View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18392_low_9 (Length: 289)
Name: NF18392_low_9
Description: NF18392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18392_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 16 - 274
Target Start/End: Original strand, 42033406 - 42033670
Alignment:
| Q |
16 |
attttgtttacatacaaacaaatgatacatac-----tattgtgattgattcggaatgtaaatgtatcggttgagagatttagcaaatggagcaatgtac |
110 |
Q |
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| T |
42033406 |
attttgtttacatacaaacaaatgatacatactatactattgtgattgattcggaatgtaaatgtatcggttgagagatttagcaaatggagcaatgtac |
42033505 |
T |
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| Q |
111 |
aagactttggagcaataatgaagcatgttgaattgttgattacgaatgttcctccatactgcaattgggtgcataactatgactatatacggcaacaccg |
210 |
Q |
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| T |
42033506 |
aagactttggagcaataatgaagcatgttgaattgttgattacgaatgttcctccatactgcaattgggtgcataactatgactatatacggcaacaccg |
42033605 |
T |
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| Q |
211 |
tcttccaggttcattttgtggaacataaaaaataaacccatc-ttagcttaacgtggtggttatt |
274 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
42033606 |
tcttccaggttcattttgtggaacataaaaaataaacccatctttagcttaacgtggtggttatt |
42033670 |
T |
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