View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18395_low_9 (Length: 285)

Name: NF18395_low_9
Description: NF18395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18395_low_9
NF18395_low_9
[»] chr7 (83 HSPs)
chr7 (1-275)||(5348433-5348707)
chr7 (4-243)||(42978589-42978828)
chr7 (4-238)||(37837336-37837570)
chr7 (4-243)||(47590290-47590529)
chr7 (4-243)||(8001419-8001658)
chr7 (4-238)||(12141185-12141420)
chr7 (4-243)||(34899480-34899719)
chr7 (13-238)||(46700023-46700248)
chr7 (10-238)||(9450015-9450243)
chr7 (4-243)||(39171463-39171702)
chr7 (12-243)||(39229002-39229231)
chr7 (10-243)||(48316685-48316918)
chr7 (11-243)||(38798767-38798999)
chr7 (4-243)||(19296849-19297088)
chr7 (10-243)||(45349672-45349905)
chr7 (1-243)||(26623662-26623905)
chr7 (11-243)||(28476206-28476444)
chr7 (4-243)||(19404630-19404869)
chr7 (16-243)||(48061413-48061640)
chr7 (1-243)||(25255203-25255445)
chr7 (61-243)||(35132983-35133165)
chr7 (10-243)||(39328666-39328896)
chr7 (1-222)||(41553328-41553552)
chr7 (1-220)||(24069290-24069512)
chr7 (4-238)||(13796807-13797044)
chr7 (4-243)||(30756692-30756931)
chr7 (4-229)||(9977097-9977318)
chr7 (40-238)||(28044634-28044832)
chr7 (74-243)||(40993206-40993375)
chr7 (58-228)||(22742977-22743147)
chr7 (50-243)||(11343835-11344027)
chr7 (10-229)||(25287073-25287292)
chr7 (11-137)||(22087303-22087429)
chr7 (1-142)||(41553753-41553897)
chr7 (4-238)||(3267095-3267324)
chr7 (12-221)||(24770233-24770442)
chr7 (57-238)||(35665013-35665194)
chr7 (1-139)||(41554101-41554242)
chr7 (38-208)||(38880485-38880656)
chr7 (116-243)||(48930798-48930925)
chr7 (6-196)||(5792777-5792967)
chr7 (38-243)||(29617573-29617778)
chr7 (62-158)||(24350797-24350891)
chr7 (174-243)||(28407791-28407860)
chr7 (162-222)||(3398327-3398387)
chr7 (52-142)||(27997118-27997205)
chr7 (10-104)||(969459-969556)
chr7 (69-228)||(4999917-5000076)
chr7 (16-89)||(1448825-1448901)
chr7 (16-89)||(20116588-20116664)
chr7 (16-89)||(23786581-23786657)
chr7 (38-238)||(31481977-31482173)
chr7 (16-84)||(42067061-42067132)
chr7 (12-123)||(3224403-3224517)
chr7 (179-227)||(17773414-17773462)
chr7 (180-243)||(27341705-27341768)
chr7 (16-93)||(6002027-6002107)
chr7 (16-89)||(22927865-22927941)
chr7 (16-93)||(31235783-31235863)
chr7 (16-89)||(35667227-35667303)
chr7 (168-238)||(46822621-46822690)
chr7 (186-243)||(35261464-35261521)
chr7 (1-88)||(25068058-25068147)
chr7 (14-93)||(32521918-32522000)
chr7 (30-185)||(4530081-4530236)
chr7 (77-152)||(28062187-28062262)
chr7 (161-220)||(49148011-49148070)
chr7 (16-89)||(433686-433762)
chr7 (16-89)||(14627874-14627950)
chr7 (16-85)||(32684674-32684746)
chr7 (16-89)||(46339060-46339136)
chr7 (186-243)||(433544-433601)
chr7 (186-243)||(17222853-17222910)
chr7 (110-243)||(26610653-26610785)
chr7 (186-243)||(34773878-34773935)
chr7 (186-243)||(46822182-46822239)
chr7 (63-123)||(1749140-1749200)
chr7 (186-238)||(21266557-21266609)
chr7 (50-126)||(24610160-24610236)
chr7 (186-238)||(31235642-31235694)
chr7 (186-238)||(32521787-32521839)
chr7 (186-238)||(32684835-32684887)
chr7 (186-238)||(35496033-35496085)
[»] chr5 (65 HSPs)
chr5 (4-238)||(38597773-38598007)
chr5 (4-243)||(13007205-13007444)
chr5 (13-243)||(25980143-25980372)
chr5 (27-238)||(10722760-10722971)
chr5 (12-238)||(13421917-13422143)
chr5 (4-243)||(9113598-9113837)
chr5 (4-243)||(24229657-24229896)
chr5 (2-243)||(37985986-37986227)
chr5 (12-243)||(6012011-6012242)
chr5 (21-243)||(34945386-34945608)
chr5 (60-238)||(41630534-41630712)
chr5 (10-243)||(6216881-6217114)
chr5 (61-243)||(28540779-28540961)
chr5 (11-225)||(35850782-35850996)
chr5 (58-243)||(2979179-2979364)
chr5 (58-243)||(14211257-14211442)
chr5 (11-238)||(31391631-31391858)
chr5 (59-243)||(26877982-26878165)
chr5 (4-238)||(26825406-26825640)
chr5 (38-243)||(35920869-35921074)
chr5 (63-238)||(15571521-15571697)
chr5 (10-243)||(11976808-11977041)
chr5 (4-238)||(8096376-8096609)
chr5 (12-238)||(14726339-14726565)
chr5 (58-243)||(19103340-19103525)
chr5 (13-238)||(38007343-38007567)
chr5 (27-243)||(7036218-7036433)
chr5 (4-235)||(7930153-7930384)
chr5 (13-243)||(8088085-8088317)
chr5 (98-220)||(14082292-14082414)
chr5 (4-158)||(11073858-11074012)
chr5 (79-238)||(39567321-39567480)
chr5 (4-124)||(38110940-38111063)
chr5 (38-227)||(41749336-41749525)
chr5 (4-243)||(19120886-19121127)
chr5 (11-238)||(10332425-10332656)
chr5 (14-89)||(7613053-7613131)
chr5 (16-243)||(34881726-34881943)
chr5 (63-220)||(1409533-1409690)
chr5 (151-243)||(11867772-11867864)
chr5 (108-243)||(11192459-11192594)
chr5 (6-113)||(11867646-11867753)
chr5 (16-243)||(16981298-16981518)
chr5 (16-94)||(36344481-36344562)
chr5 (16-93)||(7150326-7150406)
chr5 (16-89)||(27266854-27266930)
chr5 (180-222)||(31280881-31280923)
chr5 (16-89)||(41184435-41184511)
chr5 (186-243)||(43148896-43148953)
chr5 (180-248)||(32691109-32691177)
chr5 (16-89)||(2057833-2057909)
chr5 (174-220)||(28097305-28097351)
chr5 (16-89)||(43148739-43148815)
chr5 (186-243)||(7241953-7242010)
chr5 (186-243)||(7247128-7247185)
chr5 (186-243)||(8984858-8984915)
chr5 (16-76)||(10649652-10649715)
chr5 (186-243)||(15571076-15571133)
chr5 (186-243)||(19259665-19259722)
chr5 (16-84)||(30298216-30298287)
chr5 (186-238)||(4954161-4954213)
chr5 (60-124)||(16758572-16758636)
chr5 (13-88)||(19349679-19349757)
chr5 (14-89)||(42886484-42886562)
chr5 (186-238)||(43008173-43008225)
[»] chr6 (69 HSPs)
chr6 (4-238)||(29255324-29255557)
chr6 (10-243)||(34018544-34018777)
chr6 (4-238)||(33053046-33053280)
chr6 (11-242)||(30608389-30608619)
chr6 (4-238)||(127648-127879)
chr6 (4-243)||(606182-606421)
chr6 (4-243)||(3913447-3913686)
chr6 (4-243)||(23128596-23128835)
chr6 (2-243)||(26588345-26588589)
chr6 (77-238)||(20225902-20226063)
chr6 (77-238)||(22119886-22120047)
chr6 (1-243)||(30493504-30493749)
chr6 (58-243)||(546062-546248)
chr6 (4-222)||(7515096-7515314)
chr6 (62-243)||(14801863-14802044)
chr6 (32-236)||(12170474-12170678)
chr6 (4-243)||(29319750-29319990)
chr6 (16-198)||(4010430-4010611)
chr6 (4-238)||(32327098-32327329)
chr6 (12-199)||(3355103-3355290)
chr6 (2-247)||(31296793-31297041)
chr6 (27-243)||(67874-68090)
chr6 (4-243)||(8102697-8102943)
chr6 (78-243)||(30776715-30776880)
chr6 (12-210)||(6957136-6957334)
chr6 (1-238)||(28981149-28981389)
chr6 (21-235)||(30894595-30894808)
chr6 (38-217)||(528249-528428)
chr6 (40-238)||(9380037-9380235)
chr6 (58-225)||(1523440-1523607)
chr6 (108-238)||(7976065-7976195)
chr6 (68-238)||(27097520-27097690)
chr6 (174-243)||(9341524-9341593)
chr6 (11-124)||(24227724-24227837)
chr6 (38-114)||(31575509-31575585)
chr6 (180-238)||(21426564-21426622)
chr6 (10-217)||(1933591-1933801)
chr6 (14-89)||(25337574-25337652)
chr6 (163-217)||(13546600-13546654)
chr6 (16-93)||(35001596-35001676)
chr6 (39-124)||(11321461-11321546)
chr6 (174-243)||(14174944-14175013)
chr6 (174-243)||(14179480-14179549)
chr6 (163-224)||(14846113-14846174)
chr6 (163-236)||(32802683-32802756)
chr6 (16-89)||(8496973-8497049)
chr6 (2-96)||(13546683-13546777)
chr6 (16-89)||(23947313-23947389)
chr6 (186-243)||(17334920-17334977)
chr6 (186-243)||(35001757-35001814)
chr6 (186-238)||(23947175-23947227)
chr6 (180-243)||(8497129-8497192)
chr6 (78-217)||(31852092-31852231)
chr6 (180-243)||(32060030-32060093)
chr6 (16-89)||(4984562-4984638)
chr6 (14-67)||(8266646-8266702)
chr6 (1-47)||(20220853-20220899)
chr6 (1-47)||(22114837-22114883)
chr6 (16-89)||(25064242-25064318)
chr6 (16-93)||(28635112-28635192)
chr6 (16-89)||(33110617-33110693)
chr6 (50-238)||(679133-679320)
chr6 (186-243)||(12653111-12653168)
chr6 (186-243)||(16892669-16892726)
chr6 (186-243)||(25064403-25064460)
chr6 (186-238)||(28634971-28635023)
chr6 (17-115)||(30140523-30140627)
chr6 (11-47)||(32059894-32059930)
chr6 (186-242)||(33110778-33110834)
[»] chr8 (89 HSPs)
chr8 (16-243)||(23230634-23230861)
chr8 (12-247)||(3673428-3673663)
chr8 (32-243)||(31013479-31013690)
chr8 (16-238)||(5046744-5046966)
chr8 (4-236)||(10377668-10377900)
chr8 (4-243)||(7883112-7883351)
chr8 (12-247)||(9637276-9637511)
chr8 (4-238)||(16247099-16247333)
chr8 (4-221)||(20553134-20553351)
chr8 (6-238)||(27110341-27110573)
chr8 (27-243)||(33347392-33347607)
chr8 (4-243)||(37971262-37971501)
chr8 (10-238)||(7677159-7677387)
chr8 (11-243)||(28897695-28897927)
chr8 (4-221)||(20559637-20559854)
chr8 (4-221)||(20571199-20571416)
chr8 (1-217)||(5333402-5333621)
chr8 (4-243)||(15344285-15344526)
chr8 (4-243)||(15433350-15433591)
chr8 (4-243)||(15524654-15524895)
chr8 (13-243)||(1236568-1236800)
chr8 (12-243)||(24186532-24186762)
chr8 (11-238)||(45445687-45445914)
chr8 (77-243)||(16928628-16928794)
chr8 (61-243)||(18890570-18890752)
chr8 (8-243)||(25190936-25191173)
chr8 (12-249)||(29617139-29617379)
chr8 (58-243)||(41896550-41896735)
chr8 (10-238)||(40211178-40211406)
chr8 (4-238)||(471040-471276)
chr8 (13-243)||(27498237-27498465)
chr8 (10-243)||(14544766-14545007)
chr8 (4-243)||(40618944-40619183)
chr8 (12-236)||(17693491-17693716)
chr8 (4-220)||(28086706-28086923)
chr8 (58-243)||(43833867-43834051)
chr8 (63-243)||(14585715-14585895)
chr8 (67-243)||(42046263-42046439)
chr8 (13-225)||(1239286-1239500)
chr8 (58-214)||(39657487-39657643)
chr8 (39-238)||(33214547-33214746)
chr8 (10-238)||(36948314-36948541)
chr8 (38-221)||(14916081-14916263)
chr8 (78-229)||(29939353-29939504)
chr8 (51-246)||(34609859-34610057)
chr8 (1-221)||(8826185-8826407)
chr8 (104-235)||(7198074-7198205)
chr8 (12-198)||(8443427-8443616)
chr8 (100-243)||(30568192-30568335)
chr8 (40-154)||(8981178-8981292)
chr8 (16-93)||(44099925-44100005)
chr8 (1-243)||(24099127-24099371)
chr8 (52-128)||(19444050-19444126)
chr8 (13-235)||(3240365-3240590)
chr8 (16-89)||(4808977-4809053)
chr8 (16-89)||(9498594-9498670)
chr8 (16-89)||(9619352-9619428)
chr8 (16-89)||(11464184-11464260)
chr8 (50-238)||(21237815-21238001)
chr8 (16-93)||(28239846-28239926)
chr8 (16-89)||(35580470-35580546)
chr8 (165-243)||(41060134-41060212)
chr8 (16-85)||(42448026-42448098)
chr8 (202-243)||(8412393-8412434)
chr8 (106-238)||(8867886-8868021)
chr8 (16-84)||(11196902-11196973)
chr8 (186-247)||(11267182-11267243)
chr8 (186-243)||(15047066-15047123)
chr8 (14-93)||(27747104-27747186)
chr8 (186-238)||(42447885-42447937)
chr8 (62-137)||(26469123-26469198)
chr8 (166-221)||(35283256-35283311)
chr8 (16-89)||(2655883-2655959)
chr8 (174-216)||(14913237-14913279)
chr8 (16-89)||(29777232-29777308)
chr8 (12-123)||(31634273-31634386)
chr8 (107-243)||(34611897-34612035)
chr8 (38-124)||(39450554-39450640)
chr8 (151-201)||(41684508-41684558)
chr8 (16-89)||(43192341-43192417)
chr8 (186-243)||(4809138-4809195)
chr8 (174-235)||(12184438-12184499)
chr8 (174-235)||(12428866-12428927)
chr8 (16-88)||(34611817-34611892)
chr8 (186-243)||(43431913-43431970)
chr8 (186-243)||(43889977-43890034)
chr8 (186-238)||(11464345-11464397)
chr8 (186-238)||(11725854-11725906)
chr8 (51-91)||(26469231-26469271)
[»] chr2 (97 HSPs)
chr2 (10-238)||(4904024-4904252)
chr2 (27-237)||(17151433-17151644)
chr2 (12-243)||(18763463-18763694)
chr2 (4-242)||(7677748-7677986)
chr2 (6-243)||(25508942-25509179)
chr2 (11-243)||(31788451-31788682)
chr2 (4-243)||(38445153-38445392)
chr2 (49-239)||(33760071-33760261)
chr2 (11-243)||(1415551-1415783)
chr2 (16-243)||(1421675-1421902)
chr2 (4-243)||(37876480-37876719)
chr2 (57-243)||(12554055-12554241)
chr2 (4-243)||(4778740-4778979)
chr2 (4-243)||(5427743-5427981)
chr2 (4-238)||(9169137-9169371)
chr2 (13-243)||(30399903-30400139)
chr2 (10-243)||(31128659-31128887)
chr2 (4-243)||(7646460-7646704)
chr2 (4-243)||(27097281-27097519)
chr2 (16-238)||(33923704-33923926)
chr2 (4-236)||(19062228-19062465)
chr2 (10-238)||(43396997-43397226)
chr2 (4-238)||(11985112-11985343)
chr2 (32-238)||(28871667-28871873)
chr2 (12-209)||(4264467-4264664)
chr2 (10-238)||(19028793-19029021)
chr2 (62-243)||(10237090-10237271)
chr2 (4-229)||(31210492-31210720)
chr2 (15-243)||(8809278-8809505)
chr2 (4-243)||(36942996-36943234)
chr2 (27-238)||(33585614-33585825)
chr2 (13-238)||(32448495-32448725)
chr2 (58-235)||(3308986-3309163)
chr2 (1-242)||(10929645-10929890)
chr2 (1-243)||(37994260-37994510)
chr2 (13-243)||(17249021-17249253)
chr2 (10-243)||(24461430-24461669)
chr2 (58-243)||(14955570-14955755)
chr2 (50-243)||(29173591-29173786)
chr2 (80-238)||(29279449-29279607)
chr2 (11-243)||(4041468-4041700)
chr2 (13-224)||(23933512-23933726)
chr2 (12-196)||(39310774-39310957)
chr2 (16-238)||(35220324-35220549)
chr2 (4-238)||(36691861-36692095)
chr2 (4-191)||(7448234-7448421)
chr2 (96-224)||(12677344-12677471)
chr2 (16-238)||(18107629-18107848)
chr2 (3-238)||(29574507-29574745)
chr2 (106-238)||(17994605-17994741)
chr2 (52-243)||(28533828-28534019)
chr2 (1-243)||(34128558-34128803)
chr2 (38-130)||(41327524-41327616)
chr2 (11-235)||(6358763-6358982)
chr2 (12-238)||(37416702-37416931)
chr2 (173-238)||(19597995-19598060)
chr2 (74-227)||(41694678-41694831)
chr2 (54-227)||(14423362-14423539)
chr2 (16-243)||(9986195-9986413)
chr2 (2-89)||(36323854-36323941)
chr2 (57-243)||(16375979-16376165)
chr2 (174-243)||(4100493-4100561)
chr2 (51-243)||(19595774-19595969)
chr2 (11-142)||(42698676-42698807)
chr2 (16-89)||(3725190-3725266)
chr2 (50-136)||(36175477-36175563)
chr2 (4-89)||(4099090-4099175)
chr2 (108-243)||(8805957-8806094)
chr2 (65-228)||(14416208-14416372)
chr2 (12-70)||(12647967-12648028)
chr2 (77-120)||(16484681-16484724)
chr2 (166-243)||(280946-281024)
chr2 (155-221)||(13014819-13014885)
chr2 (16-89)||(26025405-26025481)
chr2 (16-89)||(27249146-27249222)
chr2 (16-93)||(45128214-45128294)
chr2 (16-88)||(30420688-30420763)
chr2 (18-89)||(36234020-36234094)
chr2 (179-235)||(41327901-41327957)
chr2 (38-89)||(459269-459320)
chr2 (179-242)||(7604338-7604401)
chr2 (14-88)||(37614121-37614198)
chr2 (16-89)||(6173642-6173718)
chr2 (16-85)||(7015710-7015782)
chr2 (16-89)||(20047077-20047153)
chr2 (16-89)||(41431038-41431114)
chr2 (186-243)||(4228294-4228351)
chr2 (186-243)||(7015564-7015621)
chr2 (182-239)||(10548352-10548409)
chr2 (186-243)||(21570261-21570318)
chr2 (186-243)||(27249004-27249061)
chr2 (186-243)||(31580508-31580565)
chr2 (174-243)||(32190821-32190890)
chr2 (180-225)||(42698616-42698661)
chr2 (38-114)||(11812704-11812780)
chr2 (18-93)||(27949438-27949516)
chr2 (202-238)||(27949613-27949649)
[»] chr3 (110 HSPs)
chr3 (5-243)||(21533682-21533920)
chr3 (14-243)||(52922990-52923219)
chr3 (4-243)||(33579856-33580095)
chr3 (4-238)||(9998443-9998677)
chr3 (4-243)||(6954569-6954808)
chr3 (12-243)||(20464843-20465074)
chr3 (10-237)||(23799789-23800016)
chr3 (4-243)||(48650607-48650846)
chr3 (17-240)||(9797410-9797633)
chr3 (4-238)||(40487301-40487535)
chr3 (58-243)||(51303516-51303701)
chr3 (58-238)||(51923757-51923937)
chr3 (11-238)||(38545782-38546009)
chr3 (4-238)||(10233046-10233280)
chr3 (58-243)||(7546645-7546830)
chr3 (11-224)||(19339159-19339371)
chr3 (10-243)||(43488463-43488696)
chr3 (52-217)||(48199801-48199966)
chr3 (59-243)||(46304393-46304577)
chr3 (4-238)||(10229452-10229686)
chr3 (4-238)||(12149662-12149896)
chr3 (10-238)||(47896134-47896361)
chr3 (4-235)||(45568326-45568557)
chr3 (13-243)||(53807731-53807963)
chr3 (4-238)||(10108212-10108446)
chr3 (12-238)||(21313020-21313246)
chr3 (77-243)||(21431662-21431828)
chr3 (62-243)||(8914746-8914927)
chr3 (11-243)||(21289687-21289926)
chr3 (27-243)||(32701490-32701706)
chr3 (11-239)||(53099773-53099999)
chr3 (132-243)||(4711586-4711697)
chr3 (10-221)||(12050543-12050754)
chr3 (1-243)||(14859463-14859705)
chr3 (11-243)||(47041921-47042154)
chr3 (4-243)||(36461310-36461543)
chr3 (4-243)||(40556688-40556917)
chr3 (11-243)||(38859985-38860225)
chr3 (10-243)||(20608776-20609005)
chr3 (4-243)||(54148967-54149206)
chr3 (52-243)||(628796-628986)
chr3 (61-243)||(16235459-16235641)
chr3 (4-198)||(45424775-45424968)
chr3 (49-243)||(50194208-50194402)
chr3 (58-238)||(27706104-27706284)
chr3 (1-142)||(29239313-29239457)
chr3 (94-243)||(7448787-7448936)
chr3 (94-243)||(7456929-7457078)
chr3 (11-224)||(18011003-18011216)
chr3 (52-209)||(26716014-26716171)
chr3 (58-243)||(42460780-42460964)
chr3 (40-220)||(26275715-26275895)
chr3 (13-243)||(35175386-35175619)
chr3 (133-238)||(46220768-46220873)
chr3 (10-142)||(35864906-35865038)
chr3 (14-246)||(37040755-37040986)
chr3 (4-147)||(43016831-43016974)
chr3 (1-243)||(53508195-53508437)
chr3 (38-243)||(4821817-4822021)
chr3 (2-142)||(12947248-12947391)
chr3 (98-219)||(19619784-19619904)
chr3 (139-243)||(44959846-44959950)
chr3 (14-198)||(45425578-45425762)
chr3 (116-238)||(3085179-3085301)
chr3 (39-222)||(29922068-29922251)
chr3 (39-222)||(29971221-29971404)
chr3 (160-238)||(20987633-20987711)
chr3 (58-243)||(27856194-27856380)
chr3 (179-235)||(43017039-43017095)
chr3 (182-240)||(13458985-13459043)
chr3 (1-238)||(26739235-26739475)
chr3 (58-135)||(7887424-7887501)
chr3 (13-169)||(31271756-31271910)
chr3 (14-89)||(36734687-36734765)
chr3 (62-240)||(52115897-52116072)
chr3 (12-114)||(4396336-4396441)
chr3 (13-124)||(41818194-41818311)
chr3 (162-240)||(7792063-7792141)
chr3 (38-136)||(9211580-9211677)
chr3 (16-89)||(12116101-12116177)
chr3 (50-224)||(44805052-44805225)
chr3 (16-89)||(46934645-46934721)
chr3 (61-126)||(2208869-2208933)
chr3 (179-238)||(12946845-12946904)
chr3 (179-242)||(38142676-38142739)
chr3 (16-93)||(22803025-22803105)
chr3 (50-128)||(32246469-32246547)
chr3 (16-89)||(35499193-35499269)
chr3 (16-89)||(42719520-42719596)
chr3 (179-220)||(9173899-9173940)
chr3 (186-238)||(12116262-12116314)
chr3 (179-243)||(42455693-42455757)
chr3 (16-89)||(3848914-3848990)
chr3 (12-186)||(20987729-20987903)
chr3 (56-106)||(26446938-26446988)
chr3 (16-93)||(36906125-36906205)
chr3 (4-113)||(36910643-36910753)
chr3 (16-89)||(39917393-39917468)
chr3 (16-89)||(49552219-49552295)
chr3 (1-89)||(31794059-31794150)
chr3 (16-88)||(32607472-32607547)
chr3 (189-238)||(35864844-35864893)
chr3 (186-243)||(36906286-36906343)
chr3 (186-243)||(49552077-49552134)
chr3 (1-122)||(1649390-1649513)
chr3 (154-242)||(3656080-3656167)
chr3 (186-238)||(22803194-22803246)
chr3 (186-238)||(25162600-25162652)
chr3 (203-243)||(31271705-31271745)
chr3 (38-90)||(52496937-52496989)
[»] chr1 (111 HSPs)
chr1 (4-238)||(5983816-5984050)
chr1 (4-238)||(14872620-14872853)
chr1 (10-238)||(34878156-34878384)
chr1 (4-249)||(35484258-35484503)
chr1 (10-243)||(27580001-27580234)
chr1 (4-243)||(7836669-7836908)
chr1 (4-247)||(10776330-10776573)
chr1 (30-238)||(44915645-44915853)
chr1 (58-238)||(48750219-48750399)
chr1 (4-243)||(21947491-21947730)
chr1 (4-238)||(32394978-32395212)
chr1 (4-238)||(45415538-45415772)
chr1 (14-247)||(3228259-3228492)
chr1 (10-238)||(23291520-23291748)
chr1 (4-243)||(7337536-7337775)
chr1 (1-243)||(47132877-47133122)
chr1 (58-243)||(36775583-36775768)
chr1 (61-242)||(37720023-37720204)
chr1 (28-229)||(45789545-45789746)
chr1 (13-243)||(49626900-49627132)
chr1 (13-243)||(44543259-44543491)
chr1 (10-243)||(13144685-13144918)
chr1 (94-243)||(15431539-15431688)
chr1 (2-238)||(31317728-31317950)
chr1 (17-243)||(16262851-16263080)
chr1 (40-222)||(18939336-18939518)
chr1 (13-238)||(24582937-24583164)
chr1 (30-243)||(31918994-31919208)
chr1 (110-243)||(31984247-31984380)
chr1 (4-199)||(1742261-1742454)
chr1 (13-243)||(34412965-34413200)
chr1 (77-243)||(29738537-29738703)
chr1 (10-199)||(8211828-8212016)
chr1 (78-235)||(39888236-39888393)
chr1 (78-243)||(49504468-49504633)
chr1 (107-243)||(16989454-16989590)
chr1 (120-238)||(4413210-4413328)
chr1 (5-238)||(12635148-12635384)
chr1 (11-243)||(16161818-16162047)
chr1 (13-238)||(19060896-19061123)
chr1 (16-208)||(51916575-51916761)
chr1 (21-227)||(6217712-6217925)
chr1 (163-240)||(51373734-51373811)
chr1 (179-243)||(24583301-24583365)
chr1 (10-130)||(27456526-27456646)
chr1 (151-238)||(11462360-11462447)
chr1 (10-149)||(21686859-21686998)
chr1 (174-243)||(21687528-21687597)
chr1 (93-158)||(24597282-24597347)
chr1 (110-218)||(15492373-15492481)
chr1 (38-201)||(1602104-1602265)
chr1 (1-138)||(41994401-41994541)
chr1 (12-85)||(940351-940424)
chr1 (1-221)||(9341701-9341923)
chr1 (4-89)||(15434902-15434987)
chr1 (126-238)||(38520393-38520506)
chr1 (109-221)||(5855994-5856106)
chr1 (14-89)||(7312100-7312173)
chr1 (174-222)||(19596354-19596402)
chr1 (179-243)||(32679014-32679078)
chr1 (163-247)||(50377462-50377546)
chr1 (62-217)||(32873763-32873918)
chr1 (164-243)||(41740515-41740594)
chr1 (16-89)||(9172500-9172576)
chr1 (16-89)||(9180482-9180558)
chr1 (16-102)||(11462462-11462548)
chr1 (188-238)||(27456648-27456698)
chr1 (16-89)||(34519142-34519218)
chr1 (16-89)||(35584613-35584689)
chr1 (16-89)||(50166094-50166170)
chr1 (16-89)||(51868640-51868716)
chr1 (182-243)||(34529232-34529293)
chr1 (74-187)||(35461978-35462091)
chr1 (186-238)||(3871579-3871631)
chr1 (16-89)||(30879086-30879161)
chr1 (4-123)||(34528707-34528829)
chr1 (14-89)||(39927549-39927627)
chr1 (51-199)||(43412401-43412549)
chr1 (186-238)||(50165957-50166009)
chr1 (188-243)||(5701432-5701487)
chr1 (51-142)||(49648848-49648939)
chr1 (16-85)||(5324557-5324629)
chr1 (16-85)||(5701269-5701341)
chr1 (16-89)||(7342732-7342808)
chr1 (16-89)||(9687199-9687275)
chr1 (16-89)||(9919399-9919475)
chr1 (16-89)||(19715890-19715966)
chr1 (16-89)||(28035149-28035225)
chr1 (16-85)||(31836817-31836889)
chr1 (14-91)||(44637429-44637509)
chr1 (186-243)||(7997960-7998017)
chr1 (163-224)||(14489411-14489472)
chr1 (186-243)||(25406137-25406194)
chr1 (16-88)||(33291414-33291489)
chr1 (186-243)||(40880866-40880923)
chr1 (13-125)||(41903740-41903855)
chr1 (186-235)||(45425927-45425976)
chr1 (186-243)||(50271993-50272050)
chr1 (15-60)||(52854214-52854259)
chr1 (183-243)||(5600924-5600984)
chr1 (174-242)||(19885152-19885220)
chr1 (18-89)||(25406279-25406353)
chr1 (174-242)||(28053591-28053659)
chr1 (57-89)||(30506199-30506231)
chr1 (107-147)||(32677081-32677121)
chr1 (107-147)||(33291369-33291409)
chr1 (33-89)||(33817176-33817231)
chr1 (33-89)||(33876646-33876701)
chr1 (18-89)||(39987401-39987475)
chr1 (39-127)||(40163418-40163506)
chr1 (10-114)||(50377314-50377418)
[»] chr4 (111 HSPs)
chr4 (14-243)||(2520786-2521015)
chr4 (4-243)||(22611180-22611419)
chr4 (10-234)||(53811031-53811255)
chr4 (4-236)||(56040526-56040758)
chr4 (4-243)||(19853385-19853624)
chr4 (1-243)||(12199567-12199808)
chr4 (12-238)||(32766519-32766745)
chr4 (38-247)||(21662468-21662677)
chr4 (38-247)||(21671232-21671441)
chr4 (4-238)||(33921048-33921285)
chr4 (4-243)||(10496332-10496571)
chr4 (4-243)||(17949197-17949436)
chr4 (4-243)||(17953049-17953288)
chr4 (4-243)||(35348304-35348543)
chr4 (11-238)||(53444122-53444349)
chr4 (16-243)||(24098942-24099167)
chr4 (4-234)||(8670482-8670712)
chr4 (4-238)||(13634112-13634346)
chr4 (13-243)||(52060796-52061026)
chr4 (10-243)||(56156515-56156748)
chr4 (14-238)||(21686120-21686344)
chr4 (1-222)||(52944302-52944526)
chr4 (1-238)||(37030255-37030492)
chr4 (58-243)||(18935833-18936018)
chr4 (58-238)||(31891165-31891345)
chr4 (13-221)||(54021866-54022073)
chr4 (4-243)||(26633544-26633783)
chr4 (4-243)||(27651934-27652179)
chr4 (4-243)||(43510194-43510432)
chr4 (11-247)||(9178357-9178593)
chr4 (4-243)||(28857396-28857637)
chr4 (10-239)||(26090787-26091022)
chr4 (12-238)||(36161713-36161942)
chr4 (11-249)||(44596668-44596902)
chr4 (13-243)||(43095634-43095864)
chr4 (1-238)||(51888089-51888329)
chr4 (58-243)||(36194760-36194944)
chr4 (4-209)||(4142659-4142867)
chr4 (78-243)||(29960822-29960987)
chr4 (94-243)||(47320285-47320434)
chr4 (106-226)||(45418611-45418731)
chr4 (1-147)||(38166199-38166343)
chr4 (13-210)||(10258802-10258999)
chr4 (38-222)||(2069475-2069658)
chr4 (11-243)||(1621384-1621613)
chr4 (109-219)||(29120276-29120386)
chr4 (51-239)||(9048708-9048896)
chr4 (163-240)||(37465638-37465715)
chr4 (38-130)||(4937864-4937956)
chr4 (62-225)||(6155114-6155280)
chr4 (11-124)||(9643389-9643505)
chr4 (38-199)||(22038719-22038880)
chr4 (13-89)||(5119345-5119421)
chr4 (57-243)||(9713962-9714146)
chr4 (120-243)||(48257505-48257628)
chr4 (16-93)||(868180-868260)
chr4 (11-243)||(22300850-22301086)
chr4 (108-242)||(42032403-42032536)
chr4 (58-199)||(33332486-33332627)
chr4 (116-243)||(43853552-43853679)
chr4 (12-114)||(18048885-18048990)
chr4 (160-234)||(7008871-7008945)
chr4 (174-240)||(36184698-36184764)
chr4 (16-93)||(53616641-53616721)
chr4 (3-101)||(7393263-7393365)
chr4 (174-243)||(11299883-11299952)
chr4 (164-221)||(22305516-22305573)
chr4 (3-102)||(55227971-55228073)
chr4 (195-242)||(9643564-9643611)
chr4 (38-209)||(48351093-48351264)
chr4 (16-89)||(4643876-4643952)
chr4 (16-85)||(10389753-10389825)
chr4 (16-89)||(25273901-25273977)
chr4 (16-89)||(47417680-47417756)
chr4 (16-89)||(56194619-56194695)
chr4 (16-88)||(29965653-29965728)
chr4 (108-213)||(36700377-36700482)
chr4 (22-91)||(45418540-45418609)
chr4 (16-88)||(51318003-51318078)
chr4 (12-130)||(11299980-11300095)
chr4 (14-89)||(18138908-18138986)
chr4 (1-96)||(35395690-35395788)
chr4 (14-89)||(49126121-49126199)
chr4 (14-88)||(2624512-2624589)
chr4 (68-123)||(45367058-45367113)
chr4 (183-238)||(47158401-47158456)
chr4 (16-89)||(9528872-9528948)
chr4 (16-89)||(20569273-20569349)
chr4 (14-91)||(35261207-35261287)
chr4 (1-93)||(37683881-37683977)
chr4 (16-89)||(43154009-43154085)
chr4 (16-89)||(43444411-43444487)
chr4 (16-89)||(49410241-49410317)
chr4 (163-237)||(52933828-52933902)
chr4 (14-88)||(3336152-3336230)
chr4 (186-243)||(18138767-18138824)
chr4 (181-222)||(21554684-21554725)
chr4 (174-243)||(35395528-35395597)
chr4 (186-243)||(44947591-44947648)
chr4 (186-243)||(49125980-49126037)
chr4 (186-243)||(53616503-53616560)
chr4 (187-243)||(4644038-4644094)
chr4 (179-243)||(9145764-9145828)
chr4 (186-238)||(10359406-10359458)
chr4 (16-89)||(14183821-14183896)
chr4 (186-238)||(27593687-27593739)
chr4 (203-243)||(29966522-29966562)
chr4 (207-243)||(35261392-35261428)
chr4 (186-238)||(43153872-43153924)
chr4 (38-102)||(52204345-52204409)
chr4 (171-243)||(56335737-56335809)
[»] scaffold0127 (1 HSPs)
scaffold0127 (12-243)||(15476-15708)
[»] scaffold0445 (1 HSPs)
scaffold0445 (4-243)||(1321-1560)
[»] scaffold0603 (1 HSPs)
scaffold0603 (1-238)||(7690-7926)
[»] scaffold0017 (1 HSPs)
scaffold0017 (4-238)||(32625-32859)
[»] scaffold0026 (1 HSPs)
scaffold0026 (4-238)||(71748-71976)
[»] scaffold0049 (1 HSPs)
scaffold0049 (10-240)||(71176-71406)
[»] scaffold0136 (3 HSPs)
scaffold0136 (4-243)||(9915-10154)
scaffold0136 (27-227)||(38053-38255)
scaffold0136 (174-243)||(34635-34704)
[»] scaffold0050 (1 HSPs)
scaffold0050 (4-243)||(65915-66154)
[»] scaffold0634 (1 HSPs)
scaffold0634 (4-238)||(8489-8723)
[»] scaffold0262 (1 HSPs)
scaffold0262 (28-212)||(1723-1907)
[»] scaffold0088 (1 HSPs)
scaffold0088 (96-243)||(50845-50992)
[»] scaffold0121 (1 HSPs)
scaffold0121 (10-238)||(31152-31380)
[»] scaffold0884 (1 HSPs)
scaffold0884 (16-243)||(1846-2073)
[»] scaffold0347 (1 HSPs)
scaffold0347 (1-243)||(6001-6246)
[»] scaffold0009 (1 HSPs)
scaffold0009 (40-243)||(57961-58164)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-225)||(93077-93305)
[»] scaffold0888 (1 HSPs)
scaffold0888 (62-243)||(1551-1732)
[»] scaffold0128 (1 HSPs)
scaffold0128 (100-238)||(36898-37037)
[»] scaffold0042 (1 HSPs)
scaffold0042 (38-158)||(92454-92574)
[»] scaffold0219 (1 HSPs)
scaffold0219 (106-238)||(14749-14880)
[»] scaffold0426 (1 HSPs)
scaffold0426 (16-89)||(6311-6387)
[»] scaffold0095 (1 HSPs)
scaffold0095 (38-124)||(9398-9484)
[»] scaffold0022 (2 HSPs)
scaffold0022 (25-89)||(83433-83500)
scaffold0022 (186-243)||(83289-83348)
[»] scaffold0015 (1 HSPs)
scaffold0015 (38-87)||(4081-4130)
[»] scaffold0014 (1 HSPs)
scaffold0014 (16-84)||(201372-201443)
[»] scaffold0064 (1 HSPs)
scaffold0064 (174-222)||(18976-19024)
[»] scaffold0002 (1 HSPs)
scaffold0002 (14-89)||(453936-454014)


Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 83)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 5348707 - 5348433
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtca 100  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  5348707 ctgagtgcaacattgtgttgttcgttgttttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttggttcctattgaaagatcaatttcaatca 5348608  T
Q  101 attataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatttta 200  Q
    |||| | ||||||| |||||||||||||||||||||||||||||| || |||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  5348607 attacagattcaatcaatgatttgggcgtcgacgttgcagattcgaaaatatgtgtatttcagtgacttagaatttaccatattatttgtaggcatttta 5348508  T
Q  201 ccgttgtatgctattaacttgggtgttgttagtttgtttgcagtttcgctgatgttaaacatgttattgtatctg 275  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  5348507 ccgttgtatgctattaacttggatgttgttagtttgttcgcagtttcactgatgttaaacatgttattgtatctg 5348433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 42978589 - 42978828
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| ||||||||||| ||||||||| |||| |||| |||||||||||||  ||| |||||||||||| |  |||||||||     
T  42978589 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttctcgttttatcgcggtgttcgtttagttcttattgaaagatcgacatcagtcaata 42978688  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  ||||||||||||||| ||||||||||| |||||| |||||||| || |||||||||  |||| |||||||| |||||||||||| |||    
T  42978689 acaaattcaaccaatgatttgggcgtcaacgttgcagatccggaaggatgggtatttcggtgacttaggttttatcatattatatgtaggcattttgccg 42978788  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||||||||||||| |||| ||| ||||    
T  42978789 ttgtatgctattaacttgggtgttgtgagttcgttcgcag 42978828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 4 - 238
Target Start/End: Complemental strand, 37837570 - 37837336
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||  |||||| | |||||||||||||  |||||||||||||||| |  ||||||||||    
T  37837570 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgattttgcgtcttgtcgcggtgttcgtttagttcctattgaaagatcgacatcagtcaatt 37837471  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  ||||||||||||||| ||||||||||| |||||| ||| | || || |||||||||  |||| ||||||| ||||||||||||| |||    
T  37837470 acaaattcaaccaatgatttgggcgtcaacgttgcagatccggaagcatgtgaatttcggtgacttaggttttatcatattacttgtaggcattttgccg 37837371  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    || ||||||||||||||||||| ||| ||||||||    
T  37837370 ttttatgctattaacttgggtgctgtgagtttgtt 37837336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 47590290 - 47590529
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||  ||||||   |||||||| || | ||||||||||||||||| |  || |||||||    
T  47590290 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgattttgcgtcttgccgcggtgtttgtataattcctattgaaagatctacatccgtcaatt 47590389  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  ||||||||||||||| |||||||| || |||||| ||| |||| || | |||||||  |||| ||||||||||||||||||||| |||    
T  47590390 acaaattcaaccaatgatttgggcgtcaacgttgcacatccggaagcatgagtatttcggcgacttaggttttatcatattatttgtaggcattttgccg 47590489  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  47590490 ttgtaagctattaacttgggtgttgtgagtttgtttgcag 47590529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 8001658 - 8001419
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||| |||||||||| ||||||||||| |||||||||  |||||| | | |||||| |||   |||||||||||||||| |  ||| ||||||    
T  8001658 agtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgtggtgtttgttcagttcctattgaaagatctacatcaatcaatt 8001559  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| |||||||||||||||||  ||| |||| || |||||||||  |||| |||||||||| |||||||||| |||    
T  8001558 acaaattcaagcaatgatttggacgtcaacgttgcagattcggaatcatgagtatttcggtgacttaggttttatcatattatttataggcattttgccg 8001459  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||||||||| ||| |||||||| ||||    
T  8001458 ttgtatgctattaacttgggtgctgtgagtttgttcgcag 8001419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 4 - 238
Target Start/End: Complemental strand, 12141420 - 12141185
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||| ||||||| || |||||||||||  ||||||||  |||||| |  ||||||| ||||  ||||||||| |||||| |  ||||||||||    
T  12141420 agtgcggcgttttgttgtttgtcgtcttgtgcggcatttgatttcgcgtcttgtcacggtgtttgtttagttcctattggaagatctacatcagtcaatt 12141321  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| ||||||||||| |||||| |||||||| || |||||||||| |||| ||||||||||||| ||||||| |||    
T  12141320 acaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttagattttatcatattatttgtatgcattttgccg 12141221  T
Q  204 ttgtatgctattaacttggg-tgttgttagtttgtt 238  Q
    |||||||||||||||||||| |||||| ||||||||    
T  12141220 ttgtatgctattaacttgggttgttgtgagtttgtt 12141185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 34899719 - 34899480
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||  | | || | |||||||| |||   ||||| |||||||||| |  ||||||||||    
T  34899719 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgctttttgtcgcggtgtttgttcagttcctcttgaaagatctacatcagtcaatt 34899620  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| |||||||| ||||||||| |||||||| || ||||||||   |||| ||||||||||||| ||||||| |||    
T  34899619 acaaattcaaccaatgatttggacgtcaacgttgcaaattcggaagcatgggtatttcggtgacttaagttttatcatattatttgtatgcattttgccg 34899520  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||||||||||||||| |||||| |||||||| ||||    
