaaaatacaagagaaactatta 18637727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 458
Target Start/End: Original strand, 18651107 - 18651161
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    ||||||||||||||| ||| ||| ||||||||||||| || ||||||||||||||    
T  18651107 agtcaaatcactagatgtatgggtagacctagaaaaaatacaagagaaactatta 18651161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 456 - 538
Target Start/End: Original strand, 25578023 - 25578105
Alignment:
Q  456 ttaagagggatctggacattaatgagctggagaaagacattgtttttgatataacactatgacattgtttgatccatgtagcc 538  Q
    |||||| |||||| || ||||||||  ||||||||||||| |||||||||| ||||||||| | ||||| ||| | |||||||    
T  25578023 ttaagaaggatctagagattaatgaattggagaaagacatggtttttgataaaacactatggcgttgttagattcgtgtagcc 25578105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 458
Target Start/End: Complemental strand, 40980087 - 40980045
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    |||||||| ||||||||||| ||||||||||||||||||||||    
T  40980087 agaggtagaggaagacctaggaaaactataagagaaactatta 40980045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 426 - 459
Target Start/End: Complemental strand, 21517529 - 21517496
Alignment:
Q  426 gaagacctagaaaaactataagagaaactattaa 459  Q
    ||||||||||||||||||||||||||||||||||    
T  21517529 gaagacctagaaaaactataagagaaactattaa 21517496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 420 - 457
Target Start/End: Original strand, 36136891 - 36136928
Alignment:
Q  420 gtaggggaagacctagaaaaactataagagaaactatt 457  Q
    |||| |||||||||||||||||||||||||||||||||    
T  36136891 gtagaggaagacctagaaaaactataagagaaactatt 36136928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 461
Target Start/End: Complemental strand, 42177189 - 42177132
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    |||||||||| ||||||| | ||||||| ||||||| ||||||||||| |||||||||    
T  42177189 agtcaaatcattagaggtggaggaagacgtagaaaacctataagagaatctattaaga 42177132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 486
Target Start/End: Original strand, 1569137 - 1569209
Alignment:
Q  414 ctagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    ||||||| || || || ||||||||||||||||||| |||||||||||  ||||| || ||||||||| ||||    
T  1569137 ctagaggcagaggtagtcctagaaaaactataagagtaactattaagaaagatctagagattaatgagttgga 1569209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 6420661 - 6420605
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaag 460  Q
    ||||| ||||||||||| || || ||||||| ||||||||||||||| |||||||||    
T  6420661 agtcagatcactagaggcagaggtagacctataaaaactataagagatactattaag 6420605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 32368508 - 32368452
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaag 460  Q
    ||||||||||||||||| |  |||||| |||||||| ||||||||||| ||||||||    
T  32368508 agtcaaatcactagaggcaaaggaagatctagaaaatctataagagaagctattaag 32368452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 458
Target Start/End: Original strand, 38920875 - 38920935
Alignment:
Q  398 gaggtaagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    ||||||||| | ||||||||||| ||  | | |||||||||||||||||||||||||||||    
T  38920875 gaggtaagttagatcactagaggcagatgtaaacctagaaaaactataagagaaactatta 38920935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 460
Target Start/End: Original strand, 43282536 - 43282576
Alignment:
Q  420 gtaggggaagacctagaaaaactataagagaaactattaag 460  Q
    |||| ||| ||||||||||||||||||||||||||||||||    
T  43282536 gtagaggatgacctagaaaaactataagagaaactattaag 43282576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 481
Target Start/End: Complemental strand, 29653695 - 29653640
Alignment:
Q  426 gaagacctagaaaaactataagagaaactattaagagggatctggacattaatgag 481  Q
    ||||||| ||||||||| ||||||||||||||||||  ||||| || |||||||||    
T  29653695 gaagaccaagaaaaactgtaagagaaactattaagaaagatctagagattaatgag 29653640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 455
Target Start/End: Complemental strand, 36245575 - 36245524
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaacta 455  Q
    ||||| ||||||||||  || |||||||||| ||||||||||||||||||||    
T  36245575 agtcacatcactagagacagaggaagacctataaaaactataagagaaacta 36245524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 459
Target Start/End: Complemental strand, 38135384 - 38135329
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaa 459  Q
    ||||| |||| |||||| ||  ||||||||||||||| ||||||||||||||||||    
T  38135384 agtcagatcattagaggcagatgaagacctagaaaaagtataagagaaactattaa 38135329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 506
Target Start/End: Complemental strand, 38921236 - 38921157
Alignment:
Q  427 aagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgata 506  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||  |  ||||   | ||||||||||||| ||||||||||    
T  38921236 aagacctagaaaaactagaagaggaactattaagaaggatctacaggttaacaggttggagaaagacatggtttttgata 38921157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 461
