View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18391_low_31 (Length: 240)

Name: NF18391_low_31
Description: NF18391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18391_low_31
NF18391_low_31
[»] chr2 (52 HSPs)
chr2 (67-222)||(32781268-32781424)
chr2 (90-222)||(21377076-21377209)
chr2 (90-220)||(8455318-8455450)
chr2 (90-220)||(17668003-17668135)
chr2 (92-222)||(33795284-33795415)
chr2 (90-222)||(10546161-10546296)
chr2 (90-222)||(10543697-10543833)
chr2 (90-220)||(17623565-17623697)
chr2 (90-222)||(9671180-9671312)
chr2 (90-222)||(14530317-14530453)
chr2 (90-222)||(24200625-24200761)
chr2 (107-222)||(99285-99399)
chr2 (90-187)||(25632544-25632642)
chr2 (118-219)||(22371059-22371158)
chr2 (130-222)||(44521416-44521509)
chr2 (98-220)||(11514437-11514560)
chr2 (131-222)||(12023963-12024054)
chr2 (90-220)||(14444730-14444861)
chr2 (131-222)||(23145742-23145834)
chr2 (131-222)||(23557532-23557624)
chr2 (90-220)||(25249740-25249871)
chr2 (90-179)||(27573663-27573753)
chr2 (90-187)||(40762236-40762334)
chr2 (91-187)||(4516354-4516451)
chr2 (90-222)||(17380240-17380372)
chr2 (107-222)||(17896258-17896375)
chr2 (90-222)||(21779263-21779395)
chr2 (90-220)||(25079719-25079852)
chr2 (90-182)||(44643563-44643656)
chr2 (132-222)||(5450284-5450376)
chr2 (107-222)||(19977734-19977850)
chr2 (107-222)||(31821363-31821477)
chr2 (90-180)||(36871534-36871624)
chr2 (132-222)||(12315697-12315787)
chr2 (90-222)||(23397765-23397897)
chr2 (148-222)||(29419946-29420025)
chr2 (131-222)||(25641501-25641592)
chr2 (137-220)||(40416921-40417005)
chr2 (132-220)||(39914350-39914440)
chr2 (131-220)||(5841029-5841121)
chr2 (107-222)||(45235837-45235954)
chr2 (107-206)||(30826052-30826150)
chr2 (152-222)||(7214533-7214604)
chr2 (131-182)||(24890451-24890502)
chr2 (107-182)||(26684640-26684715)
chr2 (107-184)||(31158459-31158538)
chr2 (90-187)||(15296408-15296507)
chr2 (107-222)||(19614991-19615108)
chr2 (107-174)||(38589940-38590007)
chr2 (131-181)||(44449427-44449478)
chr2 (131-173)||(13245139-13245181)
chr2 (98-169)||(24859998-24860070)
[»] chr8 (50 HSPs)
chr8 (97-220)||(44530150-44530275)
chr8 (90-215)||(5135292-5135418)
chr8 (90-220)||(28817628-28817760)
chr8 (90-220)||(36720797-36720929)
chr8 (97-220)||(29521694-29521819)
chr8 (90-187)||(29877129-29877227)
chr8 (99-187)||(24365071-24365160)
chr8 (90-222)||(39460996-39461132)
chr8 (107-210)||(8483958-8484062)
chr8 (90-220)||(35261680-35261812)
chr8 (131-222)||(12670294-12670384)
chr8 (98-187)||(5689666-5689756)
chr8 (90-222)||(17823575-17823709)
chr8 (108-220)||(13160703-13160815)
chr8 (133-220)||(44742564-44742653)
chr8 (90-219)||(12625891-12626023)
chr8 (107-222)||(36918123-36918239)
chr8 (90-220)||(45071266-45071397)
chr8 (90-222)||(42083700-42083835)
chr8 (131-220)||(8897808-8897898)
chr8 (131-220)||(7136571-7136663)
chr8 (90-222)||(30454099-30454231)
chr8 (90-222)||(44781506-44781642)
chr8 (124-222)||(2626518-2626620)
chr8 (133-220)||(6760823-6760913)
chr8 (130-220)||(26954133-26954227)
chr8 (109-222)||(31457172-31457285)
chr8 (98-225)||(389639-389770)
chr8 (131-222)||(22598156-22598248)
chr8 (132-222)||(35105922-35106014)
chr8 (132-187)||(20869958-20870015)
chr8 (131-180)||(19729382-19729431)
chr8 (97-222)||(20284078-20284209)
chr8 (90-182)||(11000952-11001044)
chr8 (92-222)||(18164764-18164895)
chr8 (97-222)||(21070706-21070838)
chr8 (125-220)||(25250523-25250621)
chr8 (130-181)||(43942365-43942418)
chr8 (90-182)||(10857869-10857962)
chr8 (99-210)||(40604917-40605029)
chr8 (132-222)||(14018013-14018105)
chr8 (131-222)||(20869544-20869632)
chr8 (107-187)||(17250895-17250977)
chr8 (137-180)||(23286375-23286418)
chr8 (131-185)||(16225056-16225112)
chr8 (90-154)||(28407471-28407536)
chr8 (135-175)||(26457776-26457816)
chr8 (131-181)||(23000263-23000313)
chr8 (161-222)||(30962847-30962909)
chr8 (90-158)||(26102581-26102650)
[»] chr3 (59 HSPs)
chr3 (90-220)||(40272814-40272946)
chr3 (90-222)||(53996567-53996702)
chr3 (88-222)||(26573148-26573284)
chr3 (90-222)||(45139480-45139614)
chr3 (90-222)||(13628792-13628928)
chr3 (90-221)||(29366722-29366857)
chr3 (124-222)||(12914072-12914171)
chr3 (90-222)||(34420645-34420780)
chr3 (107-221)||(46421055-46421172)
chr3 (90-220)||(22609789-22609920)
chr3 (90-222)||(26869728-26869861)
chr3 (90-222)||(1217111-1217243)
chr3 (131-222)||(54374389-54374482)
chr3 (90-182)||(54484753-54484846)
chr3 (98-220)||(45948848-45948972)
chr3 (137-220)||(54032609-54032693)
chr3 (90-222)||(516430-516567)
chr3 (107-222)||(8247707-8247825)
chr3 (90-220)||(13730604-13730738)
chr3 (90-180)||(15797284-15797375)
chr3 (90-180)||(34771366-34771457)
chr3 (99-219)||(6411833-6411954)
chr3 (106-222)||(30928166-30928283)
chr3 (131-217)||(16735467-16735553)
chr3 (131-222)||(22122961-22123051)
chr3 (90-222)||(25944490-25944625)
chr3 (118-181)||(47624104-47624167)
chr3 (137-187)||(4495714-4495764)
chr3 (90-210)||(31592882-31593002)
chr3 (90-222)||(39203537-39203669)
chr3 (90-187)||(45786216-45786316)
chr3 (90-186)||(353351-353450)
chr3 (92-187)||(19731059-19731155)
chr3 (132-215)||(10795468-10795554)
chr3 (131-210)||(14986990-14987072)
chr3 (131-187)||(49013517-49013575)
chr3 (107-220)||(7943013-7943127)
chr3 (142-187)||(9276321-9276366)
chr3 (125-210)||(9607236-9607324)
chr3 (90-185)||(31904858-31904955)
chr3 (92-187)||(55401233-55401330)
chr3 (140-222)||(45620881-45620965)
chr3 (90-172)||(52926221-52926304)
chr3 (92-187)||(44403559-44403656)
chr3 (145-221)||(7696945-7697020)
chr3 (132-222)||(33926104-33926195)
chr3 (136-222)||(52428526-52428614)
chr3 (124-186)||(8410904-8410966)
chr3 (128-221)||(29106571-29106665)
chr3 (90-222)||(5173721-5173856)
chr3 (90-182)||(25517172-25517265)
chr3 (92-187)||(19751635-19751731)
chr3 (148-222)||(1121286-1121361)
chr3 (160-222)||(10870025-10870087)
chr3 (135-182)||(33235594-33235641)
chr3 (98-213)||(829452-829570)
chr3 (90-187)||(50624955-50625053)
chr3 (137-211)||(43114918-43114995)
chr3 (124-180)||(26292394-26292450)
[»] chr7 (61 HSPs)
chr7 (90-222)||(18747485-18747620)
chr7 (90-220)||(7879639-7879771)
chr7 (97-222)||(2541028-2541155)
chr7 (90-222)||(42391102-42391234)
chr7 (131-222)||(27629633-27629725)
chr7 (91-187)||(28362149-28362245)
chr7 (107-222)||(33871930-33872045)
chr7 (132-222)||(11617633-11617724)
chr7 (90-222)||(18512455-18512588)
chr7 (90-222)||(19265814-19265946)
chr7 (90-222)||(32233137-32233270)
chr7 (90-187)||(14099009-14099106)
chr7 (90-187)||(14409026-14409123)
chr7 (90-222)||(21172011-21172143)
chr7 (131-220)||(46354195-46354287)
chr7 (90-220)||(47716460-47716594)
chr7 (131-220)||(42798670-42798760)
chr7 (90-222)||(48735124-48735257)
chr7 (97-220)||(35334825-35334948)
chr7 (131-222)||(10693117-10693207)
chr7 (131-222)||(31591153-31591243)
chr7 (90-220)||(42805525-42805659)
chr7 (137-222)||(19426939-19427025)
chr7 (132-221)||(23419719-23419809)
chr7 (90-222)||(32758260-32758392)
chr7 (114-217)||(15108424-15108527)
chr7 (90-222)||(43557471-43557608)
chr7 (130-217)||(8148988-8149077)
chr7 (108-181)||(40463917-40463990)
chr7 (108-184)||(19266488-19266564)
chr7 (90-222)||(29907418-29907551)
chr7 (107-209)||(34626228-34626330)
chr7 (97-181)||(38604567-38604653)
chr7 (95-210)||(21566446-21566564)
chr7 (131-222)||(11741794-11741884)
chr7 (90-222)||(13805101-13805233)
chr7 (99-187)||(23231592-23231681)
chr7 (90-170)||(27889318-27889399)
chr7 (109-222)||(47077877-47077989)
chr7 (134-222)||(48123531-48123620)
chr7 (131-187)||(1408492-1408548)
chr7 (132-222)||(7644955-7645047)
chr7 (90-222)||(16341277-16341412)
chr7 (98-220)||(38262206-38262330)
chr7 (132-180)||(42476913-42476961)
chr7 (107-222)||(35203438-35203556)
chr7 (137-210)||(2662985-2663057)
chr7 (148-222)||(12473303-12473378)
chr7 (97-187)||(22698976-22699070)
chr7 (131-182)||(28078176-28078227)
chr7 (107-182)||(3469195-3469272)
chr7 (131-181)||(35787313-35787363)
chr7 (98-169)||(36267827-36267900)
chr7 (90-170)||(39123945-39124028)
chr7 (98-185)||(14732831-14732920)
chr7 (131-185)||(17048859-17048914)
chr7 (90-186)||(13792152-13792250)
chr7 (107-181)||(21139768-21139842)
chr7 (90-222)||(22065587-22065720)
chr7 (142-222)||(6736889-6736969)
chr7 (108-144)||(12268024-12268060)
[»] chr1 (71 HSPs)
chr1 (91-220)||(46991828-46991959)
chr1 (90-222)||(46247955-46248089)
chr1 (91-222)||(18724549-18724681)
chr1 (124-222)||(32632594-32632692)
chr1 (107-220)||(23768340-23768454)
chr1 (90-222)||(11596535-11596667)
chr1 (90-184)||(4349699-4349794)
chr1 (96-222)||(44485118-44485245)
chr1 (86-221)||(39214956-39215094)
chr1 (90-222)||(35005145-35005281)
chr1 (97-222)||(14617060-14617187)
chr1 (90-222)||(18944665-18944802)
chr1 (90-220)||(20004092-20004226)
chr1 (99-177)||(15505632-15505710)
chr1 (109-222)||(25468285-25468399)
chr1 (90-222)||(10668247-10668383)
chr1 (131-220)||(30395770-30395862)
chr1 (90-222)||(34725100-34725232)
chr1 (124-187)||(41319843-41319906)
chr1 (124-222)||(47214533-47214630)
chr1 (90-222)||(6983813-6983945)
chr1 (99-220)||(6925124-6925247)
chr1 (131-222)||(12126881-12126971)
chr1 (131-222)||(19932797-19932888)
chr1 (97-212)||(31442398-31442517)
chr1 (131-222)||(35253231-35253321)
chr1 (91-180)||(10378738-10378828)
chr1 (90-179)||(43768205-43768295)
chr1 (97-182)||(18741966-18742054)
chr1 (133-222)||(38478328-38478416)
chr1 (92-180)||(45812541-45812630)
chr1 (91-166)||(45402175-45402251)
chr1 (98-222)||(2435796-2435923)
chr1 (90-180)||(19414502-19414593)
chr1 (93-222)||(20036242-20036373)
chr1 (131-222)||(27201669-27201763)
chr1 (90-183)||(1517313-1517407)
chr1 (90-187)||(15511150-15511251)
chr1 (90-187)||(20999852-20999950)
chr1 (123-181)||(21910685-21910743)
chr1 (90-187)||(23796523-23796621)
chr1 (144-209)||(24564379-24564445)
chr1 (132-220)||(27136696-27136786)
chr1 (98-222)||(27474303-27474428)
chr1 (132-181)||(31382259-31382308)
chr1 (107-206)||(43207533-43207634)
chr1 (107-222)||(45264419-45264536)
chr1 (141-220)||(4430080-4430160)
chr1 (92-222)||(22327121-22327250)
chr1 (97-222)||(9939483-9939613)
chr1 (90-222)||(19974076-19974210)
chr1 (131-222)||(35117810-35117904)
chr1 (98-181)||(42304217-42304303)
chr1 (90-187)||(8197101-8197199)
chr1 (132-187)||(17470390-17470446)
chr1 (92-222)||(35019252-35019383)
chr1 (132-222)||(22930114-22930203)
chr1 (93-222)||(23371146-23371275)
chr1 (149-219)||(50760288-50760359)
chr1 (107-164)||(4249463-4249520)
chr1 (107-164)||(4249787-4249844)
chr1 (107-164)||(4250111-4250168)
chr1 (90-210)||(22324927-22325049)
chr1 (90-222)||(50811961-50812096)
chr1 (90-187)||(19701628-19701727)
chr1 (124-181)||(6358185-6358243)
chr1 (141-222)||(31272429-31272510)
chr1 (100-157)||(30682900-30682957)
chr1 (142-187)||(34679274-34679319)
chr1 (136-222)||(33223006-33223093)
chr1 (139-182)||(46859129-46859173)
[»] chr4 (66 HSPs)
chr4 (98-222)||(19027847-19027973)
chr4 (90-222)||(35567169-35567303)
chr4 (91-222)||(17043398-17043530)
chr4 (90-222)||(25463121-25463254)
chr4 (131-222)||(47443956-47444048)
chr4 (91-222)||(54967020-54967151)
chr4 (90-222)||(6430628-6430761)
chr4 (108-220)||(5648260-5648372)
chr4 (90-222)||(20224983-20225115)
chr4 (90-222)||(47528532-47528664)
chr4 (90-187)||(20639660-20639759)
chr4 (131-222)||(48598869-48598959)
chr4 (90-187)||(25629084-25629182)
chr4 (90-222)||(44363132-44363268)
chr4 (131-222)||(9832357-9832447)
chr4 (90-222)||(30639379-30639512)
chr4 (90-183)||(30690178-30690272)
chr4 (90-187)||(51865040-51865138)
chr4 (114-222)||(5306691-5306799)
chr4 (90-222)||(29207900-29208032)
chr4 (134-222)||(37494850-37494939)
chr4 (108-220)||(40915830-40915942)
chr4 (108-180)||(49796839-49796911)
chr4 (90-220)||(16408603-16408737)
chr4 (97-219)||(32478801-32478918)
chr4 (132-209)||(9987879-9987957)
chr4 (107-220)||(14983835-14983949)
chr4 (91-220)||(21646965-21647098)
chr4 (91-210)||(36589754-36589876)
chr4 (110-222)||(7385499-7385612)
chr4 (124-181)||(7909318-7909375)
chr4 (90-187)||(23501822-23501922)
chr4 (130-222)||(41018837-41018929)
chr4 (92-222)||(3580845-3580972)
chr4 (90-183)||(20908638-20908733)
chr4 (131-221)||(16911562-16911655)
chr4 (90-181)||(54175104-54175198)
chr4 (125-187)||(13256437-13256501)
chr4 (131-221)||(30581509-30581602)
chr4 (140-222)||(487187-487271)
chr4 (107-209)||(21489099-21489203)
chr4 (131-178)||(8473666-8473713)
chr4 (132-210)||(17079696-17079775)
chr4 (131-185)||(47441574-47441628)
chr4 (90-222)||(11054150-11054282)
chr4 (162-222)||(42164224-42164284)
chr4 (91-187)||(25343222-25343321)
chr4 (99-221)||(54730249-54730376)
chr4 (90-177)||(20225119-20225209)
chr4 (143-222)||(39077852-39077930)
chr4 (138-210)||(39029111-39029185)
chr4 (124-185)||(10277794-10277855)
chr4 (133-182)||(12711495-12711544)
chr4 (131-187)||(35894505-35894562)
chr4 (125-187)||(48327801-48327865)
chr4 (138-182)||(14590878-14590922)
chr4 (107-180)||(16494259-16494334)
chr4 (150-209)||(51420586-51420646)
chr4 (131-182)||(4222072-4222123)
chr4 (90-148)||(21003410-21003468)
chr4 (90-159)||(38786672-38786742)
chr4 (90-179)||(55766468-55766558)
chr4 (90-181)||(36816386-36816479)
chr4 (123-222)||(44357219-44357320)
chr4 (90-149)||(38755910-38755970)
chr4 (163-222)||(43035247-43035307)
[»] chr6 (37 HSPs)
chr6 (90-222)||(12221916-12222053)
chr6 (90-222)||(29355857-29355993)
chr6 (90-222)||(2166412-2166548)
chr6 (90-222)||(2178045-2178181)
chr6 (90-222)||(1346963-1347095)
chr6 (90-222)||(1354759-1354891)
chr6 (91-222)||(13904984-13905115)
chr6 (97-222)||(3815086-3815213)
chr6 (90-222)||(7947373-7947508)
chr6 (109-221)||(14553511-14553626)
chr6 (107-221)||(18277213-18277328)
chr6 (137-216)||(33138838-33138918)
chr6 (136-187)||(1941890-1941941)
chr6 (90-222)||(12889425-12889560)
chr6 (126-221)||(28007628-28007722)
chr6 (160-222)||(17448323-17448386)
chr6 (90-180)||(26097200-26097291)
chr6 (131-184)||(15866083-15866134)
chr6 (90-150)||(12885985-12886046)
chr6 (90-181)||(18254559-18254651)
chr6 (107-210)||(32579437-32579540)
chr6 (132-182)||(15865902-15865950)
chr6 (90-180)||(25557765-25557856)
chr6 (117-222)||(20400666-20400772)
chr6 (134-222)||(32068095-32068182)
chr6 (154-222)||(8409242-8409311)
chr6 (133-222)||(9161122-9161213)
chr6 (90-149)||(6808468-6808528)
chr6 (111-210)||(12228369-12228469)
chr6 (167-222)||(17432339-17432395)
chr6 (107-222)||(32728177-32728292)
chr6 (131-222)||(24097580-24097668)
chr6 (90-158)||(13267789-13267858)
chr6 (133-222)||(23240870-23240958)
chr6 (108-164)||(383781-383837)
chr6 (151-183)||(14341134-14341166)
chr6 (150-182)||(27855500-27855532)
[»] scaffold0057 (4 HSPs)
scaffold0057 (90-220)||(46832-46964)
scaffold0057 (107-187)||(24792-24872)
scaffold0057 (134-180)||(43699-43745)
scaffold0057 (107-175)||(46727-46796)
[»] chr5 (43 HSPs)
chr5 (90-220)||(24448891-24449023)
chr5 (90-222)||(38879580-38879716)
chr5 (95-222)||(39301122-39301251)
chr5 (90-210)||(24323708-24323829)
chr5 (90-210)||(24360332-24360453)
chr5 (90-222)||(32703423-32703555)
chr5 (107-218)||(43574609-43574721)
chr5 (107-222)||(27328751-27328869)
chr5 (90-182)||(3771379-3771472)
chr5 (131-222)||(8170028-8170118)
chr5 (132-220)||(41014320-41014408)
chr5 (130-217)||(41425952-41426040)
chr5 (90-222)||(43334201-43334337)
chr5 (131-220)||(4619148-4619240)
chr5 (90-181)||(7097762-7097854)
chr5 (131-210)||(19142987-19143066)
chr5 (124-222)||(28516470-28516570)
chr5 (97-187)||(16880656-16880747)
chr5 (90-187)||(29334430-29334529)
chr5 (131-222)||(35710312-35710402)
chr5 (148-222)||(42924895-42924970)
chr5 (90-222)||(1565430-1565564)
chr5 (91-180)||(7368438-7368528)
chr5 (131-220)||(22600455-22600545)
chr5 (93-222)||(34074569-34074698)
chr5 (133-221)||(2838779-2838867)
chr5 (131-187)||(13801811-13801869)
chr5 (131-176)||(34154858-34154903)
chr5 (92-183)||(30006364-30006456)
chr5 (132-221)||(208972-209062)
chr5 (131-187)||(20135639-20135697)
chr5 (90-222)||(12006330-12006466)
chr5 (132-220)||(1405188-1405277)
chr5 (90-158)||(16957378-16957447)
chr5 (162-220)||(23974781-23974840)
chr5 (90-181)||(22907867-22907959)
chr5 (92-147)||(39801591-39801647)
chr5 (132-222)||(1850639-1850729)
chr5 (90-179)||(12575662-12575753)
chr5 (164-222)||(22025542-22025601)
chr5 (160-222)||(37024629-37024690)
chr5 (124-172)||(11657736-11657785)
chr5 (131-171)||(12477164-12477205)
[»] scaffold0167 (1 HSPs)
scaffold0167 (102-210)||(23610-23719)
[»] scaffold0049 (1 HSPs)
scaffold0049 (90-222)||(58976-59112)
[»] scaffold0311 (1 HSPs)
scaffold0311 (107-220)||(10811-10925)
[»] scaffold0258 (1 HSPs)
scaffold0258 (90-222)||(13026-13159)
[»] scaffold0168 (1 HSPs)
scaffold0168 (90-222)||(30578-30710)
[»] scaffold0015 (1 HSPs)
scaffold0015 (90-180)||(48636-48727)
[»] scaffold0187 (2 HSPs)
scaffold0187 (131-222)||(10094-10184)
scaffold0187 (131-222)||(20422-20512)
[»] scaffold0254 (1 HSPs)
scaffold0254 (122-222)||(4156-4260)
[»] scaffold0954 (1 HSPs)
scaffold0954 (99-187)||(3579-3668)
[»] scaffold0036 (1 HSPs)
scaffold0036 (132-180)||(35062-35110)
[»] scaffold1176 (1 HSPs)
scaffold1176 (131-222)||(1631-1721)
[»] scaffold0223 (1 HSPs)
scaffold0223 (131-222)||(11130-11220)
[»] scaffold0180 (1 HSPs)
scaffold0180 (131-174)||(24177-24220)
[»] scaffold0018 (1 HSPs)
scaffold0018 (90-217)||(72869-72999)
[»] scaffold0005 (1 HSPs)
scaffold0005 (138-182)||(226456-226500)