T  34899519 ttgtatgctattaacttggatgttgtgagtttgttcgcag 34899480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 238
Target Start/End: Original strand, 46700023 - 46700248
Alignment:
Q  13 ttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattca 112  Q
    ||||||||||||| ||||| ||||| |||||||||  |||||| | | |||||||||||  |||||||||||| ||| |  |||||||| || |||||||    
T  46700023 ttgtgttgttcgtcgtcttctgcggcgtttgatttcacgtcttgtcgtggtgttcgtttagttcctattgaaatatcgacatcagtcaactacaaattca 46700122  T
Q  113 attaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgct 212  Q
    || |||||||||||| ||  |||||||||| |||||| |||| ||| || |||||||||| |||| |||||||||| |||||||||| ||||| ||||||    
T  46700123 atcaatgatttgggcatcagcgttgcagatccggaagcatggatatttcggtgacttagattttatcatattatttataggcattttgccgttatatgct 46700222  T
Q  213 attaacttgggtgttgttagtttgtt 238  Q
    ||||||| ||||||||| ||||||||    
T  46700223 attaactagggtgttgtgagtttgtt 46700248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 10 - 238
Target Start/End: Complemental strand, 9450243 - 9450015
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    |||||||||||||||| ||||||||||| |||||||||  | | || | |||||||| |||   |||||||||||||||| |  ||| ||||||| ||||    
T  9450243 gcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcattttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaat 9450144  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||  |||||||||| |||| ||||||||||| |||||| |||||||| | ||||| ||||  |||| ||||||||||||||||||||| |||||||||    
T  9450143 tcaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtattttagtgatttaggttttatcatattatttgtaggcattttgccgttgtat 9450044  T
Q  210 gctattaacttgggtgttgttagtttgtt 238  Q
    |||||||| || |||||||| ||||||||    
T  9450043 gctattaatttaggtgttgtgagtttgtt 9450015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 39171702 - 39171463
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||| |||||||||| ||||||||| | |||||||||  |||||| |  || |||| |||   |||| ||||||||||| |  ||| ||||||    
T  39171702 agtgctgcgttttgttgttcgtcgtcttgtgcagcgtttgattttacgtcttgtcacgatgtttgttcagttccaattgaaagatctacatcaatcaatt 39171603  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| ||||||||||| |||||| |||||||| || |||||||||  |||| ||||||||||||||||||||| |||    
T  39171602 acaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcattttgccg 39171503  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||||||||| | | |||||||||||||    
T  39171502 ttgtatgctattaacttgggtgctatgagtttgtttgcag 39171463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 12 - 243
Target Start/End: Original strand, 39229002 - 39229231
Alignment:
Q  12 gttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattc 111  Q
    |||||||||||||| ||||||||||| ||| |||||  |||||| ||| | ||| |||||| || ||||||||||||||| |||||||||||| | ||||    
T  39229002 gttgtgttgttcgtcgtcttgtgcggcgttagatttcgcgtcttgttgtgatgt-cgtttggtttctattgaaagatcaacttcagtcaattacagattc 39229100  T
Q  112 aattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgc 211  Q
    ||   |||| |||||||||||||||||||||  ||||| ||| |||| |||| ||||||||||||| ||||| ||||||||||||||| |||||||||||    
T  39229101 aaccgatgacttgggcgtcgacgttgcagatctggaagcatgtgtatttcagggacttagaatttatcatataatttgtaggcatttttccgttgtatgc 39229200  T
Q  212 tattaacttgggtgttgttagtttgtttgcag 243  Q
    | |||| |||| |||||| |||||| ||||||    
T  39229201 t-ttaatttggatgttgtgagtttgcttgcag 39229231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 10 - 243
Target Start/End: Complemental strand, 48316918 - 48316685
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    |||||||||||||||| ||||||||| | |||||||||  |||||| | |||||||| |||   |||||||||||||||| |  ||| ||||||| ||||    
T  48316918 gcgttgtgttgttcgtcgtcttgtgcagcgtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaat 48316819  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||  |||||||||| |||| ||| ||||||| |||||| |||||||| || | || ||||  |||| |||||||||||||||||||||  ||||||||    
T  48316818 tcaagcaatgatttggacgtcaacgctgcagatccggaagcatgggtatttcggcgatttaggttttatcatattatttgtaggcattttgtcgttgtat 48316719  T
Q  210 gctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||| ||| |||||||| ||||    
T  48316718 gctattaacttgggtgctgtgagtttgttcgcag 48316685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 38798767 - 38798999
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaatt 110  Q
    ||||||||||||||| ||||||||||| |||||||||  ||| || | || ||||| ||||  ||||||||||||||||    ||||||||||| |||||    
T  38798767 cgttgtgttgttcgtcgtcttgtgcggcgtttgattttgcgttttgtcgcagtgtttgtttatttcctattgaaagatcggcatcagtcaattacaaatt 38798866  T
Q  111 caattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatg 210  Q
    |||  ||||||||||||||| || ||| |||| |||||| ||| | || || |||||||||| |||| ||||||||||||||||||||| ||||  ||||    
T  38798867 caaccaatgatttgggcgtcaacattgaagatccggaagcatgtgaatttcggtgacttagattttatcatattatttgtaggcattttgccgtcttatg 38798966  T
Q  211 ctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| |||||| |||||||| ||||    
T  38798967 ctattaacttggatgttgtgagtttgttcgcag 38798999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 19296849 - 19297088
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||  | | || | |||||||| |||   ||||| |||||||||| |  ||||||||||    
T  19296849 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcattttgtcgcggtgtttgttcagttcctcttgaaagatctacatcagtcaatt 19296948  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| ||||||||||| |||||| |||||||| || || |||||   |||| ||||||||||||||||||||| | |    
T  19296949 acaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtaacttaagttttatcatattatttgtaggcattttgctg 19297048  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    || ||||||||||| ||||||||||| |||||||| ||||    
T  19297049 ttatatgctattaatttgggtgttgtgagtttgttcgcag 19297088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 243
Target Start/End: Complemental strand, 45349905 - 45349672
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    |||||||||||||||| || ||||| || |||||||||  |||||| | |||||||||||||  |||||||||||||||     ||||||||||| ||||    
T  45349905 gcgttgtgttgttcgtcgttttgtgtggcgtttgatttcgcgtcttgtcgcggtgttcgtttagttcctattgaaagattggcatcagtcaattacaaat 45349806  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||  |||||||| |||||| || ||||||||  ||||| ||| | || || |||| ||||  |||| ||||||||||||||||||||| ||||| |||    
T  45349805 tcaagcaatgattttggcgtcaacattgcagatctggaagcatgtgaatttcggtgatttaggttttatcatattatttgtaggcattttgccgttttat 45349706  T
Q  210 gctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||||||| |||||||| ||||    
T  45349705 gctattaacttgggtgttgtgagtttgttcgcag 45349672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 26623905 - 26623662
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttca-gtc 99  Q
    |||||||| |||||||||||||||| ||||||| ||| |||||||||  | |||| |||||||||| ||||| |||||||||||||||||| |||| |||    
T  26623905 ctgagtgcggcgttgtgttgttcgtcgtcttgtacggcgtttgattttgcatcttgttgcggtgtttgtttggttcctattgaaagatcaacttcaggtc 26623806  T
Q  100 aattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatttt 199  Q
    ||||  | |||||||||||||| ||||||| ||  ||||| || |||||| ||| |||| || ||| |||| |||||| ||||||| || ||||||||||    
T  26623805 aattgcatattcaattaatgatatgggcgtggatattgcaaatccggaagcatgagtatttcggtggcttataatttatcatattagttttaggcatttt 26623706  T
Q  200 accgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
      |||| ||| ||||||||||| | ||||| |||||||| ||||    
T  26623705 gtcgttctatactattaacttgagcgttgtgagtttgttcgcag 26623662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 28476206 - 28476444
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttat----tgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||||||||||||| |||||||||||   ||||||||||  | |||| |    ||||||||||||||| ||| |||||||||||||  ||||| ||||     
T  28476206 cgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatc 28476305  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||| | ||||||||||||||| ||||||||||| | ||||||||||||| || |||| ||||| |||| ||||||||||||||||||||| |||    
T  28476306 acaaattcattcaatgatttgggcgtcaacgttgcagatccagaagtatgggtat-tcggtgatttagattttatcatattatttgtaggcattttgccg 28476404  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |   ||| |||||||||| ||| ||| |||||||||||||    
T  28476405 tgcaatgttattaacttgagtgctgtgagtttgtttgcag 28476444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 19404869 - 19404630
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||| | |||||||| |||||||||   |||||||||  | |||| | ||||||||| |||  ||||| |||||||||  |  || |||||||    
T  19404869 agtgcggcgttctattgttcgtcgtcttgtgcatcgtttgattttgcatcttgtcgcggtgttcttttagttcctcttgaaagattgacatctgtcaatt 19404770  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||| ||||||||||||||| | ||||||||| |||||| ||| |||| ||||||||||||| |||| |||||||||||||||| |||| |||    
T  19404769 acaaattcaatcaatgatttgggcgtcaatgttgcagatccggaagcatgagtatttcagtgacttagattttatcatattatttgtaggctttttgccg 19404670  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||| | ||||||||||||| || ||| |||||||| ||||    
T  19404669 ttgcacgctattaacttggatgctgtgagtttgttcgcag 19404630  T

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Target: chr7; HSP #19
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 16 - 243
Target Start/End: Original strand, 48061413 - 48061640
Alignment:
Q  16 tgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaatt 115  Q
    |||||||||| ||||| ||||  |||||||||  |||||| | |||||||| ||||  |||||||||||||||| |  | ||||||||| ||||||||      
T  48061413 tgttgttcgtcgtcttatgcgacgtttgattttgcgtcttgtcgcggtgtttgtttagttcctattgaaagatctacattagtcaattacaaattcaacc 48061512  T
Q  116 aatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctatt 215  Q
    |||| |||| ||||| ||||||||||| |  ||| ||| |||| || |||| ||||  |||| ||||||||||||||||||||| |||||||||||||||    
T  48061513 aatggtttgagcgtcaacgttgcagatccttaagcatgagtatttcggtgatttaggttttatcatattatttgtaggcattttgccgttgtatgctatt 48061612  T
Q  216 aacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| | |||||||| ||||    
T  48061613 aacttgggtgttatgagtttgttcgcag 48061640  T

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Target: chr7; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 25255203 - 25255445
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtca 100  Q
    |||||||| |||||||||| ||||  ||||||||| | |||||||||   ||||  ||||||||||| |||  ||||||| ||||  |||| |||| |||    
T  25255203 ctgagtgcggcgttgtgttattcgccgtcttgtgcagcgtttgatttcatgtctcgttgcggtgttcatttagttcctatcgaaatgtcaacttcaatca 25255302  T
Q  101 attataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatttta 200  Q
    |||||| ||||||| ||| |||||||| |||| ||||||||| | |||| ||||| || | ||||||||||| ||||  |||| |||||||||||||||     
T  25255303 attatagattcaatcaattatttgggcatcgatgttgcagatcctgaagcatgggcattttagtgacttagagtttataatatcatttgtaggcattttg 25255402  T
Q  201 ccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
     ||||||||||||||||||| | |||||| |||||||| ||||    
T  25255403 tcgttgtatgctattaacttagatgttgtgagtttgttcgcag 25255445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 61 - 243
Target Start/End: Original strand, 35132983 - 35133165
Alignment:
Q  61 ggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgt 160  Q
    |||||||||||| ||| |||||||||||||| ||||| |||| | ||||||||| ||||||||||||||| ||||||||||| |  ||| ||| ||||      
T  35132983 ggtgttcgtttggttcgtattgaaagatcaacttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccaaaagcatgagtattc 35133082  T
Q  161 cagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
     ||||| ||||| || | |||||||||| |||||||||| ||||||||||||||||||||||||| ||| |||||||| ||||    
T  35133083 tagtgatttagatttcatcatattatttctaggcattttgccgttgtatgctattaacttgggtgatgtgagtttgttcgcag 35133165  T

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Target: chr7; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 243
Target Start/End: Complemental strand, 39328896 - 39328666
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    |||||||||||||||| ||||||||||| |||||||||  ||| || | |||||||| ||||  ||||||||||||||||    ||||||||||| ||||    
T  39328896 gcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgtttatttcctattgaaagatcggcatcagtcaattacaaat 39328797  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||  ||||||||||||||| |||||| |||| || ||| ||| | || || |||||||||  |||| ||   |||||||||||||||| ||||| |||    
T  39328796 tcaaccaatgatttgggcgtcaacgttgaagatccgaaagcatgtgaatctcggtgacttaggttttatca---tatttgtaggcattttgccgttttat 39328700  T
Q  210 gctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||| ||| | |||||| ||||    
T  39328699 gctattaacttgggtgctgtgaatttgttcgcag 39328666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 41553552 - 41553328
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtg---cggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcag 97  Q
    ||||||||| ||||||||||||||| ||||||||   || | ||||||||  |||||| ||  |||||||||||| ||| ||||||||||||||||||||    
T  41553552 ctgagtgcaacgttgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaagatcaatttcag 41553453  T
Q  98 tcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatt 197  Q
    ||||| | | ||||| |||||||||||| |||| ||||||||||| |||||  || | ||| |  |||| ||||| |||| ||||| |||| || | |||    
T  41553452 tcaatcacatattcagttaatgatttggacgtcaacgttgcagatccggaaacatagatattttggtgatttagattttatcatatcatttatacgtatt 41553353  T
Q  198 ttaccgttgtatgctattaacttgg 222  Q
    || ||||||||||||||||||||||    
T  41553352 ttgccgttgtatgctattaacttgg 41553328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 24069512 - 24069290
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcggtgttt---gatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcag 97  Q
    |||||||| |||||||||||||||||||||||||||| ||||   |||||  ||| || |||||||||||||||||||| |||||||| ||||  |||      
T  24069512 ctgagtgcggcgttgtgttgttcgttgtcttgtgcggcgttttttgatttggcgtattgttgcggtgttcgtttgattcatattgaaatatcagcttcga 24069413  T
Q  98 tcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatt 197  Q
    ||||| | |  |||||| |||||||||  |||| ||||||||||  |||||| ||| | ||    |||| ||||| |||| |||||||||||||||||||    
T  24069412 tcaatcacaggttcaatcaatgatttgaacgtcaacgttgcagacccggaagcatgaggattctggtgatttagattttatcatattatttgtaggcatt 24069313  T
Q  198 ttaccgttgtatgctattaactt 220  Q
    ||| |||||||||||||||||||    
T  24069312 ttatcgttgtatgctattaactt 24069290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 238
Target Start/End: Complemental strand, 13797044 - 13796807
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgt---cttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtca 100  Q
    ||||| |||||||||||||||||||   ||||||||  |||||||||   ||||| |  ||||||||||||  ||| |||||||||||| |  |||||||    
T  13797044 agtgcggcgttgtgttgttcgttgtgatcttgtgcgacgtttgatttcgtgtcttgtctcggtgttcgtttagttcatattgaaagatcgacatcagtca 13796945  T
Q  101 attataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatttta 200  Q
    || | ||| ||||  |||||||||  |||| ||||||||||| |||||| ||| |||| |  ||||||||   |||| |||||||||||||||||||||     
T  13796944 ataacaaagtcaaccaatgatttgaccgtcaacgttgcagatccggaagcatgagtatttaggtgacttaagttttatcatattatttgtaggcattttg 13796845  T
Q  201 ccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
     ||||||||||||||||||||| |||||| ||||||||    
T  13796844 tcgttgtatgctattaacttggatgttgtgagtttgtt 13796807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 30756931 - 30756692
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||  ||| || | |||||||| |||   || ||||||||||||| |  ||||||||||    
T  30756931 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgttcagtttctattgaaagatctacatcagtcaatt 30756832  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  ||| |||||| | || ||||||||||| |||||| ||| |||| || ||||||||   |||| |||||||||| ||||||||||  ||    
T  30756831 acaaattcaaccaataatttggacatcaacgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttataggcattttgtcg 30756732  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    || |||||| ||||||| |||||||| |||| ||| ||||    
T  30756731 ttttatgctgttaacttaggtgttgtaagttagttcgcag 30756692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 9977318 - 9977097
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||||||||||| |||||||| |||||||  || |||||||||  |||||| | |||||| || |||  |||||||||||||||| | |||||||||||    
T  9977318 agtgcagcgttgtattgttcgtcgtcttgtttggcgtttgatttcgcgtcttgtcgcggtgctcatttagttcctattgaaagatcgacttcagtcaatt 9977219  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  ||||||||||||||| |||||    || ||||| |||| |||| |   ||| ||||| |||| |||||||||| ||| ||||||  ||    
T  9977218 acaaattcaaacaatgatttgggcgtcaacgtt----atccggaattatgtgtattttgatgagttagattttatcatattatttttagacattttgtcg 9977123  T
Q  204 ttgtatgctattaacttgggtgttgt 229  Q
    ||||||||||||||||||| ||||||    
T  9977122 ttgtatgctattaacttggatgttgt 9977097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 40 - 238
Target Start/End: Complemental strand, 28044832 - 28044634
Alignment:
Q  40 tttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgca 139  Q
    |||||||| ||||||| | |||||||| |||   ||| |||||||||||| || ||| ||||||||||||||||  | |||||||  |||| ||||||||    
T  28044832 tttgatttctcgtcttgtcgcggtgtttgttcagttcttattgaaagatctatatcaatcaattataaattcaagcattgatttgaacgtcaacgttgca 28044733  T
Q  140 gattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    ||| |||||  |||||||| || |||| ||||  |||| |||||||||| ||| |||||| |||||||||||||||||||||| |||| | ||||||||    
T  28044732 gatccggaaacatgggtatttcggtgatttaggttttatcatattatttttagacattttgccgttgtatgctattaacttggatgttatgagtttgtt 28044634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 74 - 243
Target Start/End: Original strand, 40993206 - 40993375
Alignment:
Q  74 ttcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaa 173  Q
    |||||||||||||||| |  ||||||||||| ||||||||  || |||||||   || |||||||| |||| |||| |||||||| || ||||||||       
T  40993206 ttcctattgaaagatctacatcagtcaattacaaattcaacaaaagatttggatttcaacgttgcatattcagaagcatgggtatttcggtgacttaagt 40993305  T
Q  174 tttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||| |||||||||||||||||||||  ||||||||| |||||||||||||||||| |||||||| ||||    
T  40993306 tttatcatattatttgtaggcattttgtcgttgtatgttattaacttgggtgttgtgagtttgttcgcag 40993375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 58 - 228
Target Start/End: Original strand, 22742977 - 22743147
Alignment:
Q  58 tgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggta 157  Q
    ||||| ||||||||| ||| |||||||||||||  ||||| |||| | ||||||||| ||||||||| ||||| ||||||||||| | |||| ||| |||    
T  22742977 tgcggcgttcgtttggttcgtattgaaagatcagcttcagccaatcacaaattcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgagta 22743076  T
Q  158 tgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttg 228  Q
    |    |||| ||||| || | |||||||||||| |||||||| ||||||||||||||||| ||||||||||    
T  22743077 ttctggtgatttagatttcatcatattatttgttggcattttgccgttgtatgctattaatttgggtgttg 22743147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 50 - 243
Target Start/End: Original strand, 11343835 - 11344027
Alignment:
Q  50 cgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaag 149  Q
    |||||| |||||||||| ||||| ||| ||||||||||| || |||||||||||| ||||| |||||||||||||| |||| |||||||||| || |||     
T  11343835 cgtcttgttgcggtgtttgtttggttcatattgaaagattaaattcagtcaattacaaatttaattaatgatttggacgtcaacgttgcaga-tccgaaa 11343933  T
Q  150 tatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
     ||| |||| |  |||| ||| | ||||| |||||||||||||| |||||   |||||||||||||||||| |||||  | ||||||| |||||    
T  11343934 aatgagtattttggtgatttatattttacaatattatttgtaggtattttgatgttgtatgctattaacttaggtgtcttaagtttgtatgcag 11344027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 10 - 229
Target Start/End: Complemental strand, 25287292 - 25287073
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    |||||||||||||||| ||||||||||   ||||||||  | |||| | ||||||||| |||  ||| |||||||||||  |  ||| ||||||| ||||    
T  25287292 gcgttgtgttgttcgtcgtcttgtgcgacatttgatttcacatcttgtcgcggtgttcatttacttcttattgaaagattgacatcaatcaattacaaat 25287193  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||| ||||||||| ||||| |  || |||||  | ||| |||| ||| || |||||||||| |||| |||||||||||||| |||||| | |||||||    
T  25287192 tcaatcaatgatttgagcgtcaatattacagatctgaaagcatggatatttcggtgacttagattttatcatattatttgtagccattttgctgttgtat 25287093  T
Q  210 gctattaacttgggtgttgt 229  Q
    |||||||||| || ||||||    
T  25287092 gctattaactcggatgttgt 25287073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 22087303 - 22087429
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaatt 110  Q
    ||||||||||| ||||||||||| || ||||||||||   ||||| |||| ||||| ||||||| |||||||||||||||| |||||||||||| |||||    
T  22087303 cgttgtgttgtccgttgtcttgtacgatgtttgatttcgtgtcttgttgctgtgtttgtttgatacctattgaaagatcaacttcagtcaattacaaatt 22087402  T
Q  111 caattaatgatttgggcgtcgacgttg 137  Q
    |||| ||||| ||||| ||| ||||||    
T  22087403 caatcaatgacttgggtgtcaacgttg 22087429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 41553897 - 41553753
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtg---cggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcag 97  Q
    ||||||||| ||||||||||||||| ||||||||   || | ||||||||  |||||| ||  |||||||||||| ||| ||||||||||||||||||||    
T  41553897 ctgagtgcaacgttgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaagatcaatttcag 41553798  T
Q  98 tcaattataaattcaattaatgatttgggcgtcgacgttgcagat 142  Q
    ||||| | | ||||| |||||||||||| |||| |||||||||||    
T  41553797 tcaatcacatattcagttaatgatttggacgtcaacgttgcagat 41553753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 4 - 238
Target Start/End: Complemental strand, 3267324 - 3267095
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||| |||||||||| ||||||||||  |||||||||  ||||||||  |||||||||||| |||| |||||||||||| | | |||||||||    
T  3267324 agtgcggcgttttgttgttcgtcgtcttgtgcgacgtttgatttcgcgtcttatcacggtgttcgtttaattcatattgaaagatcgactccagtcaatt 3267225  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | |     ||| |||||||| |||||| || ||||| || || ||| ||||  || || |||||||| | |||| |||| ||||| ||||||| ||||||    
T  3267224 aca-----aatcaatgatttaggcgtcaacattgcacatccgaaagcatggagatttcggtgacttatattttatcatactatttttaggcatgttaccg 3267130  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtt 238  Q
     | |||||||||||||| |  ||||| ||||||||    
T  3267129 ctatatgctattaacttagaagttgtgagtttgtt 3267095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 221
Target Start/End: Original strand, 24770233 - 24770442
Alignment:
Q  12 gttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattc 111  Q
    |||||||||||||| ||||| ||||  |||||||||   ||||| | |||||||||||||  ||| ||||||||||||    ||||||||| | ||||||    
T  24770233 gttgtgttgttcgtcgtcttatgcgacgtttgatttcgtgtcttgtcgcggtgttcgtttatttcttattgaaagatcggcatcagtcaatcacaaattc 24770332  T
Q  112 aattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgc 211  Q
    ||  ||||||||||||||| |||||| |||| | |||| ||| | || || | |||||||  |||| ||||||||| |||| |||||| ||||| ||||     
T  24770333 aaccaatgatttgggcgtcaacgttgaagatccagaagcatgtgaatttcggagacttaggttttatcatattattggtagacattttgccgttttatgt 24770432  T
Q  212 tattaacttg 221  Q
    ||||||||||    
T  24770433 tattaacttg 24770442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 238
Target Start/End: Complemental strand, 35665194 - 35665013
Alignment:
Q  57 ttgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggt 156  Q
    ||||||| |||||||||||| ||| |||||||||| ||||||| || | | ||||||| |||||||||  |||| | ||||||||  |  ||| ||| ||    
T  35665194 ttgcggtattcgtttgattcatatcgaaagatcaacttcagtcgatcagagattcaatcaatgatttgaacgtcaatgttgcagacccataagcatgtgt 35665095  T
Q  157 atgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    || | ||||| ||||| |||| |||||||||| | ||||||||  |||||||||||||||||||||||  ||| ||||||||    
T  35665094 attttagtgatttagattttatcatattattttttggcattttgtcgttgtatgctattaacttgggtactgtgagtttgtt 35665013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 41554242 - 41554101
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtg---cggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcag 97  Q
    ||||||||| ||||||||||||||| ||||||||   || | ||||||||  |||||| ||  |||||||||||| ||| |||||||| |||||||||||    
T  41554242 ctgagtgcaacgttgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaatatcaatttcag 41554143  T
Q  98 tcaattataaattcaattaatgatttgggcgtcgacgttgca 139  Q
    ||||| | | ||||| |||||||||||| |||| ||||||||    
T  41554142 tcaatcacatattcagttaatgatttggacgtcaacgttgca 41554101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 38 - 208
Target Start/End: Complemental strand, 38880656 - 38880485
Alignment:
Q  38 tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttg 137  Q
    ||||||||||  | |||| |||||||||||||||| ||| |||||||||||||  |||||||||| | ||||||||| ||||||||||| | | ||||||    
T  38880656 tgtttgattttgcatcttgttgcggtgttcgtttggttcttattgaaagatcagcttcagtcaatcacaaattcaatcaatgatttgggtgccaacgttg 38880557  T
Q  138 cagattcggaagtatgggtatgtcagtgacttagaatttaccata-ttatttgtaggcattttaccgttgta 208  Q
    |||||  ||||| ||| |||| | ||| | ||||| |||| |||| |||| ||||| ||||||  |||||||    
T  38880556 cagatctggaagcatgcgtattttagttatttagattttatcatacttatctgtagacattttgtcgttgta 38880485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 48930798 - 48930925
Alignment:
Q  116 aatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctatt 215  Q
    ||||||||||| ||| ||||||||||| | |||  || |||||    |||| ||||| || | |||||||||||| |||||||| |||||||||||||||    
T  48930798 aatgatttgggtgtcaacgttgcagatccagaaacattggtattctggtgatttagatttcatcatattatttgttggcattttgccgttgtatgctatt 48930897  T
Q  216 aacttgggtgttgttagtttgtttgcag 243  Q
    ||||||||| |||| |||||||| ||||    
T  48930898 aacttgggtattgtgagtttgttcgcag 48930925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 196
Target Start/End: Original strand, 5792777 - 5792967
Alignment:
Q  6 tgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattat 105  Q
    ||||| ||||||||||| ||  |||||||||  |||||||||  |||||| |  | ||||||||||  |||||||||||||||| |  |||||||||||     
T  5792777 tgcagtgttgtgttgttagtcatcttgtgcgacgtttgatttcgcgtcttgtcacagtgttcgtttagttcctattgaaagatcgacatcagtcaattac 5792876  T
Q  106 aaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcat 196  Q
    || || ||| |||||||||| |||| |||||||||||  ||||| ||  | || ||  ||||||| | |||| |||||||||| |||||||    
T  5792877 aagttaaatcaatgatttggacgtcaacgttgcagatctggaagcataagaatttcgatgacttatattttatcatattatttataggcat 5792967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 243
Target Start/End: Complemental strand, 29617778 - 29617573
Alignment:
Q  38 tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcga-cgtt 136  Q
    ||||||||||  |||||| |||  ||||| ||||||||| |||||||||||||| || || |||||| | ||| ||| | | ||||  ||||||| ||||    
T  29617778 tgtttgatttcgcgtcttgttgtagtgtttgtttgattcgtattgaaagatcaactttagacaattacagattaaatcagtaatttatgcgtcgaacgtt 29617679  T
Q  137 gcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttg 236  Q
    | | ||  ||||  |||||||| ||  | ||||||| |||| |||||||||||||| ||||||   ||||  |||||||||||| |||||||| ||||||    
T  29617678 gaaaatatggaaacatgggtatttcgatcacttagattttatcatattatttgtagacattttgttgttgagtgctattaactt-ggtgttgtgagtttg 29617580  T
Q  237 tttgcag 243  Q
    |||||||    
T  29617579 tttgcag 29617573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 62 - 158
Target Start/End: Complemental strand, 24350891 - 24350797
Alignment:
Q  62 gtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtat 158  Q
    ||||||||||| ||| |||||||||||||  ||||  |||| | ||||||||| ||||||||||||||| ||||||||||| | |||| ||||||||    
T  24350891 gtgttcgtttggttcgtattgaaagatcagcttca--caatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtat 24350797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 28407860 - 28407791
Alignment:
Q  174 tttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||| |||||||||||||| |||||| |||||||||||||||||||||| || ||| |||||||| ||||    
T  28407860 tttatcatattatttgtagacattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcag 28407791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 3398327 - 3398387
Alignment:
Q  162 agtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgg 222  Q
    ||||| ||||| |||| |||||||||| ||||||||||||||||||||| |||||||||||    
T  3398327 agtgatttagattttatcatattatttttaggcattttaccgttgtatgttattaacttgg 3398387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 142
Target Start/End: Original strand, 27997118 - 27997205
Alignment:
Q  52 tcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagat 142  Q
    |||| |||| ||||||||||||||| |||||||||||||| ||   ||||||||||||| | | ||||||||||||||  |||||||||||    
T  27997118 tcttgttgcagtgttcgtttgattcatattgaaagatcaactt---tcaattataaattaagtcaatgatttgggcgtgaacgttgcagat 27997205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 969556 - 969459
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatta 104  Q
    |||||||||||||||| ||||| |||||   ||||||||||  ||||||||||||||||| ||||| ||| |||||||| ||||  || |||||||||    
T  969556 gcgttgtgttgttcgtcgtcttttgcggcgttgtttgattttgcgtcttattgcggtgtttgtttggttcatattgaaaaatcatctttagtcaatta 969459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 228
Target Start/End: Complemental strand, 5000076 - 4999917
Alignment:
Q  69 tttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgact 168  Q
    |||| ||| |||| ||| |||||||||||||||||| ||||||||| ||| |||||| | || ||||||| |||  ||||| |||  |||    |||| |    
T  5000076 tttggttcatattaaaatatcaatttcagtcaattacaaattcaatcaattatttggacttcaacgttgctgatctggaagcatgaatattctggtgatt 4999977  T
Q  169 tagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttg 228  Q
    || | |||| |||||||||| ||| ||||||  ||||||||| |||| ||||||||||||    
T  4999976 taaattttatcatattatttatagacattttttcgttgtatgttattgacttgggtgttg 4999917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 1448901 - 1448825
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| || ||||||||   |||||||||| ||||||| ||||||||||| |||||||| ||||||||||||    
T  1448901 tgttgttcgtcgtattgtgcggcgttgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaaagatc 1448825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 20116588 - 20116664
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| ||||||||||    ||||||||||| |||||| ||||||||||| |||||||| ||||||||||||    
T  20116588 tgttgttcgtcgtcttgtgcgtcgttgtttgatttaccgtcttcttgcggtgttcatttgattcatattgaaagatc 20116664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 23786581 - 23786657
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| ||||| |||||   |||||||||| ||||||| ||||||||||| |||||||| ||||||||||||    
T  23786581 tgttgttcgtcgtcttctgcggcgttgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaaagatc 23786657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 238
Target Start/End: Complemental strand, 31482173 - 31481977
Alignment:
Q  38 tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttg 137  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||||| | ||  |||| |||||   |  |||||| |||||||| |||||| || |||    
T  31482173 tgtttgatttcacgtcttattgcggtgttcgtttgatttctattgaaaaaacagcttcactcaat--cactttcaatcaatgattt-ggcgtcaacattg 31482077  T
Q  138 cagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgt 237  Q
    || ||  ||||  |||  |||   ||||| |||  ||||| ||| |||||| || | ||||| |||||||||||||||||||||||||||||  ||||||    
T  31482076 catatatggaaacatgaatattcgagtgattta-tatttatcatgttatttataagtattttgccgttgtatgctattaacttgggtgttgtatgtttgt 31481978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 42067132 - 42067061
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaa 84  Q
    |||||||||| |||||||||||   |||||||||| ||||||| ||||||||||| |||||||| |||||||    
T  42067132 tgttgttcgtcgtcttgtgcggcgctgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaa 42067061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 123
Target Start/End: Complemental strand, 3224517 - 3224403
Alignment:
Q  12 gttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaa 108  Q
    |||||||||||||| ||||||||||    | ||||||||  ||| || ||||| |||||||||| ||| ||||||| |||||| |||||||||| |   |    
T  3224517 gttgtgttgttcgtagtcttgtgcgacattatttgatttcacgttttgttgcgatgttcgtttggttcatattgaaggatcaacttcagtcaatcacgga 3224418  T
Q  109 ttcaattaatgattt 123  Q
    |||||||||||||||    
T  3224417 ttcaattaatgattt 3224403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 17773462 - 17773414
Alignment:
Q  179 catattatttgtaggcattttaccgttgtatgctattaacttgggtgtt 227  Q
    ||||||||||||| ||||||||| |||||||||||||||||| ||||||    
T  17773462 catattatttgtaagcattttactgttgtatgctattaactttggtgtt 17773414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 27341705 - 27341768
Alignment:
Q  180 atattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||||||| ||||| |||||||||||||| | |||| | |||||||| ||||    
T  27341705 atattatttgtaggcattttgccgttatatgctattaactttgatgttataagtttgttagcag 27341768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 6002027 - 6002107
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatt 93  Q
    |||||||||| |||||||||||   |||||||||| |||| |  | ||||||||| |||||||| ||||||||||||||||    