Target Start/End: Original strand, 28359368 - 28359426
Alignment:
Q  404 agtcaaatcact-agaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    |||||||||||| |||||||| | ||| |||||||||| ||||||||||| ||||||||    
T  28359368 agtcaaatcacttagaggtagagaaagtcctagaaaaattataagagaaaatattaaga 28359426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 458
Target Start/End: Complemental strand, 28562525 - 28562483
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    |||||||| ||| |||||||||||| |||||||||||||||||    
T  28562525 agaggtagaggatgacctagaaaaaatataagagaaactatta 28562483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 425 - 461
Target Start/End: Original strand, 35713830 - 35713866
Alignment:
Q  425 ggaagacctagaaaaactataagagaaactattaaga 461  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  35713830 ggaagacctagaaaaactataacagaaattattaaga 35713866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 1e-30; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 404 - 540
Target Start/End: Complemental strand, 7531815 - 7531679
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    ||||| ||||||||||||| ||| |||||||||||||||||| |||||||||||| || |||||| || || |||||| ||||||||||||| |||||||    
T  7531815 agtcagatcactagaggtaagggtagacctagaaaaactatacgagaaactattaggaaggatctagagataaatgagttggagaaagacatggtttttg 7531716  T
Q  504 atataacactatgacattgtttgatccatgtagccga 540  Q
    ||| |||||||||   | ||||||| |||||||||||    
T  7531715 atagaacactatggtgtcgtttgattcatgtagccga 7531679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 405 - 516
Target Start/End: Original strand, 32043702 - 32043813
Alignment:
Q  405 gtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttga 504  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||| ||||||  | || |||||| ||||||||||||| ||||||||    
T  32043702 gtcaaatcactagaggtaggggaagacctaaaaaaactattagagaaactatcaagaaggatctaaagatcaatgagttggagaaagacatggtttttga 32043801  T
Q  505 tataacactatg 516  Q
    || |||||||||    
T  32043802 tagaacactatg 32043813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 404 - 546
Target Start/End: Original strand, 16351489 - 16351630
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    |||||| ||||| ||| |||| ||||||||||||||||||| |||||||||||||||| |||||| || ||||||||| | ||||||||||| ||||||     
T  16351489 agtcaagtcacttgagataggagaagacctagaaaaactattagagaaactattaagaaggatctagagattaatgag-ttgagaaagacatggttttta 16351587  T
Q  504 atataacactatgacattgtttgatccatgtagccgatcccac 546  Q
    ||| ||||||||| ||| ||||||| ||||||| ||| |||||    
T  16351588 atagaacactatggcatcgtttgattcatgtagacgaccccac 16351630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 410 - 546
Target Start/End: Complemental strand, 39953429 - 39953293
Alignment:
Q  410 atcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataa 509  Q
    ||||||||||||||||| |||||||| ||||||| |||||||||||||| || |||||| || || |||||| | |||||| |||| |||||||||   |    
T  39953429 atcactagaggtaggggtagacctaggaaaactaaaagagaaactattaggaaggatctagagataaatgagttagagaaaaacatggtttttgatggga 39953330  T
Q  510 cactatgacattgtttgatccatgtagccgatcccac 546  Q
    |||||||   ||||||||| ||||||||||| |||||    
T  39953329 cactatggagttgtttgattcatgtagccgaccccac 39953293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 415 - 546
Target Start/End: Complemental strand, 30812976 - 30812845
Alignment:
Q  415 tagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacacta 514  Q
    |||||||||||| ||||||||||||||||||  ||||||| ||| || |||||| || || |||||| |||| |||||||| |||||||||| |||||||    
T  30812976 tagaggtaggggtagacctagaaaaactatacaagaaactgttaggaaggatctagagataaatgagttggaaaaagacatggtttttgatagaacacta 30812877  T
Q  515 tgacattgtttgatccatgtagccgatcccac 546  Q
    ||   | ||||||| ||||||||||| |||||    
T  30812876 tggtgtcgtttgattcatgtagccgaccccac 30812845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 38178431 - 38178349
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |  || || |||||||||||| ||||    
T  38178431 agtcaaatcgctagaggtagaggaagacctagaaaaactataagagaaactattaacaaagacctagacattaatgagttgga 38178349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 10080078 - 10079996
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    |||||||||||||||||||| |||||||||||| ||||||||||| ||||| ||||||  ||||| || ||||||||| ||||    
T  10080078 agtcaaatcactagaggtagaggaagacctagagaaactataagaaaaactgttaagaaagatctagagattaatgagttgga 10079996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 416 - 546
Target Start/End: Original strand, 43733330 - 43733459
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacactat 515  Q
    |||||||| ||||||||||||||||||| ||||||||||||  ||| |||||| || ||||||||| |||| ||| |   |||||| |||| ||||||||    
T  43733330 agaggtagaggaagacctagaaaaactacaagagaaactatcgagaaggatctagagattaatgagttggataaa-aatgtgttttggatagaacactat 43733428  T
Q  516 gacattgtttgatccatgtagccgatcccac 546  Q
    | | | |||| || |||||||||||||||||    