Alignment Details
Target: chr2 (Bit Score: 97; Significance: 8e-48; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 67 - 222
Target Start/End: Original strand, 32781268 - 32781424
Alignment:
Q  67 ttcagaatgagtaatttagctagagggcagcccggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcag 166  Q
    ||||||||| |||||| ||||| | || |||| |||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||| |||||||    
T  32781268 ttcagaatgggtaattaagctaaaagggagcctggtgcacaaagctcccgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcag 32781367  T
Q  167 ccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
     ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||    
T  32781368 tcttaccctgttttttacacaagaggttgtttccgagacttgaactcgtgacctttc 32781424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 21377076 - 21377209
Alignment:
Q  90 agggcagcccggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-ag 188  Q
    |||||||| |||||||||||||||||||||||  |||||| |||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||| ||    
T  21377076 agggcagctcggtgcacaaagctcccacatacgcagggttcgggaaggggtcccaccatttggtgcattgtacccagccttaccctgttttttacacaag 21377175  T
Q  189 aagttgtttccaagacttgaactcgtgacctttc 222  Q
    | | |||||| | ||||||||||||| |||||||    
T  21377176 aggatgtttctatgacttgaactcgtaacctttc 21377209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 90 - 220
Target Start/End: Original strand, 8455318 - 8455450
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-a 187  Q
    |||||| |||||||||| ||||||||  |||||  |||||  |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |    
T  8455318 agggcaacccggtgcactaaagctccggcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtgttttacacaa 8455417  T
Q  188 gaagttgtttccaagacttgaactcgtgacctt 220  Q
    || | |||||||| ||||||||| |||||||||    
T  8455418 gaggctgtttccaggacttgaacccgtgacctt 8455450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 17668135 - 17668003
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-a 187  Q
    |||||| |||||||||| |||||||||| ||||  |||||| | |||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| |    
T  17668135 agggcaacccggtgcactaaagctcccatatacgcagggttcgagaaggggttccaccatttggtgtattgtacgcagccttaccctgatttttacacaa 17668036  T
Q  188 gaagttgtttccaagacttgaactcgtgacctt 220  Q
    || ||| |||||| ||||||||| |||||||||    
T  17668035 gaggttctttccaggacttgaacccgtgacctt 17668003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 92 - 222
Target Start/End: Complemental strand, 33795415 - 33795284
Alignment:
Q  92 ggcagcccggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccatttggtgta-ttatacgcagccttaccctgttttttacac-aga 189  Q
    ||||||| |||||||||||||||| |||||| ||||| |||||||||||||||||| | |||||| || ||||||||||||||||||||||||| | |||    
T  33795415 ggcagccaggtgcacaaagctcccgcatacacagggtctgggaaggggtcccacca-taggtgtatttgtacgcagccttaccctgttttttacccaaga 33795317  T
Q  190 agttgtttccaagacttgaactcgtgacctttc 222  Q
     |||||||||  ||||||||| |||||||||||    
T  33795316 ggttgtttccgggacttgaacccgtgacctttc 33795284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 10546296 - 10546161
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttttt-acaca 187  Q
    |||||| |||||||||| ||||||||| |||||  |||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||    
T  10546296 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttttataca 10546197  T
Q  188 -gaagttgtttccaagacttgaactcgtgacctttc 222  Q
     || | |||||||| ||||||||| |||||||||||    
T  10546196 agaggatgtttccaggacttgaacccgtgacctttc 10546161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 10543833 - 10543697
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt--ggtgtattatacgcagccttaccctgttttttacac 186  Q
    |||||| |||||||||| ||||||||| |||||  |||||  ||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||    
T  10543833 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacac 10543734  T
Q  187 -agaagttgtttccaagacttgaactcgtgacctttc 222  Q
     ||| |  ||||||| ||||||||| |||||||||||    
T  10543733 aagaggccgtttccaggacttgaacccgtgacctttc 10543697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 17623697 - 17623565
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-a 187  Q
    |||||| ||| |||||| |||||| ||||||||  ||| || |||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| |    
T  17623697 agggcaacccagtgcactaaagcttccacatacgcaggattcgggaaggggttccaccatttggtgtattgtacgcagccttaccctgatttttacacaa 17623598  T
Q  188 gaagttgtttccaagacttgaactcgtgacctt 220  Q
    || |||||||| | ||||||||| |||||||||    
T  17623597 gaggttgtttcgaggacttgaacccgtgacctt 17623565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 9671312 - 9671180
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacag 188  Q
    |||||| |||||||||| ||||||||| |||||  |||||  |||||||||||||||||||||||||||| |||||||||||||||||||||  ||| ||    
T  9671312 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacaca-ag 9671214  T
Q  189 aagttgtttccaagacttgaactcgtgacctttc 222  Q
    | | |||||||| || |||||| |||||| ||||    
T  9671213 aggctgtttccaggatttgaacccgtgacatttc 9671180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 14530453 - 14530317
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac 186  Q
    |||||| |||||||||| ||||||||| |||||  |||||  |||||||||||||||||||  ||||||||| |||| ||||||||||||||||||| ||    
T  14530453 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgtagccttaccctgttttttatac 14530354  T
Q  187 -agaagttgtttccaagacttgaactcgtgacctttc 222  Q
     ||| | |||||||| ||||||||| |||||||||||    
T  14530353 aagaggctgtttccaggacttgaacccgtgacctttc 14530317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 24200625 - 24200761
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt--ggtgtattatacgcagccttaccctgttttttacac 186  Q
    |||||| |||||||||| ||||||| |||||||  |||||  |||||||| |||||||||||  |||||||| |||||||||||||||||||||||||||    
T  24200625 agggcaacccggtgcactaaagctctcacatactcagggtccgggaagggttcccaccatttttggtgtattgtacgcagccttaccctgttttttacac 24200724  T
Q  187 -agaagttgtttccaagacttgaactcgtgacctttc 222  Q
     ||| | |||||||| ||||||||| |||||| ||||    
T  24200725 aagaggctgtttccaggacttgaacccgtgacttttc 24200761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 99285 - 99399
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagttgtttccaagactt 206  Q
    ||||||||| |||||| ||||| || |||||||| ||||||||||||||||| ||||||||||| || ||||||||||| ||| | |||||| | |||||    
T  99285 aaagctcccgcatacacagggtctgagaaggggttccaccatttggtgtattgtacgcagccttgccatgttttttaca-agaggctgtttctaggactt 99383  T
Q  207 gaactcgtgacctttc 222  Q
    |||| |||||||||||    
T  99384 gaacccgtgacctttc 99399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 187
Target Start/End: Complemental strand, 25632642 - 25632544
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacaca 187  Q
    |||||| |||||||||| ||||||||| ||||| || |||| |||||||  ||||||||||||||||||| |||||||||||| |||||||||||||||    
T  25632642 agggcaacccggtgcactaaagctcccgcatacgtaaggttcgggaaggaatcccaccatttggtgtattgtacgcagccttatcctgttttttacaca 25632544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 219
Target Start/End: Complemental strand, 22371158 - 22371059
Alignment:
Q  118 atacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagttgtttccaagacttgaactcgtgac 217  Q
    ||||| |||||  |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| || | |||||||| ||||||||| ||||||    
T  22371158 atacacagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacac-gaggctgtttccaggacttgaacccgtgac 22371061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 222
Target Start/End: Original strand, 44521416 - 44521509
Alignment:
Q  130 tgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||| |||| ||||||||||||||||| ||||||||||| |||||||||||| |||  |||||||||||| |||||| |||||||||||    
T  44521416 tgggaagggctcccgccatttggtgtattatatgcagccttaccttgttttttacacaagagattgtttccaagatttgaacgcgtgacctttc 44521509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 98 - 220
Target Start/End: Complemental strand, 11514560 - 11514437
Alignment:
Q  98 ccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgt 195  Q
    ||||||||| ||||||||| |||||  ||||| ||||||||| ||||||||||||||||||| |||||||||||||  |||||||||||| ||| | |||    
T  11514560 ccggtgcactaaagctcccgcatacgcagggtctgggaaggg-tcccaccatttggtgtattgtacgcagccttactttgttttttacacaagaggctgt 11514462  T
Q  196 ttccaagacttgaactcgtgacctt 220  Q
    ||||| || |||||| |||||||||    
T  11514461 ttccaggagttgaacccgtgacctt 11514437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 12023963 - 12024054
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||| | |||||||| ||||||||| |||||||||||    
T  12023963 gggagggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacttgaacccgtgacctttc 12024054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 14444861 - 14444730
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-a 187  Q
    |||||| || ||||||| ||||||||| |||||  |||||  |||||||||||||||||||||||||||  ||| |||||||||||||| |||||||| |    
T  14444861 agggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtatcgtacacagccttaccctgt-ttttacacaa 14444763  T
Q  188 gaagttgtttccaagacttgaactcgtgacctt 220  Q
    || | |||||||| ||||||||| |||||||||    
T  14444762 gaggctgtttccaggacttgaacccgtgacctt 14444730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 23145742 - 23145834
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagt-tgtttccaagacttgaactcgtgacctttc 222  Q
    ||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||||  ||| ||||| |||||||||||| |||||||||||    
T  23145742 gggaaagggtcccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttc 23145834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 23557532 - 23557624
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagt-tgtttccaagacttgaactcgtgacctttc 222  Q
    ||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||||  ||| ||||| |||||||||||| |||||||||||    
T  23557532 gggaaagggtcccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttc 23557624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 90 - 220
Target Start/End: Original strand, 25249740 - 25249871
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-a 187  Q
    |||||| |||||||||| ||||||| | |||||  |||||| |||||||| ||||||||||||||||||| ||||||||||||||||| ||| ||||| |    
T  25249740 agggcaacccggtgcactaaagctcacgcatacgcagggttcgggaagggatcccaccatttggtgtattgtacgcagccttaccctg-tttgtacacaa 25249838  T
Q  188 gaagttgtttccaagacttgaactcgtgacctt 220  Q
    ||   |||||||| ||||||||| |||||||||    
T  25249839 gagactgtttccatgacttgaacccgtgacctt 25249871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 27573753 - 27573663
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttt 179  Q
    |||||| |||| ||||| |||||||||||||||| ||||||||||||  ||| ||||||||||||||||| |||||||||||||| |||||    
T  27573753 agggcaacccgatgcactaaagctcccacatacacagggtttgggaaatggttccaccatttggtgtattgtacgcagccttaccatgttt 27573663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 90 - 187
Target Start/End: Original strand, 40762236 - 40762334
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacaca 187  Q
    |||||| |||||||||| |||||||||||||||  |||||   |||| |||||||||||||||||||||| |||| |||||||||| ||||||||||||    
T  40762236 agggcaacccggtgcactaaagctcccacatacgcagggtccaggaaagggtcccaccatttggtgtattgtacgtagccttacccagttttttacaca 40762334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 91 - 187
Target Start/End: Original strand, 4516354 - 4516451
Alignment:
Q  91 gggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacaca 187  Q
    |||||||||||| ||| |||||| ||||||||  |||||  ||||||||||||||||| |||||||||| |||||||| || ||||||||||||||||    
T  4516354 gggcagcccggtacactaaagcttccacatacgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagcgttgccctgttttttacaca 4516451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 17380240 - 17380372
Alignment:
Q  90 agggcagcccggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacaca-g 188  Q
    |||| ||||||||||||||||||||| ||| |  |||||   ||||||||| ||| |||||||||||||  || || ||||||||||||| | ||||| |    
T  17380240 agggaagcccggtgcacaaagctcccgcatccgcagggtccaggaaggggttccatcatttggtgtattgcacacaaccttaccctgtttat-acacaag 17380338  T
Q  189 aagttgtttccaagacttgaactcgtgacctttc 222  Q
    | |||||||||||||||||||| |||||||||||    
T  17380339 aggttgtttccaagacttgaacccgtgacctttc 17380372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 17896375 - 17896258
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccct-gttttttacac-agaagttgtttccaagac 204  Q
    |||||||||||||||  |||||  | ||||||||||||||||||||| |||| ||||||||||||||||  |||||||||| ||| |||||||| | |||    
T  17896375 aaagctcccacatacgcagggtccgagaaggggtcccaccatttggtatattgtacgcagccttaccctatttttttacacaagaggttgtttctaggac 17896276  T
Q  205 ttgaactcgtgacctttc 222  Q
    |||||  |||||||||||    
T  17896275 ttgaatccgtgacctttc 17896258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 21779263 - 21779395
Alignment:
Q  90 agggcagcccggtgcacaa-agctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacag 188  Q
    |||||| |||||||||| | ||||||| ||||   |||||  |||||||||||||||||||||||||||| |||||| ||||||||||||||  ||| ||    
T  21779263 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttacaca-ag 21779361  T
Q  189 aagttgtttccaagacttgaactcgtgacctttc 222  Q
    | | ||| |||| ||||||||| |||||||||||    
T  21779362 aggctgtctccaggacttgaacccgtgacctttc 21779395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 220
Target Start/End: Original strand, 25079719 - 25079852
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctg-ttttttacac- 186  Q
    |||||| |||||||||| |||||||   |||||  |||||  ||||||||||||||||||| |||||||| |||||| ||||||| || ||||||||||     
T  25079719 agggcaacccggtgcactaaagctcttgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcatccttaccttgtttttttacaca 25079818  T
Q  187 agaagttgtttccaagacttgaactcgtgacctt 220  Q
    ||| |||||||| ||||||||||| |||||||||    
T  25079819 agaggttgtttctaagacttgaacccgtgacctt 25079852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 44643656 - 44643563
Alignment:
Q  90 agggcagcccggtgcacaaag-ctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttttt 182  Q
    ||||||||||||||||| ||| ||||| |||||  ||||| ||||||||||||||||||||||||  ||| ||||||||||||| |||||||||    
T  44643656 agggcagcccggtgcactaaggctcccgcatacgcagggtctgggaaggggtcccaccatttggtacattgtacgcagccttactctgtttttt 44643563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 5450376 - 5450284
Alignment:
Q  132 ggaaggggtcccaccatttggtgtattatacgcagccttaccctg-ttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||||||||| ||||||||||| |||||||||||||| || |||||||||| ||| |||||||||| || |||||| |||||||||||    
T  5450376 ggaaggggtcccaccctttggtgtattgtacgcagccttaccatgtttttttacacaagaggttgtttccaggaattgaacccgtgacctttc 5450284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 19977734 - 19977850
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttac-acagaagttgtttccaagact 205  Q
    ||||||||| |||||| | |||| |||||||| ||||||||||||||||||| |||||| ||||| ||| |||||||| | ||| | ||||||||  |||    
T  19977734 aaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgcaaccttatcctattttttacaaaagaggctgtttccagaact 19977833  T
Q  206 tgaactcgtgacctttc 222  Q
    ||||| |||||||||||    
T  19977834 tgaacccgtgacctttc 19977850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 31821363 - 31821477
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagttgtttccaagactt 206  Q
    ||||||||| |||||| ||| || || ||||||||||| ||||||||||||| ||| || ||||||||| |||||||||||   | |||||| | |||||    
T  31821363 aaagctcccgcatacacaggtttcggaaaggggtcccatcatttggtgtattgtacacaaccttaccctattttttacaca-cggctgtttctacgactt 31821461  T
Q  207 gaactcgtgacctttc 222  Q
    ||||||||||||||||    
T  31821462 gaactcgtgacctttc 31821477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 36871624 - 36871534
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttt 180  Q
    |||||| |||||||||| ||||||||| |||||  ||| |  |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  36871624 agggcaacccggtgcactaaagctcccgcatacgcagg-tccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 36871534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 222
Target Start/End: Original strand, 12315697 - 12315787
Alignment:
Q  132 ggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagttgtttccaagacttgaactcgtgacctttc 222  Q
    |||||| ||| ||| |||||||||||| ||| ||| ||||||||||||||||   ||||| |||||||| |||||||||||||||||||||    
T  12315697 ggaaggagtctcactatttggtgtattgtacacagtcttaccctgttttttaataagaagctgtttccatgacttgaactcgtgacctttc 12315787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 23397897 - 23397765
Alignment:
Q  90 agggcagcccggtgcacaa-agctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacag 188  Q
    |||||| |||||||||| | ||||||| ||||  ||||||  | |||||||||||||||||||||||||| |||| ||||||||||| ||||  ||| ||    
T  23397897 agggcaacccggtgcactagagctcccgcatatgtagggtccgagaaggggtcccaccatttggtgtattgtacgtagccttaccctattttacaca-ag 23397799  T
Q  189 aagttgtttccaagacttgaactcgtgacctttc 222  Q
    | | |||||||| ||||||||| | |||||||||    
T  23397798 aggctgtttccaggacttgaacccatgacctttc 23397765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 222
Target Start/End: Original strand, 29419946 - 29420025
Alignment:
Q  148 tttggtgtattatacgcagccttac----cctgttttttacaca-gaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||||| |||||||||||||    ||||||||||||||| || |||||||||| |||||||||||||||||||||    
T  29419946 tttggtgtattgtacgcagccttacttaccctgttttttacacaagaggttgtttccaggacttgaactcgtgacctttc 29420025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 25641592 - 25641501
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaa-gttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||||||||| |||||||||||| |||||| | |||||||| |||| ||||| || | |||||||| ||||||||| |||||||||||    
T  25641592 gggaaggggtcccacaatttggtgtattgtacgcaactttaccctg-ttttcacacaaaatgctgtttccaggacttgaacccgtgacctttc 25641501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 40416921 - 40417005
Alignment:
Q  137 gggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctt 220  Q
    |||||||| || |||||||||| ||| ||||||| |||||||||||| || ||| |||||||||| ||||||||| |||||||||    
T  40416921 gggtcccatcaattggtgtattgtacacagcctttccctgttttttatacaagaggttgtttccatgacttgaacccgtgacctt 40417005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 39914350 - 39914440
Alignment:
Q  132 ggaaggggtcccaccatttggtgtattatacgcagccttaccctg-ttttttacac-agaagttgtttccaagacttgaactcgtgacctt 220  Q
    |||||||||||||||||| |||||||| ||| || |||||||||| |||||||||| ||| ||||||||||  |||||| | |||||||||    
T  39914350 ggaaggggtcccaccattcggtgtattgtacacatccttaccctgtttttttacacaagaggttgtttccagtacttgatcccgtgacctt 39914440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 5841121 - 5841029
Alignment:
Q  131 gggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacacagaa-gttgtttccaagacttgaactcgtgacctt 220  Q
    |||||||||||||||||||  || |||||| |||||| ||||||||| ||||||||||| || | |||||| | ||||||||| |||||||||    
T  5841121 gggaaggggtcccaccattattgatgtattgtacgcatccttaccctattttttacacaaaaggctgtttctaggacttgaacccgtgacctt 5841029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 45235837 - 45235954
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgtt-ttttaca-cagaagttgtttccaagac 204  Q
    ||||||||  ||||| |||||| ||| ||||||||||||||||| |||||||| ||| ||||||||||| || |||||||  |||   |||||| | |||    
T  45235837 aaagctcctgcatacgtagggtctggtaaggggtcccaccattttgtgtattacacgtagccttaccctattattttacagaagagactgtttctaggac 45235936  T
Q  205 ttgaactcgtgacctttc 222  Q
    |||||||||||| |||||    
T  45235937 ttgaactcgtgatctttc 45235954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 206
Target Start/End: Complemental strand, 30826150 - 30826052
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagact 205  Q
    ||||||||| ||||  |||||| ||||||||| ||| ||||||||||||||| |||||| |||||||||  ||||||||| ||| | |||||||||||||    
T  30826150 aaagctcccgcatatgtagggtctgggaagggttcc-accatttggtgtattgtacgcaaccttaccct-atttttacacaagaggctgtttccaagact 30826053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 222
Target Start/End: Complemental strand, 7214604 - 7214533
Alignment:
Q  152 gtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||| |||||||||||||||||| |||||||| |||   |||||||||||||||||| | |||||||||    
T  7214604 gtgtattgtacgcagccttaccctgtattttacacaagagactgtttccaagacttgaacccatgacctttc 7214533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 24890502 - 24890451
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttttt 182  Q
    ||||||||||||||||| |||||||||| || ||||||||||| ||||||||    
T  24890502 gggaaggggtcccaccaattggtgtattgtatgcagccttaccttgtttttt 24890451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 182
Target Start/End: Original strand, 26684640 - 26684715
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttttt 182  Q
    ||||||||| |||||  |||||| |||||| ||||||||||||| || |||| |||||||||||||| | ||||||    
T  26684640 aaagctcccgcatacgcagggttcgggaagaggtcccaccatttagtatattgtacgcagccttaccatatttttt 26684715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 31158459 - 31158538
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccacca--tttggtgtattatacgcagccttaccctgttttttac 184  Q
    ||||||||| |||||  ||||| ||||||||||||||||||  |||||| |||| || |||  |||||||||||||||||    
T  31158459 aaagctcccgcatacgcagggtctgggaaggggtcccaccatttttggtttattgtatgcaatcttaccctgttttttac 31158538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 187
Target Start/End: Original strand, 15296408 - 15296507
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt-ggtgtattatacgcagccttaccctgttttttacaca 187  Q
    ||||||||| || |||| |||||| ||||||||  |||||  | |||||| |||||| |||| ||| |||| |||||||||||||||||| |||||||||    
T  15296408 agggcagcctggcgcaccaaagcttccacatacgcagggtccgagaagggatcccactattttggtatattgtacgcagccttaccctgtattttacaca 15296507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 19615108 - 19614991
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaaga 203  Q
    ||||||||  |||||  |||||| |||||||||||| || |||  |||| |||| ||||||| |||||||||||||||| || ||| | |||||| | ||    
T  19615108 aaagctcctgcatacgcagggttcgggaaggggtcc-actattattggtatattgtacgcagtcttaccctgttttttatacaagaggatgtttcaagga 19615010  T
Q  204 cttgaactcgtgacctttc 222  Q
    ||||||| |||||||||||    
T  19615009 cttgaacccgtgacctttc 19614991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 174
Target Start/End: Original strand, 38589940 - 38590007
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccc 174  Q
    |||||| ||||||||||||||| ||||| ||| ||||||||||| | || ||||| |||| |||||||    
T  38589940 aaagcttccacatacatagggtctgggatgggatcccaccattttgcgtgttatatgcagtcttaccc 38590007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 44449427 - 44449478
Alignment:
Q  131 gggaaggggtcccaccattt-ggtgtattatacgcagccttaccctgttttt 181  Q
    ||||||||||||||| |||| |||||||| |||||||||||| |||||||||    
T  44449427 gggaaggggtcccactattttggtgtattgtacgcagccttatcctgttttt 44449478  T

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Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 13245139 - 13245181
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttacc 173  Q
    |||||||||||||||||||| ||||| | ||||||||||||||    
T  13245139 gggaaggggtcccaccatttagtgtaatgtacgcagccttacc 13245181  T

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Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 24859998 - 24860070
Alignment:
Q  98 ccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagcct 169  Q
    ||||||||| ||||||||| |||||  |||||  | |||||||| | ||||||||||||||| ||||||||||    
T  24859998 ccggtgcactaaagctcccgcatacgcagggtccgagaaggggttctaccatttggtgtattgtacgcagcct 24860070  T

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Target: chr8 (Bit Score: 74; Significance: 4e-34; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 97 - 220
Target Start/End: Complemental strand, 44530275 - 44530150
Alignment:
Q  97 cccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttg 194  Q
    |||||||||| ||||||||| |||||  |||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||    
T  44530275 cccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggttg 44530176  T
Q  195 tttccaagacttgaactcgtgacctt 220  Q
    |||||||||||||||| |||||||||    
T  44530175 tttccaagacttgaacccgtgacctt 44530150  T

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Target: chr8; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 90 - 215
Target Start/End: Original strand, 5135292 - 5135418
Alignment:
Q  90 agggcagcccggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-ag 188  Q
    |||||||||||||||||||||||||  |||||  |||||  |||||||||||||||||||||||||||| ||| |||||||||||| |||||||||| ||    
T  5135292 agggcagcccggtgcacaaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctcttttttacacaag 5135391  T
Q  189 aagttgtttccaagacttgaactcgtg 215  Q
    | | |||||||| ||||||||| ||||    
T  5135392 aggctgtttccaggacttgaacccgtg 5135418  T

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Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 90 - 220
Target Start/End: Original strand, 28817628 - 28817760
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-a 187  Q
    |||||| |||| ||||| ||||||||| |||||  |||||  ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |    
T  28817628 agggcaacccgatgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattgggtgtattgtacgcagccttaccctgttttttacacaa 28817727  T
Q  188 gaagttgtttccaagacttgaactcgtgacctt 220  Q
    || | |||||||| ||||||||| |||||||||    
T  28817728 gaggctgtttccaggacttgaacccgtgacctt 28817760  T

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Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 36720929 - 36720797
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-a 187  Q
    |||||| || ||||||| |||||| || |||||  |||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  36720929 agggcaaccgggtgcactaaagcttccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaa 36720830  T
Q  188 gaagttgtttccaagacttgaactcgtgacctt 220  Q
    || | |||||||| ||||||||| |||||||||    
T  36720829 gaggctgtttccaggacttgaacccgtgacctt 36720797  T

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Target: chr8; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 97 - 220
Target Start/End: Original strand, 29521694 - 29521819
Alignment:
Q  97 cccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttg 194  Q
    |||||||||| ||||||||| |||||  ||||| ||||| ||| ||||||||||||||||||| |||||||||||||||||||||||| || ||| | ||    
T  29521694 cccggtgcactaaagctcccgcatacgcagggtctgggatgggttcccaccatttggtgtattgtacgcagccttaccctgttttttaaacaagaggctg 29521793  T
Q  195 tttccaagacttgaactcgtgacctt 220  Q
    |||||| ||||||||| |||||||||    
T  29521794 tttccaggacttgaacccgtgacctt 29521819  T

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Target: chr8; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 90 - 187
Target Start/End: Complemental strand, 29877227 - 29877129
Alignment:
Q  90 agggcagcccggtgcacaaa-gctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacaca 187  Q
    ||||||||| ||||||| || |||||| |||||  |||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29877227 agggcagcctggtgcactaacgctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacaca 29877129  T

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Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 187
Target Start/End: Original strand, 24365071 - 24365160
Alignment:
Q  99 cggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctg-ttttttacaca 187  Q
    |||||||||||||||||||||||  |||||  |||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||    
T  24365071 cggtgcacaaagctcccacatacgcagggtccgggaaggggtcccaccatttggtgtattgttcgcagccttaccctgattttttacaca 24365160  T

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Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 39460996 - 39461132
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac 186  Q
    |||||| |||||||||| ||||||||| |||||  |||||  ||||||||||| |||||||  ||||||||| ||||||||||||| |||||||||||||    
T  39460996 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtacgcagccttactctgttttttacac 39461095  T
Q  187 -agaagttgtttccaagacttgaactcgtgacctttc 222  Q
     ||| | |||||||| ||||||||| |||||||||||    
T  39461096 aagaggctgtttccaggacttgaacccgtgacctttc 39461132  T

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Target: chr8; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 107 - 210
Target Start/End: Original strand, 8483958 - 8484062
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagact 205  Q
    ||||||||| |||||  ||||| ||||| |||||||||||| |||||||||| ||||||||||| ||||||||||||||| ||| |||||||||| ||||    
T  8483958 aaagctcccgcatacgcagggtctgggatggggtcccaccaattggtgtattgtacgcagccttgccctgttttttacacaagaggttgtttccaggact 8484057  T
Q  206 tgaac 210  Q
    |||||    
T  8484058 tgaac 8484062  T

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Target: chr8; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 35261812 - 35261680
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-a 187  Q
    |||||| |||||||||| ||||||||| |||||  |||||   ||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |    
T  35261812 agggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttttacacaa 35261713  T
Q  188 gaagttgtttccaagacttgaactcgtgacctt 220  Q
    ||   |||||||| | ||||||| |||||||||    
T  35261712 gagactgtttccagggcttgaacccgtgacctt 35261680  T

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Target: chr8; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 12670294 - 12670384
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagttgtttccaagacttgaactcgtgacctttc 222  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||  ||| ||| | |||||||| ||||||||| |||||||||||    
T  12670294 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacaca-agaggctgtttccaggacttgaacccgtgacctttc 12670384  T

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Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 187
Target Start/End: Complemental strand, 5689756 - 5689666
Alignment:
Q  98 ccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacaca 187  Q
    ||||||||| |||||||||||||||  | |||| |||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||    
T  5689756 ccggtgcactaaagctcccacatacgcatggttcgggaaggggttccaccatttggtgtattgtacgcagccttaccctgctttttacaca 5689666  T

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Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 17823709 - 17823575
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-a 187  Q
    |||||| |||||||||| ||||||||  ||||   |||||| |||||||||| ||||||||||||||||| ||||||| |||| |||| ||||||||| |    
T  17823709 agggcaacccggtgcactaaagctcctgcatatgcagggttcgggaaggggttccaccatttggtgtattttacgcagtcttatcctggtttttacacaa 17823610  T
Q  188 gaagttgtttccaagacttgaactcgtgacctttc 222  Q
    || | |||||||| ||||||||| |||||||||||    
T  17823609 gaggctgtttccaggacttgaacccgtgacctttc 17823575  T

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Target: chr8; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 220
Target Start/End: Complemental strand, 13160815 - 13160703
Alignment:
Q  108 aagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagactt 206  Q
    |||||||| |||||  |||||  |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||| | |||||| | |||||    
T  13160815 aagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttctaggactt 13160717  T
Q  207 gaactcgtgacctt 220  Q
    |||| |||||||||    
T  13160716 gaacccgtgacctt 13160703  T

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Target: chr8; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 44742564 - 44742653
Alignment:
Q  133 gaaggggtcccaccattt-ggtgtattatacgcagccttaccctgttttttacacagaag-ttgtttccaagacttgaactcgtgacctt 220  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| || |||||||||  |||||||||| |||||||    
T  44742564 gaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttttacacaggagattgtttccagaacttgaactcatgacctt 44742653  T

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Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 90 - 219
Target Start/End: Complemental strand, 12626023 - 12625891
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgtt-ttttacac- 186  Q
    |||||| |||||||||| ||||||||| |||||  |||||  |||| ||||||||||||||||||||||| || |||| ||||||||||| ||||||||     
T  12626023 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggagggggtcccaccatttggtgtattgtatgcagtcttaccctgtttttttacaca 12625924  T
Q  187 agaagttgtttccaagacttgaactcgtgacct 219  Q
    ||| |||||||||| ||||||| | ||||||||    
T  12625923 agaggttgtttccaggacttgagcccgtgacct 12625891  T