T  6002027 tgttgttcgtcgtcttgtgcggcgttgtttgatttctcgtatcgtcgcggtgttcatttgattcatattgaaagatcaatt 6002107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 22927941 - 22927865
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||   |||||| |||  |||||| ||||||||||| ||| |||||||||||||||||    
T  22927941 tgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatc 22927865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 31235863 - 31235783
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatt 93  Q
    |||||||||| ||||||||| |   |||||||||| |||| |  ||||||||||| |||||||| ||||||||||||||||    
T  31235863 tgttgttcgtcgtcttgtgcagcgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaaagatcaatt 31235783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 35667303 - 35667227
Alignment:
Q  16 tgttgttcgttgtcttgtgcggtgttt---gatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| ||||||||||| ||||   |||||  |||||| ||||||||||| |||||||| ||||||||||||    
T  35667303 tgttgttcgtcgtcttgtgcggcgttttttgattttccgtcttcttgcggtgttcatttgattcatattgaaagatc 35667227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 238
Target Start/End: Complemental strand, 46822690 - 46822621
Alignment:
Q  168 ttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    ||||| |||| |||||||||||||| ||||||  | ||||||||||||||||||| |||||| ||||||||    
T  46822690 ttagattttatcatattatttgtag-cattttgtcattgtatgctattaacttggatgttgtgagtttgtt 46822621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 35261464 - 35261521
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| | |||||||||||||||||||||| | |||| |||||||| ||||    
T  35261464 tttgtaggcattatgccgttgtatgctattaacttggatattgtgagtttgttcgcag 35261521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 25068058 - 25068147
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcggtgtttg---atttatcgtcttattgcggtgttcgtttgattcctattgaaagat 88  Q
    |||||||| |||||||||||||||| | ||||||||||||||    ||||  | |||| |||||||||||||||  |||||||||||||||    
T  25068058 ctgagtgcggcgttgtgttgttcgtcg-cttgtgcggtgtttttttattttgcatcttgttgcggtgttcgttttgttcctattgaaagat 25068147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 32522000 - 32521918
Alignment:
Q  14 tgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatt 93  Q
    ||||||||||||  ||||||||||   ||||||||||  ||| || ||| ||||||| |||||||| ||||||||||||||||    
T  32522000 tgtgttgttcgtcatcttgtgcggcgttgtttgattttccgttttgttgtggtgttcatttgattcatattgaaagatcaatt 32521918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 185
Target Start/End: Original strand, 4530081 - 4530236
Alignment:
Q  30 ttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgt 129  Q
    ||||| || |||||||||  |||||| |||||||||||  ||  || || |||||||||||| |||||||| ||| |||||||||  | ||||| |||||    
T  4530081 ttgtgtggcgtttgattttgcgtcttgttgcggtgttcaattagttactgttgaaagatcaacttcagtcagttacaaattcaatccaagatttaggcgt 4530180  T
Q  130 cgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatatta 185  Q
      |||||| | || | |||| |||||||| |  || ||||||| |||| |||||||    
T  4530181 aaacgttggatatccagaagcatgggtatttttgtaacttagattttatcatatta 4530236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 152
Target Start/End: Complemental strand, 28062262 - 28062187
Alignment:
Q  77 ctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtat 152  Q
    ||||||||||||| |  ||| ||||||||||||||||  |||||||||| |||| | ||||||||| || ||||||    
T  28062262 ctattgaaagatctacatcaatcaattataaattcaagcaatgatttggacgtcaatgttgcagatccgaaagtat 28062187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 49148070 - 49148011
Alignment:
Q  161 cagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaactt 220  Q
    ||||||||| || |||| ||||||| |||| ||||||||  |||||||||||||||||||    
T  49148070 cagtgacttggattttatcatattaattgttggcattttgtcgttgtatgctattaactt 49148011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 433762 - 433686
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||||||||||||| |   |||||| ||| ||||||| || | |||||| ||| |||||||||||||||||    
T  433762 tgttgttcgttgtcttgtgcagcgttgtttgctttctcgtcttcttacagtgttcattttattcctattgaaagatc 433686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 14627950 - 14627874
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| || ||||||||   |||||||||| |||||||| | |||||||  |||||||| ||||||||||||    
T  14627950 tgttgttcgtcgtattgtgcggcgttgtttgatttctcgtcttagtacggtgtttatttgattcatattgaaagatc 14627874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 32684674 - 32684746
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaa 85  Q
    |||||||||| |||||||||||   ||||||||||  ||||||  |||||||||| |||||||| ||||||||    
T  32684674 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaa 32684746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 46339060 - 46339136
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||   ||||||||||  ||||||  | |||||||| |||||||| ||||||||||||    
T  46339060 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtacggtgttcatttgattcatattgaaagatc 46339136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 433601 - 433544
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| | | ||| |||||||||||||||| |||||| |||||||| ||||    
T  433601 tttgtaggcattatgctgttatatgctattaacttggatgttgtgagtttgttcgcag 433544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 17222910 - 17222853
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| | ||||| ||||||| |||||||| |||||| |||||||| ||||    
T  17222910 tttgtaggcattatgccgttatatgctagtaacttggatgttgtgagtttgttcgcag 17222853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 243
Target Start/End: Complemental strand, 26610785 - 26610653
Alignment:
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||| ||||||||||||| |||  |||||||| |||||  |||| ||| |  |||||||| |||||| |||||||||| |   |||||| ||| |||||    
T  26610785 tcaatcaatgatttgggcgccgatattgcagatccggaaacatggttatttgggtgacttataatttatcatattatttcttcacatttttccg-tgtat 26610687  T
Q  210 gctattaacttgggtgttgttagtttgtttgcag 243  Q
     |||||||||| |||  ||| |||||||| ||||    
T  26610686 actattaactttggtactgtgagtttgttcgcag 26610653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 34773878 - 34773935
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| || |||| ||| |||||||||||| || ||| |||||||||||||    
T  34773878 tttgtaggcattatatcgttatatactattaacttggatgctgtgagtttgtttgcag 34773935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 46822182 - 46822239
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| | ||||| |||||||||||||||| || ||| |||||||| ||||    
T  46822182 tttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcag 46822239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 1749200 - 1749140
Alignment:
Q  63 tgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgattt 123  Q
    |||||||||| ||| |||||||||||||  ||||| |||| | ||||||||| ||||||||    
T  1749200 tgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgattt 1749140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 21266557 - 21266609
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||| | ||||| |||||||||||||||| || ||| ||||||||    
T  21266557 tttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgtt 21266609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 24610236 - 24610160
Alignment:
Q  50 cgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttggg 126  Q
    |||||| |||||||||||||||  ||| |||| ||| |||| |||||||| || | | ||||||| |||||||||||    
T  24610236 cgtcttgttgcggtgttcgtttagttcatattaaaatatcagtttcagtcgatcacagattcaatcaatgatttggg 24610160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 31235694 - 31235642
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||| | ||||| |||||||||||||||| || ||| ||||||||    
T  31235694 tttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgtt 31235642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 32521839 - 32521787
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||| | ||||| |||| ||||||||||| |||||| ||||||||    
T  32521839 tttgtaggcattatgccgttatatgttattaacttggatgttgtgagtttgtt 32521787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 32684835 - 32684887
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||| | ||||| |||||||||||||||| || ||| ||||||||    
T  32684835 tttgtaggcattatgccgttatatgctattaacttggatgctgtaagtttgtt 32684887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 35496085 - 35496033
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||| | ||||| |||||||||||||||| || ||| ||||||||    
T  35496085 tttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgtt 35496033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 3e-63; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 4 - 238
Target Start/End: Original strand, 38597773 - 38598007
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||  |||||| | | |||||| |||   |||||||||||||||| |  ||||||||||    
T  38597773 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgtggtgtttgttcagttcctattgaaagatctacatcagtcaatt 38597872  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| ||||||||||| |||||| |||||||| ||||||||||||  |||| ||||||||||||||||||||| |||    
T  38597873 acaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcagtgacttaggttttatcatattatttgtaggcattttgccg 38597972  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||||||||||||||||| ||||||||    
T  38597973 ttgtatgctattaacttgggtgttgtgagtttgtt 38598007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 13007205 - 13007444
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||   || || | |||||||| ||||  ||||| |||||||||| |  ||||||||||    
T  13007205 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgattttgtgttttgtcgcggtgtttgtttagttcctcttgaaagatctacatcagtcaatt 13007304  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| ||||||||||| |||||| |||||||| || ||||||||   |||| ||||||||||||||||||||| |||    
T  13007305 acaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgccg 13007404  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||||||||| ||| |||||||||||||    
T  13007405 ttgtatgctattaacttgggtgctgtgagtttgtttgcag 13007444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 243
Target Start/End: Original strand, 25980143 - 25980372
Alignment:
Q  13 ttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattca 112  Q
    ||||||||||||| ||||||||||| |||| ||||  |||||| | |||||||| ||||  ||||||||||||||||||  |||||||| || |||||||    
T  25980143 ttgtgttgttcgtcgtcttgtgcggcgtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattgaaagatcaacatcagtcaactacaaattca 25980242  T
Q  113 attaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgct 212  Q
    |  ||||||||||||||| | |||||||||||||||| |||||||| || ||||||||   |||| ||||||||||||||||||||| ||||| ||||||    
T  25980243 accaatgatttgggcgtcaaagttgcagattcggaagcatgggtatttc-gtgacttaagttttatcatattatttgtaggcattttgccgttatatgct 25980341  T
Q  213 attaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||||||||| ||| |||||||||||||    
T  25980342 attaacttgggtgatgtgagtttgtttgcag 25980372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 27 - 238
Target Start/End: Original strand, 10722760 - 10722971
Alignment:
Q  27 gtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttggg 126  Q
    ||||||||||| |||||||||   |||||||  ||||||||||||  |||||||||||||||| | |||||||| ||| ||||||||| |||||||||||    
T  10722760 gtcttgtgcggcgtttgattttgtgtcttatctcggtgttcgtttagttcctattgaaagatcgacttcagtcatttaaaaattcaatcaatgatttggg 10722859  T
Q  127 cgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgt 226  Q
    |||| |||||| |||| |  ||| |||||||| || |||||||||| |||| ||||||||||||||||||||| ||| |||||| |||||||||| ||||    
T  10722860 cgtcaacgttgtagatccaaaagcatgggtatttcggtgacttagattttatcatattatttgtaggcatttttccgctgtatgttattaacttgagtgt 10722959  T
Q  227 tgttagtttgtt 238  Q
    ||| ||||||||    
T  10722960 tgtgagtttgtt 10722971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 12 - 238
Target Start/End: Original strand, 13421917 - 13422143
Alignment:
Q  12 gttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattc 111  Q
    |||||||||||||| |||||||||||| ||||||||  ||| || | |  |||||| |||  |||||||||||||||| |  ||||||||||| ||||||    
T  13421917 gttgtgttgttcgtcgtcttgtgcggtatttgatttcgcgtattgtcgttgtgttcatttagttcctattgaaagatcgacatcagtcaattacaaattc 13422016  T
Q  112 aattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgc 211  Q
    ||| ||||||||||||||| | ||||||||||| |||| ||| |||| || |||||||| | |||| |||||||| |||||||||||| ||||| |||||    
T  13422017 aatcaatgatttgggcgtcaatgttgcagattctgaagcatgtgtatttcggtgacttatattttatcatattatatgtaggcatttttccgttttatgc 13422116  T
Q  212 tattaacttgggtgttgttagtttgtt 238  Q
    ||||||||||| |||||| ||||||||    
T  13422117 tattaacttggatgttgtgagtttgtt 13422143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 9113837 - 9113598
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||| |||||||||| ||||||||||| |||||||||  ||| || | |||||||| |||   ||||| |||||||||| |  ||||||||||    
T  9113837 agtgcggcgttctgttgttcgtcgtcttgtgcggcgtttgatttcacgttttgtcgcggtgtttgttcagttcctcttgaaagatctacatcagtcaatt 9113738  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| ||||||||||| |||||| || | ||| || ||||||||   |||| ||||||||||||||||||||| |||    
T  9113737 acaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatagatatttcggtgacttaagttttatcatattatttgtaggcatttttccg 9113638  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||||||||||| | |||||||| ||||    
T  9113637 ttgtatgctattaacttgggtgttctgagtttgttcgcag 9113598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 24229896 - 24229657
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||| |||||||||| |||||||| |  |||||||||  |||||| | |||||||| ||||  |||||||||||||||| |  ||| ||||||    
T  24229896 agtgcggcgttttgttgttcgtcgtcttgtgtgacgtttgatttcgcgtcttgtcgcggtgtttgtttagttcctattgaaagatctacatcaatcaatt 24229797  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| | ||||||||| ||| || |||| ||| || |||||||||  |||| ||||||||||||||||||||| |||    
T  24229796 acaaattcaagcaatgatttggacgtcaatgttgcagatccggtagcatggatatttctgtgacttaggttttatcatattatttgtaggcattttgccg 24229697  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||||||||| ||| |||||||| ||||    
T  24229696 ttgtatgctattaacttgggtgctgtgagtttgttcgcag 24229657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 2 - 243
Target Start/End: Complemental strand, 37986227 - 37985986
Alignment:
Q  2 tgagtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaa 101  Q
    ||||||| |||||||||||||| | ||||||||||| |||||||||  | |||| |||||| ||||||||||||| |||||||||||||| ||  ||||     
T  37986227 tgagtgcggcgttgtgttgttcatcgtcttgtgcggcgtttgatttcgcatcttgttgcggcgttcgtttgattcttattgaaagatcaacttttgtcat 37986128  T
Q  102 ttataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttac 201  Q
    ||| | ||||||| ||||||||| | ||||| ||| ||| | | ||| ||| ||||| | |||||||||||||||| || ||||||||||| ||||||      
T  37986127 ttacagattcaatcaatgatttgagtgtcgaagttacaggtccagaattataggtattttagtgacttagaatttatcacattatttgtagacattttgt 37986028  T
Q  202 cgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||||||||||||||||  || ||| |||||||||||||    
T  37986027 cgttgtatgctattaacttgaatgatgtgagtttgtttgcag 37985986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 12 - 243
Target Start/End: Complemental strand, 6012242 - 6012011
Alignment:
Q  12 gttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattc 111  Q
    |||||||||||||| ||||||||||| |||||||||  ||| || | |||||||| |||   |||||||| ||||||| |  ||||||||||| ||||||    
T  6012242 gttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgttcagttcctattaaaagatctacatcagtcaattacaaattc 6012143  T
Q  112 aattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgc 211  Q
    ||  |||||||||| |||| | |||| |||| |||||| |||||||| |||||||||||   || | ||||||||||||||||||| ||||||| |||||    
T  6012142 aaccaatgatttggacgtcaatgttgtagatccggaagcatgggtatttcagtgacttaagtttgatcatattatttgtaggcattctaccgttttatgc 6012043  T
Q  212 tattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||| ||| |||||||| ||||    
T  6012042 tattaacttgggtgatgtgagtttgttcgcag 6012011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 21 - 243
Target Start/End: Original strand, 34945386 - 34945608
Alignment:
Q  21 ttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatga 120  Q
    ||||| |||||||||||  ||||||||  ||| || | |||||||| |||   |||||||||||||||| |  ||||||||||| ||||||||  |||||    
T  34945386 ttcgtcgtcttgtgcggcatttgatttcgcgttttgtcgcggtgtttgttcagttcctattgaaagatctacatcagtcaattacaaattcaaccaatga 34945485  T
Q  121 tttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaactt 220  Q
    ||||| |||| ||||||||||| |||||| |||||||| || ||||||||   |||| |||||||||| ||||||||||  |||||||||||||||||||    
T  34945486 tttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttataggcattttgtcgttgtatgctattaactt 34945585  T
Q  221 gggtgttgttagtttgtttgcag 243  Q
    ||||||||| |||||||| ||||    
T  34945586 gggtgttgtgagtttgttcgcag 34945608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 60 - 238
Target Start/End: Original strand, 41630534 - 41630712
Alignment:
Q  60 cggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatg 159  Q
    ||||||||||||  |||||||| ||||||| | |||||||||||| ||||||||| ||||||||||||||| |||||||| || | |||| ||| ||||     
T  41630534 cggtgttcgtttagttcctattaaaagatcgacttcagtcaattacaaattcaatcaatgatttgggcgtcaacgttgcacatccagaagcatgtgtatt 41630633  T
Q  160 tcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    || |||||||||| |||| |||||||||||||| ||||||  ||||||||||||||||||| |||||||| ||||||||    
T  41630634 tccgtgacttagattttatcatattatttgtagacattttgtcgttgtatgctattaacttaggtgttgtgagtttgtt 41630712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 10 - 243
Target Start/End: Original strand, 6216881 - 6217114
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    ||||| |||||||||| |||||||||||  ||||||||| | |||| | || ||||| ||||  || ||||||||||||| |  ||| ||||||| ||||    
T  6216881 gcgttatgttgttcgtcgtcttgtgcggcatttgattta-catcttgtcgcagtgtttgtttagtttctattgaaagatctacatcaatcaattacaaat 6216979  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatttta-ccgttgta 208  Q
    ||||| ||||||||||||||| |||||||||||||||||| ||| |||| || |||||||| | |||| |||||||||||||||||||| |  | |||||    
T  6216980 tcaatcaatgatttgggcgtcaacgttgcagattcggaagcatgtgtatttcggtgacttaaattttatcatattatttgtaggcatttaagtcattgta 6217079  T
Q  209 tgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||||||||| ||| ||| |||||||| ||||    
T  6217080 tgctattaacttgagtgctgtgagtttgttcgcag 6217114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 61 - 243
Target Start/End: Complemental strand, 28540961 - 28540779
Alignment:
Q  61 ggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgt 160  Q
    |||||||||||| ||| ||||||||||| |  ||||| |||| | ||||||||| ||||||||||||||| ||||||||||| | |||| |||||||| |    
T  28540961 ggtgttcgtttggttcgtattgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattt 28540862  T
Q  161 cagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
      |||| ||||| || | |||||||||||||| |||||| ||||||||||||||||||||||||| ||| |||||||| ||||    
T  28540861 tggtgatttagatttcatcatattatttgtagacatttttccgttgtatgctattaacttgggtgctgtgagtttgttcgcag 28540779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 225
Target Start/End: Original strand, 35850782 - 35850996
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaatt 110  Q
    ||||||||||||||| ||||||||||| |||||||||  ||| |||| |||||||| ||||  ||||||||||||||||    ||||||||||| |||||    
T  35850782 cgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttatcgcggtgtttgtttatttcctattgaaagatcggcatcagtcaattacaaatt 35850881  T
Q  111 caattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatg 210  Q
    |||  ||||||||| ||||| |||||| |||| | |||| ||| | || || |||||||||  |||| ||||||||||| ||||| ||| ||||| ||||    
T  35850882 caaccaatgatttgtgcgtcaacgttgaagatccagaagcatgtgaatttcggtgacttaggttttatcatattatttgcaggcactttgccgttttatg 35850981  T
Q  211 ctattaacttgggtg 225  Q
    |||||||||||||||    
T  35850982 ctattaacttgggtg 35850996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 58 - 243
Target Start/End: Complemental strand, 2979364 - 2979179
Alignment:
Q  58 tgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggta 157  Q
    ||||||||||||||| ||| |||| ||||||||| ||||| |||| | ||||||||| ||||||||||||||| ||||||||||| | |||| | |||||    
T  2979364 tgcggtgttcgtttggttcgtattaaaagatcaacttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcacgggta 2979265  T
Q  158 tgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |    |||| ||||| || | ||||||||||||||||||| | |||||||||||||||||||||| |||||| |||||||| ||||    
T  2979264 ttctggtgatttagatttcatcatattatttgtaggcattgtgccgttgtatgctattaacttggatgttgtgagtttgttcgcag 2979179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 14211257 - 14211442
Alignment:
Q  58 tgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggta 157  Q
    ||||||||||||||| ||| |||||||||||||  ||||| |||| | |||| |||| |||||||||| |||| ||||||||||| | |||| |||||||    
T  14211257 tgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaatgcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggta 14211356  T
Q  158 tgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |    |||| ||||| || | ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| ||||    
T  14211357 ttctggtgatttagatttcatcatattatttgtaggcatttttctgttgtatgctattaacttgggtgttgtgagtttgttcgcag 14211442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 238
Target Start/End: Complemental strand, 31391858 - 31391631
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaatt 110  Q
    ||||||||||||| | |||||||||||  ||||||||  | |||| | || ||||| ||||  ||  ||||||||||||    ||||||||||| |||||    
T  31391858 cgttgtgttgttcttcgtcttgtgcggcatttgatttcgcatcttgtcgcagtgtttgtttagtttttattgaaagatcggcatcagtcaattacaaatt 31391759  T
Q  111 caattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatg 210  Q
    |||  ||||||||||||||| ||||||||||| | |||| ||| |||| || |||||||||  |||| |||||||| |||||||||||| | ||||||||    
T  31391758 caaccaatgatttgggcgtcaacgttgcagatccagaaggatgagtatttcggtgacttaggttttatcatattatatgtaggcatttttctgttgtatg 31391659  T
Q  211 ctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||| |||||| ||||||||    
T  31391658 ctattaacttggatgttgtgagtttgtt 31391631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 59 - 243
Target Start/End: Complemental strand, 26878165 - 26877982
Alignment:
Q  59 gcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtat 158  Q
    ||||||||||||| ||| || |||||||||| |  ||||||||||| | ||||||| ||||||||||||||| || |||||||| | |||| ||||||||    
T  26878165 gcggtgttcgtttaatttctcttgaaagatcgacatcagtcaattagatattcaatcaatgatttgggcgtcaacattgcagatccagaagcatgggtat 26878066  T
Q  159 gtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
     |  |||||||||| |||| ||||||||||||||||| |||  |||||||| |||||||||||| |||||| |||||||| ||||    
T  26878065 tttggtgacttagattttatcatattatttgtaggcactttgtcgttgtat-ctattaacttggatgttgtgagtttgttcgcag 26877982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 238
Target Start/End: Original strand, 26825406 - 26825640
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||||||||||||||  |||||||||| |||||||||  ||| || | |||||||| |||   ||||| |||||||||| |  ||||||||||    
T  26825406 agtgcggcgttgtgttgttcgtcttcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatctacatcagtcaatt 26825505  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||  ||   ||||||||||| |  ||| |||  ||| || ||||||||   |||| ||||||||||||||||||||| |||    
T  26825506 acaaattcaaccaatgatttgtacgattacgttgcagatccataagcatgtttatttcggtgacttaagttttatcatattatttgtaggcattttgccg 26825605  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||||||||||||| ||| ||||||||    
T  26825606 ttgtatgctattaacttgggtgctgtgagtttgtt 26825640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 38 - 243
Target Start/End: Complemental strand, 35921074 - 35920869
Alignment:
Q  38 tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttg 137  Q
    ||||||||||  |||||| ||||||||||| |||| |||||||| ||||||||| |||| ||||| | | ||||||| |||||||||  |||| ||||||    
T  35921074 tgtttgatttcgcgtcttgttgcggtgttcatttgtttcctattaaaagatcaaattcaatcaatcacagattcaatcaatgatttgaacgtcaacgttg 35920975  T
Q  138 cagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgt 237  Q
    ||||| |||||| || | |||   ||||| || || |||| |||||||||||||||||||||  | |||||||||||||| || |||||||| | |||||    
T  35920974 cagatccggaagcatcgatattctagtgattttgattttatcatattatttgtaggcattttgtcattgtatgctattaaatttggtgttgtaaatttgt 35920875  T
Q  238 ttgcag 243  Q
    ||||||    
T  35920874 ttgcag 35920869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 63 - 238
Target Start/End: Original strand, 15571521 - 15571697
Alignment:
Q  63 tgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtca 162  Q
    |||||||||  || ||||||||||||| | || ||| || || ||||||||| ||||||||||| ||| ||||||||||| |||||| ||| |||  |||    
T  15571521 tgttcgtttagttactattgaaagatcgactttagtaaactacaaattcaatcaatgatttgggtgtcaacgttgcagatccggaagcatgagtagttca 15571620  T
Q  163 gtgacttagaatttaccatattatttgtaggcattttacc-gttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||| | |||| |||||||||| ||| |||||| || ||||||||||||||||||||||||||| ||||||||    
T  15571621 gtgacttaaattttatcatattatttatagacatttttccagttgtatgctattaacttgggtgttgtgagtttgtt 15571697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 243
Target Start/End: Complemental strand, 11977041 - 11976808
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    ||||||| |||||||| ||||||| ||  |||||||||  |||||| | |||||||| ||||  || ||||||| |||||    ||||||||||| ||||    
T  11977041 gcgttgtattgttcgtcgtcttgtacgacgtttgatttcgcgtcttgtcgcggtgtttgtttattttctattgagagatcggcatcagtcaattacaaat 11976942  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||  |||||||||| |||  |||||| ||||  ||||| ||| | || || |||||||||  |||| ||||||||||||||||||||| ||||| |||    
T  11976941 tcaaccaatgatttggacgtgaacgttgaagatctggaagcatgtgaatttcggtgacttaggttttatcatattatttgtaggcattttcccgttttat 11976842  T
Q  210 gctattaacttgggtgttgttagtttgtttgcag 243  Q
    | ||||||||||| |||||| |||||||| ||||    
T  11976841 gttattaacttggatgttgtgagtttgttcgcag 11976808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 4 - 238
Target Start/End: Complemental strand, 8096609 - 8096376
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||||||||||||||||| ||| ||||  ||||||||  |||||| | |||||||||||||  |||||||||||||||     ||| ||||||    
T  8096609 agtgcggcgttgtgttgttcgttgttttgagcggcatttgatttcgcgtcttgtcgcggtgttcgtttagttcctattgaaagattggcatcaatcaatt 8096510  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | || |||||  ||||||||| ||||| || |||||||  ||||   ||| | || ||||||| ||||  |||| ||||||||||||||||||||| ||     
T  8096509 acaatttcaaccaatgatttgagcgtcaacattgcagaaccggagccatgtg-atttcagtgatttaggttttatcatattatttgtaggcattttgcca 8096411  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    || ||||||||||||||||||| ||| ||||||||    
T  8096410 ttttatgctattaacttgggtggtgtgagtttgtt 8096376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 12 - 238
Target Start/End: Complemental strand, 14726565 - 14726339
Alignment:
Q  12 gttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattc 111  Q
    |||||||||||||| |||||||||| ||||||||||  |||||| |  ||||||| ||||  ||| ||||||||||||    ||||||||| | ||||||    
T  14726565 gttgtgttgttcgtcgtcttgtgcgatgtttgatttcgcgtcttgtcacggtgttagtttatttcttattgaaagatcggcatcagtcaatcacaaattc 14726466  T
Q  112 aattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgc 211  Q
    ||  ||||||||||| ||| |||||| |||| |||||| ||| | || |  |||||||||  |||| |||||||||||||||||||||  |||| |||      
T  14726465 aaccaatgatttgggtgtcaacgttgaagatccggaagcatgtgaattttggtgacttaggttttatcatattatttgtaggcattttgtcgttttataa 14726366  T
Q  212 tattaacttgggtgttgttagtttgtt 238  Q
    ||||||||||| || ||| ||||||||    
T  14726365 tattaacttggatgctgtgagtttgtt 14726339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 58 - 243
Target Start/End: Complemental strand, 19103525 - 19103340
Alignment:
Q  58 tgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggta 157  Q
    ||||||||||||||||||| ||| ||||||| |  ||||| |||| | ||||||||| ||||||||||||||| |  |||||||| | |||| ||| |||    
T  19103525 tgcggtgttcgtttgattcgtatcgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaatattgcagatccagaagcatgagta 19103426  T
Q  158 tgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |  | |||| ||||| || | |||||||||| |||||||||| |||||||||||||||||||| |||| | | |||||||| ||||    
T  19103425 ttccggtgatttagatttcatcatattatttataggcatttttccgttgtatgctattaactttggtgctatgagtttgttcgcag 19103340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 238
Target Start/End: Original strand, 38007343 - 38007567
Alignment:
Q  13 ttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattca 112  Q
    ||||| ||||| | ||||||||||| |||||||||   || || | |||||||| ||||  ||||||||||||||||    ||||||||||| ||||| |    
T  38007343 ttgtgctgttcatcgtcttgtgcggcgtttgatttcgtgttttgtcgcggtgtttgtttatttcctattgaaagatcggcatcagtcaattacaaattta 38007442  T
Q  113 attaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgct 212  Q
    |  |||||||||| |||| |||||| |||| |||||| ||| | || || |||| ||||  |||| ||||||||||||||||||||| || || ||||||    
T  38007443 accaatgatttggacgtcaacgttgaagatccggaagcatgtgaatttcggtgaattaggttttatcatattatttgtaggcattttgcc-ttttatgct 38007541  T
Q  213 attaacttgggtgttgttagtttgtt 238  Q
    ||||||||||||| ||| ||||||||    
T  38007542 attaacttgggtgctgtgagtttgtt 38007567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 243
Target Start/End: Original strand, 7036218 - 7036433
Alignment:
Q  27 gtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttggg 126  Q
    ||||||||||| |||||||||  |||||| |   |||||||||||  ||| | || ||||||| |  | ||||||||| ||||| |||  ||||||||||    
T  7036218 gtcttgtgcggcgtttgatttcgcgtcttgtcatggtgttcgtttagttcatgttaaaagatcgacataagtcaattacaaattgaatctatgatttggg 7036317  T
Q  127 cgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgt 226  Q
    |||| ||||||||||| || ||| |||||||| ||   |||||||| |||| |||||| |||||||| ||||| | ||||||||||||||| |||| |||    
T  7036318 cgtcaacgttgcagatccgaaagcatgggtatttcgaggacttagattttatcatattgtttgtaggaattttgctgttgtatgctattaaattggttgt 7036417  T
Q  227 tgttagtttgtttgcag 243  Q
    | | |||||||||||||    
T  7036418 t-tgagtttgtttgcag 7036433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 235
Target Start/End: Original strand, 7930153 - 7930384
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| ||||||||||  |||||||||  | |||  | || ||||| ||||  ||||||| |||||||| |  ||||||||||    
T  7930153 agtgcggcgttgtgttgttcgtcgtcttgtgcgtcgtttgatttcgcatctggtcgcagtgtttgtttagttcctatggaaagatcgacgtcagtcaatt 7930252  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  ||||||||| ||||| | ||||||||| |||||| ||| |||| |  ||  |||||  |||| |||||||||||||||||||||  ||    
T  7930253 acaaattcaaccaatgatttgagcgtcaatgttgcagatccggaagcatgagtatttaggtttcttaggttttatcatattatttgtaggcattttgtcg 7930352  T
Q  204 ttgtatgctattaacttgggtgttgttagttt 235  Q
    |||||| | |||||| ||| || ||| |||||    
T  7930353 ttgtataccattaacctggatgctgtgagttt 7930384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 243
Target Start/End: Complemental strand, 8088317 - 8088085
Alignment:
Q  13 ttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    ||||||||||  | |||||||||||   ||||||||||  | |||| |||| ||||||||| | ||| |||||||||||||  |||||||||| | | ||    
T  8088317 ttgtgttgtttatcgtcttgtgcggcgttgtttgatttggcatcttgttgcagtgttcgttgg-ttcatattgaaagatcagcttcagtcaatcacagat 8088219  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||| |||||||||| |||| ||||||||||| |  ||  | | ||||    |||| ||||| | || ||||||||||||||||||||| || ||||||    
T  8088218 tcaatcaatgatttggacgtcaacgttgcagatccaaaaacaagagtattctggtgatttagattatatcatattatttgtaggcattttgcctttgtat 8088119  T
Q  210 gctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||||| | |||||||| ||||    
T  8088118 gctattaacttgggtgttatgagtttgttcgcag 8088085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 98 - 220
Target Start/End: Complemental strand, 14082414 - 14082292
Alignment:
Q  98 tcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatt 197  Q
    ||||||| |||| |||  || ||||||||| || ||||||||||| |||||| |||||||| ||| ||||||||  |||| |||||||||||||||||||    
T  14082414 tcaattacaaatccaaccaaagatttgggcatcaacgttgcagatccggaagcatgggtatttcaatgacttaggttttatcatattatttgtaggcatt 14082315  T
Q  198 ttaccgttgtatgctattaactt 220  Q
    ||  |||||||||||||||||||    
T  14082314 ttgtcgttgtatgctattaactt 14082292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 158
Target Start/End: Complemental strand, 11074012 - 11073858
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||||||||||| |||||||| ||||||||||| |||||||||  |||||| | |||||||| |||   |||||||||||| ||| |  ||| ||||||    
T  11074012 agtgcagcgttgttttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaatatctacatcaatcaatt 11073913  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtat 158  Q
    | ||||||||  |||||||||| |||| ||||| ||||| || ||| ||||||||    
T  11073912 acaaattcaagcaatgatttggacgtcaacgttacagatccgaaagcatgggtat 11073858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 79 - 238
Target Start/End: Original strand, 39567321 - 39567480
Alignment:
Q  79 attgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttac 178  Q
    ||||||||||||  ||||| |||| | ||||||||| |||||||||| |||| || |||||||| | |||  ||||||||    |||| ||||| || |     