T  43733429 ggcgtcgtttcattcatgtagccgatcccac 43733459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 404 - 458
Target Start/End: Complemental strand, 45512666 - 45512612
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  45512666 agtcaaatcactagaggcagaggaagacctagaaaaactataagagaaactatta 45512612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 427 - 516
Target Start/End: Complemental strand, 26686067 - 26685978
Alignment:
Q  427 aagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacactatg 516  Q
    ||||||||||||| |||||||||||||| |||||  ||| || || ||| ||||| ||||||||||||| |||||||||| |||||||||    
T  26686067 aagacctagaaaagctataagagaaactgttaagtaggacctagagattgatgagttggagaaagacatggtttttgatagaacactatg 26685978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 431 - 546
Target Start/End: Complemental strand, 39967643 - 39967528
Alignment:
Q  431 cctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacactatgacattgtttgatcc 530  Q
    |||||||||||||||||||||||||||||||  ||||| |  ||||||||| ||||   ||| || |||| || || |||| |||| | | |||||||||    
T  39967643 cctagaaaaactataagagaaactattaagaaagatctagcgattaatgagttggattgagatatagtttatgttagaacattatggcgtagtttgatcc 39967544  T
Q  531 atgtagccgatcccac 546  Q
    ||||||||||||||||    
T  39967543 atgtagccgatcccac 39967528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 404 - 486
Target Start/End: Original strand, 79138 - 79220
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    ||||||||||||||| | || ||||| | |||||| ||||||||||||||||||||||  ||||| || ||||||||||||||    
T  79138 agtcaaatcactagaagcagaggaaggcttagaaacactataagagaaactattaagaaagatctagagattaatgagctgga 79220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 408 - 534
Target Start/End: Original strand, 4011198 - 4011324
Alignment:
Q  408 aaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatat 507  Q
    ||||| ||||||  || |||||||||||||||||||||||||||||||||||||  |||||  | ||||||||| |||| |||||  | |  |  ||||     
T  4011198 aaatcgctagagacagaggaagacctagaaaaactataagagaaactattaagaaagatctaaagattaatgagttggataaagatgtggaatacgatag 4011297  T
Q  508 aacactatgacattgtttgatccatgt 534  Q
    |||| ||||||||||||||||| ||||    
T  4011298 aacattatgacattgtttgatcaatgt 4011324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 404 - 466
Target Start/End: Original strand, 25985629 - 25985691
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggat 466  Q
    |||||||||||||||||||| ||||||||||||||||||| | | ||||||||||||| ||||    
T  25985629 agtcaaatcactagaggtagaggaagacctagaaaaactaaatgggaaactattaagaaggat 25985691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 430 - 540
Target Start/End: Complemental strand, 30456439 - 30456329
Alignment:
Q  430 acctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacactatgacattgtttgatc 529  Q
    |||||||||||||||||||||||||||||  |  ||||| || || | | || | |||||||| ||||||||||||| ||||||||| | | |||||||     
T  30456439 acctagaaaaactataagagaaactattagaaatgatctagatataactaagttcgagaaagatattgtttttgatagaacactatggcgtcgtttgatt 30456340  T
Q  530 catgtagccga 540  Q
    |||||||||||    
T  30456339 catgtagccga 30456329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 35643777 - 35643695
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    ||||| || |||||||| || |||||||||||||||||||||||||||| ||||||||  ||||| || ||||||||| ||||    
T  35643777 agtcagattactagaggcagaggaagacctagaaaaactataagagaaattattaagaaagatctagagattaatgagttgga 35643695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 438 - 516
Target Start/End: Complemental strand, 38901956 - 38901878
Alignment:
Q  438 aaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacactatg 516  Q
    |||||||||| |||||||||| || | |||| || ||||||||  ||||||||||||| ||||||||||||||||||||    
T  38901956 aaactataagggaaactattaggaagaatctagagattaatgatttggagaaagacatggtttttgatataacactatg 38901878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 404 - 461
Target Start/End: Original strand, 2216399 - 2216456
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    ||||| |||||||||||||| ||||||||||||||||  |||||||||||||||||||    
T  2216399 agtcagatcactagaggtagaggaagacctagaaaaaacataagagaaactattaaga 2216456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 404 - 461
Target Start/End: Original strand, 37826402 - 37826459
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    ||||||||||||||||| || || ||||||||| ||||||||||||||||||||||||    
T  37826402 agtcaaatcactagaggcagagggagacctagataaactataagagaaactattaaga 37826459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 404 - 455
Target Start/End: Original strand, 29700387 - 29700438
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaacta 455  Q
    ||||| |||||||||||||| ||||||||||||||||||| |||||||||||    
T  29700387 agtcatatcactagaggtagaggaagacctagaaaaactaaaagagaaacta 29700438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 24399960 - 24399878
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    |||||||| |||||||| || | || || |||||||| |||||||||||||||||||| |||||| || ||||||||| ||||    