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Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 36918239 - 36918123
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttaca-cagaagttgtttccaagact 205  Q
    ||||||| | |||||||||||||||||||||  ||| || |||||||||||| ||| ||||||||||||||||||||||  |||| |||||||||  |||    
T  36918239 aaagctctcgcatacatagggtttgggaaggaatcctactatttggtgtattgtacacagccttaccctgttttttacataagaaattgtttccagaact 36918140  T
Q  206 tgaactcgtgacctttc 222  Q
    |||||  ||||||||||    
T  36918139 tgaacatgtgacctttc 36918123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 45071397 - 45071266
Alignment:
Q  90 agggcagcccggtgcaca-aagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-a 187  Q
    |||||| ||||||||||  |||||||| |||||  | |||  |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |    
T  45071397 agggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaa 45071299  T
Q  188 gaagttgtttccaagacttgaactcgtgacctt 220  Q
    || | ||||||||  |||||||| |||||||||    
T  45071298 gaggctgtttccagaacttgaacccgtgacctt 45071266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 42083700 - 42083835
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccacca-tttggtgtattatacgcagccttaccctgttttttacaca 187  Q
    ||||||||||  ||||| ||||||||||| |||| |||||| ||||||||||||||||| |||||| || | ||||||||||| |||  |||||||||||    
T  42083700 agggcagcccaatgcactaaagctcccacgtacacagggttcgggaaggggtcccaccattttggtatactgtacgcagccttgccccattttttacaca 42083799  T
Q  188 gaa-gttgtttccaagacttgaactcgtgacctttc 222  Q
     || | |||||||| ||||||||| |||||||||||    
T  42083800 aaaggctgtttccaggacttgaacccgtgacctttc 42083835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 131 - 220
Target Start/End: Original strand, 8897808 - 8897898
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctt 220  Q
    |||||||||||||||||||||||||||| |||| ||||||||||| |||||||||| ||  |||||||||| ||||| ||| |||||||||    
T  8897808 gggaaggggtcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgacctt 8897898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 131 - 220
Target Start/End: Original strand, 7136571 - 7136663
Alignment:
Q  131 gggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctt 220  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||||| ||||||||| ||| |||||||||| ||||||||| | |||||||    
T  7136571 gggaaggggtcccaccattattggtgtattgtacgcagccttaccctggtttttacacaagaggttgtttccaggacttgaacccatgacctt 7136663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 30454099 - 30454231
Alignment:
Q  90 agggcagcccggtgcacaa-agctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacag 188  Q
    |||||| |||||||||| | ||||||| ||||   |||||  |||||||||||||||||||||||||||  |||||||||||||| ||||||  ||| ||    
T  30454099 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatcgtacgcagccttaccttgttttacaca-ag 30454197  T
Q  189 aagttgtttccaagacttgaactcgtgacctttc 222  Q
    | | |||||||| ||||||||| |||||||||||    
T  30454198 aggctgtttccaggacttgaacccgtgacctttc 30454231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 44781506 - 44781642
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt--ggtgtattatacgcagccttaccctgttttttacac 186  Q
    |||||||| | |||||| ||||||||| |||||  ||||| ||||| ||||||||| |||||  |||||||| ||| |||||||||||||| ||||||||    
T  44781506 agggcagcacagtgcactaaagctcccgcatacgcagggtctgggacggggtcccaacatttttggtgtattgtacacagccttaccctgtcttttacac 44781605  T
Q  187 -agaagttgtttccaagacttgaactcgtgacctttc 222  Q
     ||| |||||||||| ||||||||| ||||| |||||    
T  44781606 aagaggttgtttccaggacttgaacccgtgaactttc 44781642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 222
Target Start/End: Complemental strand, 2626620 - 2626518
Alignment:
Q  124 agggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttttt---acaca-gaagttgtttccaagacttgaactcgtgacct 219  Q
    ||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||||||||   ||||| || | |||||||| ||||||||| ||||||||    
T  2626620 agggtctgggaaggggtcccatcatttggtgtattgtacgcagtcttaccctgtttttttttacacaagaggctgtttccaggacttgaacccgtgacct 2626521  T
Q  220 ttc 222  Q
    |||    
T  2626520 ttc 2626518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 6760913 - 6760823
Alignment:
Q  133 gaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctt 220  Q
    |||||||||||||||||  ||||||||| |||| |||||||||||||||||||||| ||| | |||||||| ||||||||| |||||||||    
T  6760913 gaaggggtcccaccattattggtgtattgtacgaagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctt 6760823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 130 - 220
Target Start/End: Complemental strand, 26954227 - 26954133
Alignment:
Q  130 tgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgtt-ttttacac-agaagttgtttccaagacttgaactcgtgacctt 220  Q
    ||||||||||||||||||||  ||||||||| ||||||||||||||||||| |||||||| ||| | |||||||| ||||||||| |||||||||    
T  26954227 tgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccaggacttgaacccgtgacctt 26954133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 109 - 222
Target Start/End: Complemental strand, 31457285 - 31457172
Alignment:
Q  109 agctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttg 207  Q
    ||||||| |||||  ||||||||||||||||||| |||||||| |||||| |||||||||||  |||  ||||||||| ||| ||||||| || ||||||    
T  31457285 agctcccgcatacgcagggtttgggaaggggtcctaccatttgatgtattgtacgcagccttttcct-atttttacacaagaggttgtttacaggacttg 31457187  T
Q  208 aactcgtgacctttc 222  Q
    ||| |||||||||||    
T  31457186 aacccgtgacctttc 31457172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 98 - 225
Target Start/End: Complemental strand, 389770 - 389639
Alignment:
Q  98 ccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttttt--acac-agaagtt 193  Q
    ||||||||| ||||||| | |||||  |||||  || ||||| ||||| ||||||||||||| |||||| ||||||||||||||||  |||| ||| | |    
T  389770 ccggtgcactaaagctctcgcatacgcagggtcaggaaagggatcccatcatttggtgtattgtacgcaaccttaccctgtttttttgacacaagagggt 389671  T
Q  194 gtttccaagacttgaactcgtgacctttctga 225  Q
    ||||||| ||||||||| ||||||||||||||    
T  389670 gtttccaggacttgaacccgtgacctttctga 389639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 22598248 - 22598156
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||| ||||| ||||| |||||||||| |||  |||||||||||||||||||||| ||| |||||||||| || |||||| |||||||||||    
T  22598248 gggaaagggtctcaccaattggtgtattgtacatagccttaccctgttttttacacaagaggttgtttccaggatttgaacccgtgacctttc 22598156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 35106014 - 35105922
Alignment:
Q  132 ggaaggggtcccaccatt-tggtgtattatacgcagccttaccctgttttttacaca-gaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||| |||||||||||| ||||||||| ||||||||||||| || | ||||||||| || |||||||||| ||||||||| |||||||||||    
T  35106014 ggaagaggtcccaccattctggtgtattgtacgcagccttacactctcttttacacaagaggttgtttccaggacttgaacccgtgacctttc 35105922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 20870015 - 20869958
Alignment:
Q  132 ggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacaca 187  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||    
T  20870015 ggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacaca 20869958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 19729431 - 19729382
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttt 180  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  19729431 gggaaggggtcccaccatttggtgtattgtacacagccttaccctgtttt 19729382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 222
Target Start/End: Original strand, 20284078 - 20284209
Alignment:
Q  97 cccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgtttttt--acaca-gaa 190  Q
    |||||||||| ||| ||||| |||||  |||||  |||||||||||||||||||  ||||||||| |||||||||||||||| ||||||  | ||| ||     
T  20284078 cccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttacccttttttttttatacaagag 20284177  T
Q  191 gttgtttccaagacttgaactcgtgacctttc 222  Q
    | |||||||| ||||||||| |||||||||||    
T  20284178 gctgtttccaggacttgaacccgtgacctttc 20284209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 11000952 - 11001044
Alignment:
Q  90 agggcagcccggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttttt 182  Q
    ||||||||||  ||||| |||||||  |||| | |||||| ||| |||||||||||||||||||||||| ||| |||||||| | ||||||||    
T  11000952 agggcagcccaatgcacgaagctcctgcataaacagggttcgggtaggggtcccaccatttggtgtattgtacacagccttatcttgtttttt 11001044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 222
Target Start/End: Original strand, 18164764 - 18164895
Alignment:
Q  92 ggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-aga 189  Q
    |||| |||||||||| ||||||||| |||||  |||||  |||||  |||| || | ||||||||||| |||||| |||||||||| ||||||||| |||    
T  18164764 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaatggtcacatcctttggtgtattgtacgcaaccttaccctg-tttttacacaaga 18164862  T
Q  190 agttgtttccaagacttgaactcgtgacctttc 222  Q
     | |||||||| ||||||||| |||||||||||    
T  18164863 ggctgtttccaggacttgaacccgtgacctttc 18164895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 222
Target Start/End: Original strand, 21070706 - 21070838
Alignment:
Q  97 cccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccc---tgttttttacac-aga 189  Q
    |||||||||| ||| ||||| |||||  |||||  |||||||||||||||||||  ||||||||| |||||||||||||||   | ||||||| || |||    
T  21070706 cccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctttttttttttatacaaga 21070805  T
Q  190 agttgtttccaagacttgaactcgtgacctttc 222  Q
     | |||||||| ||||||||| |||||||||||    
T  21070806 ggctgtttccaggacttgaacccgtgacctttc 21070838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 220
Target Start/End: Complemental strand, 25250621 - 25250523
Alignment:
Q  125 gggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctt 220  Q
    ||||| |||||||||||||||||||  ||||||||| ||||||||| |||||| |||||||||| | | | |||||||| |||||||||  ||||||||    
T  25250621 gggttcgggaaggggtcccaccattattggtgtattgtacgcagccataccctattttttacacaataggctgtttccaggacttgaacatgtgacctt 25250523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 43942418 - 43942365
Alignment:
Q  130 tgggaaggggtcccaccattt--ggtgtattatacgcagccttaccctgttttt 181  Q
    |||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  43942418 tgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttt 43942365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 10857962 - 10857869
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttttt 182  Q
    |||||| |||||||||| ||||||||| |||||  | |||   ||||| |||||||||| |||||||||| | |||||||||||||||||||||    
T  10857962 agggcaacccggtgcactaaagctcccgcatacgcaaggtccaggaagtggtcccaccaattggtgtattgtgcgcagccttaccctgtttttt 10857869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 210
Target Start/End: Original strand, 40604917 - 40605029
Alignment:
Q  99 cggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaag-ttgtt 196  Q
    |||||||| ||||||||| ||||| |||||||| ||||||| ||| | ||||| ||||||| |||||| ||||| ||  ||||||||||| ||| |||||    
T  40604917 cggtgcactaaagctcccgcatacgtagggtttcggaagggatcc-atcatttagtgtattgtacgcaaccttatccaattttttacacaaaagattgtt 40605015  T
Q  197 tccaagacttgaac 210  Q
    |||| |||||||||    
T  40605016 tccatgacttgaac 40605029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 222
Target Start/End: Original strand, 14018013 - 14018105
Alignment:
Q  132 ggaaggggtcccacca-tttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||| |||||||||| ||| ||||||| ||||||| || |||||||||||||||| |||   |||||||||||||||||| | |||||||||    
T  14018013 ggaagtggtcccaccaatttagtgtattgtacgcagtctcaccctgttttttacacaagagactgtttccaagacttgaacccatgacctttc 14018105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 20869544 - 20869632
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||||| ||||  |||||||||| ||| |||||||||||||||||  ||| ||| | |||||||| ||||||||| |||||||||||    
T  20869544 gggaaggggtctcacc--ttggtgtattgtacacagccttaccctgttttacaca-agaggctgtttccaggacttgaacccgtgacctttc 20869632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 187
Target Start/End: Original strand, 17250895 - 17250977
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacaca 187  Q
    ||||||||  |||||  |||||| ||||| |||||||||||||  ||||||||| ||||| |||||| |||||||||||||||    
T  17250895 aaagctccttcatacgcagggttcgggaaagggtcccaccattattggtgtattgtacgctgccttaacctgttttttacaca 17250977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 23286375 - 23286418
Alignment:
Q  137 gggtcccaccatttggtgtattatacgcagccttaccctgtttt 180  Q
    |||||||||||||||||||||| |||||||| ||||||||||||    
T  23286375 gggtcccaccatttggtgtattgtacgcagctttaccctgtttt 23286418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 16225112 - 16225056
Alignment:
Q  131 gggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttaca 185  Q
    |||||||| ||||||||||  ||||||||| ||||||| ||||||||||||||||||    
T  16225112 gggaagggatcccaccattattggtgtattgtacgcagtcttaccctgttttttaca 16225056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 28407536 - 28407471
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtg 154  Q
    |||||| |||||||||  ||||||||| ||||| ||||||  ||||||||||||||||||||||||    
T  28407536 agggcaacccggtgcagtaaagctcccgcatacgtagggtccgggaaggggtcccaccatttggtg 28407471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 26457816 - 26457776
Alignment:
Q  135 aggggtcccaccatttggtgtattatacgcagccttaccct 175  Q
    ||||||||||||| |||||||||| ||||||||||||||||    
T  26457816 aggggtcccaccaattggtgtattgtacgcagccttaccct 26457776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 23000263 - 23000313
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttt 181  Q
    |||||||||||||||||||||||||||| || | | ||||||| |||||||    
T  23000263 gggaaggggtcccaccatttggtgtattgtatggaaccttaccgtgttttt 23000313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 30962847 - 30962909
Alignment:
Q  161 acgcagccttaccctgttttttacaca-gaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||| ||||| ||||||||||| || | |||||||| |||||||| ||||||||||||    
T  30962847 acgcagcctaaccctattttttacacaagaggctgtttccaggacttgaagtcgtgacctttc 30962909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 26102650 - 26102581
Alignment:
Q  90 agggcagcccggtgcacaa-agctcccacatacatagggtttgggaaggggtcccaccatttggtgtatt 158  Q
    |||||| |||||||||| | ||||||| ||||   |||||  ||||||||||||||||||||||||||||    
T  26102650 agggcaacccggtgcactagagctcccgcataagcagggtccgggaaggggtcccaccatttggtgtatt 26102581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 90 - 220
Target Start/End: Original strand, 40272814 - 40272946
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-a 187  Q
    |||||| |||||||||| ||||||||| |||||  |||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  40272814 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaa 40272913  T
Q  188 gaagttgtttccaagacttgaactcgtgacctt 220  Q
    || |||||||||| ||||||||| | |||||||    
T  40272914 gaggttgtttccaggacttgaacccatgacctt 40272946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 53996567 - 53996702
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt-ggtgtattatacgcagccttaccctgttttttacac- 186  Q
    ||||||||||||||||| |||||||||||||||  || ||  |||||||||||||||||||| |||||||| || ||||||||||||||||||||||||     
T  53996567 agggcagcccggtgcactaaagctcccacatacgcagtgtcagggaaggggtcccaccattttggtgtattgtaagcagccttaccctgttttttacaca 53996666  T
Q  187 agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||| |||||||||| ||||||||| |||||||||||    
T  53996667 agaggttgtttccacgacttgaacacgtgacctttc 53996702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 88 - 222
Target Start/End: Complemental strand, 26573284 - 26573148
Alignment:
Q  88 agagggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac 186  Q
    ||||||||||| ||||||| ||||||| | |||||  |||||  |||| |||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  26573284 agagggcagcctggtgcactaaagctcacgcatacgcagggtccgggatggggtcccaccaattggtgtattgtacgcagccttaccctgttttttacac 26573185  T
Q  187 a-gaagttgtttccaagacttgaactcgtgacctttc 222  Q
    | || | |||||||| ||||||||| |||||||||||    
T  26573184 aggaggctgtttccaggacttgaacccgtgacctttc 26573148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 45139480 - 45139614
Alignment:
Q  90 agggcagcccggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccattt--ggtgtattatacgcagccttaccctgttttttacac- 186  Q
    ||||||||||||||||||||| |||| |||||  ||| | |||||||||||||||||||||  |||||||| || ||||||||||||||| ||||||||     
T  45139480 agggcagcccggtgcacaaagttcccgcatacgcagg-tctgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtgttttacaca 45139578  T
Q  187 agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||| ||||||||||| |||||||| |||||||||||    
T  45139579 agaggttgtttccaaaacttgaacccgtgacctttc 45139614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 13628792 - 13628928
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac 186  Q
    |||||| |||||||||| ||||||||| |||||  |||||  |||||||||||||||||||  ||||||||| |||||||||||||||||||| ||||||    
T  13628792 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttacac 13628891  T
Q  187 -agaagttgtttccaagacttgaactcgtgacctttc 222  Q
     ||| | |||||||| ||||||||| |||||||||||    
T  13628892 aagaggctgtttccaggacttgaacccgtgacctttc 13628928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 29366722 - 29366857
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac 186  Q
    |||||| ||| |||||| |||||||||||||||  |||||  |||||||||||||||||||  ||||||||| |||||||||||||||||||||||| ||    
T  29366722 agggcaacccagtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttatac 29366821  T
Q  187 -agaagttgtttccaagacttgaactcgtgaccttt 221  Q
     ||| | |||||||| ||||||||| ||||||||||    
T  29366822 aagaggctgtttccaggacttgaacccgtgaccttt 29366857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 222
Target Start/End: Original strand, 12914072 - 12914171
Alignment:
Q  124 agggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||| |||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||| ||| | |||||||| |||||||||| ||||||||||    
T  12914072 agggtctgggaaggggtctcaccatttggtgtattgtacgccgccttaccctgttttttacacaagaggctgtttccaggacttgaacttgtgacctttc 12914171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 34420645 - 34420780
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt-ggtgtattatacgcagccttaccctgttttttacac- 186  Q
    |||||||||  |||||| |||||||||||||||  | |||  |||||||||||||||||||| |||||||  |||||||||||||||||||||||||||     
T  34420645 agggcagccatgtgcactaaagctcccacatacgcaaggtccgggaaggggtcccaccattttggtgtatggtacgcagccttaccctgttttttacaca 34420744  T
Q  187 agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||| | |||||||| ||||||||| |||||||||||    
T  34420745 agaggctgtttccaggacttgaacccgtgacctttc 34420780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 107 - 221
Target Start/End: Original strand, 46421055 - 46421172
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaaga 203  Q
    ||||||||| |||||  |||||  |||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||| ||| | |||||||| ||    
T  46421055 aaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccagga 46421154  T
Q  204 cttgaactcgtgaccttt 221  Q
    ||||||| ||||||||||    
T  46421155 cttgaacccgtgaccttt 46421172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 22609920 - 22609789
Alignment:
Q  90 agggcagcccggtgcaca-aagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-a 187  Q
    |||||| ||||||||||  |||||||| |||||  | |||  |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |    
T  22609920 agggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaa 22609822  T
Q  188 gaagttgtttccaagacttgaactcgtgacctt 220  Q
    || | |||||||||||||||||| ||| |||||    
T  22609821 gaggctgtttccaagacttgaacccgttacctt 22609789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 26869861 - 26869728
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttaca-ca 187  Q
    |||||| |||||||||| ||||||||| |||||  | |||  || ||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||    
T  26869861 agggcaacccggtgcaccaaagctcccgcatacgcatggtccggcaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacca 26869763  T
Q  188 gaagttgtttccaagacttgaactcgtgacctttc 222  Q
    || | |||||||| |||||||||  ||||||||||    
T  26869762 gaggctgtttccaggacttgaacctgtgacctttc 26869728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 1217243 - 1217111
Alignment:
Q  90 agggcagcccggtgcacaa-agctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacag 188  Q
    |||||| |||||||||| | ||||||| ||||   |||||  ||||||||||||| |||||||||||||| |||||||||||||||||||||  ||| ||    
T  1217243 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccgccatttggtgtattgtacgcagccttaccctgttttacaca-ag 1217145  T
Q  189 aagttgtttccaagacttgaactcgtgacctttc 222  Q
    | | |||||||| ||||||||| |||||||||||    
T  1217144 aggctgtttccaggacttgaacccgtgacctttc 1217111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 54374389 - 54374482
Alignment:
Q  131 gggaaggggtcccaccattt-ggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    |||||||||||||||||||| |||| ||| |||||||||||||||| |||||||||| ||| ||||||||||||||||||||  ||||||||||    
T  54374389 gggaaggggtcccaccattttggtggattgtacgcagccttaccctattttttacacaagaggttgtttccaagacttgaacctgtgacctttc 54374482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 54484846 - 54484753
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttttt 182  Q
    |||||| |||||||||| ||||||||| |||||  |||||  |||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  54484846 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgtttttt 54484753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 98 - 220
Target Start/End: Original strand, 45948848 - 45948972
Alignment:
Q  98 ccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgt 195  Q
    ||||||||| ||||||||| |||||  |||||  | ||||||||||||||| |||||||||| || ||||||||||||| |||||||||| ||| |||||    
T  45948848 ccggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccaattggtgtattgtatgcagccttaccctattttttacacaagaggttgt 45948947  T
Q  196 ttccaagacttgaactcgtgacctt 220  Q
    ||||| || |||||| |||||||||    
T  45948948 ttccaggaattgaacccgtgacctt 45948972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 54032609 - 54032693
Alignment:
Q  137 gggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctt 220  Q
    ||||||||||||| |||||||| || |||||||||||||||||||||||| ||| |||||||||| ||||||||| |||||||||    
T  54032609 gggtcccaccattcggtgtattgtatgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgacctt 54032693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 516567 - 516430
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt---ggtgtattatacgcagccttaccctgttttttaca 185  Q
    |||||| |||||||||| ||||||||| |||||  |||||  ||||||||||||| ||||||   ||| |||| | ||||||||||||||||||||||||    
T  516567 agggcaacccggtgcactaaagctcccgcatacgcagggtcggggaaggggtcccgccattttttggtttattgtgcgcagccttaccctgttttttaca 516468  T
Q  186 c-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    | ||| | |||||||| ||||||||| |||||||||||    
T  516467 caagaggctgtttccaggacttgaacccgtgacctttc 516430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 8247707 - 8247825
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaaga 203  Q
    ||||||||| |||||  |||||  ||||||| |||||||||||  ||||||||| |||||| |||||||||||||||||||| ||| | |||||||| ||    
T  8247707 aaagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtattgtacgcaaccttaccctgttttttacacaagaggctgtttccagga 8247806  T
Q  204 cttgaactcgtgacctttc 222  Q
    ||||||| |||||||||||    
T  8247807 cttgaacccgtgacctttc 8247825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 90 - 220
Target Start/End: Original strand, 13730604 - 13730738
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac 186  Q
    |||||| |||||||||| ||||||||| ||||    ||||  |||||||||||||||||||  ||||||||| ||| |||||||||||||||||||||||    
T  13730604 agggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttacac 13730703  T
Q  187 -agaagttgtttccaagacttgaactcgtgacctt 220  Q
     ||| | |||||||| ||||||||| |||||||||    
T  13730704 aagaggctgtttccaggacttgaacccgtgacctt 13730738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 15797375 - 15797284
Alignment:
Q  90 agggcagcccggtgcacaa-agctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttt 180  Q
    |||||| |||||||||| | ||||||||||||   |||||  |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  15797375 agggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 15797284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 34771366 - 34771457
Alignment:
Q  90 agggcagcccggtgcacaa-agctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttt 180  Q
    ||||||||||||||||| | ||||||| ||||   |||||  |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  34771366 agggcagcccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 34771457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 99 - 219
Target Start/End: Original strand, 6411833 - 6411954
Alignment:
Q  99 cggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtt 196  Q
    |||||||| ||||||||| |||||  | ||| ||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||| ||| | ||||    
T  6411833 cggtgcactaaagctcccgcatacgcaaggtctgggaaggggtcccatcatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtt 6411931  T
Q  197 tccaagacttgaactcgtgacct 219  Q
    | |||||||||||| | ||||||    
T  6411932 tacaagacttgaacccatgacct 6411954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 106 - 222
Target Start/End: Original strand, 30928166 - 30928283
Alignment:
Q  106 caaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagac 204  Q
    |||||||||||||||   |||||  ||||||||||||| ||| |||||||||| ||| || ||||||| |||||||||||| ||| | |||||||| |||    
T  30928166 caaagctcccacatatgcagggtccgggaaggggtcccgccaattggtgtattttacacaaccttaccttgttttttacacaagaggctgtttccaggac 30928265  T
Q  205 ttgaactcgtgacctttc 222  Q
    |||||| |||||||||||    
T  30928266 ttgaacccgtgacctttc 30928283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 16735553 - 16735467
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttt-tacacagaagttgtttccaagacttgaactcgtgac 217  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||| | |||||| | ||||||||| ||||||    
T  16735553 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttctaca-agaggctgtttcgaggacttgaacccgtgac 16735467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 22122961 - 22123051
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagttgtttccaagacttgaactcgtgacctttc 222  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||  ||| |||   |||||||| ||||||||| || ||||||||    
T  22122961 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacaca-agagactgtttccaggacttgaacccgcgacctttc 22123051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 25944625 - 25944490
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccacca-tttggtgtattatacgcagccttaccctgttttttacac- 186  Q
    ||||||||| ||||| | |||||||||||||||  |||||  ||||||||||||||||| ||||||||||| ||| ||||||| ||| |||||||||||     
T  25944625 agggcagcctggtgcgctaaagctcccacatacgcagggtcagggaaggggtcccaccattttggtgtattgtactcagccttgcccagttttttacacg 25944526  T
Q  187 agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||| |  ||||||| ||||||||| | |||||||||    
T  25944525 agaggcggtttccaggacttgaacccatgacctttc 25944490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 118 - 181
Target Start/End: Complemental strand, 47624167 - 47624104
Alignment:
Q  118 atacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttt 181  Q
    ||||| |||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  47624167 atacacagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 47624104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 4495714 - 4495764
Alignment:
Q  137 gggtcccaccatttggtgtattatacgcagccttaccctgttttttacaca 187  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4495714 gggtcccaccatttggtgtattgtacgcagccttaccctgttttttacaca 4495764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 31593002 - 31592882
Alignment:
Q  90 agggcagcccggtgcacaa-agctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacag 188  Q
    |||||| |||||||||| | ||||||| ||||   |||||  ||||||| |||||||||||||||||||| |||||||||||||||||||||  ||| ||    
T  31593002 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggagtcccaccatttggtgtattgtacgcagccttaccctgttttacaca-ag 31592904  T
Q  189 aagttgtttccaagacttgaac 210  Q
    | | |||||||| |||||||||    
T  31592903 aggctgtttccaggacttgaac 31592882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 39203669 - 39203537
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacag 188  Q
    |||||| |||||||||| ||||||||| ||||   | |||  |||||||||||||||||||||||||||| |||||| ||||||||||||||  ||| ||    
T  39203669 agggcaacccggtgcactaaagctcccgcatatgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttacaca-ag 39203571  T
Q  189 aagttgtttccaagacttgaactcgtgacctttc 222  Q
    | | |||||| | |||||||||  ||||||||||    
T  39203570 aggctgtttcaaggacttgaacctgtgacctttc 39203537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 187
Target Start/End: Original strand, 45786216 - 45786316
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt--ggtgtattatacgcagccttaccctgttttttacac 186  Q
    |||||| |||||||||| ||||||||  ||| |  |||||  ||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||    
T  45786216 agggcaacccggtgcactaaagctccagcattcgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacac 45786315  T
Q  187 a 187  Q
    |    
T  45786316 a 45786316  T

