View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18391_low_4 (Length: 532)

Name: NF18391_low_4
Description: NF18391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18391_low_4
NF18391_low_4
[»] chr2 (11 HSPs)
chr2 (11-386)||(1210305-1210686)
chr2 (391-517)||(1210716-1210842)
chr2 (16-75)||(15911481-15911540)
chr2 (17-78)||(17304586-17304647)
chr2 (17-77)||(38707596-38707656)
chr2 (11-74)||(13278394-13278457)
chr2 (17-75)||(17138052-17138110)
chr2 (34-77)||(41961404-41961447)
chr2 (17-76)||(45116782-45116841)
chr2 (17-75)||(38207188-38207246)
chr2 (15-75)||(6402581-6402641)
[»] chr3 (9 HSPs)
chr3 (17-77)||(40936913-40936973)
chr3 (17-75)||(32529503-32529561)
chr3 (17-77)||(36403061-36403121)
chr3 (17-76)||(10509603-10509662)
chr3 (17-75)||(149025-149083)
chr3 (17-79)||(53814645-53814707)
chr3 (17-77)||(47646648-47646708)
chr3 (11-70)||(41194092-41194151)
chr3 (29-74)||(49440654-49440699)
[»] chr1 (10 HSPs)
chr1 (17-79)||(3517957-3518019)
chr1 (17-71)||(48965273-48965327)
chr1 (17-75)||(14587725-14587783)
chr1 (17-76)||(37951999-37952057)
chr1 (11-76)||(12700919-12700984)
chr1 (17-54)||(46597514-46597551)
chr1 (11-75)||(22858456-22858520)
chr1 (41-76)||(3475664-3475699)
chr1 (17-72)||(44496187-44496242)
chr1 (17-75)||(29961095-29961153)
[»] chr8 (6 HSPs)
chr8 (17-77)||(40105630-40105690)
chr8 (17-75)||(6346999-6347057)
chr8 (26-78)||(20091262-20091314)
chr8 (11-74)||(8240363-8240426)
chr8 (26-76)||(43098929-43098979)
chr8 (26-77)||(29544102-29544153)
[»] chr4 (14 HSPs)
chr4 (17-76)||(45029402-45029461)
chr4 (17-78)||(45228785-45228846)
chr4 (17-76)||(35158415-35158474)
chr4 (17-80)||(52417314-52417377)
chr4 (17-75)||(55136364-55136422)
chr4 (17-74)||(16023572-16023629)
chr4 (17-74)||(28781152-28781209)
chr4 (26-78)||(49374019-49374071)
chr4 (17-75)||(9036480-9036538)
chr4 (17-75)||(40727723-40727781)
chr4 (17-75)||(45924302-45924360)
chr4 (26-76)||(46439725-46439775)
chr4 (26-75)||(28311276-28311325)
chr4 (26-70)||(38551653-38551697)
[»] chr6 (3 HSPs)
chr6 (18-75)||(438743-438800)
chr6 (17-75)||(303452-303510)
chr6 (17-57)||(31271065-31271105)
[»] chr7 (6 HSPs)
chr7 (15-75)||(34848254-34848314)
chr7 (11-77)||(36312455-36312521)
chr7 (17-75)||(46254564-46254622)
chr7 (26-72)||(14817036-14817082)
chr7 (26-72)||(15264032-15264078)
chr7 (17-79)||(44862711-44862773)
[»] chr5 (12 HSPs)
chr5 (17-77)||(12723367-12723427)
chr5 (17-80)||(13654675-13654738)
chr5 (17-76)||(37012563-37012622)
chr5 (26-75)||(16513984-16514033)
chr5 (17-77)||(12784850-12784910)
chr5 (17-77)||(13822453-13822513)
chr5 (40-70)||(9715697-9715727)
chr5 (41-79)||(37030654-37030692)
chr5 (11-76)||(8197105-8197170)
chr5 (26-75)||(37883125-37883174)
chr5 (16-76)||(8734392-8734450)
chr5 (26-78)||(37094240-37094292)


Alignment Details
Target: chr2 (Bit Score: 290; Significance: 1e-162; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 11 - 386
Target Start/End: Original strand, 1210305 - 1210686
Alignment:
Q  11 cagagatattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtcttttaat---aatgtgttgaattttcgtactacta 107  Q
    ||||| ||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||   ||||||||||||||||||||||||     
T  1210305 cagagctattttaataaattttacagggtgcgtaagaaggcagcagggtggaaaaagtaatagtcttttaataataatgtgttgaattttcgtactactg 1210404  T
Q  108 ctagagagtcctttagatcaaatttgattaatgccagtagttactactggtagttggagttctaatgtgaaagtttgactttgttgaccctcgctcagct 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1210405 ctagagagtcctttagatcaaatttgattaatgccagtagttactactggtagttggagttctcatgtgaaagtttgactttgttgaccctcgctcagct 1210504  T
Q  208 ataattaaggaagcttcacacatgtttttgctacttagtgtaccttacatgtttctttatgttgaattttagtagctgtagtatttttgttatcttcata 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1210505 ataattaaggaagcttcacacatgtttttgctacttagtgtaccttacatgtttctttacgttgaattttagtagctgtagtatttttgttatcttcata 1210604  T
Q  308 g-ctatataattgttg--nnnnnnnnntagaatagtctgtatgatgattttaaattttgttatttaattattgtgagcataa 386  Q
    |  |||||||||||||           |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1210605 gtatatataattgttgaaaaaaaaaaatagaatagtctgtatgatgattttaaattttgttatttaattattgtgagcataa 1210686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 391 - 517
