View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18388_low_13 (Length: 335)
Name: NF18388_low_13
Description: NF18388
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18388_low_13 |
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Alignment Details
Target: chr2 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 19 - 292
Target Start/End: Original strand, 4097880 - 4098152
Alignment:
| Q |
19 |
tggaaaacgactgatacgttacttcactgttattgttggtggtttgtatgccttttgtaacatgcaactgaaaatcatgttctgggattgtgatgtgtgc |
118 |
Q |
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| T |
4097880 |
tggaaaacgactgatacgttacttcactgttattgttggtggtttgtatgccttttgtaacatgcaactgaaaatcatgttctgggattgtgatgtgtgc |
4097979 |
T |
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| Q |
119 |
tatgaacatgtttcttttaacannnnnnnagccttcaatattttattggataaaattaaccgtatctttcatatttttaaaatgaatttcatataaaata |
218 |
Q |
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| T |
4097980 |
tatgaacatgttt-ttttaacatttttttagccttcaatattttattggataaaattaaccgtatctttcatatttttaaaatgaatttcatataaaata |
4098078 |
T |
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| Q |
219 |
gtgagatcaacataaattgcattcaataaaatgttaaaagttaaaaacagagtgttttgattactactattact |
292 |
Q |
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||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||| |
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| T |
4098079 |
gtgagatcaacataaattgcattcaataaaatgataaatgttaaaaacagagtgttttggttactactattact |
4098152 |
T |
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