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Target: chr3; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 186
Target Start/End: Original strand, 353351 - 353450
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac 186  Q
    |||||| |||||||||| ||||||||| ||||    ||||  |||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||    
T  353351 agggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacac 353450  T

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Target: chr3; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 92 - 187
Target Start/End: Complemental strand, 19731155 - 19731059
Alignment:
Q  92 ggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacaca 187  Q
    ||||||||||||||| ||||||||  |||||| || || |||||| ||||||||||| | |||||||| |||||| ||||||| |||||||||||||    
T  19731155 ggcagcccggtgcactaaagctcctgcatacacagagtctgggaaagggtcccaccaataggtgtattgtacgcaaccttaccttgttttttacaca 19731059  T

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Target: chr3; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 215
Target Start/End: Original strand, 10795468 - 10795554
Alignment:
Q  132 ggaaggggtcccaccattt--ggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtg 215  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||| |||||||| ||| | |||||||| ||||||||| ||||    
T  10795468 ggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 10795554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 14987072 - 14986990
Alignment:
Q  131 gggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaac 210  Q
    ||||| |||||||||||||  ||||||||| ||||||||||||||||||||||||||| ||| | |||||||| |||||||||    
T  14987072 gggaatgggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaac 14986990  T

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Target: chr3; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 49013517 - 49013575
Alignment:
Q  131 gggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacaca 187  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||    
T  49013517 gggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacaca 49013575  T

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Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 220
Target Start/End: Complemental strand, 7943127 - 7943013
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagact 205  Q
    ||||||||| |||||  | ||| ||| ||||| |||||||||||| |||||| ||||||| |||||||||||||||| || ||| | |||||||| ||||    
T  7943127 aaagctcccgcatacgcatggtctggaaagggatcccaccatttgatgtattgtacgcagtcttaccctgttttttagacaagatgctgtttccaggact 7943028  T
Q  206 tgaactcgtgacctt 220  Q
    ||||  |||||||||    
T  7943027 tgaatccgtgacctt 7943013  T

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Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 9276366 - 9276321
Alignment:
Q  142 ccaccatttggtgtattatacgcagccttaccctgttttttacaca 187  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  9276366 ccaccatttggtgtattgtacgcagccttaccctgttttttacaca 9276321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 125 - 210
Target Start/End: Complemental strand, 9607324 - 9607236
Alignment:
Q  125 gggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaac 210  Q
    |||| ||||||||||||||| ||||  ||||||||| ||||||||||||||||||||||||| | ||| | |||||||| |||||||||    
T  9607324 gggtctgggaaggggtcccaacattattggtgtattctacgcagccttaccctgttttttacgcaagaggctgtttccaggacttgaac 9607236  T

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Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 185
Target Start/End: Original strand, 31904858 - 31904955
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaagggg-tcccaccatttggtgtattatacgcagccttaccctgttttttaca 185  Q
    ||||||||| ||||||| ||||||||| || || || | | |||||||||| ||||||||||||||||||| ||||||| | ||||||||||||||||    
T  31904858 agggcagcctggtgcactaaagctcccgcacacgtaagatctgggaagggggtcccaccatttggtgtattgtacgcagtcataccctgttttttaca 31904955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 187
Target Start/End: Complemental strand, 55401330 - 55401233
Alignment:
Q  92 ggcagcccggtgcacaaa-gctcccacatacatagggtttgggaaggggtcccaccattt-ggtgtattatacgcagccttaccctgttttttacaca 187  Q
    |||||||||||||| ||| |||||| |||||  | |||  | |||||||||||||||||| |||||||||||||||| |||| |||||||||||||||    
T  55401330 ggcagcccggtgcaaaaaagctcccgcatacggaaggtccgagaaggggtcccaccattttggtgtattatacgcagtcttaacctgttttttacaca 55401233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 222
Target Start/End: Original strand, 45620881 - 45620965
Alignment:
Q  140 tcccaccatttggtgtattatacgcagccttaccctg-ttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||||| ||| | ||||||||  |||||||| |||||||||||    
T  45620881 tcccaccaattggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccagaacttgaacccgtgacctttc 45620965  T

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Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 172
Target Start/End: Original strand, 52926221 - 52926304
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttac 172  Q
    |||||| |||||||| | ||||||||| |||||  |||||  ||||||| |||||||||||||||||||| |||||||||||||    
T  52926221 agggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaaggtgtcccaccatttggtgtattgtacgcagccttac 52926304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 187
Target Start/End: Original strand, 44403559 - 44403656
Alignment:
Q  92 ggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggt-gtattatacgcagccttaccctgttttttacaca 187  Q
    ||||||||||||||| |||||| |  ||||| ||||||  |||||||||||||||||||| || ||||| | |||||||||||| ||| |||||||||    
T  44403559 ggcagcccggtgcactaaagcttcagcatacgtagggtccgggaaggggtcccaccattttgtggtattctccgcagccttaccttgtcttttacaca 44403656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 221
Target Start/End: Original strand, 7696945 - 7697020
Alignment:
Q  145 ccatttggtgtattatacgcagccttaccctgttttttacacagaagttgtttccaagacttgaactcgtgaccttt 221  Q
    |||||||||||||| |||||||||||||||||||||  ||| |||   |||||||| ||||||||| ||||||||||    
T  7696945 ccatttggtgtattgtacgcagccttaccctgttttacaca-agagactgtttccaggacttgaacccgtgaccttt 7697020  T

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Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 33926195 - 33926104
Alignment:
Q  132 ggaaggggtcccaccatt-tggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||||| |||||||| ||| | | |||||| ||||||||| | |||||||||    
T  33926195 ggaaggggtcccaccattatggtgtattgtacacagccttaccctgt-ttttacacaagaggctatttccaggacttgaacccatgacctttc 33926104  T

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Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 222
Target Start/End: Original strand, 52428526 - 52428614
Alignment:
Q  136 ggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttcca-agacttgaactcgtgacctttc 222  Q
    ||||| |||| |||||||||||| |||||||||||||||||| |||||||| ||| | || ||||| |||||| ||| |||||||||||    
T  52428526 ggggttccactatttggtgtattgtacgcagccttaccctgtattttacacaagaggctgcttccagagacttaaacccgtgacctttc 52428614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 8410904 - 8410966
Alignment:
Q  124 agggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac 186  Q
    ||||| || |||| |||||||||| |||||||||| |  ||||||||||||||||||||||||    
T  8410904 agggtctgagaagaggtcccaccagttggtgtattgtgagcagccttaccctgttttttacac 8410966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 221
Target Start/End: Complemental strand, 29106665 - 29106571
Alignment:
Q  128 tttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgaccttt 221  Q
    ||||| ||||| |||||| |||||||||||| |||| | ||||| ||| |||||||||| ||| ||||||| ||||||||| || ||||| ||||    
T  29106665 tttggaaagggatcccacaatttggtgtattgtacgtaaccttatcctattttttacacaagaggttgttttcaagacttgtacccgtgatcttt 29106571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 5173721 - 5173856
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt--ggtgtattatacgcagccttaccctgttttttacac 186  Q
    |||||| |||||||||| ||||||||| |||||  | |||  ||||||||| ||||||||||  ||||||||  | ||| ||||||  ||||||| ||||    
T  5173721 agggcaacccggtgcactaaagctcccgcatacgcaaggtccgggaaggggccccaccatttttggtgtattgcatgcaaccttactttgttttt-acac 5173819  T
Q  187 a-gaagttgtttccaagacttgaactcgtgacctttc 222  Q
    | || |||||||||| ||||||||| |||||||||||    
T  5173820 aagaggttgtttccaggacttgaacccgtgacctttc 5173856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 25517172 - 25517265
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttttt 182  Q
    |||||| |||||||||| ||||||||  |||||  ||| |  |||||||||||||||||||| ||||||| ||||||||| || | ||||||||    
T  25517172 agggcaacccggtgcactaaagctccagcatacgcaggatccgggaaggggtcccaccattttgtgtattgtacgcagccatatcttgtttttt 25517265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 187
Target Start/End: Complemental strand, 19751731 - 19751635
Alignment:
Q  92 ggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacaca 187  Q
    ||||||||||||||| |||||||   |||||| |  || |||||| ||||||||||| | |||||||| |||||| ||||||| || ||||||||||    
T  19751731 ggcagcccggtgcactaaagctcatgcatacacaaagtctgggaaagggtcccaccaataggtgtattgtacgcaaccttaccttgatttttacaca 19751635  T

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Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 222
Target Start/End: Original strand, 1121286 - 1121361
Alignment:
Q  148 tttggtgtattatacgcagccttaccctgttttttacaca-gaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||||| ||||||| || ||| | ||| ||||||| ||||||||||||| ||||| ||| |||||||||||    
T  1121286 tttggtgtattgtacgcagtctcaccttatttcttacacaagaagttgtttccaggacttaaacacgtgacctttc 1121361  T

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Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 10870025 - 10870087
Alignment:
Q  160 tacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||||||||||| ||||||||| ||| | |||||||| ||||||||| |||||||||||    
T  10870025 tacgcagccttaccctg-tttttacacaagaggctgtttccaggacttgaacccgtgacctttc 10870087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 182
Target Start/End: Complemental strand, 33235641 - 33235594
Alignment:
Q  135 aggggtcccaccatttggtgtattatacgcagccttaccctgtttttt 182  Q
    |||||||||||||||| ||||||| ||| ||| |||||||||||||||    
T  33235641 aggggtcccaccatttagtgtattgtacacagtcttaccctgtttttt 33235594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 213
Target Start/End: Original strand, 829452 - 829570
Alignment:
Q  98 ccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccacca-tttggtgtattatacgcagccttaccctgttttttacac-agaagttg 194  Q
    ||||||||| ||||||||  |||||  |||||| ||||||||||||||||| ||||||||||| |||||| | ||||  |||| |||| || ||| ||||    
T  829452 ccggtgcactaaagctcctgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgcaactttactatgttctttagacaagaggttg 829551  T
Q  195 tttccaagacttgaactcg 213  Q
    |||| |  |||||||||||    
T  829552 tttctagaacttgaactcg 829570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 187
Target Start/End: Original strand, 50624955 - 50625053
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacaca 187  Q
    ||||||||||||||||| ||||||||||| |||  ||||    |||||| |||||||||  ||||||||| |||||  ||||||||| |||| ||||||    
T  50624955 agggcagcccggtgcactaaagctcccacttacgcagggcccaggaaggcgtcccaccaaatggtgtattgtacgctaccttacccttttttatacaca 50625053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 43114918 - 43114995
Alignment:
Q  137 gggtcccaccatttggtgtattatacgcag-ccttaccctg-ttttttacac-agaagttgtttccaagacttgaact 211  Q
    |||||||||||||||||||||| || | || |||||||||| |||||||||| ||| | |||||||| ||||||||||    
T  43114918 gggtcccaccatttggtgtattgtaggtagcccttaccctgtttttttacacaagaggctgtttccaggacttgaact 43114995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 26292450 - 26292394
Alignment:
Q  124 agggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttt 180  Q
    |||||| |||||||| ||||| ||||||||||||  ||||| | |||||||||||||    
T  26292450 agggttcgggaagggatcccatcatttggtgtatcgtacgcggtcttaccctgtttt 26292394  T