T  24399960 agtcaaattactagaggcagagcaaaacttagaaaaattataagagaaactattaagaaggatctcgagattaatgagttgga 24399878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 404 - 546
Target Start/End: Original strand, 32931072 - 32931213
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    ||||| ||||||||||| || |||||||||| ||||||||| ||||||||||||| ||  ||| | || ||||||||| ||||  || | || || | ||    
T  32931072 agtcatatcactagaggcagaggaagacctaaaaaaactatcagagaaactattaggaaagattttgaaattaatgagttggacgaa-atatggtgtatg 32931170  T
Q  504 atataacactatgacattgtttgatccatgtagccgatcccac 546  Q
    ||| |||| |||| |||  |||||||||||||||||| |||||    
T  32931171 atagaacattatggcataatttgatccatgtagccgaccccac 32931213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 416 - 458
Target Start/End: Original strand, 45419358 - 45419400
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  45419358 agaggtagaggaagacctagaaaaactataagagaaactatta 45419400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 408 - 540
Target Start/End: Complemental strand, 3079770 - 3079640
Alignment:
Q  408 aaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatat 507  Q
    |||||||||||||||  |||||||||||| || |||||||||||||||||||||  |||||||  ||| ||||| |||| | | | || || |||||||     
T  3079770 aaatcactagaggtaaaggaagacctagataa-ctataagagaaactattaagaaagatctggggattgatgagttggatacacatatggtatttgata- 3079673  T
Q  508 aacactatgacattgtttgatccatgtagccga 540  Q
     ||| |||||  | |||||||||||||||||||    
T  3079672 gacattatgaagtggtttgatccatgtagccga 3079640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 461
Target Start/End: Complemental strand, 16994610 - 16994558
Alignment:
Q  409 aatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    ||||||| |||| || ||||||||||||||||||||| |||||||||||||||    
T  16994610 aatcactggaggaagaggaagacctagaaaaactatatgagaaactattaaga 16994558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 417 - 457
Target Start/End: Original strand, 29709821 - 29709861
Alignment:
Q  417 gaggtaggggaagacctagaaaaactataagagaaactatt 457  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  29709821 gaggtagaggaagacctagaaaaactataagagaaactatt 29709861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 461
Target Start/End: Complemental strand, 5127435 - 5127384
Alignment:
Q  410 atcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    ||||||||||| || || || |||||||||||||||||||||||||||||||    
T  5127435 atcactagaggcagaggtaggcctagaaaaactataagagaaactattaaga 5127384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 404 - 459
Target Start/End: Complemental strand, 9905053 - 9904998
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaa 459  Q
    ||||||||||  ||||||||  |||||||||||||||||| |||||||||||||||    
T  9905053 agtcaaatcaaaagaggtagatgaagacctagaaaaactacaagagaaactattaa 9904998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 425 - 540
Target Start/End: Complemental strand, 17491804 - 17491689
Alignment:
Q  425 ggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacactatgacattgtt 524  Q
    |||||||||||||||||| ||||||||||||||||||  ||  |||| ||||||||| ||||  || | || |||| ||||| |||| |||| | |   |    
T  17491804 ggaagacctagaaaaactgtaagagaaactattaagaaagacttggagattaatgagttggaccaaaatatggtttatgatagaacattatggcgtatgt 17491705  T
Q  525 tgatccatgtagccga 540  Q
    ||||||||||||||||    
T  17491704 tgatccatgtagccga 17491689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 419 - 486
Target Start/End: Original strand, 23023351 - 23023418
Alignment:
Q  419 ggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    ||||| ||||||||||||||||||||||||||||||| |||||  |||||  | ||||||||| ||||    
T  23023351 ggtagaggaagacctagaaaaactataagagaaactactaagaaagatctacagattaatgagttgga 23023418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 404 - 467
Target Start/End: Complemental strand, 38409193 - 38409130
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatc 467  Q
    ||||||| |||| |||||||||| |||||||||||||||||| | |||||||||| || |||||    
T  38409193 agtcaaaccactggaggtaggggtagacctagaaaaactatacgcgaaactattatgaaggatc 38409130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 425 - 459
Target Start/End: Original strand, 5908778 - 5908812
Alignment:
Q  425 ggaagacctagaaaaactataagagaaactattaa 459  Q
    |||||||||||||||||||||||||||||||||||    
T  5908778 ggaagacctagaaaaactataagagaaactattaa 5908812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 458
Target Start/End: Original strand, 28169515 - 28169557
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    |||||||| |||||||||| |||||||||||||||||||||||    
T  28169515 agaggtagaggaagacctaaaaaaactataagagaaactatta 28169557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 454
Target Start/End: Original strand, 29520761 - 29520810
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaact 454  Q
    ||||||||||| |||||||| ||||| ||||||||||||||||||||||||    
T  29520761 agtcaaatcacaagaggtagaggaag-cctagaaaaactataagagaaact 29520810  T