T  39567321 attgaaagatcagcttcagacaatcacaaattcaatcaatgatttggacgtcaacattgcagatccagaaacatgggtattctggtgatttagatttcat 39567420  T
Q  179 catattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||||| ||||||  ||||||||| ||||| |||||||||||| ||||||||    
T  39567421 catattatttgtagacattttgtcgttgtatgttattaccttgggtgttgtgagtttgtt 39567480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 38111063 - 38110940
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtca 100  Q
    ||||||| ||||||||||| ||||||||||||||   ||||||||||   ||||| |||| ||||| ||||| |||||||||||| |||||||| |||||    
T  38111063 agtgcagtgttgtgttgtttgttgtcttgtgcggcgttgtttgattttgtgtcttgttgcagtgtttgtttggttcctattgaaatatcaatttaagtca 38110964  T
Q  101 attataaattcaattaatgatttg 124  Q
    || ||||| ||| | |||||||||    
T  38110963 atcataaactcagtcaatgatttg 38110940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 227
Target Start/End: Original strand, 41749336 - 41749525
Alignment:
Q  38 tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttg 137  Q
    ||||||||||  | |||| |||| |||||||||||||||||||||| ||| ||| |||| ||||||  | ||||||| |||||||| | ||||| | ||     
T  41749336 tgtttgatttcacatcttgttgcagtgttcgtttgattcctattgagagaccaacttcaatcaattccagattcaatcaatgatttagacgtcggcattc 41749435  T
Q  138 cagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgtt 227  Q
     ||||||||||| ||  ||||  |||| ||| | |||||| |||||||  ||||| ||||||  | |||||||| |||||||||||||||    
T  41749436 tagattcggaagcatatgtattccagtcactcataatttatcatattaaatgtagacattttgtcattgtatgcaattaacttgggtgtt 41749525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 19120886 - 19121127
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtca 100  Q
    ||||| |||||||||||||||| ||||| || ||   ||||||||||  |||||| |||||||||| ||||| ||||| ||| |||||||  ||||||||    
T  19120886 agtgcggcgttgtgttgttcgtcgtcttatgaggcattgtttgatttcgcgtcttgttgcggtgtttgtttgtttccttttg-aagatcagcttcagtca 19120984  T
Q  101 attataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatttta 200  Q
    |||| |||||| || ||||| ||  ||||| ||| |||||||   |||  |||  ||| || |||||||||  |||| |||||||||||||| | ||||     
T  19120985 attacaaattctatcaatgacttaagcgtcaacgctgcagatctagaaacatgaatatttcggtgacttaggttttatcatattatttgtagacgttttg 19121084  T
Q  201 ccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |  ||||||| |||||| |||| || ||| |||||||| ||||    
T  19121085 ctcttgtatgatattaatttggatgatgtgagtttgttcgcag 19121127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 238
Target Start/End: Complemental strand, 10332656 - 10332425
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataa 107  Q
    |||||||||||| || |||||||||||   ||||||||||  |||||| |||| ||||| ||||||||| ||||||||||| |   ||||||||| | |     
T  10332656 cgttgtgttgtttgtcgtcttgtgcggcattgtttgatttcgcgtcttgttgcagtgtttgtttgattcatattgaaagattaggctcagtcaatcacat 10332557  T
Q  108 attcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcag-tga-cttagaatttaccatattatttgtaggcattttaccgtt 205  Q
    |||| ||  ||||||| | |  | ||||||||||| |||||| ||| |||| || | |||  ||||| || | |||||| ||||||||||||||  | ||    
T  10332556 attcgatcgatgatttagacaccaacgttgcagatccggaagcatgagtat-tctgatgattttagatttcatcatattttttgtaggcattttgtcttt 10332458  T
Q  206 gtatgctattaacttgggtgttgttagtttgtt 238  Q
     ||||||||||||||||||| ||| ||||||||    
T  10332457 atatgctattaacttgggtgatgtgagtttgtt 10332425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 7613131 - 7613053
Alignment:
Q  14 tgtgttgttcgttgtcttgtgc---ggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||||| |||||||||   | |||||||||| ||||||| ||||||||||| |||||||| ||||||||||||    
T  7613131 tgtgttgttcgtcgtcttgtgcaatgttgtttgatttctcgtcttgttgcggtgttcatttgattcatattgaaagatc 7613053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 243
Target Start/End: Original strand, 34881726 - 34881943
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattca 112  Q
    |||||||||| |||||||||||   ||||||||||  ||||||  |||||||||| |||||||| ||||||||||||||||              |||||    
T  34881726 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcaatt--------------attca 34881811  T
Q  113 attaatgatttgggcgtcgacgttgcagattcggaag-tatgggtatgtcagtgacttagaatttaccatat-tatttgtaggcattttaccgttgtatg 210  Q
    || || |||||||||||| ||||||||||| |||| |  |||| ||| || || ||||  | | || ||||| | |||||||||||| | ||||| ||||    
T  34881812 atcaaagatttgggcgtcaacgttgcagatccggaggccatggatat-tccgtcactttaattatatcatatatttttgtaggcattatgccgttatatg 34881910  T
Q  211 ctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| |||||| |||||||||||||    
T  34881911 ctattaacttggatgttgtgagtttgtttgcag 34881943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 220
Target Start/End: Original strand, 1409533 - 1409690
Alignment:
Q  63 tgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtca 162  Q
    |||||||||  ||| |||| ||||||| |  ||| ||||||| ||||||||| ||||||||  ||||| | ||||||||| || ||  |||  ||| | |    
T  1409533 tgttcgtttagttcatattaaaagatcgacatcaatcaattacaaattcaatcaatgatttatgcgtcaatgttgcagatccgaaaacatgaatatttta 1409632  T
Q  163 gtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaactt 220  Q
    |||||||||| || | ||||||||||| ||  ||||| |||||||| |||||||||||    
T  1409633 gtgacttagatttaatcatattatttgaagatattttgccgttgtacgctattaactt 1409690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 11867772 - 11867864
Alignment:
Q  151 atgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||| || || ||||||| ||||  ||||||||||||||||||||   ||||||||||||||| |||||| |||| || ||||| ||||    
T  11867772 atgggtatttctgttacttagattttattatattatttgtaggcattttgttgttgtatgctattaatttgggtattgtgagcttgttcgcag 11867864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 243
Target Start/End: Original strand, 11192459 - 11192594
Alignment:
Q  108 attcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgt 207  Q
    ||||||| ||||||||||| ||| |||||| |||| |||||  ||| |||| ||  | ||||  |||||| | ||||||||||| |||||||  ||||||    
T  11192459 attcaataaatgatttgggtgtcaacgttgtagatccggaaacatgagtatttcgatcactttaaatttatcgtattatttgtaagcattttgtcgttgt 11192558  T
Q  208 atgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||| ||||||||| | |||||| | |||||| ||||    
T  11192559 atgttattaactttgatgttgtaaatttgttggcag 11192594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 11867646 - 11867753
Alignment:
Q  6 tgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattat 105  Q
    ||||| ||||||||||| || ||||||| ||| |||||||||  |||||| | ||  |||||||||  |||||||| ||||||| |  |||||||||||     
T  11867646 tgcagtgttgtgttgttagtcgtcttgtacggcgtttgatttcgcgtcttgtcgcattgttcgtttagttcctattaaaagatcgacatcagtcaattac 11867745  T
Q  106 aaattcaa 113  Q
    ||||||||    
T  11867746 aaattcaa 11867753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 243
Target Start/End: Original strand, 16981298 - 16981518
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattca 112  Q
    |||||||||| |||||||||||   ||||| ||||  |||||| ||||||||||| |||||||| |||||||||||| |||              |||||    
T  16981298 tgttgttcgtcgtcttgtgcggcattgtttaattttccgtcttcttgcggtgttcctttgattcatattgaaagatcgatt--------------attca 16981383  T
Q  113 attaatgatttgggcgtcgacgttgcagattcggaagt-atgggtatgtcagtgacttagaatttaccatat---tatttgtaggcattttaccgttgta 208  Q
    || || ||||||||||||  |||||||||| |||| || |||| |||  | |||||||  | |||| |||||   | |||||||||||| || |||| ||    
T  16981384 atcaaagatttgggcgtcatcgttgcagatccggaggtcatggatattccggtgactttaattttatcatatatatttttgtaggcattatatcgttata 16981483  T
Q  209 tgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||| |||||| |||||||| ||||    
T  16981484 tgctattaacttggatgttgtgagtttgttcgcag 16981518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 36344562 - 36344481
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaattt 94  Q
    |||||||||| |||||||||||   ||||||||||  ||| || ||||||||||| |||||||| ||||||||||| |||||    
T  36344562 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtttttttgcggtgttcatttgattcatattgaaagattaattt 36344481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 7150406 - 7150326
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatt 93  Q
    |||||||||| |||||||||||   |||||| |||  |||||| ||||||||||| ||| ||||| |||||||||||||||    
T  7150406 tgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcccattgaaagatcaatt 7150326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 27266930 - 27266854
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||   ||||||||||  ||||||  |||||||||| |||||||| ||||||||||||    
T  27266930 tgttgttcgtcgtcttgtgcggcactgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 27266854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 31280881 - 31280923
Alignment:
Q  180 atattatttgtaggcattttaccgttgtatgctattaacttgg 222  Q
    ||||||||||||||||||||| |||| ||||||||||||||||    
T  31280881 atattatttgtaggcattttatcgttttatgctattaacttgg 31280923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 41184511 - 41184435
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||   ||||||||||  ||||||  || |||||||||||||||| ||||||||||||    
T  41184511 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgtggtgttcgtttgattcatattgaaagatc 41184435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 43148896 - 43148953
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| | ||||| |||||||||||||||| |||||| |||||||| ||||    
T  43148896 tttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcag 43148953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 32691109 - 32691177
Alignment:
Q  180 atattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcagtttcg 248  Q
    ||||||||| ||| |||||| ||||||||| ||||||| ||  ||||||| ||||||||||||| ||||    
T  32691109 atattatttatagacattttgccgttgtatactattaagttaagtgttgtgagtttgtttgcagattcg 32691177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 2057909 - 2057833
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||| ||||   ||||||||||  ||||||  |||||||||| |||||||| ||||||||||||    
T  2057909 tgttgttcgtcgtcttgcgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 2057833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 28097305 - 28097351
Alignment:
Q  174 tttaccatattatttgtaggcattttaccgttgtatgctattaactt 220  Q
    |||| ||||||||||||||  ||||||| ||||||||||||||||||    
T  28097305 tttatcatattatttgtagttattttactgttgtatgctattaactt 28097351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 43148739 - 43148815
Alignment:
Q  16 tgttgttcgttgtcttgtgcggtgtt---tgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||||||   || |||  |||||| ||||| ||||| ||| |||||||||||||||||    
T  43148739 tgttgttcgtcgtcttgtgcggtgttgtttgctttcccgtcttcttgcgttgttcattttattcctattgaaagatc 43148815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 7241953 - 7242010
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| | ||||| |||||||||||||||| || ||| |||||||| ||||    
T  7241953 tttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcag 7242010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 7247128 - 7247185
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| | ||||| |||||||||||||||| || ||| |||||||| ||||    
T  7247128 tttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcag 7247185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 8984915 - 8984858
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||||||||||  |||| ||| |||||||||||| |||||| |||||||| ||||    
T  8984915 tttgtaggcattttgtcgttatatactattaacttggatgttgtgagtttgttcgcag 8984858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 10649652 - 10649715
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattc 76  Q
    |||||||||| |||||||||||   ||||||||||| ||||||  |||||||||| ||||||||    
T  10649652 tgttgttcgtcgtcttgtgcggcgttgtttgatttaccgtcttcgtgcggtgttcatttgattc 10649715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 15571076 - 15571133
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| |  |||| |||||||||||||||| |||||| |||||||| ||||    
T  15571076 tttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcag 15571133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 19259722 - 19259665
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| | ||||| |||||||||||||||| || ||| |||||||| ||||    
T  19259722 tttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcag 19259665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 30298216 - 30298287
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaa 84  Q
    |||||||||| |||||||||||   ||||||||||  |||||| ||||||||||  |||||||| |||||||    
T  30298216 tgttgttcgtcgtcttgtgcggcgctgtttgattttccgtcttcttgcggtgtttatttgattcatattgaa 30298287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 4954161 - 4954213
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||| | ||||| |||||||||||||| | |||||| ||||||||    
T  4954161 tttgtaggcattatgccgttatatgctattaactttgatgttgtgagtttgtt 4954213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 16758572 - 16758636
Alignment:
Q  60 cggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttg 124  Q
    ||||||||||||| ||| |||||||| |||  | ||||||||| ||| ||||||| |||||||||    
T  16758572 cggtgttcgtttggttcatattgaaaaatctgtgtcagtcaatcatagattcaatcaatgatttg 16758636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 19349679 - 19349757
Alignment:
Q  13 ttgtgttgttcgttgtcttgtgcggtgtt---tgatttatcgtcttattgcggtgttcgtttgattcctattgaaagat 88  Q
    ||||||||||||| ||||||||||| |||   ||||||  |||||  ||||  |||||||||| |||||||||||||||    
T  19349679 ttgtgttgttcgtcgtcttgtgcggcgttatttgatttcacgtctagttgcaatgttcgtttggttcctattgaaagat 19349757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 42886484 - 42886562
Alignment:
Q  14 tgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||||| |||||||||||   ||||||||||  || ||| |||| |||||| |||||||| |||| |||||||    
T  42886484 tgtgttgttcgtcgtcttgtgcggcgttgtttgatttcccgccttgttgcagtgttcatttgattcatattaaaagatc 42886562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 43008225 - 43008173
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||| | ||||| |||||||||||||||| |||| | ||||||||    
T  43008225 tttgtaggcattatgccgttatatgctattaacttggatgttatgagtttgtt 43008173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 119; Significance: 8e-61; HSPs: 69)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 4 - 238
Target Start/End: Complemental strand, 29255557 - 29255324
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    |||| ||||||||||||||||| |||||||||   ||||||||| | ||||||| |||||||||||||  ||||||||||||||||    ||||||||||    
T  29255557 agtgtagcgttgtgttgttcgtcgtcttgtgcaacgtttgatttgt-gtcttatcgcggtgttcgtttagttcctattgaaagatcttcatcagtcaatt 29255459  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||| ||||||||||||||| ||||| ||||| |||||  |||||||| || |||||||||| |||| |||||||||||||||||||| || |    
T  29255458 acaaattcaatcaatgatttgggcgtcaacgttacagatccggaaacatgggtatttcggtgacttagattttatcatattatttgtaggcatttcactg 29255359  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||||||||||||||||| ||||||||    
T  29255358 ttgtatgctattaacttgggtgttgtgagtttgtt 29255324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 243
Target Start/End: Original strand, 34018544 - 34018777
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    |||||||||||||||| |||||||| |  |||||||||   ||||| | |||||||||||||  |||||||||||||||| |  ||||| ||||| ||||    
T  34018544 gcgttgtgttgttcgtcgtcttgtgagacgtttgatttcatgtcttgtcgcggtgttcgtttagttcctattgaaagatcgagatcagttaattacaaat 34018643  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    |||| |||||||||||||||| ||||||||||| |||||| ||| |||| |||||||||||   |||| ||||||||||||||||||||||| |||||||    
T  34018644 tcaactaatgatttgggcgtcaacgttgcagatccggaagcatgagtatttcagtgacttatgttttatcatattatttgtaggcattttactgttgtat 34018743  T
Q  210 gctattaacttgggtgttgttagtttgtttgcag 243  Q
      ||||| |||||||||||| ||||||| |||||    
T  34018744 attattatcttgggtgttgtgagtttgtctgcag 34018777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 4 - 238
Target Start/End: Complemental strand, 33053280 - 33053046
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||  ||| || | |||||||| |||   ||||| |||||||||| |  ||||||||||    
T  33053280 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatctacatcagtcaatt 33053181  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||  |||| ||||||||||| |||||| |||||||| |||||||||||   |||| ||||||||||||||||||||| |||    
T  33053180 acaaattcaaccaatgatttgaacgtcaacgttgcagatccggaagcatgggtatttcagtgacttaagttttatcatattatttgtaggcattttgccg 33053081  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    ||||||||||||||||||| || ||| ||||||||    
T  33053080 ttgtatgctattaacttggatgctgtgagtttgtt 33053046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 30608619 - 30608389
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaatt 110  Q
    ||||||||||||||| ||||||||||| |||||||||  ||| || | || |||||| |||  |||||||||||||||| |  | ||||||||| |||||    
T  30608619 cgttgtgttgttcgtcgtcttgtgcggcgtttgattttgcgt-ttgtcgctgtgttcatttagttcctattgaaagatcgacataagtcaattacaaatt 30608521  T
Q  111 caattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatg 210  Q
    |||  ||||||||||| ||| |||||||||||  ||||  |||||||| || |||||||| | |||| ||||||||||||||||||||||||||||||||    
T  30608520 caaccaatgatttgggtgtcaacgttgcagatctggaatcatgggtatttcggtgacttatattttatcatattatttgtaggcattttaccgttgtatg 30608421  T
Q  211 ctattaacttgggtgttgttagtttgtttgca 242  Q
    |||||||||||| |||||| || |||||||||    
T  30608420 ctattaacttggatgttgtgagattgtttgca 30608389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 4 - 238
Target Start/End: Original strand, 127648 - 127879
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    |||||||||||||||||||||| |||||||| |   ||||||||  ||| || | ||||||||| |||  |||||||||||||||| |  ||||||||||    
T  127648 agtgcagcgttgtgttgttcgtcgtcttgtgtgacatttgatttcgcgt-ttgtcgcggtgttcatttagttcctattgaaagatcgacatcagtcaatt 127746  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | |||||| || ||||||||||||||| |||||||||||||||||| ||| |||| || |||| ||||| |||| ||||||||||||||||||||| |||    
T  127747 acaaattcgatcaatgatttgggcgtcaacgttgcagattcggaagcatgagtatttcggtgatttagattttatcatattatttgtaggcattttgccg 127846  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||  |||||||||||||| || ||| ||||||||    
T  127847 ttg--tgctattaacttggttgctgtgagtttgtt 127879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 606182 - 606421
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||||||||||||||  |||||||||| |||||||||  | | || | |||||||| |||   |||||||||||||||| |  ||||||||||    
T  606182 agtgcggcgttgtgttgttcgtcatcttgtgcggcgtttgatttcgcattttgtcgcggtgtttgttcagttcctattgaaagatctacatcagtcaatt 606281  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    ||||||||||  |||||||||| | || ||||||||||| |||||  |||||||| || ||||||||   |||| ||||||||||||||||||||| ||     
T  606282 ataaattcaaccaatgatttggacatcaacgttgcagatccggaaacatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgcca 606381  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||||||||| ||| |||||||| ||||    
T  606382 ttgtatgctattaacttgggtgctgtgagtttgttcgcag 606421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 3913686 - 3913447
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| |||||||||   |||||||||  |||||| | |||||||| |||   |||||||||||||||| |  ||| ||||||    
T  3913686 agtgcggcgttgtgttgttcgtcgtcttgtgcaacgtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatcaatt 3913587  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||| | |||| ||||||||||| | |||| |||||||| || |||| ||||  |||| ||||||||||||||||||||| ||     
T  3913586 acaaattcaagcaatgatttagacgtcaacgttgcagatccagaagcatgggtatttcggtgatttaggttttatcatattatttgtaggcattttgcca 3913487  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||||||||||||| |||||||| ||||    
T  3913486 ttgtatgctattaacttgggtgttgtgagtttgttcgcag 3913447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 23128596 - 23128835
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| |||||||| || |||||||||  ||| || | || ||||| |||   ||| ||||||||||||||  ||||||||||    
T  23128596 agtgcggcgttgtgttgttcgtcgtcttgtgtggcgtttgatttcgcgttttgtcgcagtgtttgttcagttcttattgaaagatcaacatcagtcaatt 23128695  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||| ||||||||||  ||| |||||| |||| |||||| |||||||| || ||||||||   |||| ||||||||||||||||||||| |||    
T  23128696 acaaattcaatcaatgatttggatgtcaacgttgtagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgccg 23128795  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||| ||||||| ||| |||||||| ||||    
T  23128796 ttgtatgctattaatttgggtgctgtgagtttgttcgcag 23128835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 243
Target Start/End: Complemental strand, 26588589 - 26588345
Alignment:
Q  2 tgagtgcagcgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagt 98  Q
    ||||||| | ||||||||| | || |||||||||||   ||||||||||  |||||| |||||||||||||||| ||| |||||||||||||| ||||||    
T  26588589 tgagtgcggagttgtgttgattgtcgtcttgtgcggcgttgtttgatttcccgtcttgttgcggtgttcgtttggttcatattgaaagatcaacttcagt 26588490  T
Q  99 caattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattt 198  Q
    |||| | | ||||||||||||||||||  ||| |||||||| || | |||| ||| |||| |  |||| || || |||| |||||||||| ||| |||||    
T  26588489 caatcacacattcaattaatgatttggatgtcaacgttgcaaatccagaagcatgagtatttgggtgattttgattttatcatattatttttagacattt 26588390  T
Q  199 taccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    | | |||||||||| ||||||||| ||| || |||||||||||||    
T  26588389 tgctgttgtatgctcttaacttggatgtcgtgagtttgtttgcag 26588345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 77 - 238
Target Start/End: Original strand, 20225902 - 20226063
Alignment:
Q  77 ctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaattt 176  Q
    |||||| |||||||| |||| ||| ||| ||||||||| |||||||| |||| ||||||||||||||| |||| ||| |||| ||  ||| |||||||||    
T  20225902 ctattggaagatcaacttcattcagttacaaattcaatcaatgattttggcgccgacgttgcagattctgaagcatgagtatttcgatgagttagaattt 20226001  T
Q  177 accatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    | |||||||||||||||||||||  ||||||||||||||||||||||| |||| ||||||||    
T  20226002 atcatattatttgtaggcattttgtcgttgtatgctattaacttgggtattgtgagtttgtt 20226063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 77 - 238
Target Start/End: Original strand, 22119886 - 22120047
Alignment:
Q  77 ctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaattt 176  Q
    |||||| |||||||| |||| ||| ||| ||||||||| |||||||| |||| ||||||||||||||| |||| ||| |||| ||  ||| |||||||||    
T  22119886 ctattggaagatcaacttcattcagttacaaattcaatcaatgattttggcgccgacgttgcagattctgaagcatgagtatttcgatgagttagaattt 22119985  T
Q  177 accatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    | |||||||||||||||||||||  ||||||||||||||||||||||| |||| ||||||||    
T  22119986 atcatattatttgtaggcattttgtcgttgtatgctattaacttgggtattgtgagtttgtt 22120047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 30493504 - 30493749
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcag 97  Q
    |||||||| | |||||||||||||| ||||||||| |   ||||||||||    |||| ||  |||||||||||| ||| |||||||||||||| |||||    
T  30493504 ctgagtgcggtgttgtgttgttcgtcgtcttgtgcagcgttgtttgatttcgtatcttgttctggtgttcgtttggttcatattgaaagatcaacttcag 30493603  T
Q  98 tcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatt 197  Q
    |||||   | ||||||| |||||||||| |||| |||||||| || |||||| |||||||| |  |||| ||| | |||| ||| || ||||||||||||    
T  30493604 tcaatctcatattcaatcaatgatttggacgtcaacgttgcaaatccggaagcatgggtattttggtgatttatattttatcatgttgtttgtaggcatt 30493703  T
Q  198 ttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    || |||||||||||||||||| |||||||||| | |||||| ||||    
T  30493704 ttgccgttgtatgctattaacctgggtgttgtgaatttgttcgcag 30493749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 546062 - 546248
Alignment:
Q  58 tgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaa-ttcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggt 156  Q
    ||||||||||||||| ||| |||||||||||||  ||||| |||| | ||| |||||| ||||||||||||||| ||||||||||| | |||| ||||||    
T  546062 tgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggt 546161  T
Q  157 atgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||    |||  ||||| || | ||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||| ||||    
T  546162 attctggtggtttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcag 546248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 4 - 222
Target Start/End: Complemental strand, 7515314 - 7515096
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||| |||||||||| |||||| |||  |||||||||  |||||| | |||||||| ||||  ||||||||| || ||| |  ||| ||||||    
T  7515314 agtgcggcgttttgttgttcgtcgtcttgggcgacgtttgatttcgcgtcttgtcgcggtgtttgtttagttcctattggaatatctacatcactcaatt 7515215  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||| |||||| |||||||| || |||||| ||| ||||||| |||||||||  |||| ||||||||||||||||||||| | |    
T  7515214 acaaattcaaccaatgatttaggcgtcaacgttgcaaatccggaagcatgtgtatgtcggtgacttaggttttatcatattatttgtaggcatttttctg 7515115  T
Q  204 ttgtatgctattaacttgg 222  Q
     ||||||||||||||||||    
T  7515114 ctgtatgctattaacttgg 7515096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 62 - 243
Target Start/End: Original strand, 14801863 - 14802044
Alignment:
Q  62 gtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtc 161  Q
    ||||||||||| ||| ||||||||||| |  ||||| |||| | ||||||||| ||||||||||||||| ||||||||||| | |||| ||| |||| |     
T  14801863 gtgttcgtttggttcgtattgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagaatgtgtatttt 14801962  T
Q  162 agtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
     |||| ||||| || | ||||||||||||||||||||| |||||||||||||||||||||| || ||| |||||||| ||||    
T  14801963 ggtgatttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcag 14802044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 32 - 236
Target Start/End: Original strand, 12170474 - 12170678
Alignment:
Q  32 gtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcg 131  Q
    |||||| |||||||||  |||||| | |||||||| |||   |||||||||||||||| |  ||| ||||||| ||||||||  ||||||||||  |||     
T  12170474 gtgcggcgtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttggatgtca 12170573  T
Q  132 acgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgtta 231  Q
    ||||||||||| |||||| |||||||| || |||| ||||  || | ||||||||||||||||||||| | ||||||||||||||||||||||| ||| |    
T  12170574 acgttgcagatccggaagcatgggtatttcggtgatttaggtttgatcatattatttgtaggcattttgctgttgtatgctattaacttgggtgctgtga 12170673  T
Q  232 gtttg 236  Q
    |||||    
T  12170674 gtttg 12170678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 29319990 - 29319750
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||||||||||||||  |||| ||||| |||||||||  |||||| | |||||||| |||   ||| |||||||||||| |  ||||||||||    
T  29319990 agtgcggcgttgtgttgttcgtcctcttatgcggcgtttgatttcgcgtcttgtcgcggtgtttgttaacttcatattgaaagatctacatcagtcaatt 29319891  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatatta-tttgtaggcattttacc 202  Q
    | ||||||||  |||||||||  |||| |||||||| || |||||| ||| |||| |  ||||||||   |||| ||||||| |||||| ||||||||||    
T  29319890 acaaattcaaccaatgatttgaacgtcaacgttgcaaatccggaagcatgtgtattttggtgacttaagttttatcatattattttgtaagcattttacc 29319791  T
Q  203 gttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||||||| |||| | |||||||| ||||    
T  29319790 gttgtatgctattaacttggttgttatgagtttgttcgcag 29319750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 4010611 - 4010430
Alignment:
Q  16 tgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaatt 115  Q
    |||||||||| |||||||||    ||||||||  |||| | ||||| |||| ||||||||||||||||||||||| | ||| ||||||| | |||||||     
T  4010611 tgttgttcgtcgtcttgtgcatcatttgattttgcgtcatgttgcgatgtttgtttgattcctattgaaagatca-tatcaatcaattacatattcaatc 4010513  T
Q  116 aatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattt 198  Q
    ||||||||||| || |||||||||||| |||||| ||| |||| || ||||||||||||||| |||||||||| |||||||||    
T  4010512 aatgatttgggtgttgacgttgcagatccggaagcatgagtatttcggtgacttagaatttatcatattatttataggcattt 4010430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 238
Target Start/End: Complemental strand, 32327329 - 32327098
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||  |||||| | ||||||||  ||  ||| ||||||||||||| |  ||| ||||||    
T  32327329 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgcggtgtttattcaatttctattgaaagatctacatcaatcaatt 32327230  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||| | |||  ||||||||||| |||||| ||| |||  |  |||| ||||  |||| ||||||||||||||||||||| ||     
T  32327229 acaaattcaagcaatgattttgacgttaacgttgcagatccggaagcatgagtagtttggtgatttaggttttatcatattatttgtaggcattttgcc- 32327131  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtt 238  Q
      |||||||||||||||||||| ||| ||||||||    
T  32327130 --gtatgctattaacttgggtgctgtgagtttgtt 32327098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 12 - 199
Target Start/End: Original strand, 3355103 - 3355290
Alignment:
Q  12 gttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattc 111  Q
    ||||||||||||||  ||||||| |  |||||||||  |||||| ||| |||||||||||  ||||||||||||| || |  ||||||||||||||||||    
T  3355103 gttgtgttgttcgtcctcttgtgtgacgtttgatttcgcgtcttgttgtggtgttcgtttagttcctattgaaaggtcgacatcagtcaattataaattc 3355202  T
Q  112 aattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatttt 199  Q
    ||| |||||||||| |||| || |||||||| |||||| ||| |||| ||||||||||||| |||| | |||| |||| || ||||||    
T  3355203 aatgaatgatttggacgtcaactttgcagatccggaagcatgagtatttcagtgacttagattttatcctattgtttggagacatttt 3355290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 2 - 247
Target Start/End: Original strand, 31296793 - 31297041
Alignment:
Q  2 tgagtgcagcgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagt 98  Q
    ||||||| |||||||||||||| |  ||||||||||   ||||||||||  | |||| |||| |||||| |||||||| |||||||| |||| |||||||    
T  31296793 tgagtgcggcgttgtgttgttcatcatcttgtgcggcgttgtttgattttgcatcttgttgcagtgttcatttgattcatattgaaaaatcagtttcagt 31296892  T
Q  99 caattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattt 198  Q
    ||||   | |||||||| ||||||| | |||| ||||||||||| |||||| ||| ||||    |||| ||| | |||| |||||| |||||||||||||    
T  31296893 caatccaatattcaattgatgatttagacgtcaacgttgcagatccggaagcatgagtattctggtgatttatattttatcatattgtttgtaggcattt 31296992  T
Q  199 taccgttgtatgctattaacttgggtgttgttagtttgtttgcagtttc 247  Q
    |  |||||||||||||||| |||| || | | |||||||| ||| ||||    
T  31296993 tgtcgttgtatgctattaatttggatgatttgagtttgttcgcattttc 31297041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 243
Target Start/End: Complemental strand, 68090 - 67874
Alignment:
Q  27 gtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttggg 126  Q
    ||||||||||| |||||||||  ||| || | | |||||| |||   |||||| ||||||||| |  ||||||||||| ||||||||  || ||||||      
T  68090 gtcttgtgcggcgtttgatttcgcgttttgtcgtggtgtttgttcagttcctaatgaaagatctacatcagtcaattacaaattcaaccaacgatttgta 67991  T
Q  127 cgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgt 226  Q
    |||  ||||||||||| |||||  |||||||| || | ||||||   |||| |||||||||| |||||||||| |||||||||||||||||||||||||     
T  67990 cgttaacgttgcagatccggaaacatgggtatttcggcgacttaagttttatcatattatttataggcattttgccgttgtatgctattaacttgggtgc 67891  T
Q  227 tgttagtttgtttgcag 243  Q
    ||| |||||||| ||||    
T  67890 tgtgagtttgttcgcag 67874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 8102697 - 8102943
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttat----tgcggtgttcgtttgattcctattgaaagatcaatttca 96  Q
    |||||| ||||||||| ||||| |||||||||||   ||||||||||  | |||| |    ||||||||| ||||| ||| |||||||||||||  ||||    
T  8102697 agtgcaacgttgtgtttttcgtcgtcttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgtttgtttggttcgtattgaaagatcagcttca 8102796  T
Q  97 gtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcag-tgacttagaatttaccatattatttgtaggca 195  Q
    | |||| | ||||||| | ||||||||||||||| ||||||||||| | |||  |||  ||| || | ||| ||||| |||| |||||||||||||||||    
T  8102797 gacaatcacaaattcattcaatgatttgggcgtcaacgttgcagatccagaaacatgaatat-tctgatgatttagattttatcatattatttgtaggca 8102895  T
Q  196 ttttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||| |||| | ||| |||||||||||||| ||| |||||||||||||    
T  8102896 ttttgccgtggaatgttattaacttgggtgctgtgagtttgtttgcag 8102943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 78 - 243
Target Start/End: Original strand, 30776715 - 30776880
Alignment:
Q  78 tattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaattta 177  Q
    |||||||||||||  ||||| |||| | ||||||| | ||||||||||||||  |||||||| ||   |||| ||||||||    |||| ||||| ||||    
T  30776715 tattgaaagatcagcttcagacaatcacaaattcattcaatgatttgggcgtgaacgttgcaaatctagaagcatgggtattctggtgatttagatttta 30776814  T
Q  178 ccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
     ||||||||||||||||||||| |||| | |||||||||||||||||||||| |||||||| ||||    
T  30776815 tcatattatttgtaggcattttgccgtggaatgctattaacttgggtgttgtgagtttgttcgcag 30776880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 12 - 210
Target Start/End: Original strand, 6957136 - 6957334
Alignment:
Q  12 gttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattc 111  Q