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Target: chr7 (Bit Score: 72; Significance: 7e-33; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 18747620 - 18747485
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctg-ttttttacaca 187  Q
    ||||||||||||||||| ||||||||| |||||  ||||||  |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  18747620 agggcagcccggtgcactaaagctcccgcatacgcagggttcaggaaggggtcccaccaattggtgtattatacgcagccttaccctgcttttttacaca 18747521  T
Q  188 gaa-gttgtttccaagacttgaactcgtgacctttc 222  Q
     || | |||||||||||||||| | |||||||||||    
T  18747520 aaaggctgtttccaagacttgatcccgtgacctttc 18747485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 7879771 - 7879639
Alignment:
Q  90 agggcagcccggtgcaca-aagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-a 187  Q
    |||||| ||||||||||  |||||||| |||||  |||||  |||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |    
T  7879771 agggcaacccggtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgttttttacacaa 7879672  T
Q  188 gaagttgtttccaagacttgaactcgtgacctt 220  Q
    ||  ||||||||| ||||||||| |||||||||    
T  7879671 gagattgtttccaggacttgaacccgtgacctt 7879639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 97 - 222
Target Start/End: Original strand, 2541028 - 2541155
Alignment:
Q  97 cccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttg 194  Q
    |||||||||| ||||||||| |||||  ||||   |||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||| | ||    
T  2541028 cccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccatttggtgtatagtacgcagccttaccctgttttttacacaagaggctg 2541127  T
Q  195 tttccaagacttgaactcgtgacctttc 222  Q
    |||||| ||||||||| |||||||||||    
T  2541128 tttccaggacttgaacccgtgacctttc 2541155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 42391102 - 42391234
Alignment:
Q  90 agggcagcccggtgcacaa-agctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacag 188  Q
    |||||| |||||||||| | ||||||| ||||   |||||  |||||||||||||||||||||||||||| |||||||||||||||||||||  ||| ||    
T  42391102 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacaca-ag 42391200  T
Q  189 aagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||| |||||||| ||||||||| |||||||||||    
T  42391201 aagctgtttccaggacttgaacccgtgacctttc 42391234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 27629725 - 27629633
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| | |||||||| ||||||||| |||||||||||    
T  27629725 gggaaggggtcccaccatttggtgtattttacgcaaccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttc 27629633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 91 - 187
Target Start/End: Original strand, 28362149 - 28362245
Alignment:
Q  91 gggcagcccggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacaca 187  Q
    |||| |||||||||||||||||||||||||   | ||| ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||    
T  28362149 gggccgcccggtgcacaaagctcccacatatgcaaggtctgggaaggggtcccaccatttggtgtattgtacgcagccttaccaagttttttacaca 28362245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 33871930 - 33872045
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagact 205  Q
    ||||||| | |||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||| ||| |||||||||| ||||    
T  33871930 aaagctctcgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttatcctg-tttttacacaagaggttgtttccaggact 33872028  T
Q  206 tgaactcgtgacctttc 222  Q
    ||||| || ||||||||    
T  33872029 tgaacccgcgacctttc 33872045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 222
Target Start/End: Original strand, 11617633 - 11617724
Alignment:
Q  132 ggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||| |||||||||| |||||||||  ||||||||||    
T  11617633 ggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttccaggacttgaacctgtgacctttc 11617724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 18512455 - 18512588
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-a 187  Q
    |||||| ||| |||||| ||||||||| |||||  |||||  ||||||||||||||||||| |||||||| ||||||||||||||||  ||||||||| |    
T  18512455 agggcaacccagtgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaa 18512553  T
Q  188 gaagttgtttccaagacttgaactcgtgacctttc 222  Q
    || |||||||||| ||||||||| |||||||||||    
T  18512554 gatgttgtttccaggacttgaacccgtgacctttc 18512588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 19265946 - 19265814
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacaca- 187  Q
    ||||||||||||||||| ||||||||||||||  |||| |  |||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||     
T  19265946 agggcagcccggtgcactaaagctcccacatatgtagg-tccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctcttttt-acacaa 19265849  T
Q  188 gaagttgtttccaagacttgaactcgtgacctttc 222  Q
    |  | ||| |||||||||||||| |||||||||||    
T  19265848 gcggctgtatccaagacttgaacccgtgacctttc 19265814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 32233137 - 32233270
Alignment:
Q  90 agggcagcccggtgcaca-aagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-a 187  Q
    |||||||||||||||||  |||||||| ||||   ||||||||||||||  ||||||||||||||||| ||||||| ||||||||||| ||||||||| |    
T  32233137 agggcagcccggtgcactgaagctccctcatatgcagggtttgggaaggaatcccaccatttggtgtaatatacgctgccttaccctg-tttttacacaa 32233235  T
Q  188 gaagttgtttccaagacttgaactcgtgacctttc 222  Q
    || |||||||||| ||||||||| | |||||||||    
T  32233236 gaggttgtttccaggacttgaacccatgacctttc 32233270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 187
Target Start/End: Original strand, 14099009 - 14099106
Alignment:
Q  90 agggcagcccggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacaca 187  Q
    ||||||||| |||||| ||| ||||  ||||| ||||||| |||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||    
T  14099009 agggcagcctggtgcaaaaatctcctgcatacgtagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacaca 14099106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 187
Target Start/End: Original strand, 14409026 - 14409123
Alignment:
Q  90 agggcagcccggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacaca 187  Q
    ||||||||| |||||| ||| ||||  ||||| ||||||| |||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||    
T  14409026 agggcagcctggtgcaaaaatctcctgcatacgtagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacaca 14409123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 21172011 - 21172143
Alignment:
Q  90 agggcagcccggtgcacaa-agctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacag 188  Q
    |||||| |||||||||| | ||||||| ||||   |||||  |||||||||||||||||||||||||||| |||||||||||||||||||||  ||| ||    
T  21172011 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacaca-ag 21172109  T
Q  189 aagttgtttccaagacttgaactcgtgacctttc 222  Q
    | | |||||||| ||||||||| |||||||||||    
T  21172110 aggctgtttccaggacttgaacccgtgacctttc 21172143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 46354287 - 46354195
Alignment:
Q  131 gggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctt 220  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||| ||| |||||||||| ||||||||| |||||||||    
T  46354287 gggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgacctt 46354195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 47716594 - 47716460
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac 186  Q
    |||||| |||||||||| ||||||||| ||||    ||||  |||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||    
T  47716594 agggcaacccggtgcaccaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacac 47716495  T
Q  187 -agaagttgtttccaagacttgaactcgtgacctt 220  Q
     ||| | |||||||| ||||||||| |||||||||    
T  47716494 aagaggctgtttccaggacttgaacccgtgacctt 47716460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 42798760 - 42798670
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctt 220  Q
    ||||| |||||||||||||||||||||| |||||||||||||| |||||||||||| |||   |||||||||||||||||| |||||||||    
T  42798760 gggaaagggtcccaccatttggtgtattgtacgcagccttaccttgttttttacacaagagactgtttccaagacttgaacccgtgacctt 42798670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 48735124 - 48735257
Alignment:
Q  90 agggcagcccggtgcacaa-agctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacag 188  Q
    |||||| |||||||||| | ||||||| ||||   |||||  |||||||||||||||||||||||||||| |||||||||||||| ||||||  ||| ||    
T  48735124 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccgtgttttacaca-ag 48735222  T
Q  189 aagttgtttccaa-gacttgaactcgtgacctttc 222  Q
    | ||||||||||| ||||||||| |||||||||||    
T  48735223 aggttgtttccaaggacttgaacccgtgacctttc 48735257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 220
Target Start/End: Original strand, 35334825 - 35334948
Alignment:
Q  97 cccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagttgt 195  Q
    |||||||||| ||||||||  |||||  |||||  ||||||||||||||||||| |||||||| ||| ||| ||||||||||||||||||| ||   |||    
T  35334825 cccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagtcttaccctgttttttacac-gagactgt 35334923  T
Q  196 ttccaagacttgaactcgtgacctt 220  Q
    ||||| |||||||||||||||||||    
T  35334924 ttccaggacttgaactcgtgacctt 35334948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 10693117 - 10693207
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagttgtttccaagacttgaactcgtgacctttc 222  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||  ||| ||| | |||||||| ||||||||| |||||||||||    
T  10693117 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctcttttacaca-agaggctgtttccaggacttgaacccgtgacctttc 10693207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 31591153 - 31591243
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||||||||||||||  |||||| ||||||||||||| |||||||  ||| ||| |||||||||| |||||||||||||||||||||    
T  31591153 gggaaggggtcccaccatttattgtattgtacgcagccttactctgttttacaca-agaggttgtttccaggacttgaactcgtgacctttc 31591243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 42805659 - 42805525
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac 186  Q
    |||||| |||||||||| ||||||||| ||||    ||||  |||||||||||||||||||  ||||||||| ||| |||||||||||||||||||||||    
T  42805659 agggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttacac 42805560  T
Q  187 -agaagttgtttccaagacttgaactcgtgacctt 220  Q
     ||| | |||||||| ||||||||| |||||||||    
T  42805559 aagaggctgtttccaggacttgaacccgtgacctt 42805525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 222
Target Start/End: Original strand, 19426939 - 19427025
Alignment:
Q  137 gggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    |||||||||||||||||||||| ||||||| |||||||| |||||||||| ||| | |||||||| ||||||||| |||||||||||    
T  19426939 gggtcccaccatttggtgtattgtacgcagtcttaccctattttttacacaagaggctgtttccaggacttgaacccgtgacctttc 19427025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 23419719 - 23419809
Alignment:
Q  132 ggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgaccttt 221  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||| | ||||||||  ||||||||  |||||||||    
T  23419719 ggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccagaacttgaacctgtgaccttt 23419809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 32758392 - 32758260
Alignment:
Q  90 agggcagcccggtgcacaa-agctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacag 188  Q
    |||||| |||||||||| | ||||||| ||||   |||||  |||||||||||||||||||||||||||| ||| |||||||||||||||||  ||| ||    
T  32758392 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctgttttacaca-ag 32758294  T
Q  189 aagttgtttccaagacttgaactcgtgacctttc 222  Q
    | | |||||||| |||||||||  ||||||||||    
T  32758293 aggctgtttccaggacttgaacctgtgacctttc 32758260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 114 - 217
Target Start/End: Original strand, 15108424 - 15108527
Alignment:
Q  114 ccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactc 212  Q
    ||||||||| ||||||||||||||| |||||| ||||| |||||| ||| |||||||||| || ||||||||| ||||  |||||||| |||||||||||    
T  15108424 ccacatacacagggtttgggaagggatcccactatttgatgtattgtacacagccttaccttg-tttttacacaagaaactgtttccaggacttgaactc 15108522  T
Q  213 gtgac 217  Q
    |||||    
T  15108523 gtgac 15108527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 43557608 - 43557471
Alignment:
Q  90 agggcagcccggtgcac--aaagctcccacatacatagggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttaca 185  Q
    |||||| ||||||||||  ||||||||| |||||  || ||  |||| ||||||||||||||  ||||||||| ||||||||||||| ||||||||||||    
T  43557608 agggcaacccggtgcactaaaagctcccgcatacgcagagtccgggagggggtcccaccattattggtgtattgtacgcagccttactctgttttttaca 43557509  T
Q  186 c-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    | ||| | |||||||| ||||||||| | |||||||||    
T  43557508 caagaggctgtttccaggacttgaacccatgacctttc 43557471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 217
Target Start/End: Original strand, 8148988 - 8149077
Alignment:
Q  130 tgggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttttt-acac-agaagttgtttccaagacttgaactcgtgac 217  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||| |||||| |||| ||| || |||| || ||||||||||||||||    
T  8148988 tgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttaacacaagaggtagttttcaggacttgaactcgtgac 8149077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 40463990 - 40463917
Alignment:
Q  108 aagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttt 181  Q
    |||||||| |||||  |||||  | |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40463990 aagctcccgcatacgcagggtccgagaaggggtcccaccatttggtgtattatacgcagccttacccagttttt 40463917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 19266564 - 19266488
Alignment:
Q  108 aagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttac 184  Q
    |||||||| |||||  |||||  |||||||| |||||| |||||||||||| |||||||||||||||||||||||||    
T  19266564 aagctcccgcatacgcagggtccgggaagggatcccacaatttggtgtattgtacgcagccttaccctgttttttac 19266488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 29907551 - 29907418
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt-ggtgtattatacgcagccttaccctgttttttacac- 186  Q
    |||||| |||||||||| ||||||||| ||||||  ||||  |||| ||||||||||||||| ||||||||  |||||||||||| || ||||||||||     
T  29907551 agggcaacccggtgcactaaagctcccgcataca--gggtccgggatggggtcccaccattttggtgtattgaacgcagccttacactattttttacaca 29907454  T
Q  187 agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||| | |||||| | ||||||||| |||||||||||    
T  29907453 agaggctgtttctaggacttgaacccgtgacctttc 29907418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 209
Target Start/End: Original strand, 34626228 - 34626330
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacaca-gaagttgtttccaagact 205  Q
    ||||||||| |||||  |||||  |||||||| |||||||||||||||||||  |||||||||||||||| |||||||||| || | |||||||| ||||    
T  34626228 aaagctcccgcatacgcagggtccgggaagggatcccaccatttggtgtattgaacgcagccttaccctg-tttttacacaggaggctgtttccaggact 34626326  T
Q  206 tgaa 209  Q
    ||||    
T  34626327 tgaa 34626330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 181
Target Start/End: Complemental strand, 38604653 - 38604567
Alignment:
Q  97 cccggtgcac--aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttt 181  Q
    ||||||||||  ||||||||| |||||  |||||  || |||||||| |||||||||||||||| ||||||||||||||||||||||    
T  38604653 cccggtgcacttaaagctcccgcatacgcagggtccggaaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttt 38604567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 210
Target Start/End: Complemental strand, 21566564 - 21566446
Alignment:
Q  95 agcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt-ggtgtattatacgcagccttaccctgttttttacac-agaag 191  Q
    |||||||||||| ||||||||| ||||   |||||| |||||||||||| ||||||| |||||||| ||||||| ||| | ||||||||||||| ||| |    
T  21566564 agcccggtgcactaaagctcccgcatatgcagggttcgggaaggggtcctaccattttggtgtattgtacgcagtcttcctctgttttttacacaagagg 21566465  T
Q  192 ttgtttccaagacttgaac 210  Q
      |||||||||||||||||    
T  21566464 cggtttccaagacttgaac 21566446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 11741884 - 11741794
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    |||||||| ||||||||||||||||||| |||||||||||||||  | |||||||| ||||| ||||| || ||||||||| | |||||||||    
T  11741884 gggaagggatcccaccatttggtgtattgtacgcagccttaccc--tattttacactagaagctgttttcaggacttgaacccatgacctttc 11741794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 13805233 - 13805101
Alignment:
Q  90 agggcagcccggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagcctta-ccctgttttttacacag 188  Q
    |||| ||||| ||||||||||||||| |||||  |||||   ||||| ||||||||||||||||||||| ||| |||||||| |||||||||  || |||    
T  13805233 agggtagcccagtgcacaaagctcccgcatacgcagggtccaggaagtggtcccaccatttggtgtattgtacacagccttacccctgttttacac-cag 13805135  T
Q  189 aagttgtttccaagacttgaactcgtgacctttc 222  Q
    | | | |||||| ||||||||| ||| |||||||    
T  13805134 aggctatttccaggacttgaacccgttacctttc 13805101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 187
Target Start/End: Complemental strand, 23231681 - 23231592
Alignment:
Q  99 cggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacaca 187  Q
    |||||||| |||||| || |||||  |||||| |||||||||||||| |||| ||||||||||||||||||||||| | | |||||||||    
T  23231681 cggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagccttaccttatattttacaca 23231592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 170
Target Start/End: Original strand, 27889318 - 27889399
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagcctt 170  Q
    |||||| ||||||| || ||||||||| |||||  |||||  |||||||||||||||||||||||||||| |||||||||||    
T  27889318 agggcaacccggtgtaccaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagcctt 27889399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 222
Target Start/End: Original strand, 47077877 - 47077989
Alignment:
Q  109 agctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagttgtttccaagacttga 208  Q
    ||||||| ||||  |||||||||||||||||||||||||||| ||||||| |||||| | |||| || ||||  ||| |||   |||||||| |||||||    
T  47077877 agctcccgcatatgtagggtttgggaaggggtcccaccattttgtgtattgtacgcaactttactctattttacaca-agagactgtttccaggacttga 47077975  T
Q  209 actcgtgacctttc 222  Q
    || |||||||||||    
T  47077976 acccgtgacctttc 47077989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 222
Target Start/End: Original strand, 48123531 - 48123620
Alignment:
Q  134 aaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||||||||||||||||||| || ||||  |||||||||| ||||||| ||| | |||||||| ||||||||| | |||||||||    
T  48123531 aaggggtcccaccatttggtgtattgtatgcagttttaccctgttatttacacaagaggctgtttccaggacttgaacccatgacctttc 48123620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 1408548 - 1408492
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacaca 187  Q
    ||||||||||||||||||||| |||||| ||| |||||||||| |||||||||||||    
T  1408548 gggaaggggtcccaccatttgctgtattgtacacagccttaccttgttttttacaca 1408492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 7645047 - 7644955
Alignment:
Q  132 ggaaggggtcccaccattt-ggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    |||||||||||||| |||| |||||||| |||||   ||||||||||||||||||| ||| | |||||||| ||||||||| |||||||||||    
T  7645047 ggaaggggtcccacaattttggtgtattgtacgctatcttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttc 7644955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 16341412 - 16341277
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatac-atagggtttgggaaggggtcccaccattt-ggtgtattatacgcagccttaccctgttttttacac 186  Q
    ||||||||||||||||| ||||||||| ||||  ||||| |  |||||| || |||||||||| |||||||| |||| ||||||||||||||||||||||    
T  16341412 agggcagcccggtgcaccaaagctcccgcatatgatagg-tccgggaagagggcccaccattttggtgtattgtacgtagccttaccctgttttttacac 16341314  T
Q  187 -agaagttgtttccaagacttgaactcgtgacctttc 222  Q
     ||| | |||||| |  |||||||| |||||||||||    
T  16341313 aagaggctgtttctagaacttgaacccgtgacctttc 16341277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 220
Target Start/End: Original strand, 38262206 - 38262330
Alignment:
Q  98 ccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgt 195  Q
    ||||||||| ||||||||| |||||  || ||| |||||||||||||| ||||||||||||| || ||| | ||||| | |||||||||| |||   |||    
T  38262206 ccggtgcactaaagctcccgcatacgcagtgttcgggaaggggtcccatcatttggtgtattgtatgcaacattaccatattttttacacaagagactgt 38262305  T
Q  196 ttccaagacttgaactcgtgacctt 220  Q
    ||||| ||||||||| |||||||||    
T  38262306 ttccaggacttgaacccgtgacctt 38262330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 42476961 - 42476913
Alignment:
Q  132 ggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttt 180  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  42476961 ggaaggggtcccaccatttggtgtattgtacgcagccttaccttgtttt 42476913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 35203556 - 35203438
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccattt--ggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaaga 203  Q
    ||||||||| ||||| ||| |||  ||||||| |||||||||||  ||| |||| ||||||| |||| |||||||||||||| |||   |||||||| ||    
T  35203556 aaagctcccgcatacgtagagttcaggaagggatcccaccatttttggtatattgtacgcagtcttatcctgttttttacacaagagaatgtttccagga 35203457  T
Q  204 cttgaactcgtgacctttc 222  Q
    ||||||| |||||||||||    
T  35203456 cttgaacccgtgacctttc 35203438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 210
Target Start/End: Original strand, 2662985 - 2663057
Alignment:
Q  137 gggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagttgtttccaagacttgaac 210  Q
    |||||||||||||||||||||| |||||||||||||||| ||||  ||| ||| | |||||||| |||||||||    
T  2662985 gggtcccaccatttggtgtattgtacgcagccttaccctattttacaca-agaggctgtttccaggacttgaac 2663057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 222
Target Start/End: Complemental strand, 12473378 - 12473303
Alignment:
Q  148 tttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||||| |||||| ||||||||||||||| |||| ||| ||||||| || ||||||||| | |||||||||    
T  12473378 tttggtgtattgtacgcatccttaccctgtttttgacacaagaggttgtttgcaggacttgaacccatgacctttc 12473303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 187
Target Start/End: Original strand, 22698976 - 22699070
Alignment:
Q  97 cccggtgcacaa-agctcccacatacatagggtttgggaag-gggtcccaccattt--ggtgtattatacgcagccttaccctgttttttacaca 187  Q
    |||||||||| | ||||||| |||||| |||||  |||||  ||||||||||||||  |||||||| ||||||| ||||||||||||||||||||    
T  22698976 cccggtgcactatagctcccgcatacacagggtccgggaaaagggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttacaca 22699070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 28078176 - 28078227
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttttt 182  Q
    ||||||||||||||||||||||||||||  | ||| ||||||||||||||||    
T  28078176 gggaaggggtcccaccatttggtgtattgcatgcaaccttaccctgtttttt 28078227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 182
Target Start/End: Original strand, 3469195 - 3469272
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccacca--tttggtgtattatacgcagccttaccctgtttttt 182  Q
    ||||||||| |||||| ||||| | |||||||||||| |||  ||||||||||| |||||| || |||||||||||||    
T  3469195 aaagctcccgcatacacagggtctaggaaggggtcccgccatttttggtgtattgtacgcaaccgtaccctgtttttt 3469272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 35787313 - 35787363
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttt 181  Q
    ||||||||||||| |||||||||||||| |||||| ||||||| |||||||    
T  35787313 gggaaggggtcccgccatttggtgtattgtacgcaaccttaccatgttttt 35787363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 36267827 - 36267900
Alignment:
Q  98 ccggtgcac-aaagctcccacatacatagggtttgggaag-gggtcccaccatttggtgtattatacgcagcct 169  Q
    ||||||||| ||||||||| |||||| |||||| |||||  |||||| ||||||||||||||| ||||||||||    
T  36267827 ccggtgcactaaagctcccgcatacacagggttcgggaaatgggtccaaccatttggtgtattgtacgcagcct 36267900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 170
Target Start/End: Complemental strand, 39124028 - 39123945
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccacca--tttggtgtattatacgcagcctt 170  Q
    ||||||||  ||||||| ||||||||| |||||  |||||  |||||||||||||||||  ||||||||||| |||||||||||    
T  39124028 agggcagcttggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 39123945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 185
Target Start/End: Original strand, 14732831 - 14732920
Alignment:
Q  98 ccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt--ggtgtattatacgcagccttaccctgttttttaca 185  Q
    ||||||||| ||||||||| |||| | |||||| ||||||| ||  ||||||||  ||||||||  |||||||||||||||||||||||||    
T  14732831 ccggtgcactaaagctcccgcataaacagggttcgggaaggagtttcaccatttttggtgtattg-acgcagccttaccctgttttttaca 14732920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 17048859 - 17048914
Alignment:
Q  131 gggaaggggtcccaccattt-ggtgtattatacgcagccttaccctgttttttaca 185  Q
    |||||||||| ||||||||| |||||||| |||| | |||||||||||||||||||    
T  17048859 gggaaggggttccaccattttggtgtattgtacgtaaccttaccctgttttttaca 17048914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 186
Target Start/End: Original strand, 13792152 - 13792250
Alignment:
Q  90 agggcagcccggtgcacaaa-gctcccacatacatagggtttgggaaggggtcccaccattt-ggtgtattatacgcagccttaccctgttttttacac 186  Q
    |||||||| ||||||||||| |||||  |||||  |||||| | ||||||||||| |||||| |||||||| || |||| ||||||  |||||||||||    
T  13792152 agggcagctcggtgcacaaaagctccagcatacgcagggttcgagaaggggtcccgccatttgggtgtattgtatgcagtcttaccaagttttttacac 13792250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 21139768 - 21139842
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttt 181  Q
    |||||| || |||||| || ||| |||||||||||||||||||||||||| | ||  || |||||| ||||||||    
T  21139768 aaagcttccgcatacacagagttcgggaaggggtcccaccatttggtgtactgtatccaaccttactctgttttt 21139842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 22065720 - 22065587
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacaca- 187  Q
    ||||||||||||| ||| ||| ||||  |||||| |  ||| ||||||||||| ||| ||||| | |||| || ||||| ||||||| ||||| |||||     
T  22065720 agggcagcccggtacactaaaactcctgcatacacatagttcgggaaggggtctcactatttgctttattgtatgcagctttaccctattttt-acacaa 22065622  T
Q  188 gaagttgtttccaagacttgaactcgtgacctttc 222  Q
    || ||||||||||| |||||||||| |||| ||||    
T  22065621 gaggttgtttccaaaacttgaactcatgacttttc 22065587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 222
Target Start/End: Complemental strand, 6736969 - 6736889
Alignment:
Q  142 ccaccatttggtgtattatacgcagccttaccctgttttt-tacacagaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||||||||||| || |||| |||||| ||||||| |||| ||| |||||||  | ||||||||| |||||||||||    
T  6736969 ccaccatttggtgtattgtatgcagtcttaccttgtttttataca-agaggttgttttgaggacttgaacccgtgacctttc 6736889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 144
Target Start/End: Complemental strand, 12268060 - 12268024
Alignment:
Q  108 aagctcccacatacatagggtttgggaaggggtccca 144  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  12268060 aagctctcacatacgtagggtttgggaaggggtccca 12268024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 7e-33; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 46991959 - 46991828
Alignment:
Q  91 gggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-ag 188  Q
    ||||| |||||||||| |||||||||||||||  |||||  ||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||| ||    
T  46991959 gggcaacccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagccttaccctgttttttacacaag 46991860  T
Q  189 aagttgtttccaagacttgaactcgtgacctt 220  Q
    | |||||||||| ||||||||| |||||||||    
T  46991859 aggttgtttccaggacttgaacccgtgacctt 46991828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 46247955 - 46248089
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-a 187  Q
    |||||| |||||| ||| ||||||||| |||||  |||||  |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |    
T  46247955 agggcaacccggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaa 46248054  T
Q  188 gaagttgtttccaagacttgaactcgtgacctttc 222  Q
    || | |||||||||||||||||| |||||| ||||    
T  46248055 gaggctgtttccaagacttgaacccgtgacatttc 46248089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 91 - 222
Target Start/End: Original strand, 18724549 - 18724681
Alignment:
Q  91 gggcagcccggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-aga 189  Q
    |||||||  |||||||||||||||| ||||  ||||||  ||||||||||||||  |||||||||||| ||| ||||||||||||||||||||||| |||    
T  18724549 gggcagcttggtgcacaaagctcccgcatatgtagggtccgggaaggggtcccaagatttggtgtattgtacacagccttaccctgttttttacacaaga 18724648  T
Q  190 agttgtttccaagacttgaactcgtgacctttc 222  Q
     | |||||||| ||||||||| |||||||||||    
T  18724649 ggctgtttccaggacttgaacccgtgacctttc 18724681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 222
Target Start/End: Original strand, 32632594 - 32632692
Alignment:
Q  124 agggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||| | |||||||| ||||||||| |||||||||||    
T  32632594 agggtttgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacttgaacccgtgacctttc 32632692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 220
Target Start/End: Original strand, 23768340 - 23768454
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagact 205  Q
    ||||||||| |||||  ||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| | |||||||| ||||    
T  23768340 aaagctcccgcatacgcagggtctgggaaggtgtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccatgact 23768439  T
Q  206 tgaactcgtgacctt 220  Q
    |||||  ||||||||    
T  23768440 tgaacctgtgacctt 23768454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 11596667 - 11596535
Alignment:
Q  90 agggcagcccggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-ag 188  Q
    |||| ||||| || |||||||||||| |||||  |||||   |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||    
T  11596667 agggaagccctgttcacaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattatacgcagccttaccctgt-ttttacacaag 11596569  T
Q  189 aagttgtttccaagacttgaactcgtgacctttc 222  Q
    | |||||||| | ||||||||| |||||| ||||    
T  11596568 aggttgtttctaggacttgaacccgtgacatttc 11596535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 4349794 - 4349699
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttac 184  Q
    |||||| |||||||||| ||||||||| |||||  |||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4349794 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttac 4349699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 96 - 222
Target Start/End: Original strand, 44485118 - 44485245
Alignment:
Q  96 gcccggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttg 194  Q
    |||||||||||||||||||| ||||| |||| |  |||||||||||| ||||||||||||||| |||||||||||||| ||| |||||||| ||  ||||    
T  44485118 gcccggtgcacaaagctcccgcatacgtaggatccgggaaggggtccaaccatttggtgtattgtacgcagccttaccatgtcttttacacaagtggttg 44485217  T
Q  195 tttccaagacttgaactcgtgacctttc 222  Q
    |||||| ||||  ||| |||||||||||    
T  44485218 tttccaggactataacccgtgacctttc 44485245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 86 - 221
Target Start/End: Original strand, 39214956 - 39215094
Alignment:
Q  86 ctagagggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccacca-tttggtgtattatacgcagccttaccctgtttttta 183  Q
    |||| |||||||||||||||| |||||| ||||||||  |||||||||||||||| ||||||| |||||  |||| ||||||||||||||| ||||||||    
T  39214956 ctagtgggcagcccggtgcactaaagcttccacatacgcagggtttgggaaggggacccaccattttggaatattgtacgcagccttacccagtttttta 39215055  T
Q  184 cac-agaagttgtttccaagacttgaactcgtgaccttt 221  Q
    ||| ||| ||||||||||  ||||||||| | |||||||    
T  39215056 cacaagaggttgtttccagtacttgaacttgggaccttt 39215094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 35005281 - 35005145
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt--ggtgtattatacgcagccttaccctgttttttacac 186  Q
    |||||| |||||||||| ||||| ||| |||||  |||||  ||||||||||||||||||||  |||||||| || ||||||||||||||||||||||||    
T  35005281 agggcaacccggtgcactaaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgttttttacac 35005182  T
Q  187 -agaagttgtttccaagacttgaactcgtgacctttc 222  Q
     ||| | ||||| |||||||||||| |||||||||||    
T  35005181 aagaggctgttttcaagacttgaacccgtgacctttc 35005145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 97 - 222
Target Start/End: Complemental strand, 14617187 - 14617060
Alignment:
Q  97 cccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttg 194  Q
    |||||||||| ||||||||| ||||   |||||  |||||||| ||||||||||||||||||| |||||| ||||||| |||| ||||||| ||| | ||    
T  14617187 cccggtgcactaaagctcccgcatatgcagggtccgggaagggatcccaccatttggtgtattgtacgcaaccttaccttgttatttacacaagaggctg 14617088  T
Q  195 tttccaagacttgaactcgtgacctttc 222  Q
    |||||| |||||||||||||||||||||    
T  14617087 tttccaggacttgaactcgtgacctttc 14617060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 18944802 - 18944665
Alignment:
Q  90 agggcagcccggtgcac--aaagctcccacatacatagggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttaca 185  Q
    |||||| ||||||||||  ||||||||| |||||  |||||  |||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||    
T  18944802 agggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtattgtacgcagccttaccctgttttttaca 18944703  T
Q  186 c-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    | ||| | |||||||| | |||||||  ||||||||||    
T  18944702 caagaggctgtttccaggccttgaacctgtgacctttc 18944665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 90 - 220
Target Start/End: Original strand, 20004092 - 20004226
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac 186  Q
    |||||| |||||||||| ||||||||| ||||    |||| ||||||||||||||||||||  ||||||||| |||||||||||||| ||||||||||||    
T  20004092 agggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttacac 20004191  T
Q  187 -agaagttgtttccaagacttgaactcgtgacctt 220  Q
     ||| | |||||||| ||||||||| |||||||||    
T  20004192 gagaggctgtttccaggacttgaacccgtgacctt 20004226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 15505710 - 15505632
Alignment:
Q  99 cggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgt 177  Q
    ||||||||||||||||| |||||  |||||| |||||||||||||||||||||||||||| ||||||| ||||||||||    
T  15505710 cggtgcacaaagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgt 15505632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 222
Target Start/End: Original strand, 25468285 - 25468399
Alignment:
Q  109 agctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttg 207  Q
    ||||||| |||||  ||||| ||||||| ||||| ||||||||||||||| |||||| |||||||||| ||||||||| ||| |||||||||| ||||||    
T  25468285 agctcccgcatacgcagggtctgggaagaggtccaaccatttggtgtattgtacgcaaccttaccctgatttttacacaagaggttgtttccaggacttg 25468384  T
Q  208 aactcgtgacctttc 222  Q
    ||| | |||||||||    
T  25468385 aacccatgacctttc 25468399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 10668383 - 10668247
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac 186  Q
    |||||| |||||||||| ||||||||| |||||  ||||   |||||||||||||||||||  ||||||||| |||||| ||||||| ||||||||||||    
T  10668383 agggcaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccttgttttttacac 10668284  T
Q  187 -agaagttgtttccaagacttgaactcgtgacctttc 222  Q
     ||| | |||||||| ||||||||| |||||||||||    
T  10668283 aagaggctgtttccaggacttgaacccgtgacctttc 10668247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 220
Target Start/End: Original strand, 30395770 - 30395862
Alignment:
Q  131 gggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctt 220  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||| ||| | |||||||| ||||||||| |||||||||    
T  30395770 gggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctt 30395862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 34725100 - 34725232
Alignment:
Q  90 agggcagcccggtgcacaa-agctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacag 188  Q
    |||||| |||||||||| | ||||||| ||||   |||||  |||||||||||||||||||| ||||||| |||||||||||||||||||||  ||| ||    
T  34725100 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttagtgtattgtacgcagccttaccctgttttacaca-ag 34725198  T
Q  189 aagttgtttccaagacttgaactcgtgacctttc 222  Q
    | | |||||||| ||||||||| |||||||||||    
T  34725199 aggctgtttccaggacttgaacccgtgacctttc 34725232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 187
Target Start/End: Original strand, 41319843 - 41319906
Alignment:
Q  124 agggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacaca 187  Q
    |||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  41319843 agggttcgggaaggggtcccatcatttggtgtattgtacgcagccttaccctgttttttacaca 41319906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 222
Target Start/End: Complemental strand, 47214630 - 47214533
Alignment:
Q  124 agggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||  ||| |||   |||||||| ||||||||| |||||||||||    
T  47214630 agggtctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttaaaca-agagactgtttccaggacttgaacccgtgacctttc 47214533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 6983813 - 6983945
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacag 188  Q
    ||||||||||||||||| ||||||||  | |||  |||||  || ||||||||||||||||||||||||| ||||||  |||||||||||||||| || |    
T  6983813 agggcagcccggtgcaccaaagctcctgcctacgcagggtccggaaaggggtcccaccatttggtgtattgtacgcatacttaccctgttttttatac-g 6983911  T
Q  189 aagttgtttccaagacttgaactcgtgacctttc 222  Q
    | | |||||||| |||||||||  ||||||||||    
T  6983912 aggctgtttccaggacttgaacctgtgacctttc 6983945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 99 - 220
Target Start/End: Complemental strand, 6925247 - 6925124
Alignment:
Q  99 cggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtt 196  Q
    |||||||| ||||||||| |||||  ||||   ||||||||||||||||||| |||||||| | |||||||||||||| |||||||||| ||| | | ||    
T  6925247 cggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattcggtgtattgtccgcagccttaccctattttttacacaagaggctatt 6925148  T
Q  197 tccaagacttgaactcgtgacctt 220  Q
    |||| ||||||||| |||||||||    
T  6925147 tccaggacttgaacccgtgacctt 6925124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 12126881 - 12126971
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||  ||| ||||| ||||||||  |||| ||| |||||||||||    
T  12126881 gggaaggggtcccacaatttggtgtattgtacgcagccttaccctgttttacaca-agaagctgtttccagaacttaaacccgtgacctttc 12126971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 19932797 - 19932888
Alignment:
Q  131 gggaaggggtcccaccattt--ggtgtattatacgcagccttaccctgttttttacacagaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||| | ||||| ||||  |||||||| | |||||||||    
T  19932797 gggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaaaggttgtatcca--acttgaacccatgacctttc 19932888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 212
Target Start/End: Original strand, 31442398 - 31442517
Alignment:
Q  97 cccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt-ggtgtattatacgcagccttaccctgtttttt-acacagaagt- 192  Q
    |||||||||| |||||||||||||||| || ||  |||||||||||||||||||| |||||||| |||||| |||||||||||||||| ||| | |||      
T  31442398 cccggtgcaccaaagctcccacatacacagtgtccgggaaggggtcccaccattttggtgtattgtacgcatccttaccctgtttttttacataaaaggc 31442497  T
Q  193 tgtttccaagacttgaactc 212  Q
    |||||| |||||||||||||    
T  31442498 tgtttctaagacttgaactc 31442517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 35253231 - 35253321
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagttgtttccaagacttgaactcgtgacctttc 222  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||  ||| ||| | |||||| | ||||||||| ||||| |||||    
T  35253231 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacaca-agaggctgtttcgaggacttgaacccgtgatctttc 35253321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 10378738 - 10378828
Alignment:
Q  91 gggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttt 180  Q
    |||||||||||||||| ||||||||| ||||   |||||    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  10378738 gggcagcccggtgcactaaagctcccgcatatgcagggtccaagaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 10378828  T

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Target: chr1; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 43768295 - 43768205
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttt 179  Q
    ||||||||||||||||  |||||||||  ||||  ||||| |||||||||||||||||| |||||||||| || |||||||||||||||||    
T  43768295 agggcagcccggtgcattaaagctcccgtatacgcagggtctgggaaggggtcccaccaattggtgtattgtaggcagccttaccctgttt 43768205  T

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Target: chr1; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 182
Target Start/End: Original strand, 18741966 - 18742054
Alignment:
Q  97 cccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt--ggtgtattatacgcagccttaccctgtttttt 182  Q
    |||||||||| ||||||| | |||||  ||||| |||||||||||||||||||||  |||||||| |||||||||||||||||||||||    
T  18741966 cccggtgcactaaagctctcgcatacgcagggtctgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttt 18742054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 38478328 - 38478416
Alignment:
Q  133 gaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagttgtttccaagacttgaactcgtgacctttc 222  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||  ||| ||| | |||||| | ||||||||| |||||||||||    
T  38478328 gaaggggttccaccatttggtgtattgtacgcagccttaccctgttttacaca-agaggctgtttctaggacttgaacccgtgacctttc 38478416  T