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Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 30783213 - 30783131
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    ||||| ||||||||||| || |||||| |||| ||||| ||||||||||||||| |||  ||||| || ||||||||| ||||    
T  30783213 agtcagatcactagaggcagaggaagatctagtaaaaccataagagaaactatttagaaagatctagagattaatgagttgga 30783131  T

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Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 35362821 - 35362739
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    ||||||||| ||| ||| || ||||||||||||||||||||  |||||||||||| ||  ||| |||| ||||||||| ||||    
T  35362821 agtcaaatccctataggcagaggaagacctagaaaaactatcggagaaactattaggaaagatttggaaattaatgagttgga 35362739  T

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Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 411 - 461
Target Start/End: Complemental strand, 41444506 - 41444454
Alignment:
Q  411 tcactagaggtaggggaagacctagaaaaa--ctataagagaaactattaaga 461  Q
    |||||||||| || ||||||||||||||||  |||||||||||||||||||||    
T  41444506 tcactagaggcagaggaagacctagaaaaaaactataagagaaactattaaga 41444454  T

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Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 480
Target Start/End: Original strand, 9070099 - 9070175
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatga 480  Q
    |||||||| ||||||   ||| ||||||||||||||||||||||| ||||||||| ||  ||||| || ||||||||    
T  9070099 agtcaaataactagatacaggtgaagacctagaaaaactataagaaaaactattatgatagatctagagattaatga 9070175  T

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Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 540
Target Start/End: Original strand, 24558610 - 24558730
Alignment:
Q  420 gtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacactatgaca 519  Q
    |||| |||||||| |||||||| |||||||||| ||||||||  ||| | || ||||||||||||||   || ||| |||   |||| |||| ||||||     
T  24558610 gtagaggaagaccgagaaaaacaataagagaaattattaagaaagatttagagattaatgagctggactgagtcatggttaacgatagaacattatgacg 24558709  T
Q  520 ttgtttgatccatgtagccga 540  Q
    |  ||||||||||||||||||    
T  24558710 taatttgatccatgtagccga 24558730  T