Target Start/End: Original strand, 1210716 - 1210842
Alignment:
Q  391 gatacattatatacaataattagaattgaggttcaaattttaaattatccacttatttactttaatgggaagatgtaaaatcaaattttattcgtcattg 490  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1210716 gatacattatatataataattagaattgaggttcaaattttaaattatccacttatttactttaatgggaagatgtaaaatcaaattttattcgtcattg 1210815  T
Q  491 gttatatagaagatgtgaagagagaga 517  Q
     ||||||||||||||||||||||||||    
T  1210816 attatatagaagatgtgaagagagaga 1210842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 15911540 - 15911481
Alignment:
Q  16 atattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtc 75  Q
    |||||||| |||||||| |||||||||||||||||||||||||||  |||||||||||||    
T  15911540 atattttagtaaattttgcagggtgcgcgagaaggcagcagggtgggaaaagtaatagtc 15911481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 17304647 - 17304586
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtcttt 78  Q
    ||||||||| |||||| ||||| ||||||||||||||||||||| ||||| |||||||||||    
T  17304647 tattttaattaattttgcagggcgcgcgagaaggcagcagggtggaaaaaataatagtcttt 17304586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 38707596 - 38707656
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtctt 77  Q
    ||||||| |||||||| ||||||||||||||||||||||| |||  |||||||||||||||    
T  38707596 tattttagtaaatttttcagggtgcgcgagaaggcagcagagtgggaaaagtaatagtctt 38707656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 13278457 - 13278394
Alignment:
Q  11 cagagatattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagt 74  Q
    ||||| ||||||  |||||||||||||| |||||||||| |||||||||| |||||||||||||    
T  13278457 cagaggtatttttgtaaattttacagggcgcgcgagaagacagcagggtggaaaaagtaatagt 13278394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 17138052 - 17138110
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtc 75  Q
    ||||||| ||||||||| |||| ||||||| |||||||||||||  |||||||||||||    
T  17138052 tattttagtaaattttatagggcgcgcgaggaggcagcagggtgggaaaagtaatagtc 17138110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 41961447 - 41961404
Alignment:
Q  34 cagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtctt 77  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||||    
T  41961447 cagggcgcgcgagaaggcaacagggtggaaaaagtaatagtctt 41961404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 45116841 - 45116782
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtct 76  Q
    ||||||| |||||||| ||||| |||||||||| ||||| ||||  ||||||||||||||    
T  45116841 tattttagtaaattttgcagggcgcgcgagaagacagcatggtgggaaaagtaatagtct 45116782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 38207246 - 38207188
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtc 75  Q
    ||||||| |||||||| |||| |||||||| |||||||||||||  |||| ||||||||    
T  38207246 tattttagtaaattttgcaggatgcgcgaggaggcagcagggtgggaaaaataatagtc 38207188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 6402641 - 6402581
Alignment:
Q  15 gatattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtc 75  Q
    ||||||||| |||||||| ||||||||||||| |||  ||| ||||  |||||||||||||    
T  6402641 gatattttagtaaattttgcagggtgcgcgaggaggaggcatggtgggaaaagtaatagtc 6402581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 9e-19; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 40936973 - 40936913
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtctt 77  Q
    ||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||    
T  40936973 tattttaataaattttacagggtgcgcgagaaggcagtagggtgggaaaagtaatagtctt 40936913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 32529561 - 32529503
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtc 75  Q
    ||||||| ||||||||||||||  |||||||||||||||||||| ||||||||||||||    
T  32529561 tattttagtaaattttacagggcacgcgagaaggcagcagggtggaaaaagtaatagtc 32529503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 36403061 - 36403121
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtctt 77  Q
    ||||||| |||||||| ||||| ||||||| |||||||||||||| |||||||||||||||    
T  36403061 tattttagtaaattttgcagggcgcgcgaggaggcagcagggtgagaaaagtaatagtctt 36403121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 10509603 - 10509662
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtct 76  Q