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Target: chr1; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 180
Target Start/End: Original strand, 45812541 - 45812630
Alignment:
Q  92 ggcagcccggtgcacaa-agctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttt 180  Q
    |||| |||||||||| | ||||||| ||||   ||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||    
T  45812541 ggcaacccggtgcactagagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtatgcagccttaccctctttt 45812630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 166
Target Start/End: Complemental strand, 45402251 - 45402175
Alignment:
Q  91 gggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcag 166  Q
    ||||| |||||||||| ||||||||| |||||  ||||| ||||||||||||||||||||||||||||| |||||||    
T  45402251 gggcaacccggtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttggtgtattgtacgcag 45402175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 222
Target Start/End: Original strand, 2435796 - 2435923
Alignment:
Q  98 ccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt-ggtgtattatacgcagccttaccctgttttttacaca-gaagttg 194  Q
    ||||||||| ||||||||| ||| |  |||||  || ||||||||||||||||| |||||||| ||||||| |||||||| ||||| ||||| || | ||    
T  2435796 ccggtgcactaaagctcccgcatgcggagggtacggaaaggggtcccaccattttggtgtattgtacgcaggcttaccctatttttcacacaggaggctg 2435895  T
Q  195 tttccaagacttgaactcgtgacctttc 222  Q
    |||||| ||||||||| |||||||||||    
T  2435896 tttccaggacttgaacccgtgacctttc 2435923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 19414593 - 19414502
Alignment:
Q  90 agggcagcccggtgcacaa-agctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttt 180  Q
    |||||| |||||||||| | ||||||| ||||   |||||  |||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  19414593 agggcaacccggtgcactagagctcccgcatatgcagggtacgggaaggggtcccaccatttggtgtattgtacgcagccttaacctgtttt 19414502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 222
Target Start/End: Complemental strand, 20036373 - 20036242
Alignment:
Q  93 gcagcccggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgt-tttttacac-agaa 190  Q
    ||||||||||||||||| ||||  |||||  |||||  |||||||||| |||||||||||||||||  |||||  |||||||| | | ||||||| |||     
T  20036373 gcagcccggtgcacaaaactcctgcatacgcagggtccgggaaggggttccaccatttggtgtattgaacgcaatcttaccctttctctttacacaagag 20036274  T
Q  191 gttgtttccaagacttgaactcgtgacctttc 222  Q
     ||||||||| ||||||||| |||||||||||    
T  20036273 tttgtttccaggacttgaacccgtgacctttc 20036242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 27201763 - 27201669
Alignment:
Q  131 gggaaggggtcccaccattt--ggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||||||| | |||| ||| | |||||||| ||||||||| | |||||||||    
T  27201763 gggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttctgacacaagaggctgtttccaggacttgaacccatgacctttc 27201669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 183
Target Start/End: Original strand, 1517313 - 1517407
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttttta 183  Q
    |||||| |||||||||| ||||||||  |||||  ||||| || ||||||||||||||| |||||||||| |||||||||||| | |||||||||    
T  1517313 agggcaacccggtgcactaaagctcctgcatacgcagggtctgagaaggggtcccaccaattggtgtattgtacgcagccttatcatgtttttta 1517407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 187
Target Start/End: Original strand, 15511150 - 15511251
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt-ggtgtattata--cgcagccttaccctgttttttaca 185  Q
    ||||||||||||||||| ||||||| |||||||  |||||   ||||||||| ||||||||| |||||||| ||  ||||||||||||||||||||||||    
T  15511150 agggcagcccggtgcactaaagctcacacatacgcagggtccaggaaggggtaccaccattttggtgtattgtatccgcagccttaccctgttttttaca 15511249  T
Q  186 ca 187  Q
    ||    
T  15511250 ca 15511251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 187
Target Start/End: Original strand, 20999852 - 20999950
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacaca 187  Q
    ||||||||||||||||| ||||||||| | |||  |||||   |||||||| |||| ||||||||||||| ||||||||||| || |||||||||||||    
T  20999852 agggcagcccggtgcactaaagctcccgcgtacgcagggtgccggaaggggccccatcatttggtgtattgtacgcagccttgccttgttttttacaca 20999950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 21910685 - 21910743
Alignment:
Q  123 tagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttt 181  Q
    ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| |||||    
T  21910685 tagggttcgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttt 21910743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 187
Target Start/End: Complemental strand, 23796621 - 23796523
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacaca 187  Q
    ||||||||||||||||| ||||||||  ||||   ||||| |||||||||||| |||||||||||||||| |||||| ||||||  || ||||||||||    
T  23796621 agggcagcccggtgcactaaagctccagcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgcaaccttacattgatttttacaca 23796523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 24564445 - 24564379
Alignment:
Q  144 accatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaa 209  Q
    ||||||||||| ||| |||||| |||||||||||||||||||| ||| |||||||||||||||||||    
T  24564445 accatttggtgaattgtacgcacccttaccctgttttttacacaagaggttgtttccaagacttgaa 24564379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 27136696 - 27136786
Alignment:
Q  132 ggaaggggtcccaccattt-ggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctt 220  Q
    ||||||||||||||||||| |||||||| |||||| ||||||| |||||||||||| ||| |||||| |||  ||||||||||||| ||||    
T  27136696 ggaaggggtcccaccattttggtgtattgtacgcaaccttaccatgttttttacacaagaggttgttcccagaacttgaactcgtgtcctt 27136786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 222
Target Start/End: Complemental strand, 27474428 - 27474303
Alignment:
Q  98 ccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagt-tgt 195  Q
    ||||||||| ||||||||| |||||  |||||  |||||||||||||||||||  ||||||| |||||||| || |||||||||| |||||  ||  |||    
T  27474428 ccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattcagtgtattgtacgcagctttgccctgttttt-acacaagagactgt 27474330  T
Q  196 ttccaagacttgaactcgtgacctttc 222  Q
    |||||||||||||||  ||||||||||    
T  27474329 ttccaagacttgaacctgtgacctttc 27474303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 31382259 - 31382308
Alignment:
Q  132 ggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttt 181  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  31382259 ggaaggggtcccaccatttggtgtattgtacgcagccttatcctgttttt 31382308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 206
Target Start/End: Complemental strand, 43207634 - 43207533
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccacc-atttggtgtattatacgcagccttaccctgttttttaca-cagaagttgtttccaagac 204  Q
    ||||||| | |||||||||||| ||||||| ||||||||| |||||||||||| || || | |||||||||||||| |||  ||| ||||||||||||||    
T  43207634 aaagctctcgcatacatagggtctgggaagaggtcccaccaatttggtgtattgtatgccgtcttaccctgtttttcacataagaggttgtttccaagac 43207535  T
Q  205 tt 206  Q
    ||    
T  43207534 tt 43207533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 45264419 - 45264536
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccacca-tttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagac 204  Q
    ||||||||| ||||   ||||| || ||||||||||||||| |||||||||||  || ||||||||| ||||||||| ||| ||| |||||||||| |||    
T  45264419 aaagctcccgcatatgcagggtctgagaaggggtcccaccattttggtgtattgcacacagccttactctgttttttgcacaagaggttgtttccaggac 45264518  T
Q  205 ttgaactcgtgacctttc 222  Q
    ||||||  ||||||||||    
T  45264519 ttgaacatgtgacctttc 45264536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 4430080 - 4430160
Alignment:
Q  141 cccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctt 220  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||| |||   ||||| |||||||| ||| |||||||||    
T  4430080 cccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagatactgttttcaagacttaaacccgtgacctt 4430160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 222
Target Start/End: Complemental strand, 22327250 - 22327121
Alignment:
Q  92 ggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt-ggtgtattatacgcagccttaccctgttttttacac-ag 188  Q
    ||||||||||||||| ||||||||| |||||| || ||| |||||     |||||||||| |||| ||  ||| ||||||||||||||||||||||| ||    
T  22327250 ggcagcccggtgcaccaaagctcccgcatacacagagttcgggaac----cccaccattttggtgcatcgtacacagccttaccctgttttttacacaag 22327155  T
Q  189 aagttgtttccaagacttgaactcgtgacctttc 222  Q
    | |||||||||| ||||||||| || ||||||||    
T  22327154 aggttgtttccaggacttgaacccgcgacctttc 22327121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 222
Target Start/End: Complemental strand, 9939613 - 9939483
Alignment:
Q  97 cccggtgcac-aaagctcccacatacatagggtttgggaagggg-tcccaccattt--ggtgtattatacgcagccttaccctgttttttacaca-gaag 191  Q
    |||||||||| ||||||||| |||||  |||||  | ||||||| |||||||||||  ||||||||  ||||| ||||||| ||||| ||| ||| || |    
T  9939613 cccggtgcactaaagctcccgcatacgcagggtccgagaagggggtcccaccatttttggtgtattgcacgcaaccttaccatgtttcttaaacaagagg 9939514  T
Q  192 ttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||| |||||||||||||||||||||    
T  9939513 ttgtttccaggacttgaactcgtgacctttc 9939483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 19974076 - 19974210
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt-ggtgtattatacgcagccttaccctgttttttacaca 187  Q
    |||||||||| |||||| ||||||||| ||||||||| ||  ||||| |||||||| ||||| |||||||| |||||| |||| |||| ||||| ||||     
T  19974076 agggcagccccgtgcactaaagctcccgcatacatagagtccgggaatgggtcccatcattttggtgtattgtacgcaaccttgccctattttt-acact 19974174  T
Q  188 -gaagttgtttccaagacttgaactcgtgacctttc 222  Q
     || | |||||||||||||||||| ||||| |||||    
T  19974175 tgaggctgtttccaagacttgaacccgtgatctttc 19974210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 35117810 - 35117904
Alignment:
Q  131 gggaaggggtcccaccattt--ggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    |||||||||||||| |||||  |||||||| ||| |||||||||||||| |||||||| ||| | | |||||| ||||||||| |||||||||||    
T  35117810 gggaaggggtcccatcatttttggtgtattgtacacagccttaccctgtattttacacaagaggctatttccaggacttgaacccgtgacctttc 35117904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 181
Target Start/End: Original strand, 42304217 - 42304303
Alignment:
Q  98 ccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccacca--tttggtgtattatacgcagccttaccctgttttt 181  Q
    ||||||||| |||||||||||||||  |||||  |||||||||||||||||  ||| ||||||| |||||| |||||||||||||||    
T  42304217 ccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattttttgtgtattgtacgcaaccttaccctgttttt 42304303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 187
Target Start/End: Complemental strand, 8197199 - 8197101
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacaca 187  Q
    |||||| |||||| ||| |||||||| ||||||  |||||  | |||||||||| ||||||||||||| | |||| ||||||||| |||||||||||||    
T  8197199 agggcaacccggtacactaaagctccaacatacgcagggtccgagaaggggtcctaccatttggtgtactgtacgtagccttaccatgttttttacaca 8197101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 17470390 - 17470446
Alignment:
Q  132 ggaaggggtcccaccattt-ggtgtattatacgcagccttaccctgttttttacaca 187  Q
    |||| ||||||||| |||| |||||||| ||||||||||||||||||||||||||||    
T  17470390 ggaacgggtcccactattttggtgtattgtacgcagccttaccctgttttttacaca 17470446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 222
Target Start/End: Complemental strand, 35019383 - 35019252
Alignment:
Q  92 ggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-aga 189  Q
    ||||||||||||||| ||||||| | |||||  ||||| ||||| |||||||||||| |||||||||| || |||||||||  ||| |||||| || |||    
T  35019383 ggcagcccggtgcactaaagctctcgcatacgcagggtctggga-ggggtcccaccaattggtgtattgtatgcagccttatactgatttttatacaaga 35019285  T
Q  190 agttgtttccaagacttgaactcgtgacctttc 222  Q
     ||||||| || ||||||||   ||||||||||    
T  35019284 ggttgtttacaggacttgaatctgtgacctttc 35019252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 222
Target Start/End: Original strand, 22930114 - 22930203
Alignment:
Q  132 ggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaa-gttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||||||||||||||||||||| | | || |||||||||| |||||||||| || | |||||||| ||||||||| | |||||||||    
T  22930114 ggaaggggtcccaccatttggtgtattgt-cacaaccttaccctg-tttttacacaaaaggctgtttccaggacttgaacccatgacctttc 22930203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 222
Target Start/End: Complemental strand, 23371275 - 23371146
Alignment:
Q  93 gcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaa 190  Q
    |||||||||||||| |||||| ||||||||  ||||| ||| ||||||||||| ||||||||||||| ||| || |||| ||| ||||||||| | ||      
T  23371275 gcagcccggtgcactaaagctaccacatacgcagggtctgg-aaggggtcccagcatttggtgtattgtacacaaccttgccc-gttttttacccaagtg 23371178  T
Q  191 gttgtttccaagacttgaactcgtgacctttc 222  Q
    | |||||| | ||||||||| |||||||||||    
T  23371177 gctgtttctaggacttgaacccgtgacctttc 23371146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 50760288 - 50760359
Alignment:
Q  149 ttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacct 219  Q
    |||||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||||||| ||||||||    
T  50760288 ttggtgtattatacgcagccttacccagttttatacacaagaggctgttttcaggacttgaacccgtgacct 50760359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 4249463 - 4249520
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgc 164  Q
    ||||||||| |||||| | |||| |||||||| ||||||||||||||||||| |||||    
T  4249463 aaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgc 4249520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 4249787 - 4249844
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgc 164  Q
    ||||||||| |||||| | |||| |||||||| ||||||||||||||||||| |||||    
T  4249787 aaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgc 4249844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 4250111 - 4250168
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgc 164  Q
    ||||||||| |||||| | |||| |||||||| ||||||||||||||||||| |||||    
T  4250111 aaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgc 4250168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 22325049 - 22324927
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt--ggtgtattatacgcagccttaccctgttttttacac 186  Q
    ||||||||| ||||||| ||||||||| |||||  |||||  |||| ||||  |||||||||  |||||||| || ||||||||||||||| ||||||||    
T  22325049 agggcagcctggtgcactaaagctcccgcatacgcagggtc-gggacggggctccaccatttttggtgtattgtatgcagccttaccctgt-ttttacac 22324952  T
Q  187 -agaagttgtttccaagacttgaac 210  Q
     ||| | ||||||||||||||||||    
T  22324951 aagaggctgtttccaagacttgaac 22324927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 50812096 - 50811961
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt-ggtgtattatacgcagccttaccctgtt-ttttacac 186  Q
    |||||||||| |||||  ||||||||| |||||  ||||   |||||||||||| ||||||| |||||||| |||||| |||||||||||| ||||||||    
T  50812096 agggcagcccagtgcattaaagctcccgcatacgcagggcgcgggaaggggtcc-accattttggtgtattgtacgcaaccttaccctgtttttttacac 50811998  T
Q  187 -agaagttgtttccaagacttgaactcgtgacctttc 222  Q
     ||||| |||||||| ||| |||   |||||||||||    
T  50811997 aagaagctgtttccaggacatgattccgtgacctttc 50811961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 187
Target Start/End: Complemental strand, 19701727 - 19701628
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt-ggtgtattatacgcagccttaccctgttttttacaca 187  Q
    |||| |||| ||||||| ||||||||| |||||  |||||  ||||||||| |||||||||| |||||||| ||| || |||||||  ||||||||||||    
T  19701727 agggtagcctggtgcactaaagctcccgcatacgcagggtccgggaaggggccccaccattttggtgtattgtacccatccttaccaagttttttacaca 19701628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 6358243 - 6358185
Alignment:
Q  124 agggtttgggaaggggtcccacca-tttggtgtattatacgcagccttaccctgttttt 181  Q
    ||||| |||||||||||||||||| |||||||| || |||||||| |||||||| ||||    
T  6358243 agggtctgggaaggggtcccaccattttggtgttttgtacgcagctttaccctgatttt 6358185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 31272429 - 31272510
Alignment:
Q  141 cccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||||| |||  | |||||||||||||| || ||||||||| ||| |||||||||| |||||||||  ||||||||||    
T  31272429 cccaccatttgatgtgctgtacgcagccttaccatg-tttttacacaagaggttgtttccaggacttgaacctgtgacctttc 31272510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 30682957 - 30682900
Alignment:
Q  100 ggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtat 157  Q
    |||||||||||||||| |||||  | |||  ||||||||||||||||||||| |||||    
T  30682957 ggtgcacaaagctcccgcatacgcacggtccgggaaggggtcccaccatttgttgtat 30682900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 34679274 - 34679319
Alignment:
Q  142 ccaccatttggtgtattatacgcagccttaccctgttttttacaca 187  Q
    |||||||||| |||||  ||||||| ||||||||||||||||||||    
T  34679274 ccaccatttgatgtatagtacgcagtcttaccctgttttttacaca 34679319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 222
Target Start/End: Complemental strand, 33223093 - 33223006
Alignment:
Q  136 ggggtcccaccattt-ggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||||||||| |||||||| |||||| |||| ||||| ||||||||| ||| | |||||||| ||||| ||  |||||||||||    
T  33223093 ggggtcccaccattttggtgtattgtacgcaacctttccctg-tttttacacaagaggctgtttccatgacttaaatccgtgacctttc 33223006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 46859173 - 46859129
Alignment:
Q  139 gtcccaccattt-ggtgtattatacgcagccttaccctgtttttt 182  Q
    |||||||||||| |||||||| ||||||| |||||||||||||||    
T  46859173 gtcccaccattttggtgtattgtacgcagtcttaccctgtttttt 46859129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 3e-32; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 98 - 222
Target Start/End: Complemental strand, 19027973 - 19027847
Alignment:
Q  98 ccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgt 195  Q
    ||||||||| |||||||||||||||  || || ||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||| |||||    
T  19027973 ccggtgcactaaagctcccacatacgcagagtctggaaaggggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacaagatgttgt 19027874  T
Q  196 ttccaagacttgaactcgtgacctttc 222  Q
    ||||| ||||||||| |||||||||||    
T  19027873 ttccaggacttgaacccgtgacctttc 19027847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 35567303 - 35567169
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-a 187  Q
    ||||||||||||||||| ||||||||| || ||  |||||| ||||||||||||||||||||||||| || ||| ||||||||||||||||||||||| |    
T  35567303 agggcagcccggtgcactaaagctcccgcagacgcagggttcgggaaggggtcccaccatttggtgtgttgtacacagccttaccctgttttttacacaa 35567204  T
Q  188 gaagttgtttccaagacttgaactcgtgacctttc 222  Q
    |  | |||||||||||||||||| | |||||||||    
T  35567203 gtggctgtttccaagacttgaacccatgacctttc 35567169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 91 - 222
Target Start/End: Original strand, 17043398 - 17043530
Alignment:
Q  91 gggcagcccggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-aga 189  Q
    |||||||| |||||| ||||||||  ||||   ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||    
T  17043398 gggcagcctggtgcataaagctccagcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtattttacacaaga 17043497  T
Q  190 agttgtttccaagacttgaactcgtgacctttc 222  Q
     | |||||||| |||||||||  ||||||||||    
T  17043498 ggctgtttccaggacttgaacctgtgacctttc 17043530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 25463254 - 25463121
Alignment:
Q  90 agggcagcccggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-ag 188  Q
    |||| |||| |||||||||||||||| ||||   |||||  ||||||||||||||||||||||||| || |||||| |||| ||| ||||||||||| ||    
T  25463254 agggtagcctggtgcacaaagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtgttgtacgcaacctttcccagttttttacacaag 25463155  T
Q  189 aagttgtttccaagacttgaactcgtgacctttc 222  Q
    | |||||||||| ||||||||| |||||||||||    
T  25463154 aggttgtttccaggacttgaacccgtgacctttc 25463121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 47444048 - 47443956
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||| | |||||||| ||||||||| |||||||||||    
T  47444048 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacgcaagaggctgtttccaggacttgaacccgtgacctttc 47443956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 91 - 222
Target Start/End: Complemental strand, 54967151 - 54967020
Alignment:
Q  91 gggcagcccggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-aga 189  Q
    ||||||||||||||||||||||||| ||||  ||||||  ||||||||||||||||||||||| |||| || ||| |||||||||||||||||||| |||    
T  54967151 gggcagcccggtgcacaaagctcccgcatatgtagggtacgggaaggggtcccaccatttggtatattgta-gcaaccttaccctgttttttacacaaga 54967053  T
Q  190 agttgtttccaagacttgaactcgtgacctttc 222  Q
     ||| ||||||  ||||||||  ||||||||||    
T  54967052 ggttctttccagaacttgaacatgtgacctttc 54967020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 6430628 - 6430761
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-a 187  Q
    |||||| |||||||| | ||||||||| |||||  |||||  |||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||| |    
T  6430628 agggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaagtggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaa 6430726  T
Q  188 gaagttgtttccaagacttgaactcgtgacctttc 222  Q
    || | |||||||| ||||||||| |||||||||||    
T  6430727 gaggctgtttccatgacttgaacccgtgacctttc 6430761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 220
Target Start/End: Complemental strand, 5648372 - 5648260
Alignment:
Q  108 aagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagactt 206  Q
    |||||||| |||||  |||||  |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||| | |||||||| |||||    
T  5648372 aagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggactt 5648274  T
Q  207 gaactcgtgacctt 220  Q
    |||| |||||||||    
T  5648273 gaacccgtgacctt 5648260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 20225115 - 20224983
Alignment:
Q  90 agggcagcccggtgcacaa-agctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacag 188  Q
    |||||| |||||||||| | ||||||| ||||   |||||  |||||||||||||||||||||||||||| |||||||||||||||||||||  ||| ||    
T  20225115 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacaca-ag 20225017  T
Q  189 aagttgtttccaagacttgaactcgtgacctttc 222  Q
    | |||||||||| ||||||||| | |||||||||    
T  20225016 aggttgtttccaggacttgaacccatgacctttc 20224983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 47528532 - 47528664
Alignment:
Q  90 agggcagcccggtgcacaa-agctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacag 188  Q
    |||||| |||||||||| | ||||||||||||   |||||  |||||||||||||||||||||||||||| |||||||||||||||||||||  ||| ||    
T  47528532 agggcaacccggtgcactagagctcccacatattcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacaca-ag 47528630  T
Q  189 aagttgtttccaagacttgaactcgtgacctttc 222  Q
    | | |||||||| |||||||||  ||||||||||    
T  47528631 aggctgtttccaggacttgaacctgtgacctttc 47528664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 90 - 187
Target Start/End: Original strand, 20639660 - 20639759
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt-ggtgtattatacgcagccttaccctgttttttacaca 187  Q
    |||||| |||||||||| ||||||||| |||||  |||||  |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  20639660 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttttacaca 20639759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 48598869 - 48598959
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagttgtttccaagacttgaactcgtgacctttc 222  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||  ||| ||| | |||||||| ||||||||| |||||||||||    
T  48598869 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacaca-agaggctgtttccaggacttgaacccgtgacctttc 48598959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 187
Target Start/End: Complemental strand, 25629182 - 25629084
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacaca 187  Q
    |||||| |||||||||| ||||||||| ||||  ||||||  |||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||    
T  25629182 agggcaacccggtgcactaaagctcccgcatatgtagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctattttttacaca 25629084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 44363132 - 44363268
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccacca--tttggtgtattatacgcagccttaccctgttttttacac 186  Q
    |||||| |||||||||| ||||||||| |||||  |||||  |||||||||||||||||  |||||||  || ||||||||| |||||||||||||||||    
T  44363132 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgcgttgtacgcagccctaccctgttttttacac 44363231  T
Q  187 a-gaagttgtttccaagacttgaactcgtgacctttc 222  Q
    | || | ||||| || |||||||||||||||||||||    
T  44363232 acgaggctgttttcaggacttgaactcgtgacctttc 44363268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 9832357 - 9832447
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagttgtttccaagacttgaactcgtgacctttc 222  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||  ||| ||| | ||||| || ||||||||| |||||||||||    
T  9832357 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacaca-agaggctgttttcaggacttgaacccgtgacctttc 9832447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 30639512 - 30639379
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacag 188  Q
    |||||| ||| |||||| ||||||||| ||||   |||||  ||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||     
T  30639512 agggcaacccagtgcactaaagctcccgcatatgcagggtccgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgt-ttttacacaa 30639414  T
Q  189 aagt-tgtttccaagacttgaactcgtgacctttc 222  Q
     ||| |||||||| |||||||||  ||||||||||    
T  30639413 gagtctgtttccaggacttgaaccagtgacctttc 30639379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 90 - 183
Target Start/End: Original strand, 30690178 - 30690272
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttttta 183  Q
    ||||||||| ||||||| ||||||||| |||||  |||||  ||||||||||||||||| |||||||||| || |||||||||||||||||||||    
T  30690178 agggcagcctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccaattggtgtattgtatgcagccttaccctgtttttta 30690272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 90 - 187
Target Start/End: Original strand, 51865040 - 51865138
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacaca 187  Q
    ||||||| ||||||||  ||||||||| |||||  |||||  ||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  51865040 agggcagtccggtgcaataaagctcccgcatacgcagggtccgggaaggggccccaccatttggtgtattgtacgcagccttaccatgttttttacaca 51865138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 114 - 222
Target Start/End: Original strand, 5306691 - 5306799
Alignment:
Q  114 ccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactc 212  Q
    ||||||||  |||||  |||||||||||||||||||||||||||| |||||| ||||||||||  |||||||| ||| | |||||||| ||||||||| |    
T  5306691 ccacatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg-attttacacaagaggctgtttccaggacttgaaccc 5306789  T
Q  213 gtgacctttc 222  Q
    ||||||||||    
T  5306790 gtgacctttc 5306799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 29207900 - 29208032
Alignment:
Q  90 agggcagcccggtgcacaa-agctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacag 188  Q
    |||||| |||||||||| | ||||||| ||||   |||||  |||||||||||||||||||||||||||| |||||||||||||||||||||  ||| ||    
T  29207900 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacaca-ag 29207998  T
Q  189 aagttgtttccaagacttgaactcgtgacctttc 222  Q
    | |   |||||| ||||||||| |||||||||||    
T  29207999 aggcaatttccaggacttgaacccgtgacctttc 29208032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 134 - 222
Target Start/End: Complemental strand, 37494939 - 37494850
Alignment:
Q  134 aaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    |||||||||||||||||||| |||| || ||| |||||||||||||||||||| ||| |||||||||| |||||||||  ||||||||||    
T  37494939 aaggggtcccaccatttggtatattgtatgcaaccttaccctgttttttacacaagaggttgtttccaggacttgaacctgtgacctttc 37494850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 108 - 220
Target Start/End: Complemental strand, 40915942 - 40915830
Alignment:
Q  108 aagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagactt 206  Q
    |||||||| |||||  |||||  |||||||| ||||||||||||||||||| |||||||||||||| || ||||||||| ||| | |||||||| |||||    
T  40915942 aagctcccgcatacgcagggtccgggaagggctcccaccatttggtgtattgtacgcagccttaccttg-tttttacacaagaggctgtttccaggactt 40915844  T
Q  207 gaactcgtgacctt 220  Q
    |||| |||||||||    
T  40915843 gaacccgtgacctt 40915830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 49796911 - 49796839
Alignment:
Q  108 aagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttt 180  Q
    |||||||| |||||  |||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  49796911 aagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccatgtttt 49796839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 90 - 220
Target Start/End: Original strand, 16408603 - 16408737
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac 186  Q
    |||||| |||||||||| ||||||||| ||||    ||||  |||||||||| ||||||||  ||||||||| ||||||| |||||||||||||||||||    
T  16408603 agggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgttttttacac 16408702  T
Q  187 -agaagttgtttccaagacttgaactcgtgacctt 220  Q
     ||| | |||||||| ||||||||| |||||||||    
T  16408703 aagaggctgtttccaggacttgaacccgtgacctt 16408737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 219
Target Start/End: Original strand, 32478801 - 32478918
Alignment:
Q  97 cccggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgt 195  Q
    ||||||||||||||||||| |||||   ||||  ||||||||||||||||||||||||||||     ||||||||||||| ||||||||| ||| |||||    
T  32478801 cccggtgcacaaagctcccgcatacgctgggtccgggaaggggtcccaccatttggtgtatt-----cagccttaccctg-tttttacactagaggttgt 32478894  T
Q  196 ttccaagacttgaactcgtgacct 219  Q
    ||||| |||||||||  |||||||    
T  32478895 ttccaggacttgaacctgtgacct 32478918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 9987879 - 9987957
Alignment:
Q  132 ggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaa 209  Q
    ||||||||||||||||||||||||||| || ||||||||||||| || ||||||| ||| |||||||||| ||||||||    
T  9987879 ggaaggggtcccaccatttggtgtattgtatgcagccttaccctattgtttacacaagaggttgtttccaggacttgaa 9987957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 220
Target Start/End: Complemental strand, 14983949 - 14983835
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagact 205  Q
    ||||||||| |||||  |||||  |||||||||||||||||||| ||||||| || ||| ||||||||| |||||||||| ||| | |||||| ||||||    
T  14983949 aaagctcccgcatacgcagggtccgggaaggggtcccaccatttagtgtattgtaggcaaccttaccctattttttacacaagaggctgtttcaaagact 14983850  T
Q  206 tgaactcgtgacctt 220  Q
    ||||  |||||||||    
T  14983849 tgaatccgtgacctt 14983835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 21647098 - 21646965
Alignment:
Q  91 gggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac- 186  Q
    ||||| |||||||||| ||||||||| ||||    |||| ||||||||||||||||||||  |||| |||| |||||||||||||||| ||||||||||     
T  21647098 gggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtatattgtacgcagccttaccctattttttacaca 21646999  T
Q  187 agaagttgtttccaagacttgaactcgtgacctt 220  Q
    ||| | |||||||| |||||||||  ||||||||    
T  21646998 agaggctgtttccaggacttgaacctgtgacctt 21646965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 91 - 210
Target Start/End: Complemental strand, 36589876 - 36589754
Alignment:
Q  91 gggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccacca-tttggtgtattatacgcagccttaccctgttttttacac-a 187  Q
    |||||||||||||||| ||||||||| |||||||||||||  |||||||||||||||| ||||||||| | |   |||| ||||| |||||||||||| |    
T  36589876 gggcagcccggtgcaccaaagctcccgcatacatagggttcaggaaggggtcccaccattttggtgtactgtcaacagcattaccatgttttttacacaa 36589777  T
Q  188 gaagttgtttccaagacttgaac 210  Q
    || | |||||||| |||||||||    
T  36589776 gaggctgtttccaggacttgaac 36589754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 222
Target Start/End: Original strand, 7385499 - 7385612
Alignment:
Q  110 gctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacaca-gaagttgtttccaagacttga 208  Q
    |||||| |||||| |||||  ||||| ||||||||||||||||||||||  || || ||||||||| ||||||||||| || | |||||||| | |||||    
T  7385499 gctcccgcatacacagggtccgggaaagggtcccaccatttggtgtattgcacacaaccttaccctattttttacacatgaggctgtttccagggcttga 7385598  T
Q  209 actcgtgacctttc 222  Q
    || |||||||||||    
T  7385599 acccgtgacctttc 7385612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 7909318 - 7909375
Alignment:
Q  124 agggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttt 181  Q
    |||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  7909318 agggttcgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttt 7909375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 187
Target Start/End: Complemental strand, 23501922 - 23501822
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac 186  Q
    |||||| |||||||||| ||||||||| ||||   |||||  |||||||||||||||||||  ||||||||| |||||| ||||||||||||||||||||    
T  23501922 agggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccctgttttttacac 23501823  T
Q  187 a 187  Q
    |    
T  23501822 a 23501822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 222
Target Start/End: Original strand, 41018837 - 41018929
Alignment:
Q  130 tgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    |||||||||||||||| |||||||||||| |||| |||||||||||   |||||||| ||| |||||||||| ||||||||| |||||||||||    
T  41018837 tgggaaggggtcccactatttggtgtattgtacgtagccttaccct-aattttacacaagaggttgtttccaggacttgaacccgtgacctttc 41018929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 222
Target Start/End: Original strand, 3580845 - 3580972
Alignment:
Q  92 ggcagcccggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaag 191  Q
    ||||| || ||||||||||||||||||||   |||||  |||||||||||| | |||||||||||||  || |||||||||| || |||||||||  |||    
T  3580845 ggcagtcccgtgcacaaagctcccacatatgcagggtccgggaaggggtcctagcatttggtgtattgcacacagccttaccatggtttttacac--aag 3580942  T
Q  192 ttgtttccaagacttgaactcgtgacctttc 222  Q
      |||||| ||||||||||||||||| ||||    
T  3580943 aggtttcc-agacttgaactcgtgacttttc 3580972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 183
Target Start/End: Original strand, 20908638 - 20908733
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccacca-tttggtgtattatacgcagccttaccctgtttttta 183  Q
    |||||||||  |||||| ||||||||| |||||  |||||| ||||||||||||||||| ||||||||||| |||||||||||||| | |||||||    
T  20908638 agggcagccttgtgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgcagccttaccttctttttta 20908733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 16911655 - 16911562
Alignment:
Q  131 gggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgaccttt 221  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||||| ||| ||||| ||| | |||||| | ||||||||| ||||||||||    
T  16911655 gggaaggggtcccaccattattggtgtattgtacgcagccttaccctgatttgtacacaagaggctgtttctaggacttgaacccgtgaccttt 16911562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 54175198 - 54175104
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggt-ttgggaaggggtcccacca-tttggtgtattatacgcagccttaccctgttttt 181  Q
    ||||||||||||||||| ||||||||| ||||   |||||   ||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  54175198 agggcagcccggtgcactaaagctcccgcatatgcagggtccggggaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttt 54175104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 13256437 - 13256501
Alignment:
Q  125 gggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacaca 187  Q
    ||||| ||||||||||||||| |||  ||||||||| ||||||||||||||||||||||||||||    
T  13256437 gggttcgggaaggggtcccactattattggtgtattgtacgcagccttaccctgttttttacaca 13256501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 30581509 - 30581602
Alignment:
Q  131 gggaaggggtcccaccattt-ggtgtattatacgcagccttaccctg-ttttttacac-agaagttgtttccaagacttgaactcgtgaccttt 221  Q
    |||||||||||||||||||| |||||||| ||| || |||||||||| |||||||||| ||| |||||||||| ||||||||| | ||||||||    
T  30581509 gggaaggggtcccaccattttggtgtattgtacacacccttaccctgtttttttacacaagaggttgtttccacgacttgaacccttgaccttt 30581602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 222
Target Start/End: Original strand, 487187 - 487271
Alignment:
Q  140 tcccaccatttg-gtgtattatacgcagccttaccctgttttttacaca-gaagttgtttccaagacttgaactcgtgacctttc 222  Q
    |||||||||||  ||||||| |||||||| ||||| |||||| |||||| || |||||||||||||||||||| |||||||||||    
T  487187 tcccaccattttagtgtattgtacgcagctttaccttgttttatacacaagaggttgtttccaagacttgaacccgtgacctttc 487271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 209
Target Start/End: Complemental strand, 21489203 - 21489099
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccacca-tttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagac 204  Q
    ||||||||| |||||  |||||| ||||||||||||||||| ||||||| ||| ||||||| ||||| ||||||||||| | ||| | |||||||| |||    
T  21489203 aaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgcattgtacgcagtcttactctgttttttacgcaagaggctgtttccaggac 21489104  T
Q  205 ttgaa 209  Q
    |||||    
T  21489103 ttgaa 21489099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 8473666 - 8473713
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgtt 178  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||    
T  8473666 gggaaggggtcccaccatttggtgtattgtatgcagccttaccctgtt 8473713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 210
Target Start/End: Original strand, 17079696 - 17079775
Alignment:
Q  132 ggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaac 210  Q
    |||| |||||||||||||| | ||||| || |||||||||||||||||| ||||| |||  |||||||||||||||||||    
T  17079696 ggaaagggtcccaccatttagcgtattgtatgcagccttaccctgttttatacacaagatattgtttccaagacttgaac 17079775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 47441574 - 47441628
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttaca 185  Q
    |||||||||||| ||||||||||||||| ||| ||||||||||||| ||||||||    
T  47441574 gggaaggggtccaaccatttggtgtattgtacacagccttaccctgatttttaca 47441628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 11054150 - 11054282
Alignment:
Q  90 agggcagcccggtgcacaa-agctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacag 188  Q
    |||||| |||||||||| | ||||||| ||||   |||||  |||||||||| || |||||||||||||| ||||||| |||||||||||||  ||| ||    
T  11054150 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccgccatttggtgtattgtacgcagtcttaccctgttttacaca-ag 11054248  T
Q  189 aagttgtttccaagacttgaactcgtgacctttc 222  Q
    |   ||||| || ||||||||| |||||||||||    
T  11054249 agactgttttcaggacttgaacccgtgacctttc 11054282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 42164224 - 42164284
Alignment:
Q  162 cgcagccttaccctgttttttacaca-gaagttgtttccaagacttgaactcgtgacctttc 222  Q
    |||||||||||||||||||| ||||| || |||||||||||||||||||| |||||||||||    
T  42164224 cgcagccttaccctgttttt-acacaagaggttgtttccaagacttgaacccgtgacctttc 42164284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 187
Target Start/End: Complemental strand, 25343321 - 25343222
Alignment:
Q  91 gggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt--ggtgtattatacgcagccttaccctgttttttacaca 187  Q
    |||||||| ||||| | ||||||| |||||||  ||| | | ||||||||||| ||| |||  |||||||| ||||||||||||||||||||||||||||    
T  25343321 gggcagccgggtgctctaaagctctcacatacgcaggatctaggaaggggtccaaccctttttggtgtattgtacgcagccttaccctgttttttacaca 25343222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 221
Target Start/End: Complemental strand, 54730376 - 54730249
Alignment:
Q  99 cggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccct-gttttttacac-agaagtt 193  Q
    |||||||| ||||||||| |||||  |||||  |||||||||| ||| ||||  |||||||||||||||||||||| |||  |||||||||| ||| | |    
T  54730376 cggtgcactaaagctcccgcatacgcagggtccgggaaggggttccatcattattggtgtattatacgcagccttatcctatttttttacacaagaggct 54730277  T
Q  194 gtttccaagacttgaactcgtgaccttt 221  Q
    ||||| | ||||||||| ||||||||||    
T  54730276 gtttctaggacttgaacccgtgaccttt 54730249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 20225209 - 20225119
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgt 177  Q
    |||||| |||||||||| ||||||||| ||||    ||||  |||||||||||||||||||  ||||||||| ||||||||||||||||||    
T  20225209 agggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgt 20225119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 222
Target Start/End: Original strand, 39077852 - 39077930
Alignment:
Q  143 caccatttggtgtattatacgcagccttaccctgttttttacacagaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||||| |||| |||||| ||||||||||||||  ||| ||| | |||||||| ||||||||| |||||||||||    
T  39077852 caccatttggtatattgtacgcaaccttaccctgttttacaca-agaggctgtttccaggacttgaacccgtgacctttc 39077930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 39029111 - 39029185
Alignment:
Q  138 ggtcccaccatttg-gtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaac 210  Q
    |||||||||||||  ||||||| ||| ||||||||||||||||||||||| ||| | |||||||||| |||||||    
T  39029111 ggtcccaccattttcgtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaaggcttgaac 39029185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 10277794 - 10277855
Alignment:
Q  124 agggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttaca 185  Q
    ||||| |||||||||||  |||||||||||||||| |||||||||||| ||| |||| ||||    
T  10277794 agggtctgggaaggggtttcaccatttggtgtattgtacgcagccttatcctattttataca 10277855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 12711495 - 12711544
Alignment:
Q  133 gaaggggtcccaccatttggtgtattatacgcagccttaccctgtttttt 182  Q
    ||||||||||| |||||||||||||| ||||||| |||||||| ||||||    
T  12711495 gaaggggtcccgccatttggtgtattgtacgcagtcttaccctatttttt 12711544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 35894505 - 35894562
Alignment:
Q  131 gggaaggggtcccaccattt-ggtgtattatacgcagccttaccctgttttttacaca 187  Q
    |||||||||||||||||||| |||||||| ||||||  |||||| |||||||||||||    
T  35894505 gggaaggggtcccaccattttggtgtattgtacgcacacttaccgtgttttttacaca 35894562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 48327801 - 48327865
Alignment:
Q  125 gggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacaca 187  Q
    ||||| |||||| ||||||||||||  ||||||||| || |||| ||||||||||||||||||||    
T  48327801 gggttcgggaagaggtcccaccattattggtgtattgtatgcagtcttaccctgttttttacaca 48327865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 14590922 - 14590878
Alignment:
Q  138 ggtcccaccatttggtgtattatacgcagccttaccctgtttttt 182  Q
    |||||||||||||| |||||| || ||||||||||||||||||||    
T  14590922 ggtcccaccatttgatgtattgtatgcagccttaccctgtttttt 14590878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 180
Target Start/End: Complemental strand, 16494334 - 16494259
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccacca--tttggtgtattatacgcagccttaccctgtttt 180  Q
    |||||| || |||||| ||||| |||||| |||||||||||  ||||||||||| || ||||| ||||||||||||    
T  16494334 aaagcttccgcatacacagggtctgggaaagggtcccaccatttttggtgtattgtatgcagctttaccctgtttt 16494259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 51420646 - 51420586
Alignment:
Q  150 tggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaa 209  Q
    ||||||||| ||| ||||||||||||||||| ||||| ||| |||||||||| ||||||||    
T  51420646 tggtgtattgtacccagccttaccctgttttctacacaagaggttgtttccatgacttgaa 51420586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 4222072 - 4222123
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttttt 182  Q
    ||||||||||||||||| || ||||||| |||||||||||||  ||||||||    
T  4222072 gggaaggggtcccaccaatttgtgtattctacgcagccttactttgtttttt 4222123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 21003468 - 21003410
Alignment:
Q  90 agggcagcccggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccat 148  Q
    |||||||||||||||||||||||||| || ||  ||||| ||||||| |||| ||||||    
T  21003468 agggcagcccggtgcacaaagctcccgcacacgcagggtctgggaagaggtcacaccat 21003410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 38786742 - 38786672
Alignment:
Q  90 agggcagcccggtgcacaa-agctcccacatacatagggtttgggaaggggtcccaccatttggtgtatta 159  Q
    |||||| |||||||||| | ||||||| ||||   |||||  |||||||||||||||||||||||||||||    
T  38786742 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatta 38786672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 55766468 - 55766558
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttt 179  Q
    |||||| |||||||||| ||||||| | |||||  | |||  |||| ||||| ||||||||  ||||||| ||||||||||||||||||||    
T  55766468 agggcatcccggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattcagtgtattgtacgcagccttaccctgttt 55766558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 36816386 - 36816479
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt-ggtgtattatacgcagccttaccctgttttt 181  Q
    |||||| |||||| ||| ||||||||| |||||| |||||   |||||| |||||||| ||| |||||||| ||||||||| | ||||||||||    
T  36816386 agggcaacccggtacactaaagctcccgcatacacagggtccaggaaggagtcccacctttttggtgtattgtacgcagccctgccctgttttt 36816479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 222
Target Start/End: Complemental strand, 44357320 - 44357219
Alignment:
Q  123 tagggtttgggaaggggtcccaccattt-ggtgtattatacgcagccttaccctgttttttacacagaag-ttgtttccaagacttgaactcgtgacctt 220  Q
    |||||| ||||||| |||||| |||||| |||||||| ||||  | ||||| || ||| ||||||| ||| ||||||| | ||||||||||| |||||||    
T  44357320 tagggtctgggaagaggtcccgccattttggtgtattgtacgtcgtcttactctatttattacacaaaaggttgtttctaggacttgaactcatgacctt 44357221  T
Q  221 tc 222  Q
    ||    
T  44357220 tc 44357219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 38755910 - 38755970
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatt 149  Q
    |||||| |||||||||| ||||||||| |||||  |||||  |||||||||||||||||||    
T  38755910 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 38755970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 43035307 - 43035247
Alignment:
Q  163 gcagccttaccctgttttttacaca-gaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||||| ||||| ||||||| || |||||||||  ||||||||| |||||||||||    
T  43035307 gcagccttaccgtgtttcttacacaagaggttgtttcctggacttgaacccgtgacctttc 43035247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 12221916 - 12222053
Alignment:
Q  90 agggcagcccggtgcac--aaagctcccacatacatagggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttaca 185  Q
    |||||| ||||||||||  ||||||||| |||||  |||||  |||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||    
T  12221916 agggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttaca 12222015  T
Q  186 c-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    | ||| | |||||||||||||||||| |||||||||||    
T  12222016 caagaggctgtttccaagacttgaacccgtgacctttc 12222053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 29355857 - 29355993
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac 186  Q
    |||||| |||||||||| ||||||||| |||||  |||||  |||||||||||||||||||  ||||||||| |||||||||||||||||||| ||||||    
T  29355857 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttacac 29355956  T
Q  187 -agaagttgtttccaagacttgaactcgtgacctttc 222  Q
     ||| | |||||||| ||||||||| |||||||||||    
T  29355957 aagaggctgtttccaggacttgaacccgtgacctttc 29355993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 2166412 - 2166548
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac 186  Q
    |||||| |||||||||| |||||||||  ||| |||||||  |||||||||||||||||||  ||||||||| |||||| ||||| ||||| ||||||||    
T  2166412 agggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttacac 2166511  T
Q  187 a-gaagttgtttccaagacttgaactcgtgacctttc 222  Q
    | || |||||||||| ||||||||| |||||||||||    
T  2166512 aagaggttgtttccaggacttgaacccgtgacctttc 2166548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 2178045 - 2178181
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac 186  Q
    |||||| |||||||||| |||||||||  ||| |||||||  |||||||||||||||||||  ||||||||| |||||| ||||| ||||| ||||||||    
T  2178045 agggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttacac 2178144  T
Q  187 a-gaagttgtttccaagacttgaactcgtgacctttc 222  Q
    | || |||||||||| ||||||||| |||||||||||    
T  2178145 aagaggttgtttccaggacttgaacccgtgacctttc 2178181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 1347095 - 1346963
Alignment:
Q  90 agggcagcccggtgcacaa-agctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacag 188  Q
    |||||| |||||||||| | ||||||| ||||   |||||  |||||||||||||||||||||||||||| |||||||||||||||||||||  ||| ||    
T  1347095 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacaca-ag 1346997  T
Q  189 aagttgtttccaagacttgaactcgtgacctttc 222  Q
      | |||||||| ||||||||| |||||||||||    
T  1346996 tggctgtttccaggacttgaacccgtgacctttc 1346963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 1354759 - 1354891
Alignment:
Q  90 agggcagcccggtgcacaa-agctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacag 188  Q
    |||||| |||||||||| | ||||||| ||||   |||||  |||||||||||||||||||||||||||| |||||||||||||||||||||  ||| ||    
T  1354759 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacaca-ag 1354857  T
Q  189 aagttgtttccaagacttgaactcgtgacctttc 222  Q
    | | |||||||| |||||||||  ||||||||||    
T  1354858 aggctgtttccaggacttgaaccagtgacctttc 1354891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 222
Target Start/End: Original strand, 13904984 - 13905115
Alignment:
Q  91 gggcagcccggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-aga 189  Q
    ||||||||||||||||||||||||   ||||  |||||| ||||| |||||| ||||||||||| ||| || |||||||||||||||||||||||| |||    
T  13904984 gggcagcccggtgcacaaagctccgtgatacgcagggttcgggaaagggtcc-accatttggtgaattgtatgcagccttaccctgttttttacacaaga 13905082  T
Q  190 agttgtttccaagacttgaactcgtgacctttc 222  Q
     || |||| || ||||||| | |||||||||||    
T  13905083 ggtcgttttcaggacttgagcccgtgacctttc 13905115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 97 - 222
Target Start/End: Original strand, 3815086 - 3815213
Alignment:
Q  97 cccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagt-tg 194  Q
    |||||||||| |||||| || ||||| ||||||| ||||| |||||||||||||||||||||| ||||||| | |||| | |||||||||||  ||| ||    
T  3815086 cccggtgcactaaagcttccgcatacgtagggttcgggaaagggtcccaccatttggtgtattgtacgcagtcgtaccatattttttacacaatagtctg 3815185  T
Q  195 tttccaagacttgaactcgtgacctttc 222  Q
    |||||| ||||||||| |||||| ||||    
T  3815186 tttccaggacttgaacccgtgacatttc 3815213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 7947373 - 7947508
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt-ggtgtattatacgcagccttaccctgttttttacaca 187  Q
    |||||||||  |||||| |||||||||||||||  | |||  ||||||||| |||||||||| |||||||| ||||||||||||||||| ||||||||||    
T  7947373 agggcagccaagtgcactaaagctcccacatacgcaaggtccgggaagggggcccaccattttggtgtattgtacgcagccttaccctggtttttacaca 7947472  T
Q  188 -gaagttgtttccaagacttgaactcgtgacctttc 222  Q
     || |||||||||| || ||||||  ||||||||||    
T  7947473 ggaggttgtttccaggagttgaaccggtgacctttc 7947508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 14553626 - 14553511
Alignment:
Q  109 agctcccacatacatagggtttgggaaggggtcccacca--tttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagact 205  Q
    ||||||| |||||| ||||| |  |||||||||||||||  ||||||||||||||| |||||||||||| |||||||||| ||||| | |||||| ||||    
T  14553626 agctcccgcatacacagggtctacgaaggggtcccaccagttttggtgtattatacacagccttaccctattttttacacaagaagctatttccaggact 14553527  T
Q  206 tgaactcgtgaccttt 221  Q
    |||||  |||||||||    
T  14553526 tgaacctgtgaccttt 14553511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 107 - 221
Target Start/End: Original strand, 18277213 - 18277328
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagact 205  Q
    ||||||||| ||||| ||| || | ||||||||||||||||||||||||  | ||| || |||||||||| ||||||||| ||| | ||||||||||| |    
T  18277213 aaagctcccgcatacgtagagtctaggaaggggtcccaccatttggtgttctgtactcaaccttaccctgatttttacacaagaggctgtttccaagatt 18277312  T
Q  206 tgaactcgtgaccttt 221  Q
    ||||| ||||||||||    
T  18277313 tgaacccgtgaccttt 18277328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 216
Target Start/End: Complemental strand, 33138918 - 33138838
Alignment:
Q  137 gggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtga 216  Q
    |||||||||||||||||||||| ||||| ||||||| |||||||||| || ||| |||||||||| ||||||||| |||||    
T  33138918 gggtcccaccatttggtgtattgtacgcggccttactctgttttttatacaagaggttgtttccaggacttgaacccgtga 33138838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 1941941 - 1941890
Alignment:
Q  136 ggggtcccaccatttggtgtattatacgcagccttaccctgttttttacaca 187  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  1941941 ggggtcccaccattcggtgtattgtacgcagccttaccctgttttttacaca 1941890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 12889560 - 12889425
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt-ggtgtattatacgcagccttaccctgttttttacaca 187  Q
    ||||||||||| ||||| |||||||||||| ||| |||||  || ||||||||||| | ||| |||||||| || |||||||| |||||||||| |||||    
T  12889560 agggcagcccgatgcactaaagctcccacacacagagggtccggaaaggggtcccatcgtttaggtgtattgtatgcagccttgccctgtttttaacaca 12889461  T
Q  188 -gaagttgtttccaagacttgaactcgtgacctttc 222  Q
     || | ||||| ||||||||||||  ||||||||||    
T  12889460 agaggctgttttcaagacttgaacctgtgacctttc 12889425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 221
Target Start/End: Complemental strand, 28007722 - 28007628
Alignment:
Q  126 ggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagttgtttccaagacttgaactcgtgaccttt 221  Q
    |||| |||||||||||||| ||||||||||||| |||||||||| ||||||||||  ||| ||| | | |||||| ||||||||| ||||||||||    
T  28007722 ggttagggaaggggtcccagcatttggtgtattgtacgcagcctgaccctgttttacaca-agaggctctttccaggacttgaacccgtgaccttt 28007628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 17448386 - 17448323
Alignment:
Q  160 tacgcagccttaccctgttttttacacagaa-gttgtttccaagacttgaactcgtgacctttc 222  Q
    |||||||||||||||||||||||||||| || ||||||| ||| |||||||| |||||||||||    
T  17448386 tacgcagccttaccctgttttttacacaaaatgttgttttcaaaacttgaacccgtgacctttc 17448323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 26097291 - 26097200
Alignment:
Q  90 agggcagcccggtgcacaa-agctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttt 180  Q
    |||||| |||||||||| | ||||||| ||||   |||||  |||||||||||||  ||||||||||||| |||||||||||||||||||||    
T  26097291 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccttcatttggtgtattgtacgcagccttaccctgtttt 26097200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 15866083 - 15866134
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttac 184  Q
    |||||||||||||||||||||||||||  |||||||| ||||||||||||||||    
T  15866083 gggaaggggtcccaccatttggtgtat--tacgcagctttaccctgttttttac 15866134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 12886046 - 12885985
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt 150  Q
    |||||| |||||||||| |||||||||||||||  ||||| |||||||||||||||||||||    
T  12886046 agggcaacccggtgcactaaagctcccacatacgcagggtctgggaaggggtcccaccattt 12885985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 18254651 - 18254559
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttt 181  Q
    ||||||||||||||||| ||| |||||| |||| ||| || || ||||||||||||| |||| | ||||| || ||||| |||||||||||||    
T  18254651 agggcagcccggtgcaccaaaactcccatatacgtagagtctgtgaaggggtcccactattttgggtattgtatgcagctttaccctgttttt 18254559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 210
Target Start/End: Complemental strand, 32579540 - 32579437
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttt-tacacagaagttgtttccaagact 205  Q
    ||||||||| ||||   ||||| ||||||||||||||||||||||| ||||| ||||||| |||||| | ||||| ||| |||| | |||||||| ||||    
T  32579540 aaagctcccgcatatgcagggtctgggaaggggtcccaccatttggggtattgtacgcaggcttaccgtatttttatac-cagaggctgtttccaggact 32579442  T
Q  206 tgaac 210  Q
    |||||    
T  32579441 tgaac 32579437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 15865902 - 15865950
Alignment:
Q  132 ggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttttt 182  Q
    ||||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  15865902 ggaaggggtcccaccatttggtgtat--tacgcagctttaccctgtttttt 15865950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 25557856 - 25557765
Alignment:
Q  90 agggcagcccggtgcacaa-agctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttt 180  Q
    |||||| |||||||||| | ||||||| ||||   |||||  |||||||||| ||  ||||||||||||| |||||||||||||||||||||    
T  25557856 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccttcatttggtgtattgtacgcagccttaccctgtttt 25557765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 222
Target Start/End: Complemental strand, 20400772 - 20400666
Alignment:
Q  117 catacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtg 215  Q
    ||||| ||||||| || || ||||||| | |||| ||||| | ||||||| ||||||||||||||||||| |||  |||||||||  ||||||||  |||    
T  20400772 catacgtagggttcggaaaagggtcccgctatttagtgtactgtacgcagtcttaccctgttttttacacaagagattgtttccataacttgaacctgtg 20400673  T
Q  216 acctttc 222  Q
    |||||||    
T  20400672 acctttc 20400666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 222
Target Start/End: Complemental strand, 32068182 - 32068095
Alignment:
Q  134 aaggggtcccaccattt-ggtgtattatacgcagccttaccctgttttttacacagaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||||||||||| |||||||| ||  |||| ||| |||||||||||||||  ||  |||||||||||||||||  ||||||||||    
T  32068182 aaggggtcccaccattttggtgtattgtaaacagcattatcctgttttttacacaagag--gtttccaagacttgaacatgtgacctttc 32068095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 8409311 - 8409242
Alignment:
Q  154 gtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||| ||||||||||||||||||||||||||| ||| |  ||||||| ||||||||  |||||||||||    
T  8409311 gtattgtacgcagccttaccctgttttttacacaagaggcagtttccaggacttgaatccgtgacctttc 8409242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 9161213 - 9161122
Alignment:
Q  133 gaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    |||||||||||||||||  || |||||| ||||||||||||| ||| ||||||||| ||| | |||||||| |||||||||  ||||||||||    
T  9161213 gaaggggtcccaccattattgatgtattgtacgcagccttactctg-tttttacacaagaggctgtttccaggacttgaacctgtgacctttc 9161122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 149
Target Start/End: Complemental strand, 6808528 - 6808468
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatt 149  Q
    |||||| |||||||||| ||||||||| |||||| |||||  |||||||||||||||||||    
T  6808528 agggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggggtcccaccatt 6808468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 210
Target Start/End: Complemental strand, 12228469 - 12228369
Alignment:
Q  111 ctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagt-tgtttccaagacttgaa 209  Q
    ||||||| ||| |||| | |||||||||||||||| || ||||||||| |||||| | ||| ||| ||||||| |||  ||| ||||||||| |||||||    
T  12228469 ctcccacttacgtaggttatgggaaggggtcccactatctggtgtattgtacgcaactttatcctattttttaaacaagagtctgtttccaaaacttgaa 12228370  T
Q  210 c 210  Q
    |    
T  12228369 c 12228369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 222
Target Start/End: Complemental strand, 17432395 - 17432339
Alignment:
Q  167 ccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    |||||||||||||||||||| ||| |||||||||| |||||||||  ||||||||||    
T  17432395 ccttaccctgttttttacacaagatgttgtttccaggacttgaacctgtgacctttc 17432339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 32728177 - 32728292
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttaca-cagaagttgtttccaagact 205  Q
    |||| |||| ||||| |||||| |||||| ||| || || ||||||| |||| ||| ||| ||||||||||||||||||  ||| ||||||||||| |||    
T  32728177 aaagttcccgcatacgtagggtctgggaaagggacc-actatttggtatattgtacacagtcttaccctgttttttacataagaggttgtttccaaaact 32728275  T
Q  206 tgaactcgtgacctttc 222  Q
    ||||   ||||||||||    
T  32728276 tgaatctgtgacctttc 32728292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 24097668 - 24097580
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    |||||||||||||||||||||||    | || ||||||||||||||||||||| || ||| | || ||| | ||||| |||||||||||||||    
T  24097668 gggaaggggtcccaccatttggt----tgtaagcagccttaccctgttttttatacaagaggctggttcgaggacttaaactcgtgacctttc 24097580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 13267858 - 13267789
Alignment:
Q  90 agggcagcccggtgcaca-aagctcccacatacatagggtttgggaaggggtcccaccatttggtgtatt 158  Q
    |||||| ||||||||||  |||||||| |||||  |||||   |||||||||||||||||||||||||||    
T  13267858 agggcaacccggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtatt 13267789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 23240870 - 23240958
Alignment:
Q  133 gaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||||||||| ||||| |||| ||||||  |||||||||||||  ||| ||| | |||||||| |||||| ||  ||||||||||    
T  23240870 gaaggggtcccaccaattggtatattgtacgcaaacttaccctgttttacaca-agaggctgtttccaggacttgcacctgtgacctttc 23240958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 383781 - 383837
Alignment:
Q  108 aagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgc 164  Q
    |||||||| |||||  ||||| || ||||||||||||| |||||||||||| |||||    
T  383781 aagctcccgcatacgcagggtctgagaaggggtcccacaatttggtgtattgtacgc 383837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 14341134 - 14341166
Alignment:
Q  151 ggtgtattatacgcagccttaccctgtttttta 183  Q
    |||||||| ||||||||||||||||||||||||    
T  14341134 ggtgtattgtacgcagccttaccctgtttttta 14341166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 182
Target Start/End: Original strand, 27855500 - 27855532
Alignment:
Q  150 tggtgtattatacgcagccttaccctgtttttt 182  Q
    |||||||||||||||||||||||||| ||||||    
T  27855500 tggtgtattatacgcagccttaccctatttttt 27855532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 65; Significance: 1e-28; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 46964 - 46832
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-a 187  Q
    |||||| |||||||||| ||||||||| |||||  |||||  |||||||||||||||||||||||||||| |||||| ||||||||| |||||||||| |    
T  46964 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttacacaa 46865  T
Q  188 gaagttgtttccaagacttgaactcgtgacctt 220  Q
    || ||||||||||  |||||||| |||||||||    
T  46864 gaggttgtttccagcacttgaacccgtgacctt 46832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 107 - 187
Target Start/End: Original strand, 24792 - 24872
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacaca 187  Q
    ||||||||| |||||  |||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  24792 aaagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtgttgtacgcagccttaccctgttttttacaca 24872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 43745 - 43699
Alignment:
Q  134 aaggggtcccaccatttggtgtattatacgcagccttaccctgtttt 180  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||    
T  43745 aaggggtcccaccatttggtgtattgtacgcagccttaccttgtttt 43699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 46727 - 46796
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccacca-tttggtgtattatacgcagccttaccct 175  Q
    ||||||||| |||||  ||||| |||||||||||||||||| |||||| |||| || ||| |||||||||    
T  46727 aaagctcccgcatacgcagggtctgggaaggggtcccaccattttggtatattgtatgcatccttaccct 46796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 24449023 - 24448891
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacag 188  Q
    |||||| |||||||||| ||||||||  |||||  |||||  |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||     
T  24449023 agggcaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctattttttacacaa 24448924  T
Q  189 aa-gttgtttccaagacttgaactcgtgacctt 220  Q
    || | |||||||| ||||||||| |||||||||    
T  24448923 aaggctgtttccaggacttgaacccgtgacctt 24448891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 38879716 - 38879580
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac 186  Q
    |||||| |||||||||| ||||||||| |||||  |||||  |||||||||||||||||||  ||||||||| |||||||||||||||||||||||| ||    
T  38879716 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttatac 38879617  T
Q  187 -agaagttgtttccaagacttgaactcgtgacctttc 222  Q
     ||| | |||||||| ||||||||| |||||||||||    
T  38879616 aagaggctgtttccaggacttgaacccgtgacctttc 38879580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 95 - 222
Target Start/End: Complemental strand, 39301251 - 39301122
Alignment:
Q  95 agcccggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccattt-ggtgtattatacgcagccttaccctgttttttacac-agaagt 192  Q
    |||||||||||| || |||||||||||  |||||  |||||||||||||||| ||| |||| |||||||||| |||||||||||||| ||||| ||| ||    
T  39301251 agcccggtgcactaaactcccacatacggagggtccgggaaggggtcccacctttttggtgcattatacgcatccttaccctgttttatacacaagaggt 39301152  T
Q  193 tgtttccaagacttgaactcgtgacctttc 222  Q
    |||| ||||||||||||| |||||||||||    
T  39301151 tgttcccaagacttgaacccgtgacctttc 39301122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 24323708 - 24323829
Alignment:
Q  90 agggcagcccggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-ag 188  Q
    ||||||| || ||||||||||||||| |||| | ||||| |||||||||||||||| |||||| ||||||||||||  |||||||||| |||||||| ||    
T  24323708 agggcagtccagtgcacaaagctcccgcatatacagggtctgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaag 24323807  T
Q  189 aagttgtttccaagacttgaac 210  Q
    | ||||||||||  ||||||||    
T  24323808 aggttgtttccagaacttgaac 24323829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 24360332 - 24360453
Alignment:
Q  90 agggcagcccggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-ag 188  Q
    ||||||| || ||||||||||||||| |||| | ||||| |||||||||||||||| |||||| ||||||||||||  |||||||||| |||||||| ||    
T  24360332 agggcagtccagtgcacaaagctcccgcatatacagggtctgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaag 24360431  T
Q  189 aagttgtttccaagacttgaac 210  Q
    | ||||||||||  ||||||||    
T  24360432 aggttgtttccagaacttgaac 24360453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 32703555 - 32703423
Alignment:
Q  90 agggcagcccggtgcacaa-agctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacag 188  Q
    |||||| |||||||||| | ||||||| ||||   |||||  |||||||||||||||||||||||||||| |||||||||||||||||||||  ||| ||    
T  32703555 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacaca-ag 32703457  T
Q  189 aagttgtttccaagacttgaactcgtgacctttc 222  Q
    | | |||||||| ||||||||| |||||||||||    
T  32703456 aggctgtttccaggacttgaacccgtgacctttc 32703423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 107 - 218
Target Start/End: Complemental strand, 43574721 - 43574609
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagact 205  Q
    ||||||||| |||||  |||||  ||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||| |||  ||||||||| ||||    
T  43574721 aaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtatattgtacgcagccttaccctgttttctacacaagagattgtttccaggact 43574622  T
Q  206 tgaactcgtgacc 218  Q
    ||||| |||||||    
T  43574621 tgaacacgtgacc 43574609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 27328869 - 27328751
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaaga 203  Q
    ||||||||| |||||  |||||| |||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||| |||   |||||||| ||    
T  27328869 aaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccagga 27328770  T
Q  204 cttgaactcgtgacctttc 222  Q
    |||||||  ||||||||||    
T  27328769 cttgaacctgtgacctttc 27328751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 3771472 - 3771379
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttttt 182  Q
    ||||||||||||||||| |||||||||||||||| || ||  ||||||||||||||||| |||||||||| | | |||||||||||||||||||    
T  3771472 agggcagcccggtgcactaaagctcccacatacacagagtccgggaaggggtcccaccaattggtgtattgttcacagccttaccctgtttttt 3771379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 8170028 - 8170118
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaa-gttgtttccaagacttgaactcgtgacctttc 222  Q
    |||||||||||||||||||||||||||| |||||||||||||||||  ||||||||| || | |||||||| ||||||||| |||||||||||    
T  8170028 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaaaaggctgtttccaggacttgaacccgtgacctttc 8170118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 41014408 - 41014320
Alignment:
Q  132 ggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctt 220  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||| | |||||||| ||||||||| |||||||||    
T  41014408 ggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacttgaacccgtgacctt 41014320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 217
Target Start/End: Complemental strand, 41426040 - 41425952
Alignment:
Q  130 tgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgac 217  Q
    |||||||||||||||||| |||||||||| || |||||||||||||||||||||||| | ||||||||||||  |||||||| ||||||    
T  41426040 tgggaaggggtcccaccaattggtgtattgtatgcagccttaccctgttttttacacaataagttgtttccagaacttgaacccgtgac 41425952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 43334337 - 43334201
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt--ggtgtattatacgcagccttaccctgtt-ttttaca 185  Q
    |||||| |||||||||| ||||||||| ||| |  |||||  ||||||||||||||||||||  |||||||| ||||||||||||||||||| |||||||    
T  43334337 agggcaacccggtgcactaaagctcccgcat-cgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttttaca 43334239  T
Q  186 ca-gaagttgtttccaagacttgaactcgtgacctttc 222  Q
    || || | |||||||| ||||||||| |||||||||||    
T  43334238 caggaggctgtttccaggacttgaacccgtgacctttc 43334201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 131 - 220
Target Start/End: Original strand, 4619148 - 4619240
Alignment:
Q  131 gggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctt 220  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||| ||| | | |||||| ||||||||| |||||||||    
T  4619148 gggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctatttccaggacttgaacccgtgacctt 4619240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 7097762 - 7097854
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttt 181  Q
    ||||||||  ||||||| ||||||||| |||||  |||||| ||||||||||| |||||||||||||||| |||||| |||||||||||||||    
T  7097762 agggcagcatggtgcactaaagctcccgcatacgcagggttcgggaaggggtctcaccatttggtgtattgtacgcaaccttaccctgttttt 7097854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 19142987 - 19143066
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaac 210  Q
    |||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| ||| |||||||||| |||||||||    
T  19142987 gggaaggggtcccaccatttggtgtactgtacgcagccttaccctg-tttttacacaagaggttgtttccaggacttgaac 19143066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 222
Target Start/End: Original strand, 28516470 - 28516570
Alignment:
Q  124 agggtttgggaaggggtcccaccatttgg-tgtattatacgcagccttaccctgttttttacaca-gaagttgtttccaagacttgaactcgtgaccttt 221  Q
    ||||| |||||| |||||||||||||| | |||||| ||||||||| || ||||||||||||||| || | |||||||||||||||||| ||||||||||    
T  28516470 agggtctgggaatgggtcccaccattttgatgtattgtacgcagccctagcctgttttttacacaagaggatgtttccaagacttgaacccgtgaccttt 28516569  T
Q  222 c 222  Q
    |    
T  28516570 c 28516570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 187
Target Start/End: Original strand, 16880656 - 16880747
Alignment:
Q  97 cccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacaca 187  Q
    |||||||||| ||||||||| |||||  | |||  |||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  16880656 cccggtgcactaaagctcccgcatacgcatggtccgggaagtggtcacaccatttggtgtattgtacgcagccttaccctgttttttacaca 16880747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 90 - 187
Target Start/End: Complemental strand, 29334529 - 29334430
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatt-tggtgtattatacgcagccttaccctgttttttacaca 187  Q
    ||||||||||||||||  |||| ||||||||||  |||||  ||||| ||||||||||||| ||||||||| |||||||||||||| |||||||||||||    
T  29334529 agggcagcccggtgcattaaagatcccacatacgcagggtccgggaatgggtcccaccattctggtgtattgtacgcagccttaccttgttttttacaca 29334430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 35710402 - 35710312
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||||||||||||||||||||||  ||||||||||||||| ||||  ||| ||| | |||||||| ||||||||| |||||||||||    
T  35710402 gggaaggggtcccaccatttggtgtattgaacgcagccttaccctattttacaca-agaggctgtttccaggacttgaacccgtgacctttc 35710312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 148 - 222
Target Start/End: Original strand, 42924895 - 42924970
Alignment:
Q  148 tttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||||| |||||| |||||||||||||||||||| ||| ||||||| || |||||||||||||||||||||    
T  42924895 tttggtgtattgtacgcaaccttaccctgttttttacacaagatgttgttttcaggacttgaactcgtgacctttc 42924970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 1565564 - 1565430
Alignment:
Q  90 agggcagcccggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctg-ttttttacac-a 187  Q
    |||||| |||||||||| |||||||||||||   |||||  ||||||||||||| |||||||||| ||| ||||||||||||   || |||||||| | |    
T  1565564 agggcaacccggtgcactaagctcccacatatgcagggtccgggaaggggtcccgccatttggtgcattgtacgcagccttaatatgtttttttactcaa 1565465  T
Q  188 gaagttgtttccaagacttgaactcgtgacctttc 222  Q
    || |||||||||| ||||||||| || ||||||||    
T  1565464 gaggttgtttccaggacttgaacccgcgacctttc 1565430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 7368528 - 7368438
Alignment:
Q  91 gggcagcccggtgcacaa-agctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttt 180  Q
    ||||| |||||||||| | ||||||||||||   |||||  ||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  7368528 gggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagccttaccctgtttt 7368438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 22600545 - 22600455
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaa-gttgtttccaagacttgaactcgtgacctt 220  Q
    |||||||| ||||||||||||||||||| ||| |||||||||||||| ||||||||| ||  ||||||||| ||||||||| ||| |||||    
T  22600545 gggaagggatcccaccatttggtgtattgtacacagccttaccctgtgttttacacaaaatattgtttccaggacttgaacccgtaacctt 22600455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 222
Target Start/End: Original strand, 34074569 - 34074698
Alignment:
Q  93 gcagcccggtgcacaaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaag 191  Q
    |||||||||||||| | |||||| |||||  |||||||||||||||| ||  ||||||||||||||  ||||| ||||||  |||||||||||| ||| |    
T  34074569 gcagcccggtgcacta-gctcccccatacgcagggtttgggaaggggccctgccatttggtgtattgaacgcaaccttactgtgttttttacacaagagg 34074667  T
Q  192 ttgtttccaagacttgaactcgtgacctttc 222  Q
     |||||| | |||||||||| ||||||||||    
T  34074668 ctgtttctaggacttgaacttgtgacctttc 34074698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 221
Target Start/End: Complemental strand, 2838867 - 2838779
Alignment:
Q  133 gaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgaccttt 221  Q
    |||||| ||||||||||||||||||| |||||||||||||||||| |||||||| ||| | ||||||  |||||||| ||||||||||||    
T  2838867 gaagggatcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagatgctgtttctgagacttgacctcgtgaccttt 2838779  T