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Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 540
Target Start/End: Complemental strand, 43904836 - 43904700
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttg 503  Q
    |||||||| || |||||||  |||||||||||||| ||||||||||||||  ||| ||| ||| | || ||||||||| ||||   | | || |||| ||    
T  43904836 agtcaaattacaagaggtacaggaagacctagaaatactataagagaaacggttatgagagatttagagattaatgagttggatctaaatatggtttatg 43904737  T
Q  504 atataacactatgacattgtttgatccatgtagccga 540  Q
    ||| |||| |||| | |  ||||||||||||||||||    
T  43904736 atagaacattatggcgtaatttgatccatgtagccga 43904700  T

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Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 459
Target Start/End: Complemental strand, 33827916 - 33827873
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactattaa 459  Q
    ||||||| |||||||| || ||||||||||||||||||||||||    
T  33827916 agaggtacgggaagacgtataaaaactataagagaaactattaa 33827873  T

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Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 458
Target Start/End: Original strand, 13589602 - 13589644
Alignment:
Q  416 agaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    ||||||||  |||||| ||||||||||||||||||||||||||    
T  13589602 agaggtagatgaagacttagaaaaactataagagaaactatta 13589644  T

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Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 408 - 466
Target Start/End: Complemental strand, 16971921 - 16971863
Alignment:
Q  408 aaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggat 466  Q
    ||||||||||| | | ||||| || ||||||||||||||||||||| ||||||| ||||    
T  16971921 aaatcactagatgcacgggaaaacttagaaaaactataagagaaacgattaagaaggat 16971863  T

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Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 486
Target Start/End: Complemental strand, 30198429 - 30198355
Alignment:
Q  412 cactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    ||||||||| || || |||| |||||||||||||||||||| ||||||||  ||| | || ||||||||| ||||    
T  30198429 cactagaggcagaggtagacttagaaaaactataagagaaattattaagaaagatattgagattaatgagttgga 30198355  T

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Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 458
Target Start/End: Complemental strand, 35914772 - 35914718
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    ||||| ||| ||||||  || ||||||| ||||||||||||||||||||||||||    
T  35914772 agtcagatccctagagacagaggaagacatagaaaaactataagagaaactatta 35914718  T

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Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 27037747 - 27037800
Alignment:
Q  405 gtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 458  Q
    ||||||||||||| ||||| | ||||||||| ||||||||| || |||||||||    
T  27037747 gtcaaatcactagtggtagagaaagacctagtaaaactatacgataaactatta 27037800  T

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Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 461
Target Start/End: Original strand, 30748568 - 30748625
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 461  Q
    |||||||||||||||   || ||||||||| |||||||  ||||||||||||||||||    
T  30748568 agtcaaatcactagaatcagaggaagaccttgaaaaaccgtaagagaaactattaaga 30748625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 486
Target Start/End: Original strand, 39388907 - 39388976
Alignment:
Q  418 aggtaggggaagacctagaaaaactat-aagagaaactattaagagggatctggacattaatgagctgga 486  Q
    |||||| ||| |||||||||||||||| |||||||||||||| ||  ||||| || ||||||||| ||||    
T  39388907 aggtagaggaggacctagaaaaactataaagagaaactattaggaaagatctagagattaatgagttgga 39388976  T

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Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 425 - 457
Target Start/End: Original strand, 14903693 - 14903725
Alignment:
Q  425 ggaagacctagaaaaactataagagaaactatt 457  Q
    |||||||||||||||||||||||||| ||||||    
T  14903693 ggaagacctagaaaaactataagagagactatt 14903725  T

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Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 456
Target Start/End: Original strand, 16917294 - 16917346
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactat 456  Q
    ||||||||||||| ||||||  |||||||||||||| ||||| | ||||||||    
T  16917294 agtcaaatcactacaggtagaagaagacctagaaaagctataggtgaaactat 16917346  T