    ||||||| |||||||| || || ||||||||||||||||||||| |||||||||||||||    
T  10509603 tattttagtaaattttgcaaggggcgcgagaaggcagcagggtggaaaaagtaatagtct 10509662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 149083 - 149025
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtc 75  Q
    ||||||| |||||||| ||||  ||||||||||||||||||||| ||||||||||||||    
T  149083 tattttagtaaatttttcaggacgcgcgagaaggcagcagggtggaaaaagtaatagtc 149025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 53814707 - 53814645
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtctttt 79  Q
    ||||||| |||||||| ||||  |||||||||||||||||||||  |||||||||||||||||    
T  53814707 tattttagtaaattttgcaggacgcgcgagaaggcagcagggtgggaaaagtaatagtctttt 53814645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 47646708 - 47646648
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtctt 77  Q
    ||||||| |||||||| || ||||| ||||||||||||| ||||  |||||||||||||||    
T  47646708 tattttagtaaattttgcacggtgcacgagaaggcagcatggtgggaaaagtaatagtctt 47646648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 41194092 - 41194151
Alignment:
Q  11 cagagatattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaa 70  Q
    |||| |||||||| |||||||| | ||| |||||||||||||||||||||  ||||||||    
T  41194092 cagaaatattttagtaaattttgccgggcgcgcgagaaggcagcagggtgggaaaagtaa 41194151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 49440654 - 49440699
Alignment:
Q  29 ttttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagt 74  Q
    |||| ||||| ||||||||||||| ||||||| |||||||||||||    
T  49440654 ttttgcagggcgcgcgagaaggcaacagggtggaaaaagtaatagt 49440699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 3517957 - 3518019
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtctttt 79  Q
    ||||||| |||||||| |||||||||||||||||||||||||||  |||||||||||||||||    
T  3517957 tattttagtaaattttgcagggtgcgcgagaaggcagcagggtgggaaaagtaatagtctttt 3518019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 48965273 - 48965327
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaat 71  Q
    ||||||| |||||||||||||| |||| |||||||||||||||||||||||||||    
T  48965273 tattttagtaaattttacagggcgcgcaagaaggcagcagggtgaaaaaagtaat 48965327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 14587725 - 14587783
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtc 75  Q
    ||||||| |||||||| ||||||||| |||||||||||||||||  |||||||||||||    
T  14587725 tattttagtaaattttgcagggtgcgtgagaaggcagcagggtgggaaaagtaatagtc 14587783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 37952057 - 37951999
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtct 76  Q
    ||||||| |||||||| |||||||| ||||||||||||||||||  ||||||||||||||    
T  37952057 tattttagtaaattttgcagggtgcacgagaaggcagcagggtg-gaaaagtaatagtct 37951999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 12700919 - 12700984
Alignment:
Q  11 cagagatattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtct 76  Q
    ||||||||||||| |||||||| |||||  |||||| |||||||||  || |||||||||||||||    
T  12700919 cagagatattttagtaaattttgcagggcacgcgaggaggcagcagaatggaaaaagtaatagtct 12700984  T

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Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 46597514 - 46597551
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagc 54  Q
    |||||||||||||||| |||||||||||||||||||||    
T  46597514 tattttaataaattttgcagggtgcgcgagaaggcagc 46597551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 22858520 - 22858456
Alignment:
Q  11 cagagatattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtc 75  Q
    ||||| ||||||| ||||||||  |||||||||||| |||||||| | ||| |||||||||||||    
T  22858520 cagaggtattttagtaaattttgtagggtgcgcgaggaggcagcaagatgagaaaagtaatagtc 22858456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 76
Target Start/End: Original strand, 3475664 - 3475699
Alignment:
Q  41 cgcgagaaggcagcagggtgaaaaaagtaatagtct 76  Q
    |||||||||||| |||||||||||||||||||||||    
T  3475664 cgcgagaaggcaacagggtgaaaaaagtaatagtct 3475699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 44496242 - 44496187
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaata 72  Q
    |||||||||||||||| ||||| ||||||||||||||||  |||  ||||||||||    