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Target: chr5; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 13801811 - 13801869
Alignment:
Q  131 gggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacaca 187  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||    
T  13801811 gggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacaca 13801869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 34154858 - 34154903
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctg 176  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  34154858 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctg 34154903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 183
Target Start/End: Complemental strand, 30006456 - 30006364
Alignment:
Q  92 ggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttttta 183  Q
    |||| |||||||||| ||||||||| ||||||||||    |||||||||||||||||||| ||||| | ||| ||||||||||||||| ||||    
T  30006456 ggcaacccggtgcactaaagctcccgcatacataggccccgggaaggggtcccaccatttagtgtaatgtacacagccttaccctgttgttta 30006364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 208972 - 209062
Alignment:
Q  132 ggaaggggtcccaccattt-ggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgaccttt 221  Q
    ||||||||||||||||||| ||||||||  | |||||||||||||| ||||||||| ||| |||||| ||| |||||||||| |||||||||    
T  208972 ggaaggggtcccaccattttggtgtattgaatgcagccttaccctg-tttttacacaagaggttgttgccaggacttgaacttgtgaccttt 209062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 20135697 - 20135639
Alignment:
Q  131 gggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgttttttacaca 187  Q
    |||||||||||||||||||  ||||||||| |||||||||||||| |||||||||||||    
T  20135697 gggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttacaca 20135639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 12006330 - 12006466
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccat--ttggtgtattatacgcagccttaccctgttttttaca- 185  Q
    |||||| | |||||||| ||||||||| ||||   ||||| |||||||||||||||||||  |||||||||| || | ||||||||||| |||||||||     
T  12006330 agggcaacacggtgcactaaagctcccgcataggcagggtctgggaaggggtcccaccattattggtgtattgtatggagccttaccctattttttacat 12006429  T
Q  186 cagaagttgtttccaagacttgaa-ctcgtgacctttc 222  Q
     ||| ||||||||| ||||||||| | |||||||||||    
T  12006430 aagaggttgtttcc-agacttgaaccccgtgacctttc 12006466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 1405277 - 1405188
Alignment:
Q  132 ggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttaca-cagaagttgtttccaagacttgaactcgtgacctt 220  Q
    |||| |||||||||||||||||||||| ||||||  ||||| || ||||||| |  ||| |||||||||| ||||||||| |||||||||    
T  1405277 ggaaagggtcccaccatttggtgtattgtacgcaaacttactctattttttatataagaggttgtttccaggacttgaacccgtgacctt 1405188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 16957447 - 16957378
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtatt 158  Q
    |||||| |||||||||| ||||||||| |||||  |||||  ||||||||||||||||||||||||||||    
T  16957447 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtatt 16957378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 23974840 - 23974781
Alignment:
Q  162 cgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctt 220  Q
    |||||||||||||| |||||||||| ||| |||||||||| ||||||||| |||||||||    
T  23974840 cgcagccttaccctcttttttacacaagaggttgtttccaggacttgaacccgtgacctt 23974781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 22907867 - 22907959
Alignment:
Q  90 agggcagcccggtgcacaaagctcccacatacatagggtttggga-aggggtcccaccatttggtgtattatacgcagccttaccctgttttt 181  Q
    |||||||||| || |||||||||||  || ||| |  || ||||| |||||||||||||||||||||||| || ||| |||||| ||||||||    
T  22907867 agggcagccctgttcacaaagctcctgcacacacaatgtctgggagaggggtcccaccatttggtgtattgtatgcaaccttactctgttttt 22907959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 39801647 - 39801591
Alignment:
Q  92 ggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccacca 147  Q
    |||| |||||||||| ||||||||| ||||| |||||| ||||||||||||||||||    
T  39801647 ggcaacccggtgcactaaagctcccgcatacgtagggtctgggaaggggtcccacca 39801591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 1850729 - 1850639
Alignment:
Q  132 ggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||| |||||||||||||| |||||| |||||| |||||  ||| ||||||||| ||| ||| |||||  ||||||||| |||||||||||    
T  1850729 ggaagtggtcccaccatttgatgtattgtacgcacccttattctg-tttttacacaagaggttatttccgggacttgaacccgtgacctttc 1850639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 12575662 - 12575753
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccacca-tttggtgtattatacgcagccttaccctgttt 179  Q
    ||||||||||||||||| ||||||||  |||||  |||||   |||||||||||||||| ||||||||||| |||||| | ||| |||||||    
T  12575662 agggcagcccggtgcaccaaagctcctgcatacgcagggtccaggaaggggtcccaccattttggtgtattgtacgcaactttagcctgttt 12575753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 22025601 - 22025542
Alignment:
Q  164 cagccttaccctgttttttacac-agaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||||||||||||||||| ||| | |||||||| ||||||||| | |||||||||    
T  22025601 cagccttaccctgttttttacacaagaggctgtttccaggacttgaacccatgacctttc 22025542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 37024629 - 37024690
Alignment:
Q  160 tacgcagccttaccctgttttttacacagaagttgtttccaagacttgaactcgtgacctttc 222  Q
    |||||||||||||||||||||  ||| ||| | |||||||| ||||||||| |||||||||||    
T  37024629 tacgcagccttaccctgttttacaca-agaggctgtttccaggacttgaacccgtgacctttc 37024690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 11657736 - 11657785
Alignment:
Q  124 agggtttgggaaggggtcccacca-tttggtgtattatacgcagccttac 172  Q
    |||||| ||||||||||||||||| ||||||||||| || ||||||||||    
T  11657736 agggttcgggaaggggtcccaccattttggtgtattgtatgcagccttac 11657785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 12477164 - 12477205
Alignment:
Q  131 gggaaggggtcccacca-tttggtgtattatacgcagcctta 171  Q
    ||||||||||||||||| ||||||||||| ||||||||||||    
T  12477164 gggaaggggtcccaccattttggtgtattgtacgcagcctta 12477205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 210
Target Start/End: Complemental strand, 23719 - 23610
Alignment:
Q  102 tgcacaaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttcca 200  Q
    ||||||||||||||||||||  | ||| |||||||||||||||||||||| |  ||| |||||||||| |||||||||||||||| ||| ||||||| ||    
T  23719 tgcacaaagctcccacatactcaaggtctgggaaggggtcccaccatttgctacattgtacgcagcctcaccctgttttttacacaagaggttgtttgca 23620  T
Q  201 agacttgaac 210  Q
    ||||||||||    
T  23619 agacttgaac 23610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 59112 - 58976
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccattt--ggtgtattatacgcagccttaccctgttttttacac 186  Q
    |||||| |||| ||||| ||||||||| |||||  || || |||||||||||||||||||||  |||||||| ||||||| |||||||||||||||| ||    
T  59112 agggcaacccgatgcactaaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttatac 59013  T
Q  187 -agaagttgtttccaagacttgaactcgtgacctttc 222  Q
     ||| | |||||||| ||||||||| |||||||||||    
T  59012 aagaggctgtttccaggacttgaacccgtgacctttc 58976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 107 - 220
Target Start/End: Complemental strand, 10925 - 10811
Alignment:
Q  107 aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-agaagttgtttccaagact 205  Q
    ||||||||| |||||  |||||  ||||||||||||||||||||||||||||  |||||||| ||||||||||||||||| ||| ||||||| ||   ||    
T  10925 aaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattggacgcagccctaccctgttttttacacaagaggttgttttcagacct 10826  T
Q  206 tgaactcgtgacctt 220  Q
    ||||| |||||||||    
T  10825 tgaacccgtgacctt 10811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 13026 - 13159
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacac-a 187  Q
    |||||| |||||||||| ||||| ||| |||||  ||||| |||||||||||||||||||| |||||||| |||||||||||||| || ||||||| | |    
T  13026 agggcaacccggtgcactaaagcccccgcatacgcagggtctgggaaggggtcccaccattcggtgtattgtacgcagccttaccttg-tttttacgcaa 13124  T
Q  188 gaagttgtttccaagacttgaactcgtgacctttc 222  Q
    || | |||||||| |||||||||  ||||||||||    
T  13125 gaggctgtttccaggacttgaaccggtgacctttc 13159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 30710 - 30578
Alignment:
Q  90 agggcagcccggtgcacaa-agctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacag 188  Q
    |||||| |||||||||| | ||||||| ||||   |||||  |||||||||||||||||||||||||||| ||||||||| |||||||||||  ||| ||    
T  30710 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccctaccctgttttacaca-ag 30612  T
Q  189 aagttgtttccaagacttgaactcgtgacctttc 222  Q
    | | |||||||| |||||||||  ||||||||||    
T  30611 aggctgtttccaggacttgaaccggtgacctttc 30578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 48636 - 48727
Alignment:
Q  90 agggcagcccggtgcacaa-agctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttt 180  Q
    |||||| |||||||||| | ||||||| ||||   |||||  |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  48636 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 48727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 10094 - 10184
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||||||||| |||||||||||| ||||||| ||||| |||||||  ||| ||| | |||||||| ||||||||| |||||||||||    
T  10094 gggaaggggtcccactatttggtgtattgtacgcagtcttactctgttttacaca-agaggctgtttccaggacttgaacccgtgacctttc 10184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 20422 - 20512
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||||||||||| |||||||||||| ||||||| ||||| |||||||  ||| ||| | |||||||| ||||||||| |||||||||||    
T  20422 gggaaggggtcccactatttggtgtattgtacgcagtcttactctgttttacaca-agaggctgtttccaggacttgaacccgtgacctttc 20512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 4260 - 4156
Alignment:
Q  122 atagggtttgggaaggggtcccaccattt---ggtgtattatacgcagccttaccctgttttttacaca-gaagttgtttccaagacttgaactcgtgac 217  Q
    |||||||  ||||||||||||||||| ||   |||||||| |||||| ||||| ||||| ||||||||| || |||||||||| ||||||||| ||||||    
T  4260 atagggtccgggaaggggtcccaccaattattggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgac 4161  T
Q  218 ctttc 222  Q
    |||||    
T  4160 ctttc 4156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 187
Target Start/End: Complemental strand, 3668 - 3579
Alignment:
Q  99 cggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacaca 187  Q
    |||||||| |||||| || |||||  |||||| |||||||||||||| |||| ||||||||||||||||||||||| | | |||||||||    
T  3668 cggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagccttaccttatattttacaca 3579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 35062 - 35110
Alignment:
Q  132 ggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttt 180  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||    
T  35062 ggaaagggtcccaccatttggtgtattgtacgcagccttaccctgtttt 35110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 1631 - 1721
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagttgtttccaagacttgaactcgtgacctttc 222  Q
    |||||||||||||| ||||||||||||| || ||||||||| ||||||||  ||| ||| ||||||| || ||||||||| | |||||||||    
T  1631 gggaaggggtcccatcatttggtgtattgtatgcagccttatcctgttttacaca-agaggttgttttcaggacttgaacccatgacctttc 1721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 11220 - 11130
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacagaagttgtttccaagacttgaactcgtgacctttc 222  Q
    ||||||| |||||||||||||||||||| || ||||||||||  ||||||  ||| ||| | |||||||| ||||||||| |||||||||||    
T  11220 gggaaggtgtcccaccatttggtgtattgtaagcagccttactttgttttacaca-agaggctgtttccaggacttgaacccgtgacctttc 11130  T