    |||||||||||||| || || || ||||||| ||||  |||||| |||| |||||| ||||||| | ||||| ||||| | |||||||||| | | ||||    
T  6957136 gttgtgttgttcgtcgttttatgtggtgtttcatttcacgtcttgttgcagtgttcatttgatttccattgatagatcgacttcagtcaataacagattc 6957235  T
Q  112 aattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatg 210  Q
    ||| |||||||| ||| || |||||| ||||||| || ||||| |||  || ||||||| | |||| || || ||||||||||||||| ||||||||||    
T  6957236 aatcaatgatttaggcatcaacgttgtagattcgaaaatatggatattccaatgacttatattttatcacatgatttgtaggcattttgccgttgtatg 6957334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 28981149 - 28981389
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcggtgtt---tgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcag 97  Q
    |||||| | |||||||||||||||| ||||| |||||||||   ||||||    |||| ||| |||||||||||| ||| |||| |||||| | ||| ||    
T  28981149 ctgagtacggcgttgtgttgttcgtcgtcttctgcggtgttgtttgattttgtatcttgttgtggtgttcgtttggttcatattcaaagattagttttag 28981248  T
Q  98 tcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatt 197  Q
    ||||| | | ||||||| |||||| | | |||| || |||||||| || |||||||||||| |  || | ||||| |||| ||||||  ||||||| |||    
T  28981249 tcaatcacagattcaatcaatgatcttgacgtcaacattgcagatccgaaagtatgggtattttggtcatttagattttatcatattgcttgtaggaatt 28981348  T
Q  198 ttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    ||   |||||||||||||||||| |||||||| ||||||||    
T  28981349 ttgttgttgtatgctattaactttggtgttgtgagtttgtt 28981389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 21 - 235
Target Start/End: Original strand, 30894595 - 30894808
Alignment:
Q  21 ttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatga 120  Q
    ||||| ||||| ||||  |||||||||  ||||||   |||||||||||||  ||| |||||||||||| |  ||||||||||| ||||||||  |||||    
T  30894595 ttcgtcgtcttttgcgacgtttgatttcgcgtcttgccgcggtgttcgtttagttcatattgaaagatcgacatcagtcaattacaaattcaaccaatga 30894694  T
Q  121 tttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaactt 220  Q
    |||||||||| ||||| ||||| | |||| || ||||| ||  ||| ||||  |||| |||||||||||||| |||||| | |||||||||||| |||||    
T  30894695 tttgggcgtcaacgttacagatccagaagcat-ggtatttcgatgaattaggttttatcatattatttgtagtcattttgctgttgtatgctatcaactt 30894793  T
Q  221 gggtgttgttagttt 235  Q
    || || ||| |||||    
T  30894794 ggatgctgtgagttt 30894808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 217
Target Start/End: Complemental strand, 528428 - 528249
Alignment:
Q  38 tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttg 137  Q
    ||||||||||   ||||| |||| ||||| ||||  ||| ||| |||||||||  |||||| ||||| | ||| ||| ||| ||||||||||| ||||||    
T  528428 tgtttgattttgtgtcttgttgcagtgtttgtttcgttcttatcgaaagatcagcttcagtaaattacatatttaatcaattatttgggcgtcaacgttg 528329  T
Q  138 cagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaa 217  Q
    ||||||| |||||||  ||||   ||||| ||||| |||| ||||||||||||||| |||||  ||||||||||||||||    
T  528328 cagattctgaagtataagtattctagtgatttagattttatcatattatttgtaggtattttgtcgttgtatgctattaa 528249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 40 - 238
Target Start/End: Original strand, 9380037 - 9380235
Alignment:
Q  40 tttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgca 139  Q
    ||||||||  |||||| ||||| || | ||||| | | |||||||||| |||||| ||||||| | |  |||||| ||||||||| | ||| | |||| |    
T  9380037 tttgatttcacgtcttgttgcgatgattgtttggtacttattgaaagaccaattttagtcaatcacatgttcaatcaatgatttgtgtgtcaatgttgta 9380136  T
Q  140 gattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    ||||| |||| |||||||| |  |||| ||||| |||| ||||||||||||| |||||||  |||||||| |||||| ||||| |||||| ||||||||    
T  9380137 gattcagaagcatgggtattttggtgatttagattttatcatattatttgtatgcattttgtcgttgtattctattatcttggatgttgtgagtttgtt 9380235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 58 - 225
Target Start/End: Original strand, 1523440 - 1523607
Alignment:
Q  58 tgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggta 157  Q
    ||||||||||||||| ||| |||||||| ||||  || || ||||   || |||||| |||||||||  |||| ||||||||||| | |||| |||||||    
T  1523440 tgcggtgttcgtttggttcgtattgaaatatcagcttgagacaatctcaacttcaatcaatgatttgaacgtcaacgttgcagatccagaagcatgggta 1523539  T
Q  158 tgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtg 225  Q
    |    |||| ||||| |||| |||||||||||||||||||||  ||| | ||||||||||||||||||    
T  1523540 ttctggtgatttagattttatcatattatttgtaggcattttgtcgtggaatgctattaacttgggtg 1523607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 238
Target Start/End: Complemental strand, 7976195 - 7976065
Alignment:
Q  108 attcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgt 207  Q
    ||||||||||| |||||| |||| |||||| |||| |||||| ||||||||    |||| ||| | |||| ||||   |||||||||||||| |||||||    
T  7976195 attcaattaattatttggacgtcaacgttgtagatccggaagcatgggtattctggtgatttaaattttatcataccgtttgtaggcattttgccgttgt 7976096  T
Q  208 atgctattaacttgggtgttgttagtttgtt 238  Q
    ||||||||||||| |||||||| ||||||||    
T  7976095 atgctattaacttaggtgttgtgagtttgtt 7976065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 27097690 - 27097520
Alignment:
Q  68 gtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgac 167  Q
    ||||||||| ||||||||||| | ||| ||||||| ||| ||||||| |||||||||| |||| || ||||| || || ||  |||| ||| |  ||||     
T  27097690 gtttgattcatattgaaagattagttttagtcaatcatagattcaatcaatgatttggacgtcaacattgcaaatccgaaaacatggatattttggtgat 27097591  T
Q  168 ttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    ||||| |||| |||||||| | |||||||||||||   |||||||||||||||| || |||| | ||||||    
T  27097590 ttagattttatcatattatctctaggcattttaccagcgtatgctattaacttgagtattgtgactttgtt 27097520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 9341593 - 9341524
Alignment:
Q  174 tttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||| |||||| ||||||||||||||  |||||||||||||||||||||||||||| |||||||| ||||    
T  9341593 tttatcatattgtttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcag 9341524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 24227837 - 24227724
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaatt 110  Q
    |||||||||||| ||||| ||||| || |||||||||  ||||||||  |||||||| ||| |||| |||||||| ||| | |||||||||||| || ||    
T  24227837 cgttgtgttgtttgttgtgttgtgtggcgtttgatttcacgtcttatcacggtgttcatttaattcatattgaaatatcgacttcagtcaattacaattt 24227738  T
Q  111 caattaatgatttg 124  Q
    |||| |||||||||    
T  24227737 caatcaatgatttg 24227724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 31575585 - 31575509
Alignment:
Q  38 tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaat 114  Q
    |||||||||| ||||||| ||||| ||||||| ||||||||||||||| ||| |||||| ||||||| |||||||||    
T  31575585 tgtttgatttctcgtcttgttgcgatgttcgtctgattcctattgaaaaatcgatttcactcaattacaaattcaat 31575509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 21426622 - 21426564
Alignment:
Q  180 atattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  21426622 atattatttgtagacattttgccgttgtatgctattaacttgggtgctgtgagtttgtt 21426564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 217
Target Start/End: Complemental strand, 1933801 - 1933591
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattata 106  Q
    ||||||||||| | || |||||||||||   ||||||||||   ||||  |||||||||| ||||| ||| |||  ||||||||| |||| ||||| | |    
T  1933801 gcgttgtgttgctagtcgtcttgtgcggcattgtttgattttgtgtctggttgcggtgtttgtttggttcatatcaaaagatcaacttcaatcaatcaca 1933702  T
Q  107 aattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttg 206  Q
     ||||||| |||||||||| |||| ||||||||||| |||||  |||  |||    |||| ||| | |||| |||||||| | || ||||||| | ||||    
T  1933701 gattcaatcaatgatttggacgtcaacgttgcagatccggaaacatgattattctggtgatttatattttatcatattatctatatgcatttttctgttg 1933602  T
Q  207 tatgctattaa 217  Q
    |||||||||||    
T  1933601 tatgctattaa 1933591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 25337574 - 25337652
Alignment:
Q  14 tgtgttgttcgttgtcttgtgcggtgtt---tgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||||| |||||| ||||||||   |||||| ||||||| ||||||||||| |||||||| ||||||||||||    
T  25337574 tgtgttgttcgtcgtcttgcgcggtgttgtttgatttttcgtcttgttgcggtgttcatttgattcatattgaaagatc 25337652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 13546654 - 13546600
Alignment:
Q  163 gtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaa 217  Q
    ||||||||||||||| ||||||||||||||| |||||  ||||||||||||||||    
T  13546654 gtgacttagaatttatcatattatttgtaggtattttgtcgttgtatgctattaa 13546600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 35001596 - 35001676
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatt 93  Q
    |||||||||| |||||||||||   |||||| |||  |||||| ||||||||||| ||| |||||||||||||||||||||    
T  35001596 tgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatcaatt 35001676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 11321546 - 11321461
Alignment:
Q  39 gtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttg 124  Q
    |||||||||  |||||| ||| |||||||||||  |||||||||||||||| |  ||||||||||| ||||||||| ||| |||||    
T  11321546 gtttgatttcacgtcttgttgtggtgttcgtttagttcctattgaaagatcgacatcagtcaattacaaattcaatcaattatttg 11321461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 14175013 - 14174944
Alignment:
Q  174 tttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||| ||||||||||||||||||||| ||||| |||||| |||||||| ||| ||| |||||||| ||||    
T  14175013 tttatcatattatttgtaggcatttttccgttttatgctgttaacttgagtgatgtgagtttgttcgcag 14174944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 14179549 - 14179480
Alignment:
Q  174 tttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||| ||||||||||||||||||||| ||||| |||||| |||||||| ||| ||| |||||||| ||||    
T  14179549 tttatcatattatttgtaggcatttttccgttttatgctgttaacttgagtgatgtgagtttgttcgcag 14179480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 14846174 - 14846113
Alignment:
Q  163 gtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggt 224  Q
    |||||||||  |||| ||||||||||||||||||||| | ||| ||||||||||||||||||    
T  14846174 gtgacttaggttttatcatattatttgtaggcattttgctgttttatgctattaacttgggt 14846113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 32802683 - 32802756
Alignment:
Q  163 gtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttg 236  Q
    |||||||| | |||| ||||||||||||||| |||||| ||||||||| |||||| ||||||| ||| ||||||    
T  32802683 gtgacttaaattttatcatattatttgtaggtattttatcgttgtatgatattaaattgggtgctgtgagtttg 32802756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 8496973 - 8497049
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    ||||||||||  ||||||||||   |||||||||| |||||||  |||||||||| |||||||| ||||||||||||    
T  8496973 tgttgttcgtcatcttgtgcggcgttgtttgatttctcgtcttcgtgcggtgttcatttgattcatattgaaagatc 8497049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 13546777 - 13546683
Alignment:
Q  2 tgagtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttca 96  Q
    ||||||| |||||||||||||||| ||||| ||||| |||||||||  || ||| |||  |||||||||||  || | |||||||||||| ||||    
T  13546777 tgagtgcggcgttgtgttgttcgtcgtcttatgcggcgtttgattttgcgccttgttgtagtgttcgtttggatcattttgaaagatcaacttca 13546683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 23947389 - 23947313
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||   ||||||||||  | |||| ||||||||||| |||||||| ||||||||||||    
T  23947389 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccatctttttgcggtgttcatttgattcatattgaaagatc 23947313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 17334920 - 17334977
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| | ||||| |||||||||||||||| |||||| |||||||| ||||    
T  17334920 tttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcag 17334977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 35001757 - 35001814
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| | ||||| |||||||||||||||| |||||| |||||||| ||||    
T  35001757 tttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcag 35001814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 23947227 - 23947175
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||| | ||||| |||||||||||||||| |||||| ||||||||    
T  23947227 tttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgtt 23947175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 8497129 - 8497192
Alignment:
Q  180 atattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||| |||||||||||| | ||||| |||||||||||||||| || ||| |||||||| ||||    
T  8497129 atattttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcag 8497192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 217
Target Start/End: Complemental strand, 31852231 - 31852092
Alignment:
Q  78 tattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaattta 177  Q
    |||||||||||||| |||||||||  | | ||| ||| |||||||||  |||| | ||||||||| |||||| ||| ||||    |||| ||| | ||||    
T  31852231 tattgaaagatcaacttcagtcaaccacagattaaatcaatgatttgaacgtcaaagttgcagatccggaagcatgagtattctggtgatttaaatttta 31852132  T
Q  178 ccatattatttgtaggcattttaccgttgtatgctattaa 217  Q
     |||||||||| ||| ||||||   |||||||||||||||    
T  31852131 tcatattatttatagacattttgttgttgtatgctattaa 31852092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 32060030 - 32060093
Alignment:
Q  180 atattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||||||||||||||||  | || ||||||||||| |||| |||||| |||||||| ||||    
T  32060030 atattatttgtaggcattttgtcattttatgctattaaattggatgttgtaagtttgttcgcag 32060093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 4984638 - 4984562
Alignment:
Q  16 tgttgttcgttgtcttgtgcggtgtt---tgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||||||   ||||||  ||||||  || ||||||| |||||||| ||||||||||||    
T  4984638 tgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcgtgaggtgttcatttgattcatattgaaagatc 4984562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 8266646 - 8266702
Alignment:
Q  14 tgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttc 67  Q
    |||||| |||||||||||||||||   |||||||||| ||||||||||| |||||||    
T  8266646 tgtgttattcgttgtcttgtgcggcgttgtttgatttgtcgtcttattgaggtgttc 8266702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20220853 - 20220899
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgattt 47  Q
    |||||||| ||||| |||||||||| ||||||||||| |||||||||    
T  20220853 ctgagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgattt 20220899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22114837 - 22114883
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgattt 47  Q
    |||||||| ||||| |||||||||| ||||||||||| |||||||||    
T  22114837 ctgagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgattt 22114883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 25064242 - 25064318
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||   ||||||||||  ||| ||  |||||||||| |||||||| ||||||||||||    
T  25064242 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgttttcgtgcggtgttcatttgattcatattgaaagatc 25064318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 28635192 - 28635112
Alignment:
Q  16 tgttgttcgttgtcttgtgcggtgtt---tgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatt 93  Q
    |||||||||| ||||||| |||||||   |||||| |||| |  ||||||||||| |||||||| ||||||||||| ||||    
T  28635192 tgttgttcgtcgtcttgtacggtgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaaagattaatt 28635112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 33110617 - 33110693
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||| | |||||||||||   |||||||||| |||||||  |||||||||| |||||||| |||| |||||||    
T  33110617 tgttgttcatcgtcttgtgcggtgttgtttgatttctcgtcttcgtgcggtgttcatttgattcatattaaaagatc 33110693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 238
Target Start/End: Original strand, 679133 - 679320
Alignment:
Q  50 cgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaag 149  Q
    |||||| ||| ||| |||||||| ||  ||||||||| ||| ||||||||||| | | ||||||| ||||||||| ||| | || ||||| ||  |||||    
T  679133 cgtcttgttgtggtattcgtttggtttttattgaaaggtcagtttcagtcaatcacatattcaatcaatgatttgagcgccaactttgcaaatctggaag 679232  T
Q  150 tatgggtatgtcagt-gacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
     |||  ||| || |  || ||||| |||| ||||||||| | |  |||||| | |||||||||||||||||| |||||||| ||||||||    
T  679233 catgaatat-tctgacgatttagattttatcatattattcgcaaacattttgc-gttgtatgctattaacttaggtgttgtgagtttgtt 679320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 12653111 - 12653168
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||| ||||| | ||||| |||||||||||||||| |||||| |||||||| ||||    
T  12653111 tttgtacgcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcag 12653168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 16892726 - 16892669
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| | ||||| |||||||||||||||| ||| || |||||||| ||||    
T  16892726 tttgtaggcattatgccgttatatgctattaacttggatgtcgtaagtttgttcgcag 16892669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 25064403 - 25064460
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| |  |||| |||||||||||||||| |||||| |||||||| ||||    
T  25064403 tttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcag 25064460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 28635023 - 28634971
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||| | ||||| ||||| |||||||||| |||||| ||||||||    
T  28635023 tttgtaggcattatgccgttatatgcgattaacttggatgttgtgagtttgtt 28634971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 115
Target Start/End: Complemental strand, 30140627 - 30140523
Alignment:
Q  17 gttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattga---aagatcaatttcagtcaattataaatt 110  Q
    ||||||| | |||||||||||   || |||||||  |||||| |||| |||||||||||||||| |||||   |||||||| || ||||||| ||| |||    
T  30140627 gttgttcatcgtcttgtgcggcattgcttgatttcacgtcttgttgcagtgttcgtttgattcccattgaaagaagatcaactttagtcaatcatagatt 30140528  T
Q  111 caatt 115  Q
    |||||    
T  30140527 caatt 30140523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 47
Target Start/End: Original strand, 32059894 - 32059930
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcggtgtttgattt 47  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  32059894 cgttgtgttgttcgtcgtcttgtgcggcgtttgattt 32059930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 33110778 - 33110834
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgca 242  Q
    |||||||||||| |  |||| |||||||||||||||| |||||| ||||| ||||||    
T  33110778 tttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttatttgca 33110834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 1e-56; HSPs: 89)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 16 - 243
Target Start/End: Original strand, 23230634 - 23230861
Alignment:
Q  16 tgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaatt 115  Q
    |||||||||| ||||||||||| |||||||||  |||||| | |||||||| ||||  ||||||||| |||||| |  ||||||||||| ||||||||      
T  23230634 tgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattacaaattcaacc 23230733  T
Q  116 aatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctatt 215  Q
    ||||| ||||||||| ||||||||||| |||||| |||||||| || |||||||||  |||| |||||||||||||||||||||  ||||||||||||||    
T  23230734 aatgacttgggcgtcaacgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcattttgtcgttgtatgctatt 23230833  T
Q  216 aacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||| |||||||| ||||    
T  23230834 aacttgggtgttgtgagtttgttcgcag 23230861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 12 - 247
Target Start/End: Original strand, 3673428 - 3673663
Alignment:
Q  12 gttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattc 111  Q
    |||||||||||||| ||||| |||||||||||||||   ||||| ||||||||||| |||  |||||||||||||||| |  ||||||||||| ||||      
T  3673428 gttgtgttgttcgtcgtcttatgcggtgtttgatttcgtgtcttgttgcggtgttcctttagttcctattgaaagatcgacatcagtcaattacaaatca 3673527  T
Q  112 aattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgc 211  Q
    ||| |||| |||||||||| ||||||||||| |||||| ||| |||| |||||||||||   || | ||||||||||||||||||||| ||||||||| |    
T  3673528 aatcaatgctttgggcgtcaacgttgcagatccggaagcatgagtatttcagtgacttaagtttaatcatattatttgtaggcattttgccgttgtatcc 3673627  T
Q  212 tattaacttgggtgttgttagtttgtttgcagtttc 247  Q
    ||||||||||| || ||| |||||||||||||||||    
T  3673628 tattaacttggatgctgtgagtttgtttgcagtttc 3673663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 32 - 243
Target Start/End: Complemental strand, 31013690 - 31013479
Alignment:
Q  32 gtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcg 131  Q
    |||||| |||||||||  | |||| | |||||||| |||   |||||||||||| ||| |  ||||||||||| ||||||||| |||||||||| ||||     
T  31013690 gtgcggcgtttgatttcgcatcttgtcgcggtgtttgttcagttcctattgaaatatctacatcagtcaattaaaaattcaatcaatgatttggacgtca 31013591  T
Q  132 acgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgtta 231  Q
    |||||||||||||||||| ||| |||| |||||||||||   |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  31013590 acgttgcagattcggaagcatgtgtatttcagtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtga 31013491  T
Q  232 gtttgtttgcag 243  Q
    ||||||| ||||    
T  31013490 gtttgttcgcag 31013479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 16 - 238
Target Start/End: Original strand, 5046744 - 5046966
Alignment:
Q  16 tgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaatt 115  Q
    |||||||||| || |||||||| |||||||||  |  ||| ||  ||| |||||||| |||||||||||| ||||| |||||||||||| | |||||||     
T  5046744 tgttgttcgtcgtattgtgcggcgtttgatttcacaccttgttttggtattcgtttggttcctattgaaaaatcaaattcagtcaattacagattcaatc 5046843  T
Q  116 aatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctatt 215  Q
    ||| |||||| ||||||||||||||||||  ||  |||  ||| |||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||    
T  5046844 aataatttggacgtcgacgttgcagattcataaacatgaatatttcagtgacttagaatttatcatattatttgtaggcattttatcgttgtatgttatt 5046943  T
Q  216 aacttgggtgttgttagtttgtt 238  Q
    |||||||||| ||| ||||||||    
T  5046944 aacttgggtgatgtgagtttgtt 5046966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 4 - 236
Target Start/End: Original strand, 10377668 - 10377900
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||  ||||||||||| |||||||||  ||| || | | |||||| |||   |||||||||||||||| |  ||||||||||    
T  10377668 agtgcggcgttgtgttgttcgccgtcttgtgcggcgtttgatttcgcgttttgtcgtggtgtttgttcagttcctattgaaagatctacatcagtcaatt 10377767  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    ||||||||||  |||||||||| | || ||||||||||| |||||| |||||||| || | ||||||   |||| ||||||||||||||||||||| |||    
T  10377768 ataaattcaaccaatgatttggacatcaacgttgcagatccggaagcatgggtatttcggcgacttaagttttatcatattatttgtaggcattttgccg 10377867  T
Q  204 ttgtatgctattaacttgggtgttgttagtttg 236  Q
    |||||||||||||||||||||| ||| ||||||    
T  10377868 ttgtatgctattaacttgggtgctgtgagtttg 10377900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 7883351 - 7883112
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||  |||||| | |||||||| |||   ||| |||||||||||| |  | | ||||||    
T  7883351 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcacgtcttgtcgcggtgtttgttcagttcatattgaaagatctacattaatcaatt 7883252  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  ||| |||||| ||||  |||||||||| |||||| |||||||| || |||||||||  |||| ||||||||||||||||||||| |||    
T  7883251 acaaattcaagcaataatttggacgtcagcgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcattttgccg 7883152  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||| ||||||||||||||| ||| |||||||| ||||    
T  7883151 ttgtatcctattaacttgggtgctgtgagtttgttcgcag 7883112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 12 - 247
Target Start/End: Complemental strand, 9637511 - 9637276
Alignment:
Q  12 gttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattc 111  Q
    |||||||||||||| ||||||| ||   ||||||||  ||||||||||| || |||||||  ||||||||||||||||||  ||||| ||||| |||  |    
T  9637511 gttgtgttgttcgtcgtcttgtacgacatttgatttcgcgtcttattgcagtattcgtttagttcctattgaaagatcaacatcagttaattacaaacac 9637412  T
Q  112 aattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgc 211  Q
    ||||||||||||| ||||| |||||||||||||||||  ||| |||| || || ||||||  |||| |||||||||| ||||||||||  ||||||||||    
T  9637411 aattaatgatttgagcgtcaacgttgcagattcggaaacatgagtatttcggtaacttaggttttatcatattatttttaggcattttgtcgttgtatgc 9637312  T
Q  212 tattaacttgggtgttgttagtttgtttgcagtttc 247  Q
    |||||||||||||||| | |||||||| | ||||||    
T  9637311 tattaacttgggtgttatgagtttgttcgtagtttc 9637276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 238
Target Start/End: Complemental strand, 16247333 - 16247099
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||| | ||||||||||  |||||||||  |||||| | |||||||||||||  ||||||| |||||||| |  ||| | ||||    
T  16247333 agtgcggcgttgtgttgttcatcgtcttgtgcgacgtttgatttcacgtcttgtcgcggtgttcgtttagttcctatggaaagatcgacatcaattaatt 16247234  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||| |||||||||||| || | ||||||||| |||||| |||||||| ||  ||||||||| || | ||||||||||| ||||||||| |||    
T  16247233 acaaattcaatcaatgatttgggcatcaatgttgcagatccggaagcatgggtatttcgctgacttagatttgatcatattatttgaaggcattttgccg 16247134  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||||||| |||||| || ||||||||    
T  16247133 ttgtatgctattaactcgggtgtagtaagtttgtt 16247099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 4 - 221
Target Start/End: Complemental strand, 20553351 - 20553134
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||| |||||||||| ||||| ||||| |||||||||   ||||| | |||||||| |||   |||||||||||||||| || ||| ||||||    
T  20553351 agtgcggcgttttgttgttcgtcgtcttatgcggcgtttgattttgtgtcttgtcgcggtgtttgttcagttcctattgaaagatctatatcaatcaatt 20553252  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| ||||||||||| |||||| ||| |||| || |||||||||  |||| ||||||||||||||||||||| |||    
T  20553251 acaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaggttttatcatattatttgtaggcattttgccg 20553152  T
Q  204 ttgtatgctattaacttg 221  Q
    ||||||||||||||||||    
T  20553151 ttgtatgctattaacttg 20553134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 6 - 238
Target Start/End: Complemental strand, 27110573 - 27110341
Alignment:
Q  6 tgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattat 105  Q
    ||||||||||||||| | || |||||||| || |||||||||  |||||| | || ||||||||||  ||| | |||||||||  |  |||| ||| ||     
T  27110573 tgcagcgttgtgttggtagtcgtcttgtgtggcgtttgattttgcgtcttgtcgcagtgttcgtttagttcatgttgaaagattgacatcagacaactac 27110474  T
Q  106 aaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgtt 205  Q
    ||||||||| ||||||||| ||||| |||||||||||  ||||| ||| |||| | ||||||||||| |||| |||||||||||||| ||||||| ||||    
T  27110473 aaattcaatcaatgatttgagcgtcaacgttgcagatctggaagcatgtgtattttagtgacttagattttatcatattatttgtagacattttatcgtt 27110374  T
Q  206 gtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||||||||||||||| ||||||||    
T  27110373 gtatgctattaacttgggtgttgtgagtttgtt 27110341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 27 - 243
Target Start/End: Complemental strand, 33347607 - 33347392
Alignment:
Q  27 gtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttggg 126  Q
    |||||||| || |||||||||   ||||| ||||||||||| |||||| |||||||||||||||| |||||||||| | | ||||||| |||||||| ||    
T  33347607 gtcttgtgtggcgtttgatttcatgtcttgttgcggtgttcatttgat-cctattgaaagatcaacttcagtcaatcacagattcaatcaatgatttagg 33347509  T
Q  127 cgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgt 226  Q
    |||||||||||| ||| || ||| |||||||| || |||||| |||||||| |||||||||||||||||||||  | |||||||||||||| || |||||    
T  33347508 cgtcgacgttgcggatccgaaagcatgggtatttcggtgactcagaatttatcatattatttgtaggcattttgtcattgtatgctattaaattaggtgt 33347409  T
Q  227 tgttagtttgtttgcag 243  Q
    | | |||||||| ||||    
T  33347408 tatgagtttgttcgcag 33347392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 37971262 - 37971501
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||| |||||||||| ||||||||||| |||||||||  | | || | | |||||| |||   |||||||||||||||| |  ||| ||||||    
T  37971262 agtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgctttttttcgtggtgtttgttcagttcctattgaaagatctacatcaatcaatt 37971361  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| ||||||||||| |||||  ||| |||| || |||||||||  |||| || |||||||||||||||||| |||    
T  37971362 acaaattcaagcaatgatttggacgtcaacgttgcagatccggaaacatgagtatttcggtgacttaggttttatcacattatttgtaggcattttgccg 37971461  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||||||||||||| |||||||| ||||    
T  37971462 ttgtatgctattaacttgggtgttgtgagtttgttcgcag 37971501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 10 - 238
Target Start/End: Complemental strand, 7677387 - 7677159
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    |||||||||||||||| ||||||||| |  ||||||||  |||||| | |||||||||||||| |||||| ||||| |||||  ||||||||||| | ||    
T  7677387 gcgttgtgttgttcgtcgtcttgtgctgcatttgatttcgcgtcttgtcgcggtgttcgtttggttcctactgaaatatcaacatcagtcaattacagat 7677288  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    || |  ||||||||| ||||| ||||||||||| |||||| |||  ||| || |||||||||  |||| ||||||||||||| ||||||| |||||||||    
T  7677287 tcgaccaatgatttgagcgtcaacgttgcagatccggaagcatgaatatttcggtgacttaggttttatcatattatttgtaagcattttgccgttgtat 7677188  T
Q  210 gctattaacttgggtgttgttagtttgtt 238  Q
    | |||||||||||||| ||| | ||||||    
T  7677187 gttattaacttgggtgctgtgactttgtt 7677159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 28897695 - 28897927
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaatt 110  Q
    |||||||||||| ||  || |||| || |||||||||  |||||| | | |||||||||||  |||||||||||||||| |  |||||||||||||| ||    
T  28897695 cgttgtgttgttagtcatcgtgtgtggcgtttgatttcgcgtcttgtcgtggtgttcgtttagttcctattgaaagatcgacatcagtcaattataagtt 28897794  T
Q  111 caattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatg 210  Q
    |||||||||||||||||||  ||||||||||| ||||||||| |  || ||  ||||||||| |||| |||||||||||||| ||||||  | || ||||    
T  28897795 caattaatgatttgggcgtaaacgttgcagatacggaagtattgaaatttcgatgacttagattttatcatattatttgtagtcattttgtcattctatg 28897894  T
Q  211 ctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||| |||||||||| |||||||| ||||    
T  28897895 ctattaacgtgggtgttgtgagtttgttcgcag 28897927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 4 - 221
Target Start/End: Complemental strand, 20559854 - 20559637
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    |||||| |||| |||||||||| |||||||||||  ||||||||   |||||   |||||||| |||   |||||||||||||||| || ||| ||||||    
T  20559854 agtgcatcgttttgttgttcgtcgtcttgtgcggcctttgattttgtgtcttggcgcggtgtttgttcagttcctattgaaagatctatatcaatcaatt 20559755  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| ||||||||||| |||||| ||| |||| || |||||||||  |||| |||||||||||| |||||||| |||    
T  20559754 acaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaggttttatcatattatttgtgggcattttgccg 20559655  T
Q  204 ttgtatgctattaacttg 221  Q
    ||||||||||||||||||    
T  20559654 ttgtatgctattaacttg 20559637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 4 - 221
Target Start/End: Complemental strand, 20571416 - 20571199
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    |||||| |||| |||||||||| |||||||||||  ||||||||   |||||   |||||||| |||   |||||||||||||||| || ||| ||||||    
T  20571416 agtgcatcgttttgttgttcgtcgtcttgtgcggcctttgattttgtgtcttggcgcggtgtttgttcagttcctattgaaagatctatatcaatcaatt 20571317  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| ||||||||||| |||||| ||| |||| || |||||||||  |||| |||||||||||| |||||||| |||    
T  20571316 acaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaggttttatcatattatttgtgggcattttgccg 20571217  T
Q  204 ttgtatgctattaacttg 221  Q
    ||||||||||||||||||    
T  20571216 ttgtatgctattaacttg 20571199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 5333402 - 5333621
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcggtgtt---tgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcag 97  Q
    |||||||| | |||||||||||||| |||||||||||||||   ||||||  |||||| || ||||||||||||| |||||||||||||||||| |||||    
T  5333402 ctgagtgcggtgttgtgttgttcgtcgtcttgtgcggtgttgtttgattttgcgtcttgttccggtgttcgtttggttcctattgaaagatcaacttcag 5333501  T
Q  98 tcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatt 197  Q
    ||||| | | ||||||| ||| ||||||||||| |||||| |||| | |||| ||| ||||   ||||| ||||| |||  ||||||||||||| |||||    
T  5333502 tcaatcacatattcaatcaattatttgggcgtcaacgttgtagatccagaagcatgagtattctagtgatttagattttgtcatattatttgtatgcatt 5333601  T
Q  198 ttaccgttgtatgctattaa 217  Q
    ||   |||||||||||||||    
T  5333602 ttgttgttgtatgctattaa 5333621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 15344285 - 15344526
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgt---ttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtca 100  Q
    |||||| | ||||||||||||| ||||||||||| ||   |||||||  | |||| |||||||||||||| | ||| |||||||||||||| ||||||||    
T  15344285 agtgcaaccttgtgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtgttcgttgg-ttcatattgaaagatcaagttcagtca 15344383  T
Q  101 attataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatttta 200  Q
    || | | ||||||| |||||||||| |||| ||||||||||| | |||| | | ||||    |||| ||||| | || |||||||||||||||||||||     