T  44496242 tattttaataaattttgcagggcgcgcgagaaggcagcatagtgggaaaagtaata 44496187  T

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Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 29961153 - 29961095
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtc 75  Q
    ||||||| |||||||  || ||||||||||||||||||||||||  |||| ||||||||    
T  29961153 tattttagtaaatttcgcatggtgcgcgagaaggcagcagggtgggaaaaataatagtc 29961095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 40105630 - 40105690
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtctt 77  Q
    |||||||||||||||| ||||| ||||||| ||||||||||||| ||||||||||||||||    
T  40105630 tattttaataaattttgcagggcgcgcgaggaggcagcagggtggaaaaagtaatagtctt 40105690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 6347057 - 6346999
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtc 75  Q
    ||||||| |||||||| ||||| ||||||||||||||||||||  ||||||||||||||    
T  6347057 tattttagtaaattttgcagggcgcgcgagaaggcagcagggtagaaaaagtaatagtc 6346999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 20091314 - 20091262
Alignment:
Q  26 aaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtcttt 78  Q
    ||||||| ||||| |||||||||||||||||||||  ||||||||||||||||    
T  20091314 aaattttgcagggcgcgcgagaaggcagcagggtgtgaaaagtaatagtcttt 20091262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 8240363 - 8240426
Alignment:
Q  11 cagagatattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagt 74  Q
    |||| |||||||| ||||||||  |||| ||||||| ||||||||||||| |||||||||||||    
T  8240363 cagaaatattttagtaaattttgtagggcgcgcgaggaggcagcagggtggaaaaagtaatagt 8240426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 43098929 - 43098979
Alignment:
Q  26 aaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtct 76  Q
    |||||||  ||||||||||||||||||||||||||  ||||||||||||||    
T  43098929 aaattttgaagggtgcgcgagaaggcagcagggtgggaaaagtaatagtct 43098979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 29544153 - 29544102
Alignment:
Q  26 aaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtctt 77  Q
    ||||||| ||||| || ||||||||||||||||||  |||||||||||||||    
T  29544153 aaattttgcagggcgcacgagaaggcagcagggtgggaaaagtaatagtctt 29544102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 8e-16; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 45029402 - 45029461
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtct 76  Q
    ||||||| |||||||| ||||||||| ||||||||||||||||| |||||||||||||||    
T  45029402 tattttagtaaattttgcagggtgcgggagaaggcagcagggtggaaaaagtaatagtct 45029461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 45228846 - 45228785
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtcttt 78  Q
    ||||||| |||||||| ||||| |||||||||| |||||||||| |||||||||||||||||    
T  45228846 tattttagtaaattttgcagggcgcgcgagaagacagcagggtggaaaaagtaatagtcttt 45228785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 35158474 - 35158415
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtct 76  Q
    ||||||| |||||||| ||||| ||||||| |||||||||||||  ||||||||||||||    
T  35158474 tattttagtaaattttgcagggcgcgcgaggaggcagcagggtgggaaaagtaatagtct 35158415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 52417314 - 52417377
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtctttta 80  Q
    ||||||| |||||||| |||||  |||||||||||||||||||   ||||||||||||||||||    
T  52417314 tattttagtaaattttgcagggcacgcgagaaggcagcagggtaggaaaagtaatagtctttta 52417377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 55136422 - 55136364
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtc 75  Q
    ||||||| |||||||| |||||||||  || ||||||||||||| ||||||||||||||    
T  55136422 tattttagtaaattttgcagggtgcgaaaggaggcagcagggtggaaaaagtaatagtc 55136364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 16023629 - 16023572
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagt 74  Q
    ||||||| |||||||| ||||||||||||||| |||| ||| || |||||||||||||    
T  16023629 tattttagtaaattttgcagggtgcgcgagaacgcagtaggatggaaaaagtaatagt 16023572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 28781152 - 28781209
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagt 74  Q
    ||||||| |||||||| |||||||| |||| |||||||| ||||| ||||||||||||    