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Target: scaffold0180 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 174
Target Start/End: Original strand, 24177 - 24220
Alignment:
Q  131 gggaaggggtcccaccatttggtgtattatacgcagccttaccc 174  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  24177 gggaaggggtcccaccatttggtgtattgtacgcagccttaccc 24220  T

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Target: scaffold0018 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 217
Target Start/End: Original strand, 72869 - 72999
Alignment:
Q  90 agggcagcccggtgcac-aaagctcccacatacatagggtttgggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttttacacag 188  Q
    |||||| || ||||||| ||||||||| |||||  ||| |  |||||||||| | ||||||||||||||| || ||||||||||| |||||||||||||     
T  72869 agggcaacctggtgcactaaagctcccgcatacgcaggttccgggaaggggtactaccatttggtgtattgtaggcagccttaccgtgttttttacacaa 72968  T
Q  189 aag--ttgtttccaagacttgaactcgtgac 217  Q
     ||  ||||||| | ||||||||| ||||||    
T  72969 gagacttgtttctaggacttgaacccgtgac 72999  T

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Target: scaffold0005 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 226456 - 226500
Alignment:
Q  138 ggtcccaccatttggtgtattatacgcagccttaccctgtttttt 182  Q
    |||||||||||||| |||||| || ||||||||||||||||||||    
T  226456 ggtcccaccatttgatgtattgtatgcagccttaccctgtttttt 226500  T

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