T  15344384 atcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatattatttgtaggcattttg 15344483  T
Q  201 ccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
     |||||||||||||||||||||||| ||| |||||||| ||||    
T  15344484 tcgttgtatgctattaacttgggtgctgtgagtttgttcgcag 15344526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 15433350 - 15433591
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgt---ttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtca 100  Q
    |||||| | ||||||||||||| ||||||||||| ||   |||||||  | |||| |||||||||||||| | ||| |||||||||||||| ||||||||    
T  15433350 agtgcaaccttgtgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtgttcgttgg-ttcatattgaaagatcaagttcagtca 15433448  T
Q  101 attataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatttta 200  Q
    || | | ||||||| |||||||||| |||| ||||||||||| | |||| | | ||||    |||| ||||| | || |||||||||||||||||||||     
T  15433449 atcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatattatttgtaggcattttg 15433548  T
Q  201 ccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
     |||||||||||||||||||||||| ||| |||||||| ||||    
T  15433549 tcgttgtatgctattaacttgggtgctgtgagtttgttcgcag 15433591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 15524654 - 15524895
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgt---ttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtca 100  Q
    |||||| | ||||||||||||| ||||||||||| ||   |||||||  | |||| |||||||||||||| | ||| |||||||||||||| ||||||||    
T  15524654 agtgcaaccttgtgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtgttcgttgg-ttcatattgaaagatcaagttcagtca 15524752  T
Q  101 attataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatttta 200  Q
    || | | ||||||| |||||||||| |||| ||||||||||| | |||| | | ||||    |||| ||||| | || |||||||||||||||||||||     
T  15524753 atcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatattatttgtaggcattttg 15524852  T
Q  201 ccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
     |||||||||||||||||||||||| ||| |||||||| ||||    
T  15524853 tcgttgtatgctattaacttgggtgctgtgagtttgttcgcag 15524895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 243
Target Start/End: Complemental strand, 1236800 - 1236568
Alignment:
Q  13 ttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    |||||||||||||||||||||||||   ||||||||||  | |||| |||||||||||||| | ||| |||||||||||||| |||||||||| | | ||    
T  1236800 ttgtgttgttcgttgtcttgtgcggcgttgtttgatttggcatcttgttgcggtgttcgttgg-ttcatattgaaagatcaacttcagtcaatcacatat 1236702  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||| |||||| ||| |||| ||||||||||| | |||| | | ||||    |||| ||||| | || |||| ||||| |||||||||| |||||||||    
T  1236701 tcaatcaatgatctggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatactatttttaggcattttgccgttgtat 1236602  T
Q  210 gctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||| ||| |||||||| ||||    
T  1236601 gctattaacttgggtgctgtgagtttgttcgcag 1236568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 243
Target Start/End: Complemental strand, 24186762 - 24186532
Alignment:
Q  12 gttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattc 111  Q
    ||||||||||| ||||||||||| ||  ||||||||  ||| || | | | |||||||||  ||||||||||| |||  |  |||||||||||||| |||    
T  24186762 gttgtgttgttagttgtcttgtgtggcatttgatttcgcgttttgtcgtgatgttcgtttagttcctattgaa-gattgacatcagtcaattataagttc 24186664  T
Q  112 aattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgc 211  Q
    ||| ||| ||||||||||| ||||||||||| || ||| |||||||| ||||||||||| | |||| |||||||||| |||||||||| |||| |||| |    
T  24186663 aatcaataatttgggcgtcaacgttgcagatccgaaagcatgggtatttcagtgacttaaattttatcatattatttataggcattttgccgtcgtatac 24186564  T
Q  212 tattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||||| |||||| | |||||||| ||||    
T  24186563 tattaacttaggtgttatgagtttgttagcag 24186532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 238
Target Start/End: Complemental strand, 45445914 - 45445687
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaatt 110  Q
    |||||| |||||||| ||||||||||| |||||||||  | | || | |||||||| ||||  ||||||||||||||||    ||||||||||| |||||    
T  45445914 cgttgtattgttcgtcgtcttgtgcggcgtttgatttcgcattttgtcgcggtgtttgtttatttcctattgaaagatcggcatcagtcaattacaaatt 45445815  T
Q  111 caattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatg 210  Q
    |||  ||||||||||||||| |||||| | || |||||| ||| | || |  |||||||||| |||| |||||||||||||||||||||   ||| ||||    
T  45445814 caaccaatgatttgggcgtcaacgttgaaaatccggaagcatgtgaattttggtgacttagattttatcatattatttgtaggcattttgttgttttatg 45445715  T
Q  211 ctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||| |||||| ||||||||    
T  45445714 ctattaacttggatgttgtgagtttgtt 45445687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 77 - 243
Target Start/End: Complemental strand, 16928794 - 16928628
Alignment:
Q  77 ctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaattt 176  Q
    ||||||||||||| |  ||||||||||| ||||||||  |||||||||| | || ||||||||||| || |||  ||||||| || |||||||||  |||    
T  16928794 ctattgaaagatcgacatcagtcaattacaaattcaaccaatgatttggacatcaacgttgcagatccgaaagcgtgggtatttcggtgacttaggtttt 16928695  T
Q  177 accatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    | ||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||| ||||    
T  16928694 atcatattatttgtaggcattttgccattgtatgctattaacttgggtgttgtgagtttgttcgcag 16928628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 61 - 243
Target Start/End: Complemental strand, 18890752 - 18890570
Alignment:
Q  61 ggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgt 160  Q
    |||||||||||| ||| |||||||||||||  ||||| |||| | ||||||||| ||||||||||||||| ||||||||||| | |||  || |||||      
T  18890752 ggtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaaacataggtatta 18890653  T
Q  161 cagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
      |||| ||||| |||| |||||||||||||||||||||  |||||||||||||||||||||||| ||| |||||||| ||||    
T  18890652 tggtgatttagattttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcag 18890570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 25191173 - 25190936
Alignment:
Q  8 cagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataa 107  Q
    |||||||||||||||||| ||||||||||| |||||||||  | | || | |||||||| ||||  |||||||||||||||||   |||||||||||| |    
T  25191173 cagcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgctttttgtcgcggtgtttgtttatttcctattgaaagatcagcatcagtcaattatga 25191074  T
Q  108 attcaattaatgat--ttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgtt 205  Q
    ||||||  ||||||  ||||||||| |||||| |||| |||||| ||| | ||  |  ||||||||  |||| ||||||||||||||||||||| |  ||    
T  25191073 attcaaccaatgatatttgggcgtcaacgttgaagatccggaagcatgtgaattgcgatgacttaggttttatcatattatttgtaggcatttttctatt 25190974  T
Q  206 gtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
     ||||||||||||||||||| ||| |||||||| ||||    
T  25190973 ttatgctattaacttgggtgctgtgagtttgttcgcag 25190936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 12 - 249
Target Start/End: Complemental strand, 29617379 - 29617139
Alignment:
Q  12 gttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaa 108  Q
    |||||||||||||| |||||||||||   ||||||||||  |||||| |||||||||||||||| ||| |||||||||| ||| |||||||||| | | |    
T  29617379 gttgtgttgttcgtcgtcttgtgcggcgctgtttgatttcgcgtcttgttgcggtgttcgtttggttcttattgaaagaccaacttcagtcaatcacaga 29617280  T
Q  109 ttcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgta 208  Q
    |||||| |||||||||| |||| ||||||||||| |  ||  || | |||    |||| ||||| |||| |||||||||||||||||||||   ||||||    
T  29617279 ttcaatcaatgatttggacgtcaacgttgcagatccataaacattgttattctggtgatttagattttatcatattatttgtaggcattttgttgttgta 29617180  T
Q  209 tgctattaacttgggtgttgttagtttgtttgcagtttcgc 249  Q
    ||||||||||||   |||||| |||||||| |||| |||||    
T  29617179 tgctattaacttaaatgttgtgagtttgttcgcagattcgc 29617139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 41896550 - 41896735
Alignment:
Q  58 tgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggta 157  Q
    ||||||||||||||| ||| |||||||||||||  ||||| |||| | |||||||||||||||||| ||| || |||||||||||   |||| ||| |||    
T  41896550 tgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaattcaattaatgatttaggcatcaacgttgcagatctagaagcatgagta 41896649  T
Q  158 tgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |    |||| ||||| || | |||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||| ||||    
T  41896650 ttctggtgatttagatttcatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcag 41896735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 10 - 238
Target Start/End: Complemental strand, 40211406 - 40211178
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    |||||||||||||||| ||||| ||| |||||||||||  ||| || | |||||||| ||||  || ||||||||||||| |  |||||| |||| ||||    
T  40211406 gcgttgtgttgttcgtcgtcttatgcagtgtttgatttcgcgtattgtcgcggtgtttgtttagtttctattgaaagatctacatcagtcgattacaaat 40211307  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    || |  ||||||||||||||| |||||| |||| |||||| ||| |||| ||  |||||| || |||| ||||||||||||| ||||| | |||||||||    
T  40211306 tccaccaatgatttgggcgtcaacgttgtagatccggaagcatgagtatttcgttgacttggattttatcatattatttgtaagcattatgccgttgtat 40211207  T
Q  210 gctattaacttgggtgttgttagtttgtt 238  Q
    ||||||||  |||||| ||| ||||||||    
T  40211206 gctattaatctgggtgatgtgagtttgtt 40211178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 238
Target Start/End: Complemental strand, 471276 - 471040
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||| |||||||||||| |||| |||||  |||||||||   ||||| |||||||| ||||||| ||| |||||||||||||  |||| |||||     
T  471276 agtgcggcgctgtgttgttcgtcgtctggtgcgacgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatc 471177  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcag-tgacttagaatttaccatattatttgtaggcattttac- 201  Q
    ||| ||||||| ||||||||| ||||| ||||||||||| |||||| |||||||| || | ||| ||||| |||| |||||||||||||||||||||       
T  471176 atagattcaatcaatgatttgtgcgtcaacgttgcagatccggaagcatgggtat-tctgatgatttagattttatcatattatttgtaggcattttttg 471078  T
Q  202 -cgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
     || |||||| |||||||||||||| ||| | ||||||    
T  471077 tcgatgtatgttattaacttgggtgatgtgattttgtt 471040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 243
Target Start/End: Complemental strand, 27498465 - 27498237
Alignment:
Q  13 ttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattca 112  Q
    ||||||||||||| ||||||||||   ||||||||  |||||| | | ||||||| ||| ||||||||||||||||||| ||||||  | || |||||||    
T  27498465 ttgtgttgttcgtcgtcttgtgcgacatttgatttcgcgtcttgtcgtggtgttcatttaattcctattgaaagatcaacttcagt-tagtacaaattca 27498367  T
Q  113 attaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgct 212  Q
    |||||||||||||||||| || ||||||||| ||||  || ||||| ||||||| ||||| |||| |||||||||| ||| ||||||  | || |||| |    
T  27498366 attaatgatttgggcgtcaacattgcagatttggaaacat-ggtatttcagtgatttagattttatcatattatttatagacattttgtctttatatgtt 27498268  T
Q  213 attaacttgggtgttgttagtttgtttgcag 243  Q
    || |||||||||||| | || ||||||||||    
T  27498267 atgaacttgggtgttatgagcttgtttgcag 27498237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 243
Target Start/End: Complemental strand, 14545007 - 14544766
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    ||||||| ||||| || |||||||| || |||||||||  |||||| | ||||||||| |||  |||||||||||||||| |  ||| ||||||| || |    
T  14545007 gcgttgttttgttagtcgtcttgtgtggcgtttgatttcacgtcttgtcgcggtgttcatttagttcctattgaaagatcgacatcaatcaattacaagt 14544908  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattattt--------gtaggcattttac 201  Q
    | ||| ||| ||||||||||| ||||||||||| |||||| ||||| || || |||||||| | |||| ||||||||||        ||||||||||| |    
T  14544907 taaatcaattatttgggcgtcaacgttgcagatccggaagcatgggaatttcggtgacttaaattttatcatattatttgtagtcttgtaggcattttgc 14544808  T
Q  202 cgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||| |||||||||||||| || ||| |||||||||||||    
T  14544807 cgttgtttgctattaacttggatggtgtgagtttgtttgcag 14544766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 40619183 - 40618944
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||||||||||| || |||||||| |  |||||||||   ||||||| ||||||||| |||  ||| |||| ||||||| |    ||||||||    
T  40619183 agtgcggcgttgtgttgtttgtcgtcttgtgtgacgtttgatttcgtgtcttatcgcggtgttcatttagttcttattcaaagatcgacaatagtcaatt 40619084  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||| ||| ||||||||||| ||||||||||| | |||| ||| |||| ||   |||||| | |||| |||||||| |||| ||||||| |||    
T  40619083 acaaattcaatcaataatttgggcgtcaacgttgcagatccagaagcatgagtatttcgcagacttaaattttatcatattatgtgtatgcattttgccg 40618984  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||||||| |||||  ||||||| ||||    
T  40618983 ttgtatgctattaacttgggggttgtgcgtttgttcgcag 40618944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 236
Target Start/End: Complemental strand, 17693716 - 17693491
Alignment:
Q  12 gttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattc 111  Q
    ||||| ||||||||  |||||||||| |||||||||  ||| || | |||||||| ||||  |||||||| ||||||| |  ||||||||||| ||||||    
T  17693716 gttgtattgttcgtcttcttgtgcggcgtttgattttgcgttttgtcgcggtgtttgtttagttcctattaaaagatcgacatcagtcaattacaaattc 17693617  T
Q  112 aattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttacc-gttgtatg 210  Q
    ||  ||||||||||||||| || |||||||| |||||| ||| |||| ||  |||||||   |||| |||||||||||||||||||||    ||||||||    
T  17693616 aaccaatgatttgggcgtcaacattgcagatccggaagcatgagtatttcgatgacttatgttttatcatattatttgtaggcatttttgttgttgtatg 17693517  T
Q  211 ctattaacttgggtgttgttagtttg 236  Q
     ||||||||||| |||||| ||||||    
T  17693516 ttattaacttggatgttgtgagtttg 17693491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 220
Target Start/End: Complemental strand, 28086923 - 28086706
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||||||||||||||  |||||||| |  ||||||||  |||||| | || |||||| ||  |||| | |||||||||| | |||||| ||||    
T  28086923 agtgctgcgttgtgttgttcgtcatcttgtgcagcatttgatttcgcgtcttgtcgcagtgttcattcaattcttgttgaaagatcgacttcagttaatt 28086824  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtga-cttagaatttaccatattatttgtaggcattttacc 202  Q
    | ||||||||| ||||||||||  ||| ||||||||||| || ||  || ||||| |||||||  ||||| |||| |||||||||||||||||||||  |    
T  28086823 acaaattcaatcaatgatttggaagtcaacgttgcagatccgtaaacattggtatttcagtgattttagattttatcatattatttgtaggcattttgtc 28086724  T
Q  203 gttgtatgctattaactt 220  Q
    ||||||||||||||||||    
T  28086723 gttgtatgctattaactt 28086706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 58 - 243
Target Start/End: Complemental strand, 43834051 - 43833867
Alignment:
Q  58 tgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggta 157  Q
    |||||| |||||||| ||||||||||| ||| || ||||| |||| | ||||||||| |||||||| | |||| |||||||||||   |||| ||| |||    
T  43834051 tgcggtattcgtttggttcctattgaa-gattaacttcagacaatcacaaattcaatcaatgatttagacgtcaacgttgcagatctagaagcatgagta 43833953  T
Q  158 tgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |    |||| ||||  |||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  43833952 ttctggtgatttagtttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcag 43833867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 63 - 243
Target Start/End: Original strand, 14585715 - 14585895
Alignment:
Q  63 tgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtca 162  Q
    |||||||||| ||| |||||||| ||||  ||||| |||| | ||||||||| | |||||||| |||| ||||||||||| | |||| ||||||||        
T  14585715 tgttcgtttggttcgtattgaaatatcagcttcagacaatcacaaattcaatcattgatttggacgtcaacgttgcagatccagaagcatgggtatcctg 14585814  T
Q  163 gtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||| ||||| || | |||||||||||||||| |||| ||||||||||||||||||||||||| ||| |||||||| ||||    
T  14585815 gtgatttagatttcatcatattatttgtaggcgttttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcag 14585895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 67 - 243
Target Start/End: Original strand, 42046263 - 42046439
Alignment:
Q  67 cgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtga 166  Q
    |||||| ||| |||||||||||||  ||||| |||| | ||||||||| ||||||||||||||| | ||||||||| | |||| ||||||||    ||||    
T  42046263 cgtttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgatttgggcgtcaatgttgcagatccagaagcatgggtattctggtga 42046362  T
Q  167 cttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
     ||||| || | |||||||||||||||||||||  | | |||||||||||||||||||||||| |||||||| ||||    
T  42046363 tttagatttcatcatattatttgtaggcattttgacatcgtatgctattaacttgggtgttgtgagtttgttcgcag 42046439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 225
Target Start/End: Complemental strand, 1239500 - 1239286
Alignment:
Q  13 ttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    ||||||||||| | |||||||||||   ||||||||||  | |||| |||||||||||||| | ||| |||||||||||||| |||||||||| | | ||    
T  1239500 ttgtgttgttcatcgtcttgtgcggcgttgtttgatttggcatcttgttgcggtgttcgttgg-ttcatattgaaagatcaacttcagtcaatcacatat 1239402  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||| |||||| ||| |||| ||||||||||| | |||| | | ||||    |||| ||||| | || |||| ||||||||||||||||  ||||||||    
T  1239401 tcaatcaatgatctggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatactatttgtaggcattttgacgttgtat 1239302  T
Q  210 gctattaacttgggtg 225  Q
    ||||||||||||||||    
T  1239301 gctattaacttgggtg 1239286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 58 - 214
Target Start/End: Original strand, 39657487 - 39657643
Alignment:
Q  58 tgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggta 157  Q
    ||||||||||||||| ||| ||||||||||| |  ||||| |||| ||||||||||| |||||||||| |||| ||||||||||| | |||| |||||||    
T  39657487 tgcggtgttcgtttggttcgtattgaaagattagcttcagacaatcataaattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggta 39657586  T
Q  158 tgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctat 214  Q
    |    |||| ||||| || | ||||||||||||||||||||| ||||||||| ||||    
T  39657587 ttctggtgatttagatttcatcatattatttgtaggcattttgccgttgtattctat 39657643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 39 - 238
Target Start/End: Complemental strand, 33214746 - 33214547
Alignment:
Q  39 gtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgc 138  Q
    |||||||||  |||||| | | ||||||| |||  ||||||||||||||||    ||||||||||| ||||||||  |||||||||||| || |||||||    
T  33214746 gtttgatttcgcgtcttgtcgtggtgttcttttagttcctattgaaagatcggcgtcagtcaattacaaattcaaccaatgatttgggcttcaacgttgc 33214647  T
Q  139 agattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||| |||||| ||| | || ||  |||||||   |||| |||||||||| ||| |||||| ||||| |||||||||||||| |||| ||||||||||||    
T  33214646 agatccggaagcatgtgaatttcgatgacttatgttttatcatattatttttagacattttgccgttttatgctattaactttggtgctgttagtttgtt 33214547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 238
Target Start/End: Complemental strand, 36948541 - 36948314
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    ||||||||||||| || ||| ||||||| |||||||||  |||||| | |||||||| |||| ||||||||||||| ||  |  ||||||||||| ||||    
T  36948541 gcgttgtgttgtttgtcgtcctgtgcggcgtttgatttcgcgtcttgtcgcggtgtttgtttaattcctattgaaaaattgacatcagtcaattacaaat 36948442  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||| |||||||| ||   | | |||||| || |||||| ||| |||| || | | |||||| |||| ||||||||||  || |||||  | ||||||     
T  36948441 tcaatcaatgatttaggatgcaatgttgcaaatccggaagcatgagtatttcggcg-cttagattttatcatattatttccagacatttatctgttgtag 36948343  T
Q  210 gctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||||||||||| ||||||||    
T  36948342 gctattaacttgggtgttgtgagtttgtt 36948314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 221
Target Start/End: Complemental strand, 14916263 - 14916081
Alignment:
Q  38 tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttg 137  Q
    ||||||||||   ||||| |||||||||||||||| ||| |||||||||| ||| |||| ||||| | | ||||||| |||||||||| |||| | ||||    
T  14916263 tgtttgatttcatgtcttgttgcggtgttcgtttggttcatattgaaagaccaacttcaatcaatcagagattcaatcaatgatttggacgtccatgttg 14916164  T
Q  138 cagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttg 221  Q
    ||||| |||||| |||  ||| |   ||| ||||| |||| |||||| |||||||||||||| | |||||||||||||||||||    
T  14916163 cagatccggaagcatgaatat-ttgttgatttagattttatcatattgtttgtaggcattttgcagttgtatgctattaacttg 14916081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 78 - 229
Target Start/End: Original strand, 29939353 - 29939504
Alignment:
Q  78 tattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaattta 177  Q
    |||||||||||| || |||||||||||  |||||||  ||||||||||||||  |||||||| || |  ||| ||| |||| ||||||||||||  ||||    
T  29939353 tattgaaagatcgatctcagtcaattactaattcaaccaatgatttgggcgttaacgttgcatatccataagcatgagtatttcagtgacttaggtttta 29939452  T
Q  178 ccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgt 229  Q
     |||||||||||||| |||||| |||||||||| ||||||||| | ||||||    
T  29939453 tcatattatttgtagtcattttgccgttgtatgatattaacttagatgttgt 29939504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 246
Target Start/End: Original strand, 34609859 - 34610057
Alignment:
Q  51 gtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaat----tataaattcaattaatgatttgggcgtcgacgttgcagattcgg 146  Q
    ||||| |||||||||||||||| |||| ||||||||||||| ||||||||||    || |||| |||| ||||||||||||||  ||||||||||||||     
T  34609859 gtcttgttgcggtgttcgtttgtttcc-attgaaagatcaacttcagtcaatcagttacaaatgcaatcaatgatttgggcgtgaacgttgcagattcga 34609957  T
Q  147 aagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcagttt 246  Q
     |  ||| ||||  | |||| ||||  |||| |||||||||  ||||||||||  ||||| |||||||||||||   |||||| |||||||| |||||||    
T  34609958 gaacatgagtattccggtgatttaggttttatcatattattaataggcattttggcgttgaatgctattaacttaaatgttgtaagtttgttcgcagttt 34610057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 8826185 - 8826407
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcggtgtt---tgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcag 97  Q
    |||||||||||||| |||||||||| |||||||| || |||   ||| ||   ||||| ||||||||||| |||||||| |||||||| ||||| ||||     
T  8826185 ctgagtgcagcgttatgttgttcgtcgtcttgtgtggcgttgtgtgaattcgtgtcttgttgcggtgttc-tttgattcatattgaaatatcaacttcaa 8826283  T
Q  98 tcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatt 197  Q
    | ||| ||  ||||||| |||||||||||| || |||||||| ||| ||||| ||| || |    |||| || |  |||| ||||||| |||||||||||    
T  8826284 tgaatcatcgattcaatcaatgatttgggcatcaacgttgcatatttggaagcatgtgtgttctggtgattttgtttttatcatattacttgtaggcatt 8826383  T
Q  198 ttaccgttgtatgctattaacttg 221  Q
    ||| ||||| ||||||||||||||    
T  8826384 ttatcgttgcatgctattaacttg 8826407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 104 - 235
Target Start/End: Complemental strand, 7198205 - 7198074
Alignment:
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    ||||||||||| ||||||||||  ||| ||||||||||| |||||| |||  ||| |  |||| ||||| |||| ||||||||||| ||| |||||  ||    
T  7198205 ataaattcaatcaatgatttggatgtcaacgttgcagatccggaagcatgaatattttggtgatttagattttatcatattatttgcaggaattttgtcg 7198106  T
Q  204 ttgtatgctattaacttgggtgttgttagttt 235  Q
    |||||||||||||| ||||||||||| |||||    
T  7198105 ttgtatgctattaatttgggtgttgtgagttt 7198074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 12 - 198
Target Start/End: Complemental strand, 8443616 - 8443427
Alignment:
Q  12 gttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaa 108  Q
    |||||||||||||| |||||||||||   |||||||||   |||||| |||| ||||||||||| |||   |||||||||||| |||||||||| | | |    
T  8443616 gttgtgttgttcgtcgtcttgtgcggcgttgtttgattccgcgtcttgttgcagtgttcgtttggttcaatttgaaagatcaacttcagtcaatcacata 8443517  T
Q  109 ttcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattt 198  Q
    |||||| |||||||||| | || ||||||||||| |||||| |  |||||    |||| ||||| || | |||||||||||||| |||||    
T  8443516 ttcaatcaatgatttggacatcaacgttgcagatccggaagcactggtattatggtgatttagatttgatcatattatttgtagacattt 8443427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 100 - 243
Target Start/End: Complemental strand, 30568335 - 30568192
Alignment:
Q  100 aattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatttt 199  Q
    ||||| ||||||||  ||||||||| ||||| |||||| ||||   |||| ||| | || ||  ||||||||  |||| ||| |||||||||||||||||    
T  30568335 aattacaaattcaaccaatgatttgagcgtcaacgttgaagatcttgaagcatgtgaatttcgatgacttaggttttatcatgttatttgtaggcatttt 30568236  T
Q  200 accgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
     ||||| ||||||||||||||||||||||| |||||||| ||||    
T  30568235 gccgttttatgctattaacttgggtgttgtgagtttgttcgcag 30568192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 154
Target Start/End: Original strand, 8981178 - 8981292
Alignment:
Q  40 tttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgca 139  Q
    ||||||||  |||||| |||||||||||||||| ||  |||||||||||||   ||||||||| | | |||||||| ||||||||| |||| ||||| ||    
T  8981178 tttgatttcgcgtcttgttgcggtgttcgtttgtttgatattgaaagatcagcgtcagtcaatcacagattcaattgatgatttggacgtcaacgttaca 8981277  T
Q  140 gattcggaagtatgg 154  Q
    ||| |||||| ||||    
T  8981278 gatccggaagcatgg 8981292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 44100005 - 44099925
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatt 93  Q
    |||||||||| |||||||||||   ||||||||||  |||||| ||||||||||| |||||||| ||||||||||||||||    
T  44100005 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttttgcggtgttcatttgattcatattgaaagatcaatt 44099925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 24099371 - 24099127
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgt---gcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcag 97  Q
    ||||||||  ||||||||||||||| ||| |||   ||| ||||||||||  | |||| ||||||||||| |||| ||| |||||||| ||||  |||||    
T  24099371 ctgagtgcgacgttgtgttgttcgtcgtcctgtaccgcgttgtttgatttcgcatcttgttgcggtgttcatttggttcatattgaaaaatcagcttcag 24099272  T
Q  98 tca-----attataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtag 192  Q
    |||     || | ||||||| | |||||||||  |||| ||||||||||| |||||| | |  ||| |  |||| ||||| |||| ||||||||||||||    
T  24099271 tcaatcgcatcacaaattcattcaatgatttgtacgtcaacgttgcagatccggaagaaagaatattttggtgatttagattttatcatattatttgtag 24099172  T
Q  193 gcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||  |||      |||||||||||||||| |||||| |||||||| ||||    
T  24099171 gcaaatta------tatgctattaacttggatgttgtgagtttgttcgcag 24099127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 128
Target Start/End: Complemental strand, 19444126 - 19444050
Alignment:
Q  52 tcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcg 128  Q
    |||| |||||||||||||||||||| |||| ||||| | | |||||||||| ||| |||| ||||||||||||||||    
T  19444126 tcttgttgcggtgttcgtttgattcttattaaaagaccgacttcagtcaatcatagattctattaatgatttgggcg 19444050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 235
Target Start/End: Original strand, 3240365 - 3240590
Alignment:
Q  13 ttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    ||||||||||||| ||||||| ||    ||||||||||  ||| || ||| |||||| ||||| ||  ||||||||||||   |||||||||| | | ||    
T  3240365 ttgtgttgttcgtcgtcttgtacgacgttgtttgatttcgcgtgttgttgtggtgtttgtttggttaatattgaaagatcggcttcagtcaatcacatat 3240464  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttacca--tattatttgtaggcattttaccgttgt 207  Q
    |||||  ||||||||| || | | ||||||||| | |||||||||||||    |||| |||||| ||| ||  | || |||||| ||||||| ||||| |    
T  3240465 tcaatcgatgatttggacgccaatgttgcagatccagaagtatgggtattctggtgatttagaa-ttatcattttttttttgta-gcattttgccgttat 3240562  T
Q  208 atgctattaacttgggtgttgttagttt 235  Q
    ||||||||||||||| |||||| |||||    
T  3240563 atgctattaacttggatgttgtgagttt 3240590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 4808977 - 4809053
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||   ||||||||||  ||||||  |||||||||| |||||||| ||||||||||||    
T  4808977 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 4809053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 9498670 - 9498594
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    ||||||||||||||||||||||   ||||||||||  ||||||  |||||||||| |||||||| |||| |||||||    
T  9498670 tgttgttcgttgtcttgtgcggctttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattaaaagatc 9498594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 9619428 - 9619352
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||   ||||||||||  ||||||  |||||||||| |||||||| ||||||||||||    
T  9619428 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 9619352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 11464184 - 11464260
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||   |||||||||| | |||||  |||||||||| |||||||| ||||||||||||    
T  11464184 tgttgttcgtcgtcttgtgcggcgttgtttgatttctagtctttgtgcggtgttcatttgattcatattgaaagatc 11464260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 238
Target Start/End: Original strand, 21237815 - 21238001
Alignment:
Q  50 cgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaag 149  Q
    |||||| |||| ||||||||||| ||| |||||||||| || ||||| |||||   | ||||||| |||||||||| |||| | ||||||||| | ||||    
T  21237815 cgtcttgttgcagtgttcgtttggttcatattgaaagaccagtttcaatcaatcccatattcaatcaatgatttggacgtcaatgttgcagatccagaag 21237914  T
Q  150 tatgggtatgtcag-tgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
     ||| |||  || | ||| ||||| |||| |  ||| ||||||||  ||||  |||||||| |||||||| |||||||||| ||||||||    
T  21237915 catgtgta-ctctgttgatttagattttatc--attgtttgtaggatttttgtcgttgtatcctattaacatgggtgttgtgagtttgtt 21238001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 28239846 - 28239926
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatt 93  Q
    |||||||||| |||||||||||   |||||||||  |||| || ||||||||||| |||||||  ||||||||||||||||    
T  28239846 tgttgttcgtcgtcttgtgcggcgttgtttgattcctcgtattgttgcggtgttcatttgattaatattgaaagatcaatt 28239926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 35580470 - 35580546
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| ||||||||||    ||||||||||  |||||| |||||||||||||||||||| ||||||| ||||    
T  35580470 tgttgttcgtcgtcttgtgcgacgttgtttgattttccgtcttcttgcggtgttcgtttgattcatattgaatgatc 35580546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 243
Target Start/End: Complemental strand, 41060212 - 41060134
Alignment:
Q  165 gacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||| |||| |||||||||||||| ||||||   |||||||||||| || ||||||| ||| |||||||| ||||    
T  41060212 gacttagattttatcatattatttgtagccattttgttgttgtatgctatcaatttgggtgatgtgagtttgttcgcag 41060134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 42448098 - 42448026
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaa 85  Q
    |||||||||| |||||||||||   |||||||||| |||||||  |||||||||| |||||||| ||||||||    
T  42448098 tgttgttcgtcgtcttgtgcggcattgtttgatttttcgtcttcgtgcggtgttcatttgattcatattgaaa 42448026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 8412434 - 8412393
Alignment:
Q  202 cgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||| ||||||||||||||||||||||| |||||||||||||    
T  8412434 cgttttatgctattaacttgggtgttgtgagtttgtttgcag 8412393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 238
Target Start/End: Original strand, 8867886 - 8868021
Alignment:
Q  106 aaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgtt 205  Q
    ||||||||| |||||||||||| || | |||| ||||  |||||  ||| |||    |||| ||||| |||| |||||||||||||||||||||  ||||    
T  8867886 aaattcaatcaatgatttgggcatcaaagttgaagatctggaagcttggatattctggtgatttagattttatcatattatttgtaggcattttgtcgtt 8867985  T
Q  206 gtatgctat---taacttgggtgttgttagtttgtt 238  Q
    ||||| |||   ||||||||||| ||| ||||||||    
T  8867986 gtatgttatttataacttgggtggtgtgagtttgtt 8868021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 11196902 - 11196973
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaa 84  Q
    |||||||||| |||||||||||   ||||||||||  |||||| ||||||||||| |||||||| |||||||    
T  11196902 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattgaa 11196973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 247
Target Start/End: Original strand, 11267182 - 11267243
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcagtttc 247  Q
    |||||||||||| | ||||| |||||||||||||||| || ||| |||||||| ||||||||    
T  11267182 tttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagtttc 11267243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 15047066 - 15047123
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| ||||||| |||||||||||||||  |||||| |||||||| ||||    
T  15047066 tttgtaggcattataccgttatatgctattaacttgaatgttgtaagtttgttcgcag 15047123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 27747186 - 27747104
Alignment:
Q  14 tgtgttgttcgttgtcttgtgcg---gtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatt 93  Q
    ||||||||||||  |||||||||   |||||||||||   || || ||||||||||| |||||||| ||||||||||||||||    
T  27747186 tgtgttgttcgtcatcttgtgcgacagtgtttgatttcctgttttgttgcggtgttcatttgattcatattgaaagatcaatt 27747104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 42447937 - 42447885
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||| | ||||| |||||||||||||||| |||||| ||||||||    
