View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18391_high_19 (Length: 284)
Name: NF18391_high_19
Description: NF18391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18391_high_19 |
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Alignment Details
Target: chr2 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 7685012 - 7685283
Alignment:
| Q |
1 |
tagttgtgtgttttaccttgaccacaaattggtatagaacggtctcttccatgctactgatgttaagatgaagaacttcaaatgaaagactttctaaaac |
100 |
Q |
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| T |
7685012 |
tagttgtgtgttttaccttgaccacaaattggtatagaacggtctcttccatgctactgatgttaagatgaagaacttcaaatgaaagactttctaaaac |
7685111 |
T |
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| Q |
101 |
agttataatccttgaaacttgaccaggaattctttgagaaatcactttcaaaatcacatttggacccgaaattttcacttctacatctgcaattgaagag |
200 |
Q |
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| T |
7685112 |
agttataatccttgaaacttgaccaggaattctttgagaaatcactttcaaaatcacatttggacccgaaattttcacttctacatctgcaattgaagag |
7685211 |
T |
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| Q |
201 |
ttgcagcttgctcctagttccttgaaagcattattagtcccaattccaccagaagagatatcacattgatga |
272 |
Q |
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| T |
7685212 |
ttgcagcttgctcctagttccttgaaagcattattagtcccaattcctccggaggagatatcaaattgatga |
7685283 |
T |
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