T  28781152 tattttagtaaattttgcagggtgcacgaggaggcagcatggtgagaaaagtaatagt 28781209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 49374071 - 49374019
Alignment:
Q  26 aaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtcttt 78  Q
    ||||||| ||||| ||||||||||| |||||||||  ||||||||||||||||    
T  49374071 aaattttgcagggcgcgcgagaaggtagcagggtgggaaaagtaatagtcttt 49374019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 9036480 - 9036538
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtc 75  Q
    ||||||| |||||||| ||||| ||||||| ||||||  ||||| ||||||||||||||    
T  9036480 tattttagtaaattttgcagggcgcgcgaggaggcagtcgggtggaaaaagtaatagtc 9036538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 40727781 - 40727723
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtc 75  Q
    ||||||| |||||||| ||||||  ||||| |||||||||||||| ||||||| |||||    
T  40727781 tattttagtaaattttgcagggtatgcgaggaggcagcagggtgagaaaagtagtagtc 40727723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 45924360 - 45924302
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtc 75  Q
    |||||| | ||||||| || || ||||||||||||||||| ||| ||||||||||||||    
T  45924360 tatttttaaaaattttgcatggcgcgcgagaaggcagcagagtggaaaaagtaatagtc 45924302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 46439775 - 46439725
Alignment:
Q  26 aaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtct 76  Q
    ||||||||||||||||| ||||||||   ||||||| ||||||||||||||    
T  46439775 aaattttacagggtgcgggagaaggccatagggtgagaaaagtaatagtct 46439725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 28311276 - 28311325
Alignment:
Q  26 aaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtc 75  Q
    ||||||| ||||  |||||||||||||||||||||  |||||||||||||    
T  28311276 aaattttgcaggacgcgcgagaaggcagcagggtgggaaaagtaatagtc 28311325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 38551653 - 38551697
Alignment:
Q  26 aaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaa 70  Q
    ||||||| ||||| |||||||||||||||||||||  ||||||||    
T  38551653 aaattttgcagggcgcgcgagaaggcagcagggtgggaaaagtaa 38551697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 438800 - 438743
Alignment:
Q  18 attttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtc 75  Q
    |||||| |||||||| |||||||||||||||||||||| ||||  |||||||||||||    
T  438800 attttagtaaatttttcagggtgcgcgagaaggcagcatggtgggaaaagtaatagtc 438743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 303510 - 303452
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtc 75  Q
    ||||||| |||||||| |||| |||||||| || ||||||||||  |||||||||||||    
T  303510 tattttagtaaattttgcaggatgcgcgaggagacagcagggtgggaaaagtaatagtc 303452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 31271105 - 31271065
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagg 57  Q
    ||||||| |||||||| ||||| ||||||||||||||||||    
T  31271105 tattttagtaaattttgcagggcgcgcgagaaggcagcagg 31271065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000001; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 34848254 - 34848314
Alignment:
Q  15 gatattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtc 75  Q
    ||||||||||||||||||  ||| ||||||||||||||||||||||  |||| ||||||||    
T  34848254 gatattttaataaattttgtaggatgcgcgagaaggcagcagggtgggaaaaataatagtc 34848314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 36312455 - 36312521
Alignment:
Q  11 cagagatattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtctt 77  Q
    ||||| ||||||| ||||||||  || ||||||||| |||||||||||||  |||||||||||||||    
T  36312455 cagaggtattttagtaaattttgtagagtgcgcgaggaggcagcagggtgggaaaagtaatagtctt 36312521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 46254622 - 46254564
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtc 75  Q
    ||||||| |||||||| ||||| ||||||| |||||||||||||  |||||||||||||    
T  46254622 tattttagtaaattttgcagggcgcgcgaggaggcagcagggtgggaaaagtaatagtc 46254564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 14817036 - 14817082
Alignment:
Q  26 aaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaata 72  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||||    
T  14817036 aaattttgcaggacgcgcgagaaggcagtagggtgaaaaaagtaata 14817082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 15264032 - 15264078