T  42447937 tttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgtt 42447885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 137
Target Start/End: Complemental strand, 26469198 - 26469123
Alignment:
Q  62 gtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttg 137  Q
    ||||||||||  |||||||||||||||||| || ||| |||   | ||||||| ||||||||||||||| ||||||    
T  26469198 gtgttcgttttgttcctattgaaagatcaagtttagttaatcgcatattcaatcaatgatttgggcgtcaacgttg 26469123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 35283311 - 35283256
Alignment:
Q  166 acttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttg 221  Q
    ||||||| |||| |||||||||||||   |||||| ||||||||||||||||||||    
T  35283311 acttagattttatcatattatttgtatatattttatcgttgtatgctattaacttg 35283256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 2655883 - 2655959
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| ||||||||| |   ||||||||||  ||||||  |||||||||| |||||||| ||||||||||||    
T  2655883 tgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 2655959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 14913237 - 14913279
Alignment:
Q  174 tttaccatattatttgtaggcattttaccgttgtatgctatta 216  Q
    |||| ||||||||||||||| ||||| ||||||||||||||||    
T  14913237 tttatcatattatttgtaggtattttgccgttgtatgctatta 14913279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 29777232 - 29777308
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| ||||||||||    |||||| |||  |||||| ||||||||||| ||| |||||||||||||||||    
T  29777232 tgttgttcgtcgtcttgtgcgacattgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatc 29777308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 123
Target Start/End: Complemental strand, 31634386 - 31634273
Alignment:
Q  12 gttgtgttgttcgttgtcttgtg--cggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    |||||| ||||||||||||||||  || ||||||||||   ||| | || || |||||||||||||| |||| ||||||  | |||||||||||| | ||    
T  31634386 gttgtggtgttcgttgtcttgtgtgcgttgtttgattttctgtcatgttacgatgttcgtttgattcttatttaaagattgaattcagtcaattacatat 31634287  T
Q  110 tcaattaatgattt 123  Q
    | ||| ||||||||    
T  31634286 ttaatcaatgattt 31634273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 34611897 - 34612035
Alignment:
Q  107 aattcaattaatgatttgggcgtcgacgttgcagattcggaag-tatgggtatgtcagtgacttagaatttaccatat-tatttgtaggcattttaccgt 204  Q
    |||||||| || |||||||||||| |||||||||||||||| |  |||| |||  | || ||||  | |||| ||||| | |||||||||||| |   ||    
T  34611897 aattcaatcaaagatttgggcgtcaacgttgcagattcggaggcgatggatattccggtcactttaattttatcatatatttttgtaggcattatcttgt 34611996  T
Q  205 tgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    | |||||||||||||||| |||||| |||||||| ||||    
T  34611997 tatatgctattaacttggatgttgtgagtttgttcgcag 34612035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 39450554 - 39450640
Alignment:
Q  38 tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttg 124  Q
    ||||||||||  ||| |||||| |||||||||||| ||  | |||||||||||| || ||||||||| | ||||||| || ||||||    
T  39450554 tgtttgattttccgttttattgtggtgttcgtttggttatttttgaaagatcaacttaagtcaattacatattcaatcaacgatttg 39450640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 41684508 - 41684558
Alignment:
Q  151 atgggtatgtcagtgacttagaatttaccatattatttgtaggcattttac 201  Q
    |||||||| ||  ||||||||| |||| |||||||||||||||||||||||    
T  41684508 atgggtatttcgatgacttagattttatcatattatttgtaggcattttac 41684558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 43192417 - 43192341
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||   ||||||||||  |||||| ||| ||||||| |||||||| | ||||||||||    
T  43192417 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgtggtgttcatttgattcattttgaaagatc 43192341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 4809138 - 4809195
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| | ||||| |||||||||||||| | |||||| |||||||| ||||    
T  4809138 tttgtaggcattatgccgttatatgctattaacttagatgttgtgagtttgttcgcag 4809195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 12184438 - 12184499
Alignment:
Q  174 tttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagttt 235  Q
    |||| ||||||||||||||| ||||| | ||||||||||||| |||||| || ||| |||||    
T  12184438 tttatcatattatttgtaggtattttgctgttgtatgctattgacttggatgatgtgagttt 12184499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 12428866 - 12428927
Alignment:
Q  174 tttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagttt 235  Q
    |||| ||||||||||||||| ||||| | ||||||||||||| |||||| || ||| |||||    
T  12428866 tttatcatattatttgtaggtattttgctgttgtatgctattgacttggatgatgtgagttt 12428927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 34611817 - 34611892
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagat 88  Q
    |||||||||| |||||||||||   ||||||||||  |||| |  |||||||||| |||||||| |||||||||||    
T  34611817 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcgtcgtgcggtgttcatttgattcatattgaaagat 34611892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 43431913 - 43431970
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||| ||||||||||||  |||||||||||||||| |||||| | |||||| ||||    
T  43431913 tttgtaagcattttaccgtcatatgctattaacttggatgttgtgaatttgttagcag 43431970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 43890034 - 43889977
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| | ||||| |||||||||||||||| || ||| | |||||||||||    
T  43890034 tttgtaggcattatgccgttatatgctattaacttggatgctgtgattttgtttgcag 43889977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 11464345 - 11464397
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||| | ||||| |||||||||||||||| || ||| ||||||||    
T  11464345 tttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgtt 11464397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 11725854 - 11725906
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||| | ||||| |||||||||||||||| || ||| ||||||||    
T  11725854 tttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgtt 11725906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 26469271 - 26469231
Alignment:
Q  51 gtcttattgcggtgttcgtttgattcctattgaaagatcaa 91  Q
    ||||| |||| ||||||||||| ||||||||||||||||||    
T  26469271 gtcttgttgcagtgttcgtttggttcctattgaaagatcaa 26469231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 7e-55; HSPs: 97)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 10 - 238
Target Start/End: Complemental strand, 4904252 - 4904024
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    |||||||||||||||| ||||||||||  |||||||||   ||||| |||||||||||||||| ||| |||||||||||| |  ||||||||||| ||||    
T  4904252 gcgttgtgttgttcgtcgtcttgtgcgacgtttgattttgtgtcttgttgcggtgttcgtttggttcatattgaaagatcgacatcagtcaattacaaat 4904153  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    |||| | |||||||||| ||| ||||||||||| | |||| |||| ||| || |||||||||| |||| |||||||||||||| ||||||  ||||||||    
T  4904152 tcaactgatgatttgggtgtcaacgttgcagatccagaagcatggatatttcggtgacttagattttatcatattatttgtagacattttgtcgttgtat 4904053  T
Q  210 gctattaacttgggtgttgttagtttgtt 238  Q
    ||||||||||||| |||||| ||||||||    
T  4904052 gctattaacttggatgttgtgagtttgtt 4904024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 27 - 237
Target Start/End: Original strand, 17151433 - 17151644
Alignment:
Q  27 gtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttggg 126  Q
    ||||||||| | |||||||||  | |||| || ||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||    
T  17151433 gtcttgtgcagcgtttgatttcgcatcttgttacggtgttcgtttgattcctattgaaagatcaatttcagtcaattacagattcaatcaatgatttggg 17151532  T
Q  127 cgtcgacgttgcagattcggaagta-tgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtg 225  Q
    ||||||||||| |||| |||||| | ||||||| || ||||||| ||||||| ||||||||| ||||| |||||   |||||||||||||||||||  ||    
T  17151533 cgtcgacgttgtagatccggaagcattgggtatttcggtgacttggaatttatcatattattagtaggtattttgttgttgtatgctattaacttgaatg 17151632  T
Q  226 ttgttagtttgt 237  Q
    |||| |||||||    
T  17151633 ttgtgagtttgt 17151644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 12 - 243
Target Start/End: Original strand, 18763463 - 18763694
Alignment:
Q  12 gttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattc 111  Q
    |||||||||||||| ||||||||||| |||||||||  ||||||||  ||||||||||||  ||||||||||||||||    ||| ||||||| ||||||    
T  18763463 gttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttatcacggtgttcgtttagttcctattgaaagatcggcatcaatcaattacaaattc 18763562  T
Q  112 aattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgc 211  Q
    ||  ||| ||||||||||| ||||| ||||| |||||| ||| | || || |||||||||  |||| ||||||||||||||||||||| ||||| |||||    
T  18763563 aaccaatcatttgggcgtcaacgttacagatccggaagcatgtgaatttcggtgacttaggttttatcatattatttgtaggcattttgccgttttatgc 18763662  T
Q  212 tattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||||| |||||||| ||||    
T  18763663 tattaacttgggtgttgtgagtttgttcgcag 18763694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 7677986 - 7677748
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||  ||||||||  ||||||| |||   |||||||||||||||| |  ||| ||||||    
T  7677986 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttatctcggtgtttgttcagttcctattgaaagatctacatcaatcaatt 7677887  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| | || ||||||||||| || ||| |||||||| || |||| ||||  |||| |||||||||| |||||||||| |||    
T  7677886 acaaattcaagcaatgatttggacatcaacgttgcagatccgaaagcatgggtatttccgtgaattaggttttatcatattatttttaggcattttgccg 7677787  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgca 242  Q
    |||||||||||||||||||||| ||| ||||||||||||    
T  7677786 ttgtatgctattaacttgggtgctgtgagtttgtttgca 7677748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 6 - 243
Target Start/End: Complemental strand, 25509179 - 25508942
Alignment:
Q  6 tgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattat 105  Q
    |||||||||||||||||  | ||||||||||  |||||||||   ||||| | |||||||||||||  |||| |||||||||||||  |||||||||||     
T  25509179 tgcagcgttgtgttgttattcgtcttgtgcgacgtttgattttgtgtcttgtcgcggtgttcgtttagttcccattgaaagatcaacatcagtcaattac 25509080  T
Q  106 aaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgtt 205  Q
    ||||||||| |||||| |||||||| |||||||| || |||||  |||||||| ||  ||||||||| |||| | ||||||||||||||||||| |||||    
T  25509079 aaattcaatcaatgatctgggcgtcaacgttgcaaatccggaaacatgggtatttcgatgacttagattttatcgtattatttgtaggcattttgccgtt 25508980  T
Q  206 gtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||| |||||||||||||| ||| |||||||| ||||    
T  25508979 gtatgttattaacttgggtgatgtgagtttgttcgcag 25508942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 31788451 - 31788682
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaatt 110  Q
    |||| |||||||||||||||||||||| |||||||||  | |||| | |||||||| |||   |||||||||||||||| || ||| ||||||| |||||    
T  31788451 cgttttgttgttcgttgtcttgtgcggcgtttgatttg-catcttgtcgcggtgtttgttcagttcctattgaaagatctatatcaatcaattacaaatt 31788549  T
Q  111 caattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatg 210  Q
    |||  |||||||||| |||| ||||||||||| || ||| ||| |||| ||||||||||||  |||| ||||||||||||||||||||| ||||||||||    
T  31788550 caagcaatgatttggacgtcaacgttgcagatccgaaagcatgagtatttcagtgacttaggttttaacatattatttgtaggcattttgccgttgtatg 31788649  T
Q  211 ctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| || ||| |||||||| ||||    
T  31788650 ctattaacttggatgctgtgagtttgttcgcag 31788682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 38445153 - 38445392
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    |||||||||||||||||||||| ||||||||||| |||||||||  ||| |||| |||||||| |||   |||||||||||||||| |  ||||| ||||    
T  38445153 agtgcagcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttatcgcggtgtttgttcagttcctattgaaagatctacatcagtaaatt 38445252  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| ||||||||||| ||||||  ||||||| || ||||||||   |||| ||||||||||||||||||||| ||     
T  38445253 acaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcgtgggtatttcggtgacttaagttttatcatattatttgtaggcattttgcca 38445352  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||| ||||||||| |||| ||| |||||||| ||||    
T  38445353 ttgtatgttattaactttggtgctgtgagtttgttcgcag 38445392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 49 - 239
Target Start/End: Complemental strand, 33760261 - 33760071
Alignment:
Q  49 tcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaa 148  Q
    ||||||| |||| ||||||||||||||| |||||||||||||| |||||||||||||| | ||||| ||||||||| ||||||| ||||||||| |  ||    
T  33760261 tcgtcttgttgcagtgttcgtttgattcatattgaaagatcaacttcagtcaattatagactcaatcaatgatttgagcgtcgatgttgcagatccataa 33760162  T
Q  149 gtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgttt 239  Q
      ||| |||| |||||||||||||| ||| ||||||||||||||||||||| | |||||| |||||||||||| ||| |||||||||||||    
T  33760161 acatgtgtatttcagtgacttagaacttatcatattatttgtaggcattttgctgttgtaagctattaacttgtgtgctgttagtttgttt 33760071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 1415551 - 1415783
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaatt 110  Q
    ||||||||||||| | ||||||||||| |||||||||  ||| || | |||||||| ||||  ||||||||||||||||    ||||||||||| |||||    
T  1415551 cgttgtgttgttcttcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgtttatttcctattgaaagatcggcatcagtcaattacaaatt 1415650  T
Q  111 caattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatg 210  Q
    |||  ||||||||||||||| |||||| |||| |||||| ||| | || || |||||||||  |||| || ||||||||||||||||||||||||  |||    
T  1415651 caaccaatgatttgggcgtcaacgttgaagatccggaagcatgtgaatttcggtgacttaggttttatcagattatttgtaggcattttaccgtttaatg 1415750  T
Q  211 ctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||||||||||||||| |||||||| ||||    
T  1415751 ctattaacttgggtgttgtgagtttgttcgcag 1415783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 16 - 243
Target Start/End: Original strand, 1421675 - 1421902
Alignment:
Q  16 tgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaatt 115  Q
    |||||||||| ||||||||| | |||||||||  |||||| | |||||||| ||    || ||||||||||||| |  ||| ||||||| ||||||||      
T  1421675 tgttgttcgtcgtcttgtgcagcgtttgatttcgcgtcttgtcgcggtgtttgtccagtttctattgaaagatctacatcaatcaattacaaattcaagc 1421774  T
Q  116 aatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctatt 215  Q
    |||||||||| |||| ||||||||||| |||||| |||||||| || |||| ||||  |||| |||||||||||||||||||||  ||||||||||||||    
T  1421775 aatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgatttaggttttatcatattatttgtaggcattttgtcgttgtatgctatt 1421874  T
Q  216 aacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||| |||||||||||||    
T  1421875 aacttgggtgttgtgagtttgtttgcag 1421902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 37876719 - 37876480
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||| |||||||||| |||||||||||  ||||||||  |||||| | |||||||| ||||  ||||||||| |||||| |  ||||||||||    
T  37876719 agtgcggcgttttgttgttcgtcgtcttgtgcggcatttgatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaatt 37876620  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  ||||| |||||| || ||||||||||| || ||| |||||||| || |||||||| | |||| ||||||||||||||||||||| |||    
T  37876619 acaaattcaaccaatgacttgggcatcaacgttgcagatccgaaagcatgggtatttcggtgacttaaattttatcatattatttgtaggcattttgccg 37876520  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    | |||||||||||||||||||| ||  |||||||| ||||    
T  37876519 tcgtatgctattaacttgggtgatgcgagtttgttcgcag 37876480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 57 - 243
Target Start/End: Complemental strand, 12554241 - 12554055
Alignment:
Q  57 ttgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggt 156  Q
    |||||||||||||||||||| |||||||| ||||| |||||||||||| | ||||||| ||||||||||| || ||| ||||| ||| ||||| ||| ||    
T  12554241 ttgcggtgttcgtttgattcatattgaaatatcaacttcagtcaattacagattcaatcaatgatttgggtgtggacattgcatatttggaagcatgagt 12554142  T
Q  157 atgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    || ||||| ||||||  |||| |||||||||||||||||||||  ||||||||| |||||||||||||||||| |||||||| ||||    
T  12554141 atttcagtaacttaggttttatcatattatttgtaggcattttgtcgttgtatgatattaacttgggtgttgtgagtttgttcgcag 12554055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 4778740 - 4778979
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||| ||||| ||||||||| | |||||||||  ||| || | ||||||||  ||  |||||| |||||||||| |  ||||||||||    
T  4778740 agtgcggcgttgtgttattcgtcgtcttgtgcagcgtttgatttcgcgttttctcgcggtgtttattcaattcctcttgaaagatctacatcagtcaatt 4778839  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| ||||||||||| |||||| |||||||| || ||||||||   |||| ||||||||||||||||||||| |||    
T  4778840 acaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgccg 4778939  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||| |||||| ||||||| ||| |||||||| ||||    
T  4778940 ttgtatgttattaatttgggtgctgtgagtttgttcgcag 4778979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 5427981 - 5427743
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||| |||||||||| |||||||| || |||||||||  |||||| | |||||||| ||||  ||| ||||| |||||| |  |||||||||     
T  5427981 agtgcggcgttttgttgttcgtcgtcttgtgtggcgtttgatttcgcgtcttgtcgcggtgtttgtttagttcatattggaagatctacatcagtcaat- 5427883  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  ||||| ||| ||||| ||||||||||| |||||||||| |||| ||||||||||||  |||| ||||||||||| | |||||||| ||    
T  5427882 acaaattcaaccaatgacttgtgcgtcaacgttgcagatccggaagtatgtgtatttcagtgacttaggttttatcatattatttgcaagcattttatcg 5427783  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||||||||| ||| |||||||| ||||    
T  5427782 ttgtatgctattaacttgggtgctgtgagtttgttcgcag 5427743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 4 - 238
Target Start/End: Complemental strand, 9169371 - 9169137
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||||||||||||||  |||||||||  ||| ||   ||| |||| ||| | ||||| |||||||||| |  ||||| ||||    
T  9169371 agtgcggcgttgtgttgttcgttgtcttgtgcgtcgtttgatttcacgttttgccgcgatgtttgttcggttcctcttgaaagatctacatcagtgaatt 9169272  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| ||||||||||| |||||| |||||||| || ||||||||    ||| ||||||||||||||||||||| |||    
T  9169271 acaaattcaacgaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagtcttatcatattatttgtaggcattttgccg 9169172  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    ||||||||||||||||||| || ||| ||||||||    
T  9169171 ttgtatgctattaacttggatgctgtgagtttgtt 9169137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 243
Target Start/End: Complemental strand, 30400139 - 30399903
Alignment:
Q  13 ttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattca 112  Q
    ||||||||||| | |||||||||||  ||||||||  | || | | |||||||||||||  |||||||||||||||||| |||||||||||| |||||||    
T  30400139 ttgtgttgttcttcgtcttgtgcggcatttgattttgcatcgtgtcgcggtgttcgtttagttcctattgaaagatcaacttcagtcaattacaaattca 30400040  T
Q  113 attaatgatttgggcgtcgacgttgcagattcggaagtatgggta------tgtcagtgacttagaatttaccatattatttgtaggcattttaccgttg 206  Q
    || ||||||||||||||| ||||||||||| || ||| ||| |||      | | ||||||||||| |||| ||||||||||||||||||||| |||| |    
T  30400039 atcaatgatttgggcgtcaacgttgcagatccgaaagcatgagtatttgatttttagtgacttagattttatcatattatttgtaggcattttgccgtcg 30399940  T
Q  207 tatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||  |||||||| |||||||| |||||||| ||||    
T  30399939 tatgtcattaacttaggtgttgtaagtttgttcgcag 30399903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 243
Target Start/End: Complemental strand, 31128887 - 31128659
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    ||||||||||||| || |||||||| || ||||||||   | |||| | |||||||||||||  |||||||||||| ||| || ||||||||||| ||||    
T  31128887 gcgttgtgttgttagtcgtcttgtgtggcgtttgattccgcttcttgtcgcggtgttcgtttagttcctattgaaaaatcgatatcagtcaattacaaat 31128788  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||| |||||||| |||||| ||||||||||| |||||| ||| |||| ||||||||||| | |||| ||||||||||||||||||||| |||||        
T  31128787 tcaatcaatgatttaggcgtcaacgttgcagatccggaagcatgagtatttcagtgacttatattttatcatattatttgtaggcattttgccgtt---- 31128692  T
Q  210 gctattaacttgggtgttgttagtttgtttgcag 243  Q
      ||||||||||| |||||| |||||||| ||||    
T  31128691 -atattaacttggatgttgtgagtttgttcgcag 31128659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 7646460 - 7646704
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||| |||||||||| ||||||||||| |||||||||  ||| || | | |||||| |||  |||| | |||||||||| |  ||||||||||    
T  7646460 agtgcggcgttatgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgtggtgtttgttcaattctttttgaaagatctacatcagtcaatt 7646559  T
Q  104 ataaattcaattaatgattt-----gggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattt 198  Q
    | ||||||||| ||||||||     || |||| ||||||||||| |||||| ||| |||| || ||||||||   |||| ||||||||||||||||||||    
T  7646560 acaaattcaatcaatgatttaatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttgtaggcattt 7646659  T
Q  199 taccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    | ||||||||||||||||||||||||||||| |||||||| ||||    
T  7646660 tgccgttgtatgctattaacttgggtgttgtgagtttgttcgcag 7646704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 27097519 - 27097281
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| |||||||||||  ||||||||  | | || | |||||||| |||   ||||| |||||||||| |  ||||||||||    
T  27097519 agtgcggcgttgtgttgttcgtcgtcttgtgcggcatttgatttcaccttttgtcgcggtgtttgttcagttcctcttgaaagatctacatcagtcaatt 27097420  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| |||||||||||  ||||| |||| ||| || ||||||||   |||| ||||||||||||||| ||||| |||    
T  27097419 acaaattcaaccaatgatttggacgtcaacgttgcagatctggaagcatgg-tatttcggtgacttaagttttatcatattatttgtaggaattttgccg 27097321  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||| ||||||||||||||||||| |||||||||||||    
T  27097320 ttgtatactattaacttgggtgttgtgagtttgtttgcag 27097281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 16 - 238
Target Start/End: Original strand, 33923704 - 33923926
Alignment:
Q  16 tgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaatt 115  Q
    |||||||||| ||||||||||| |||||||||  ||| |||| | |||||| ||||  |||||||||||||||| |  ||||||||||| ||||||||      
T  33923704 tgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttatcgtggtgtttgtttatttcctattgaaagatcgacatcagtcaattacaaattcaacc 33923803  T
Q  116 aatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctatt 215  Q
    ||||||||||||||| |||||| |||| |||||| ||| | || || |||||||||  |||| ||||||||||| |||| ||||  |||| |||||||||    
T  33923804 aatgatttgggcgtcaacgttgaagatccggaagcatgtgaatttcggtgacttaggttttatcatattatttgcaggcgttttgtcgttttatgctatt 33923903  T
Q  216 aacttgggtgttgttagtttgtt 238  Q
    |||||||||| ||| ||||||||    
T  33923904 aacttgggtgctgtgagtttgtt 33923926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 4 - 236
Target Start/End: Complemental strand, 19062465 - 19062228
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    |||||||||||||||||||||| |||||||||||  ||||||||  |||||| |  | ||||| |||  |||||| |||||||||| |  ||||||||||    
T  19062465 agtgcagcgttgtgttgttcgtcgtcttgtgcggcatttgatttcacgtcttgtcacagtgtttgttcaattcctgttgaaagatctacatcagtcaatt 19062366  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatatt-----atttgtaggcattt 198  Q
    | ||||||||| |||||||||| |||| ||||| ||||| || ||| |||||||| || ||||||||   |||| ||||||     ||||||||||||||    
T  19062365 acaaattcaatcaatgatttggacgtcaacgtttcagatccgaaagcatgggtatttcggtgacttaagttttatcatattatttaatttgtaggcattt 19062266  T
Q  199 taccgttgtatgctattaacttgggtgttgttagtttg 236  Q
    | ||||||||||||||||||||||||| ||| ||||||    
T  19062265 tgccgttgtatgctattaacttgggtgatgtgagtttg 19062228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 10 - 238
Target Start/End: Complemental strand, 43397226 - 43396997
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    |||||||||||||||| |||||||| || |||||||||  |||||| | |||||||||||||  ||| ||||||||||||    | || ||| ||  |||    
T  43397226 gcgttgtgttgttcgtcgtcttgtgtggcgtttgatttcgcgtcttgtcgcggtgttcgtttatttcatattgaaagatcggcattagccaactacgaat 43397127  T
Q  110 tcaattaatgatttgggcgtcgacgtt-gcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgta 208  Q
    ||||  ||||||||||||||| ||||| | |||| |||||| ||| | || ||||||||||||  |||| ||||||||||||| ||||||| ||||| ||    
T  43397126 tcaaccaatgatttgggcgtcaacgtttgaagatccggaagcatgtgaatttcagtgacttaggttttatcatattatttgtacgcattttgccgtttta 43397027  T
Q  209 tgctattaacttgggtgttgttagtttgtt 238  Q
    ||||||||||||||||||||||||||||||    
T  43397026 tgctattaacttgggtgttgttagtttgtt 43396997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 238
Target Start/End: Complemental strand, 11985343 - 11985112
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| || |||||||||| |||||||||||||| |||||||||  |||||| | ||||||||| |||  |||||||||||||| | |   |||||||||    
T  11985343 agtgcggctttgtgttgtttgttgtcttgtgcggcgtttgattttgcgtcttgtcgcggtgttcatttagttcctattgaaagagcga---cagtcaatt 11985247  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||| ||||  |||||||| || ||| ||||||||||| | |||| ||| |||| ||||||||||||  |||| ||||||||||||||||||||| | |    
T  11985246 acaaactcaaccaatgatttaggtgtcaacgttgcagatccagaagaatgagtatttcagtgacttaggttttatcatattatttgtaggcattttgctg 11985147  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||| |||||||||||| |||||| | ||||||    
T  11985146 ttgtatcctattaacttggatgttgtgaatttgtt 11985112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 238
Target Start/End: Complemental strand, 28871873 - 28871667
Alignment:
Q  32 gtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcg 131  Q
    |||||| |||||||||  |||||| | |||||||||||||| |||||||||||||||||| |||||||||||| | ||||||  |||||||| |||||||    
T  28871873 gtgcggcgtttgatttcgcgtcttgtcgcggtgttcgtttggttcctattgaaagatcaacttcagtcaattacagattcaaccaatgatttaggcgtcg 28871774  T
Q  132 acgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgtta 231  Q
    ||||||||||||| |||  |||  ||| | ||||||| | |||||| |||| || | ||| ||||||| ||||||||| |||||||||||| || ||| |    
T  28871773 acgttgcagattcagaatcatgtatattttagtgactcaaaatttatcatactaatcgtaagcattttgccgttgtatactattaacttggatgctgtga 28871674  T
Q  232 gtttgtt 238  Q
    |||||||    
T  28871673 gtttgtt 28871667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 12 - 209
Target Start/End: Original strand, 4264467 - 4264664
Alignment:
Q  12 gttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattc 111  Q
    |||| ||||||||| |||||||||||||||||||||  |||||||||||||||||| |||| ||| |||||||||||||| |||||||||||| | |||     
T  4264467 gttgcgttgttcgtcgtcttgtgcggtgtttgatttcgcgtcttattgcggtgttcatttggttcttattgaaagatcaacttcagtcaattacagattt 4264566  T
Q  112 aattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||| |||||||| || ||| | ||| || ||  ||||| |||||||| ||  ||||||  |||||| |||||||||||||||||||||  ||||||||    
T  4264567 aatcaatgatttaggagtcaatgttccaaatctggaagcatgggtatttcgatgacttcaaatttatcatattatttgtaggcattttgtcgttgtat 4264664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 10 - 238
Target Start/End: Complemental strand, 19029021 - 19028793
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    |||||||||| ||||| ||| |||||||  ||||||||  |||||| |  |||||||| |||  |||||||||||||||| | ||||||||| || ||||    
T  19029021 gcgttgtgttattcgtcgtcatgtgcggcatttgatttcgcgtcttgtctcggtgttcatttagttcctattgaaagatcgacttcagtcaagtacaaat 19028922  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||| ||||||||| ||||| |||||||| || | |||| |||| ||| || || ||||||| |||| |||| ||||||||||||||||  |||| |||    
T  19028921 tcaatcaatgatttgagcgtcaacgttgcaaatccagaagcatggatatttcggtaacttagattttatcatactatttgtaggcattttttcgttttat 19028822  T
Q  210 gctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||| ||||||| || |||||    
T  19028821 gctattaacttgagtgttgtgagattgtt 19028793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 62 - 243
Target Start/End: Complemental strand, 10237271 - 10237090
Alignment:
Q  62 gtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtc 161  Q
    ||||||||||| ||| |||||||||||||  ||||| |||| | ||||||||| |||||||||| |||| ||||||||||| | |||| |||||||| ||    
T  10237271 gtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtat-tc 10237173  T
Q  162 ag-tgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
     | ||| ||||| || | |||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||| ||||    
T  10237172 tgatgatttagatttcatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcag 10237090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 31210720 - 31210492
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||||||||||| |||||||||||||| |||||||||  |||||||| | |||||| |||   |||||||||||||||| |  ||| ||||||    
T  31210720 agtgcggcgttgtgttgtttgttgtcttgtgcggcgtttgatttcgcgtcttatcgtggtgtttgttcagttcctattgaaagatctacatcaatcaatt 31210621  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| |||||||||||  | ||| |||||||| || |||| ||||  |||| ||||||||||||||||||||| |||    
T  31210620 acaaattcaagcaatgatttggacgtcaacgttgcagatcagaaagcatgggtatttcggtgatttaggttttatcatattatttgtaggcattttgccg 31210521  T
Q  204 ttgtatgctatta---acttgggtgttgt 229  Q
       ||||||||||   |||||||||||||    
T  31210520 gattatgctattaattacttgggtgttgt 31210492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 15 - 243
Target Start/End: Original strand, 8809278 - 8809505
Alignment:
Q  15 gtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaat 114  Q
    |||||||| || |||||||||||   |||||||  |||||| | ||||||||||  |  |||||||||||||||| |  ||||||||||| || ||||||    
T  8809278 gtgttgttagtcgtcttgtgcggcaattgatttcgcgtcttgtcgcggtgttcgcatagttcctattgaaagatcgacatcagtcaattacaagttcaat 8809377  T
Q  115 taatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctat 214  Q
     ||||||||||||| | || |||||||| |||||| ||| | || ||||||||||||| |||| ||||||| | |||| ||||||  |||||||||||||    
T  8809378 caatgatttgggcgccaacattgcagatccggaagcatgagaatttcagtgacttagattttatcatatta-tagtagacattttgtcgttgtatgctat 8809476  T
Q  215 taacttgggtgttgttagtttgtttgcag 243  Q
    |||||||| |||||| |||||||| ||||    
T  8809477 taacttggatgttgtgagtttgttcgcag 8809505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 36943234 - 36942996
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||  ||| || | |||||||| ||||  |||| ||||||||||| |  | |||| |||    
T  36943234 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtattgtcgcggtgtttgtttagttccaattgaaagatctacattagtcgatt 36943135  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | |||||| |  ||||||||||||||| ||||||||||| |||||  |||||||| || |||||||  | |||| ||||||||||||||||||| | |||    
T  36943134 acaaattccaccaatgatttgggcgtcaacgttgcagatccggaaacatgggtatttcggtgacttgaattttatcatattatttgtaggcattatgccg 36943035  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
     |||||||||||||  |||||| ||| ||| |||| ||||    
T  36943034 -tgtatgctattaatctgggtgctgtgagtatgttcgcag 36942996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 27 - 238
Target Start/End: Complemental strand, 33585825 - 33585614
Alignment:
Q  27 gtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttggg 126  Q
    |||||||| || ||||||||   |||||| | |||||||| |||   |||||||||||| ||| |  ||| ||||||| ||||||||  ||||||||||     
T  33585825 gtcttgtgtggcgtttgattacgcgtcttgtcgcggtgtttgttcagttcctattgaaaaatctacctcaatcaattacaaattcaagcaatgatttgga 33585726  T
Q  127 cgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgt 226  Q
    |||| ||||||||||| |||||| ||| |||  || |||| |||   |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  33585725 cgtcaacgttgcagatccggaagcatgagtaattcggtgatttaagttttatcatattatttgtatgcattttgccgttgtatgctattaacttgggtgt 33585626  T
Q  227 tgttagtttgtt 238  Q
    ||| ||||||||    
T  33585625 tgtgagtttgtt 33585614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 238
Target Start/End: Complemental strand, 32448725 - 32448495
Alignment:
Q  13 ttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    ||||||||||||| ||||||||||    ||||||||||  | |||| |||||||||||||| | ||| |||||||||||||  |||||||||| | | ||    
T  32448725 ttgtgttgttcgtcgtcttgtgcgccgttgtttgatttggcatcttgttgcggtgttcgttgg-ttcatattgaaagatcagcttcagtcaatcacagat 32448627  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttaga--att-taccatattatttgtaggcattttaccgttg 206  Q
    ||||| |||||||||| |||| ||||||||||| | |||| | | ||||    |||| |||||  ||| || ||||||||||||||||||||| ||||||    
T  32448626 tcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattattatatcatattatttgtaggcattttgccgttg 32448527  T
Q  207 tatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||||||| |||||| ||||||||    
T  32448526 tatgctattaacttggatgttgtgagtttgtt 32448495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 58 - 235
Target Start/End: Original strand, 3308986 - 3309163
Alignment:
Q  58 tgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggta 157  Q
    ||||||||||||||| ||  |||||||| ||||| ||||| |||| | ||||||||| ||||||||||||||  ||||||||||| | |||| |||||||    
T  3308986 tgcggtgttcgtttggtttgtattgaaatatcaacttcagacaatcacaaattcaatcaatgatttgggcgttaacgttgcagatccagaagcatgggta 3309085  T
Q  158 tgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagttt 235  Q
    |    |||| ||| | || | |||||||||||||| |||||| ||||||||||||||||||||||||| ||| |||||    