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Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 452
Target Start/End: Complemental strand, 25985771 - 25985723
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaa 452  Q
    ||||| ||| ||||||||||||| ||| ||||||||| |||||||||||    
T  25985771 agtcagatcgctagaggtaggggtagatctagaaaaaatataagagaaa 25985723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 426 - 458
Target Start/End: Complemental strand, 28269827 - 28269795
Alignment:
Q  426 gaagacctagaaaaactataagagaaactatta 458  Q
    ||||||||||||||| |||||||||||||||||    
T  28269827 gaagacctagaaaaattataagagaaactatta 28269795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 425 - 461
Target Start/End: Complemental strand, 38392043 - 38392007
Alignment:
Q  425 ggaagacctagaaaaactataagagaaactattaaga 461  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  38392043 ggaagacctagaaaaactatatgagaaaccattaaga 38392007  T

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Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 545
Target Start/End: Complemental strand, 42854082 - 42854034
Alignment:
Q  497 gtttttgatataacactatgacattgtttgatccatgtagccgatccca 545  Q
    |||||||||||||||||||| | |  |||||||||||||||||| ||||    
T  42854082 gtttttgatataacactatggcgtcatttgatccatgtagccgacccca 42854034  T

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Target: scaffold0325 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 408 - 481
Target Start/End: Original strand, 11912 - 11985
Alignment:
Q  408 aaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgag 481  Q
    ||||||||||||| |   ||||| |||||||||||||||||||||||||||||| |||||| || |||||||||    
T  11912 aaatcactagaggcaaaagaagaactagaaaaactataagagaaactattaagaaggatctagagattaatgag 11985  T

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Target: scaffold0018 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 178591 - 178509
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctgga 486  Q
    ||||| |||||||||||  | | |||||||||||||||||||||||||||||||||||  ||| | || ||||||||| ||||    
T  178591 agtcatatcactagaggcggagtaagacctagaaaaactataagagaaactattaagaaagatatagagattaatgagttgga 178509  T

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Target: scaffold0018; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 452
Target Start/End: Complemental strand, 44039 - 43991
Alignment:
Q  404 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaa 452  Q
    ||||| |||||||||||||||||| | |||| |||||||||||| ||||    
T  44039 agtcagatcactagaggtaggggaggtcctacaaaaactataagtgaaa 43991  T

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Target: scaffold1609 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1609
Description:

Target: scaffold1609; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 468
Target Start/End: Complemental strand, 1111 - 1060
Alignment:
Q  417 gaggtaggggaagacctagaaaaactataagagaaactattaagagggatct 468  Q
    ||||||||||  |||||||||||||| ||||||||||||||| || ||||||    
T  1111 gaggtaggggtggacctagaaaaactgtaagagaaactattaggaaggatct 1060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 414 - 540
Target Start/End: Complemental strand, 58387 - 58261
Alignment:
Q  414 ctagaggtaggggaagacctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacact 513  Q
    ||||||| || ||||||||||||||||| |||||||||||| ||| ||   |  |||| || |||||| ||||  |||| || |||| ||||| |||| |    
T  58387 ctagaggcagaggaagacctagaaaaacgataagagaaactgttaggaaaaacttggagatcaatgagttggaccaagatatggtttatgatagaacatt 58288  T
Q  514 atgacattgtttgatccatgtagccga 540  Q
    ||| | |  ||||||||||||||||||    
T  58287 atgtcgtaatttgatccatgtagccga 58261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 430 - 540
Target Start/End: Complemental strand, 163338 - 163229
Alignment:
Q  430 acctagaaaaactataagagaaactattaagagggatctggacattaatgagctggagaaagacattgtttttgatataacactatgacattgtttgatc 529  Q
    |||||||||||| | |||||||||||||| || | || |  | || |||||| | ||||||| ||||| |||||||| ||||||||||| | |||||||     
T  163338 acctagaaaaaccacaagagaaactattatgaagtatttaaagataaatgagtttgagaaag-cattgattttgatagaacactatgacgtcgtttgatt 163240  T
Q  530 catgtagccga 540  Q
    ||| |||||||    
T  163239 catatagccga 163229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1259 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1259
Description:

Target: scaffold1259; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 458
Target Start/End: Complemental strand, 1665 - 1636
Alignment:
Q  429 gacctagaaaaactataagagaaactatta 458  Q
    ||||||||||||||||||||||||||||||    
T  1665 gacctagaaaaactataagagaaactatta 1636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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