Alignment:
Q  26 aaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaata 72  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||||    
T  15264032 aaattttgcaggacgcgcgagaaggcagtagggtgaaaaaagtaata 15264078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 44862773 - 44862711
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtctttt 79  Q
    ||||||| |||||||| ||||||||||||| |||||||| | ||| |||| ||||||| ||||    
T  44862773 tattttagtaaattttgcagggtgcgcgaggaggcagcaagatgagaaaaataatagtttttt 44862711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 12723427 - 12723367
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtctt 77  Q
    ||||||| |||||||| ||||| ||||||| |||||||||||||  |||||||||||||||    
T  12723427 tattttagtaaattttgcagggcgcgcgaggaggcagcagggtgggaaaagtaatagtctt 12723367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 13654738 - 13654675
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtctttta 80  Q
    ||||||| |||||||||||  |||| ||||||||||||||| ||  ||||||||||||||||||    
T  13654738 tattttagtaaattttacatagtgcacgagaaggcagcaggatgggaaaagtaatagtctttta 13654675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 37012622 - 37012563
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtct 76  Q
    |||||||||||||||| ||||| |||||| ||||||||| ||||| |||| |||||||||    
T  37012622 tattttaataaattttgcagggcgcgcgaaaaggcagcaaggtgagaaaaataatagtct 37012563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 16513984 - 16514033
Alignment:
Q  26 aaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtc 75  Q
    ||||||| ||||| |||||||||||||||||||||  |||||||||||||    
T  16513984 aaattttgcagggcgcgcgagaaggcagcagggtgggaaaagtaatagtc 16514033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 12784910 - 12784850
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtctt 77  Q
    ||||||| |||||  | ||||||||||||| |||||||||||||  |||||||||||||||    
T  12784910 tattttagtaaatggtgcagggtgcgcgaggaggcagcagggtgggaaaagtaatagtctt 12784850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 13822453 - 13822513
Alignment:
Q  17 tattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtctt 77  Q
    ||||||| |||||||| ||||| ||||||| |||||||| ||||  |||||||||||||||    
T  13822453 tattttagtaaattttgcagggcgcgcgaggaggcagcaaggtgggaaaagtaatagtctt 13822513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 70
Target Start/End: Original strand, 9715697 - 9715727
Alignment:
Q  40 gcgcgagaaggcagcagggtgaaaaaagtaa 70  Q
    |||||||||||||||||||||||||||||||    
T  9715697 gcgcgagaaggcagcagggtgaaaaaagtaa 9715727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 37030654 - 37030692
Alignment:
Q  41 cgcgagaaggcagcagggtgaaaaaagtaatagtctttt 79  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  37030654 cgcgagaaggcagcatggtggaaaaagtaatagtctttt 37030692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 8197170 - 8197105
Alignment:
Q  11 cagagatattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtct 76  Q
    ||||| ||||||| |||||||| ||| | | ||||||||||||| |||||  ||||||||||||||    
T  8197170 cagaggtattttagtaaattttgcagagcgtgcgagaaggcagcggggtgggaaaagtaatagtct 8197105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 37883174 - 37883125
Alignment:
Q  26 aaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtc 75  Q
    ||||||| ||||| |||||||||||||  |||||| ||||||||||||||    
T  37883174 aaattttgcagggcgcgcgagaaggcaatagggtggaaaaagtaatagtc 37883125  T

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Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 8734450 - 8734392
Alignment:
Q  16 atattttaataaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtct 76  Q
    |||||||| ||||||||||||| |||||||||||| ||||  ||| |||||||||||||||    
T  8734450 atattttagtaaattttacaggatgcgcgagaagg-agca-cgtggaaaaagtaatagtct 8734392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 37094292 - 37094240
Alignment:
Q  26 aaattttacagggtgcgcgagaaggcagcagggtgaaaaaagtaatagtcttt 78  Q
    ||||||||||||| |||||||||| || |||||||  |||||||||| |||||    
T  37094292 aaattttacagggcgcgcgagaagtcaacagggtgggaaaagtaatactcttt 37094240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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