T  3309086 ttctggtgatttatatttcatcatattatttgtagtcattttgccgttgtatgctattaacttgggtgctgtgagttt 3309163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 10929645 - 10929890
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcggtgtt----tgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttca 96  Q
    |||||||| | |||||||||||||| ||||||| ||  |||    ||||||| |||||| |||||||||||||||| ||| | |||||| ||||  ||||    
T  10929645 ctgagtgcggtgttgtgttgttcgtcgtcttgtacgacgttgttttgatttagcgtcttgttgcggtgttcgtttggttcatgttgaaaaatcagcttca 10929744  T
Q  97 gtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcat 196  Q
    |||||| | | ||||||| |||||||||| | || ||||||||||| |||||| ||| ||||    |||| ||| | |||| |||||||||| |||||||    
T  10929745 gtcaatcacagattcaatcaatgatttggacatcaacgttgcagatccggaagcatgtgtattctggtgatttaaattttatcatattatttataggcat 10929844  T
Q  197 tttaccgttgtatgctattaacttgggtgttgttagtttgtttgca 242  Q
    |||   |||| ||||||||||||||| || ||| ||||||||||||    
T  10929845 tttgttgttgaatgctattaacttggatgctgtgagtttgtttgca 10929890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 37994260 - 37994510
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcag 97  Q
    |||||||| ||||||||||||||||  || ||| |||   ||||||||||  | |||| |||| |||||| |||||||| |||||||| ||||  |||||    
T  37994260 ctgagtgcggcgttgtgttgttcgtcttcctgtacggcattgtttgattttgcatcttgttgcagtgttcatttgattcatattgaaaaatcagcttcag 37994359  T
Q  98 tcaattata-----aattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtag 192  Q
    ||||| | |     |||||||| |||||||||| ||||  |||||||||| |||||| | |  |||  | |||| ||||| |||| ||||||||||||||    
T  37994360 tcaatcacatcacaaattcaatgaatgatttggacgtcagcgttgcagatccggaagaaagaatattccggtgatttagattttatcatattatttgtag 37994459  T
Q  193 gcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||| | ||| ||||||||||||||||||||||| |||||||| ||||    
T  37994460 gcattttgctgttatatgctattaacttgggtgttgtgagtttgttcgcag 37994510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 243
Target Start/End: Complemental strand, 17249253 - 17249021
Alignment:
Q  13 ttgtgttgttcgttgtcttgtgcggtgt---ttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    ||||||||||||| ||||||||||| ||   || ||||  | |||| |||||||||| ||| | ||| ||||||||||||| ||||||||||| | | ||    
T  17249253 ttgtgttgttcgtcgtcttgtgcggcgtagttttatttggcatcttgttgcggtgtttgttgg-ttcatattgaaagatcagtttcagtcaatcacagat 17249155  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||| |||||||||| |||| ||||||||||| |  ||| | | ||||    |||| ||||| | || |||||||||||||| |||||| |||||||||    
T  17249154 tcaatcaatgatttggacgtcaacgttgcagatccataagcaagagtattctggtgatttagattatatcatattatttgtagacattttgccgttgtat 17249055  T
Q  210 gctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||| ||| |||||||| ||||    
T  17249054 gctattaacttgggtgctgtgagtttgttcgcag 17249021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 243
Target Start/End: Original strand, 24461430 - 24461669
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcgg---tgtttgatttat---cgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||||||||||||||||| ||||||||   |||||||||  |   || ||| |||||||||||||||| ||| |||||||||||||| |||||||||      
T  24461430 gcgttgtgttgttcgttgttttgtgcggcgttgtttgattattttgcgccttgttgcggtgttcgtttggttcatattgaaagatcaacttcagtcaacc 24461529  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | | |||||||  ||||||||| || | ||||||||||| |||||| ||  |||| |  |||| ||||| || | |||||| |||||||| |||||  ||    
T  24461530 acagattcaatcgatgatttggacgccaacgttgcagatccggaagcattagtattttggtgatttagatttcatcatattttttgtaggtattttgtcg 24461629  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    || |||||||||||||| |||||||| |||||||| ||||    
T  24461630 ttatatgctattaactttggtgttgtgagtttgttcgcag 24461669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 14955570 - 14955755
Alignment:
Q  58 tgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggta 157  Q
    ||||||||||||||| ||| |||||||| ||||  |||||  ||| ||||||||||| ||||||||| ||||| ||||||||||| | |||  ||| |||    
T  14955570 tgcggtgttcgtttggttcatattgaaatatcatcttcagataatcataaattcaatcaatgatttgagcgtcaacgttgcagatccagaaacatgtgta 14955669  T
Q  158 tgtcag-tgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    | || | ||| ||||| |||| |||||||||||||| ||||||| | ||||||| ||||||||| |||||||| |||||||| ||||    
T  14955670 t-tctgatgatttagattttatcatattatttgtagacattttatcattgtatgttattaacttaggtgttgtgagtttgttcgcag 14955755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 243
Target Start/End: Complemental strand, 29173786 - 29173591
Alignment:
Q  50 cgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaag 149  Q
    |||||||| || ||||||||||  ||||||||||||| || |  ||| ||||||| ||||||||| ||| ||||||| ||| ||||||||||| || |||    
T  29173786 cgtcttatcgcagtgttcgtttagttcctattgaaagctcgacatca-tcaattacaaattcaatcaattatttgggtgtcaacgttgcagatccgaaag 29173688  T
Q  150 tatgggtatgtcagtgacttagaatttacca---tattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
     |||||||| || |||||||||| |||| ||   ||||||||||| |||||||   |||||||| ||||||||| |||||||| |||||||| ||||    
T  29173687 catgggtatttcggtgacttagattttatcatattattatttgtatgcattttgttgttgtatgttattaactttggtgttgtgagtttgttcgcag 29173591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 80 - 238
Target Start/End: Complemental strand, 29279607 - 29279449
Alignment:
Q  80 ttgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttacc 179  Q
    ||||| ||||||  |||||| |||| ||||||||| ||||||||| ||||| | ||||||||| |||||  ||| || | || |||||||| | |||| |    
T  29279607 ttgaatgatcaacatcagtcgattacaaattcaatcaatgatttgtgcgtcaatgttgcagatccggaaacatgagtttttcggtgacttaaattttatc 29279508  T
Q  180 atattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||||||||||| ||||| |||||||||||||  |||||||| ||||||||    
T  29279507 atattatttgtaggcattttgccgttttatgctattaactatggtgttgtgagtttgtt 29279449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 4041700 - 4041468
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaatt 110  Q
    ||||||||||||||| ||||||| ||| |||||||||  | |||| |   |||||| ||| | |||||||||||||||  |  | ||||||||  ||| |    
T  4041700 cgttgtgttgttcgtcgtcttgtacggcgtttgattttgcatcttgtcatggtgtttgttcggttcctattgaaagatttacattagtcaattgcaaact 4041601  T
Q  111 caattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatg 210  Q
    |||  |||||||||| |||| ||||||||||| || ||| ||| |||| ||  | ||||||  |||| |||||||||||||| |||||| | |||| |||    
T  4041600 caaccaatgatttggacgtcaacgttgcagatccgaaagcatgagtatttcgataacttaggctttatcatattatttgtagccattttgctgttgcatg 4041501  T
Q  211 ctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||| |||||||| |||||||| ||||    
T  4041500 ctattaacttaggtgttgtgagtttgttcgcag 4041468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 224
Target Start/End: Complemental strand, 23933726 - 23933512
Alignment:
Q  13 ttgtgttgttcgttgtcttgtgcggtgtt---tgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    |||||||| | ||||||||||||||||||   ||| ||  | |||| |||||||||||||||| ||| ||||||||| |||| |||||||||| | | ||    
T  23933726 ttgtgttggttgttgtcttgtgcggtgttgtttgaatttgcatcttgttgcggtgttcgtttggttcttattgaaagttcaacttcagtcaatcacagat 23933627  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||| ||| |||||| |||| ||||| || ||  ||||| |||| ||     |||| ||||| |||| ||||||||||||||| ||||| ||||||||     
T  23933626 tcaatcaattatttggacgtcaacgttacatatctggaagcatggataatctggtgatttagattttatcatattatttgtaggaattttgccgttgtaa 23933527  T
Q  210 gctattaacttgggt 224  Q
    |||||||||||||||    
T  23933526 gctattaacttgggt 23933512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 196
Target Start/End: Complemental strand, 39310957 - 39310774
Alignment:
Q  12 gttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattc 111  Q
    |||||||||||| | ||||||||| | |||||||||  || ||||| ||||| || ||||  ||||||||  |||||| | |||||||||||| ||||||    
T  39310957 gttgtgttgttcttcgtcttgtgcagcgtttgatttcgcgccttatcgcggtatttgtttagttcctatttgaagatcgacttcagtcaattacaaattc 39310858  T
Q  112 aattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcat 196  Q
    ||| | |||||||||| || || ||||| | || || | |||||||| ||||||||||||| |||| ||||||||||||||||||    
T  39310857 aatcattgatttgggcatcaacattgcaca-tccgaggcatgggtatttcagtgacttagattttatcatattatttgtaggcat 39310774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 238
Target Start/End: Original strand, 35220324 - 35220549
Alignment:
Q  16 tgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaatt 115  Q
    |||||||| | ||||||||||| |||||||||  ||| || |  |||||||| |||  ||||||||||||||||||  |||||| |||| ||||||||      
T  35220324 tgttgttcatcgtcttgtgcggcgtttgattttgcgttttgtcacggtgttcatttagttcctattgaaagatcaacatcagtccattacaaattcaacc 35220423  T
Q  116 aatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaattt--accat-attatttgtaggcattttaccgttgtatgct 212  Q
    ||||||||||||||| || ||||||||    ||| |||||||| || |||||||| |  ||  | |||   ||||||||||||||||  |||||||||||    
T  35220424 aatgatttgggcgtcaactttgcagatcttaaagcatgggtatttctgtgacttaaatcttgaagcatgggtatttgtaggcattttgtcgttgtatgct 35220523  T
Q  213 attaacttgggtgttgttagtttgtt 238  Q
    ||||||||||||| ||| ||||||||    
T  35220524 attaacttgggtgctgtgagtttgtt 35220549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 4 - 238
Target Start/End: Original strand, 36691861 - 36692095
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||| |||||||| | || | |||||  |||||||||  | |||| | |||||||||||||  || ||| ||||||||  |  || |||||||    
T  36691861 agtgcggcgttttgttgttcatcgtttagtgcgacgtttgatttcgcatcttgtcgcggtgttcgtttagtttctactgaaagattgacatcggtcaatt 36691960  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| || |||||||| |  ||| ||| | || || |||| ||||  |||| ||||||||||||||||||||| |||    
T  36691961 acaaattcaagcaatgatttggacgtcaacattgcagatcctaaagcatgtgaatttcggtgatttaggttttatcatattatttgtaggcattttgccg 36692060  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    || |||||||||||||||| |||||| ||||||||    
T  36692061 ttttatgctattaacttggttgttgtgagtttgtt 36692095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 7448234 - 7448421
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||  ||| || | ||| |||| |||   | ||| |||||||||| |  ||||||||||    
T  7448234 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcgatgtttgttcagtgcctcttgaaagatctacatcagtcaatt 7448333  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgta 191  Q
    | | ||||||  ||| |||||| |||| ||||||||||| |||||| ||| |||| |||||||||||   |||| |||||||||||||    
T  7448334 acatattcaaccaataatttggacgtcaacgttgcagatccggaagcatgagtatttcagtgacttaagttttatcatattatttgta 7448421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 96 - 224
Target Start/End: Complemental strand, 12677471 - 12677344
Alignment:
Q  96 agtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggca 195  Q
    ||||||||| ||||||||  ||||||||||||||| |||||| |||| |||||| ||| | || |  |||||||||  |||| ||||||| |||||||||    
T  12677471 agtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcatgtgaattttggtgacttaggttttatcatatta-ttgtaggca 12677373  T
Q  196 ttttaccgttgtatgctattaacttgggt 224  Q
    |||| ||||| ||||||||||||||||||    
T  12677372 tttttccgttttatgctattaacttgggt 12677344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 238
Target Start/End: Complemental strand, 18107848 - 18107629
Alignment:
Q  16 tgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaatt 115  Q
    |||||||||| ||||||||||| |||||||||  |||| |  ||||||||||||||| ||| |||||| |||| ||  ||| ||||| | | ||||||||    
T  18107848 tgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcatgctgcggtgttcgtttggttcatattgagagataaacctcactcaatcacagattcaatt 18107749  T
Q  116 aatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctatt 215  Q
    ||  ||||  ||||| |   | ||||| | |||| ||| |||| ||  |||||||||||| | |||||||||||||||||||||  |||| |||  ||||    
T  18107748 aacaatttatgcgtcaa---tacagatccagaagcatgtgtatttcgatgacttagaattaatcatattatttgtaggcattttgtcgttttatattatt 18107652  T
Q  216 aacttgggtgttgttagtttgtt 238  Q
    |||||| ||||||| ||||||||    
T  18107651 aacttgcgtgttgtgagtttgtt 18107629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 29574745 - 29574507
Alignment:
Q  3 gagtgcagcgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtc 99  Q
    |||||| |||||||||||||||| |||||||||||   ||||||||||  | | || |||| ||||| ||||||||| ||||||||||| |  |||||||    
T  29574745 gagtgcggcgttgtgttgttcgtcgtcttgtgcggcattgtttgatttcacattttgttgcagtgtttgtttgattcatattgaaagattagcttcagtc 29574646  T
Q  100 aattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatttt 199  Q
    ||| | | ||||||| |||||||||| || | ||||||||||| |||||| |||  |||     ||| ||||| || | |||||| ||||||| ||||||    
T  29574645 aatcacagattcaatcaatgatttggacgccaacgttgcagatccggaagcatgaatattatgatgatttagatttcatcatattttttgtagtcatttt 29574546  T
Q  200 accgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
      | || ||||||||||| ||||  ||||| ||||||||    
T  29574545 gtcattatatgctattaatttggacgttgtgagtttgtt 29574507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 106 - 238
Target Start/End: Complemental strand, 17994741 - 17994605
Alignment:
Q  106 aaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgt- 204  Q
    ||||||||| |||||||||| |||| |||||||| || |||||  || ||||| || |||||||| | |||| ||||||||||||||||||||| || |     
T  17994741 aaattcaatcaatgatttggacgtcaacgttgcacatccggaaccataggtatttcggtgacttaaattttatcatattatttgtaggcattttgccatt 17994642  T
Q  205 ---tgtatgctattaacttgggtgttgttagtttgtt 238  Q
       |||||||||||||||||| |||||| ||||||||    
T  17994641 gtatgtatgctattaacttggatgttgtgagtttgtt 17994605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 52 - 243
Target Start/End: Complemental strand, 28534019 - 28533828
Alignment:
Q  52 tcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagta 151  Q
    |||| |||||||||||||||||||||||||||||||  |  |||| ||||| | | ||||||| |||||||||| |||| || ||||| ||   |||  |    
T  28534019 tcttgttgcggtgttcgtttgattcctattgaaagacaagcttcactcaatcacagattcaataaatgatttggacgtcaactttgcaaatctagaaaca 28533920  T
Q  152 tgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    | | |||    |||| || || |||| ||||||||||||||| |||||  |||||||||||||||||||| ||||||| |||||||| ||||    
T  28533919 ttgatattcgggtgatttggattttatcatattatttgtaggtattttgtcgttgtatgctattaacttgagtgttgtgagtttgttcgcag 28533828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 34128803 - 34128558
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcag 97  Q
    |||||||| | ||| |||||||||| ||||||||||    |||||||||   |||||| ||| |||||| ||||| |||||||| ||||||| | || ||    
T  34128803 ctgagtgcggtgttatgttgttcgtcgtcttgtgcgacgttgtttgattgtgcgtcttgttgtggtgtttgtttggttcctattaaaagatcgactttag 34128704  T
Q  98 tcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatt 197  Q
    || |||||||||||||| ||| ||||||||||| | |||||| ||  | ||   ||||||| ||  | |||| || |||| |||||||||| ||||||||    
T  34128703 tcgattataaattcaatcaattatttgggcgtcaatgttgcatatctgaaatcttgggtatttcgattacttggattttatcatattatttataggcatt 34128604  T
Q  198 ttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||  ||  ||||| ||||||||||| | |||| || ||||||||||    
T  34128603 ttgtcgcagtatgttattaacttggatattgtgaggttgtttgcag 34128558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 130
Target Start/End: Original strand, 41327524 - 41327616
Alignment:
Q  38 tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtc 130  Q
    ||||||||||  ||| || |||||||||||||||| || ||||||||||||| |||||||||||||| ||||||||  |||||||||| ||||    
T  41327524 tgtttgatttcacgtattgttgcggtgttcgtttggtttctattgaaagatctatttcagtcaattacaaattcaaccaatgatttggacgtc 41327616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 235
Target Start/End: Complemental strand, 6358982 - 6358763
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattg--cggtgttcgtttgattcctattgaaagatcaatttcagtcaattat 105  Q
    ||||||||||||||| ||||||||| |   ||||||||||  | |||| |||  ||||||| ||||| ||| |||||||||||||| ||||| || | |     
T  6358982 cgttgtgttgttcgtcgtcttgtgcagcgttgtttgatttcgcatcttgttgtacggtgtttgtttggttcttattgaaagatcaacttcagacagtcac 6358883  T
Q  106 aaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgtt 205  Q
    |||||||||  || ||||||||||| |||||||| ||    | ||||   ||||   |||| ||||| |||| ||||||||||||| | |||||  ||||    
T  6358882 aaattcaatctataatttgggcgtcaacgttgcaaat----atgtat---tatg---gtgatttagattttatcatattatttgtacgtattttgtcgtt 6358793  T
Q  206 gtatgctattaacttgggtgttgttagttt 235  Q
    |||||||||||||||||||||||| |||||    
T  6358792 gtatgctattaacttgggtgttgtgagttt 6358763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 238
Target Start/End: Original strand, 37416702 - 37416931
Alignment:
Q  12 gttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaa 108  Q
    |||||||||||||| ||||||||||    ||||||||||  | |||| |||   |||||| ||| ||| |||||||| ||||| |  ||||||| | | |    
T  37416702 gttgtgttgttcgtcgtcttgtgcgacgttgtttgatttcacatcttgttgtaatgttcggttggttcatattgaaatatcaactcgagtcaatcacaga 37416801  T
Q  109 ttcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgta 208  Q
    |||||| ||||||||||  ||| || ||||||   |||||| ||| ||||   ||||| ||| | |||| |||||||||||||| |||||| ||||||||    
T  37416802 ttcaatcaatgatttggatgtcaacattgcaggcccggaagcatgtgtattctagtgatttatattttatcatattatttgtagacattttgccgttgta 37416901  T
Q  209 tgctattaacttgggtgttgttagtttgtt 238  Q
    || | |||||||||||||| | ||||||||    
T  37416902 tgttgttaacttgggtgttataagtttgtt 37416931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 238
Target Start/End: Original strand, 19597995 - 19598060
Alignment:
Q  173 atttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||| | ||||||    
T  19597995 atttatcatattatttgtagacattttaccgttgtatgctattaacttgagtgttgtgaatttgtt 19598060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 74 - 227
Target Start/End: Original strand, 41694678 - 41694831
Alignment:
Q  74 ttcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaa 173  Q
    ||||| |||||||||||  ||||| |||||| | ||||||| |||||||||||| || ||||||||||| | |||| |||   ||    ||||||||||     
T  41694678 ttcctgttgaaagatcagcttcagccaattacatattcaatcaatgatttgggcatcaacgttgcagatgcagaagcatgtagattctggtgacttagat 41694777  T
Q  174 tttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgtt 227  Q
    |||| |||||||||| ||||||||||  |||| |||| ||||||||| ||||||    
T  41694778 tttatcatattatttataggcattttgtcgttatatgttattaactttggtgtt 41694831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 227
Target Start/End: Original strand, 14423362 - 14423539
Alignment:
Q  54 ttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatg 153  Q
    ||||||||||||| ||||| ||| |||||||||||| | || ||||||||| | ||| ||| |||||||||| |||| |||||||| ||   |||  |||    
T  14423362 ttattgcggtgtttgtttggttcttattgaaagatcgactttagtcaattacagatttaatcaatgatttggacgtcaacgttgcaaatctagaaacatg 14423461  T
Q  154 ggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttg----tatgctattaacttgggtgtt 227  Q
    ||||| |  || | ||||| |||| |||||||| | |||||||||| ||||||    |||| ||||||||||||||||    
T  14423462 ggtatttaggttagttagattttatcatattatatttaggcattttgccgttgtatatatgttattaacttgggtgtt 14423539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 243
Target Start/End: Complemental strand, 9986413 - 9986195
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattca 112  Q
    |||||||||| |||||||||||   ||||||||||  ||||||  |||||||||| |||||||| |||||||||||| |||              |||||    
T  9986413 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgatt--------------attca 9986328  T
Q  113 attaatgatttgggcgtcgacgttgcagattcggaag-tatgggtatgtcagtgacttagaatttaccatat-tatttgtaggcattttaccgttgtatg 210  Q
    ||||| |||||||||||| |||||||||||||||| |  ||||||||  | || ||||  | |||| ||||| | |||||||||||| |  |||| ||||    
T  9986327 attaaagatttgggcgtcaacgttgcagattcggaggccatgggtattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatg 9986228  T
Q  211 ctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| |||||| |||||||| ||||    
T  9986227 ctattaacttggatgttgtgagtttgttcgcag 9986195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 36323854 - 36323941
Alignment:
Q  2 tgagtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    ||||||| || |||||||||| |||||||||||||| ||||||||| ||||||| |||   ||||| |||| ||||||||||||||||    
T  36323854 tgagtgcggctttgtgttgtttgttgtcttgtgcggcgtttgatttctcgtcttgttgaaatgttcatttggttcctattgaaagatc 36323941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 243
Target Start/End: Original strand, 16375979 - 16376165
Alignment:
Q  57 ttgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggt 156  Q
    ||||||| |||||||| |||||||||||||| |||   |||||| | | | ||||||| |||||||| |||||| | |||||||||||  ||| ||| ||    
T  16375979 ttgcggtattcgtttggttcctattgaaagaccaaaaccagtcagtcacagattcaatcaatgatttcggcgtcaaagttgcagattcaaaagcatgtgt 16376078  T
Q  157 atgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||     ||| ||| | |||| |||||||||||||| ||||||   ||||||||| |||||||||| || ||| |||||||| ||||    
T  16376079 attatgatgatttaaattttatcatattatttgtagtcattttggtgttgtatgcgattaacttggatgatgtgagtttgttcgcag 16376165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 4100493 - 4100561
Alignment:
Q  174 tttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||| ||||||||||||||||||||| |||||||||| ||||||||| |||||||| |||||||| ||||    
T  4100493 tttatcatattatttgtaggcattttgccgttgtatgatattaactt-ggtgttgtgagtttgttcgcag 4100561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 51 - 243
Target Start/End: Complemental strand, 19595969 - 19595774
Alignment:
Q  51 gtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagt 150  Q
    ||||| ||||| |||| ||||  ||| |||||||||||||  || | ||||| ||||||||||| ||||||||||||||| |  |||| |||  |||||     
T  19595969 gtcttgttgcgatgtttgtttagttcttattgaaagatcagctttaatcaatcataaattcaataaatgatttgggcgtcaaaattgccgatctggaagc 19595870  T
Q  151 atgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgc---tattaacttgggtgttgttagtttgtttgcag 243  Q
    |||  ||| |   ||| || || |||| ||||||||||||||| ||||| || ||||||||   ||||||||||| || ||| |||||||||||||    
T  19595869 atgaatattttgatgattttgattttatcatattatttgtaggtattttgcctttgtatgctattattaacttggatgctgtgagtttgtttgcag 19595774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 142
Target Start/End: Complemental strand, 42698807 - 42698676
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaatt 110  Q
    ||||||||||||||| |||||||| || |||||||||  |||||| | ||  |||| ||||  || ||||||||||||| |  ||||| ||||| |||||    
T  42698807 cgttgtgttgttcgtcgtcttgtgtggcgtttgattttgcgtcttgtcgcaatgtttgtttagtttctattgaaagatcgacatcagtgaattacaaatt 42698708  T
Q  111 caattaatgatttgggcgtcgacgttgcagat 142  Q
    |||| | |||||||| ||||  ||||||||||    
T  42698707 caatcagtgatttggacgtcagcgttgcagat 42698676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 3725190 - 3725266
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||||||||||| |||   |||||||||| |||||||  || |||||||||||||||| ||||||||||||    
T  3725190 tgttgttcgttgtcttgtacggcgttgtttgatttctcgtctttgtgtggtgttcgtttgattcatattgaaagatc 3725266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 136
Target Start/End: Complemental strand, 36175563 - 36175477
Alignment:
Q  50 cgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgtt 136  Q
    |||||| |||||||||||||||| || |||||||||||||||  |||  |||||| | ||||||| |||||||||| |||| |||||    
T  36175563 cgtcttgttgcggtgttcgtttggtttctattgaaagatcaacatcaaacaattacatattcaatcaatgatttggacgtcaacgtt 36175477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 4099090 - 4099175
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    ||||| |||||||||||||||||||||||||||| |||||||||  ||| || | | |||||| |||   ||||||||||||||||    
T  4099090 agtgcggcgttgtgttgttcgttgtcttgtgcggcgtttgattttgcgttttgtcgtggtgtttgttcagttcctattgaaagatc 4099175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 243
Target Start/End: Original strand, 8805957 - 8806094
Alignment:
Q  108 attcaattaatgatttgggcgtcgacgttgcagattcggaagt-atgggtatgtcagtgacttagaatttaccatat-tatttgtaggcattttaccgtt 205  Q
    ||||||| || ||||| |||||| |||||||||||||||| || |||| |||  | || ||||  | |||| ||||| | |||||||||||||| |||||    
T  8805957 attcaatcaaagattttggcgtcaacgttgcagattcggaggtcatggatattccggtcactttaattttatcatatatttttgtaggcattttgccgtt 8806056  T
Q  206 gtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
     |||||||||||||||| |||||| || ||||| ||||    
T  8806057 atatgctattaacttggatgttgtgagattgttcgcag 8806094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 228
Target Start/End: Original strand, 14416208 - 14416372
Alignment:
Q  65 ttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatg-atttgggcgtcgacgttgcagattcggaagtatgggtatgtcag 163  Q
    |||||||| ||||| |||||| ||| | |||||||||||| | ||||||| |||| |||||| | |  || ||||| ||||| ||| ||||||||   ||    
T  14416208 ttcgtttggttcctgttgaaatatcgacttcagtcaattacagattcaatcaatgaatttggacattaacattgcatattcgaaagcatgggtattagag 14416307  T
Q  164 tgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttg 228  Q
    |||| |||| |||| ||||||| ||||||| | |||  | ||||||| ||||||||| |||||||    
T  14416308 tgacatagattttatcatattaattgtagggagtttgtcattgtatgttattaacttaggtgttg 14416372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 12648028 - 12647967
Alignment:
Q  12 gttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtt 70  Q
    |||||||||||||| |||||||||||   |||||||||| ||||||| ||||||||||||||    
T  12648028 gttgtgttgttcgtcgtcttgtgcggcgttgtttgatttctcgtcttgttgcggtgttcgtt 12647967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 16484724 - 16484681
Alignment:
Q  77 ctattgaaagatcaatttcagtcaattataaattcaattaatga 120  Q
    |||||||||||||||||||| ||||||| |||||||||||||||    
T  16484724 ctattgaaagatcaatttcaatcaattacaaattcaattaatga 16484681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 243
Target Start/End: Original strand, 280946 - 281024
Alignment:
Q  166 acttagaatttaccatattatttgtaggcatttta-ccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| |||||||||||||    ||||  ||||||||||||||||||||||||| ||| |||||||| ||||    
T  280946 acttagaatttatcatattatttgtatatttttttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcag 281024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 13014885 - 13014819
Alignment:
Q  155 gtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttg 221  Q
    |||| ||||| |||||||||||| || ||||| |||||||||||| | || ||||||||||||||||    
T  13014885 gtatttcagtcacttagaatttatcacattatatgtaggcattttgctgtcgtatgctattaacttg 13014819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 26025481 - 26025405
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    ||||| |||| |||||||||||   |||||||||| ||||||| ||||||||||| |||||||| | ||||||||||    
T  26025481 tgttggtcgtcgtcttgtgcggcgttgtttgatttttcgtcttcttgcggtgttcatttgattcatcttgaaagatc 26025405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 27249222 - 27249146
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||   ||||||||||  ||||||  |||||||||| |||||||| ||||||||||||    
T  27249222 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 27249146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 45128214 - 45128294
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatt 93  Q
    |||||||||| |||||||||||   |||||| ||| || |||| ||||||||||| ||| ||||||||||||| |||||||    
T  45128214 tgttgttcgtcgtcttgtgcggcgttgtttgctttctcatcttcttgcggtgttcattttattcctattgaaatatcaatt 45128294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 30420688 - 30420763
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagat 88  Q
    |||||||||| |||||||||||   ||||||||||  ||||||  |||||||||| |||||||| |||||||||||    
T  30420688 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagat 30420763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 36234020 - 36234094
Alignment:
Q  18 ttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||| |||||||||||   ||||||||||  ||||||  |||||||||| |||||||| ||||||||||||    
T  36234020 ttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 36234094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 41327901 - 41327957
Alignment:
Q  179 catattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagttt 235  Q
    |||||||||||||||||||||  | ||||||||||||||||| |||| ||| |||||    
T  41327901 catattatttgtaggcattttggcattgtatgctattaacttaggtgatgtgagttt 41327957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 89
Target Start/End: Complemental strand, 459320 - 459269
Alignment:
Q  38 tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    ||||||||||  |||||| ||||||||||| |||||||| ||||||||||||    
T  459320 tgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagatc 459269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 242
Target Start/End: Original strand, 7604338 - 7604401
Alignment:
Q  179 catattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgca 242  Q
    |||||||||  ||| ||||||| | ||||||||||||||||||| |||||| | ||||||||||    
T  7604338 catattattcatagacattttatcattgtatgctattaacttggatgttgtaaatttgtttgca 7604401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 37614198 - 37614121
Alignment:
Q  14 tgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagat 88  Q
    |||||||||| | ||||||||||    ||||||||||  |||||| ||||||||||| |||||||| |||||||||||    
T  37614198 tgtgttgttcttcgtcttgtgcgtcgttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagat 37614121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 6173642 - 6173718
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    ||||||||||||||||||| ||   ||||||||||  | ||||  |||||||||| |||||||| ||||||||||||    
T  6173642 tgttgttcgttgtcttgtgtggcgttgtttgattttccatctttgtgcggtgttcatttgattcatattgaaagatc 6173718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 7015782 - 7015710
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaa 85  Q
    |||||||||| |||||||||||   ||||||||||  ||||||  |||||||||| |||||||| ||||||||    
T  7015782 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaa 7015710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 20047153 - 20047077
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||   ||||||||||   ||||| || |||||||| ||| |||||||||||||||||    
T  20047153 tgttgttcgtcgtcttgtgcggcgttgtttgatttcatgtcttcttacggtgttcattttattcctattgaaagatc 20047077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 41431038 - 41431114
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||   |||||| |||  |||||| ||||||||||| ||| ||||| |||||||||||    
T  41431038 tgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattccaattgaaagatc 41431114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 4228294 - 4228351
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| |  |||| |||||||||||||||| |||||| |||||||| ||||    
T  4228294 tttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcag 4228351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 7015621 - 7015564
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| | ||||| |||||||||||||||| || ||| |||||||| ||||    
T  7015621 tttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcag 7015564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 10548352 - 10548409
Alignment:
Q  182 attatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgttt 239  Q
    ||||||| ||||||||||   |||||||| ||||||||||| |||||| |||||||||    
T  10548352 attatttataggcattttgttgttgtatgttattaacttggatgttgtgagtttgttt 10548409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 21570318 - 21570261
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| | |||||||||||||||||||||  || ||| |||||||| ||||    
T  21570318 tttgtaggcattatgccgttgtatgctattaacttgaatgctgtaagtttgttcgcag 21570261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 27249061 - 27249004
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||| ||||| | ||||| |||||||||||||||| |||||| |||||||| ||||    
T  27249061 tttgtacgcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcag 27249004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 31580565 - 31580508
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| | ||||| |||||||||||||||| || ||| |||||||| ||||    
T  31580565 tttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgcag 31580508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 32190821 - 32190890
Alignment:
Q  174 tttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||| ||||||||||||| ||||||| |  |||||||||||||||||   |||||| ||||| |||||||    
T  32190821 tttatcatattatttgtaagcatttttctattgtatgctattaacttaaatgttgtgagtttatttgcag 32190890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 225
Target Start/End: Complemental strand, 42698661 - 42698616
Alignment:
Q  180 atattatttgtaggcattttaccgttgtatgctattaacttgggtg 225  Q
    |||||||||||||||||| |||||||| ||| |||||| |||||||    
T  42698661 atattatttgtaggcattataccgttgcatgttattaatttgggtg 42698616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #95
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 114
Target Start/End: Original strand, 11812704 - 11812780
Alignment:
Q  38 tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaat 114  Q
    ||||||||||   ||||| ||||||||||  |||||||||||| |||||||||  ||||||| |||| | |||||||    
T  11812704 tgtttgattttgtgtcttgttgcggtgtttatttgattcctatagaaagatcagcttcagtcgattacagattcaat 11812780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #96
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 27949438 - 27949516
Alignment:
Q  18 ttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatt 93  Q
    |||||||| ||||||| |||   ||||||||||  |||||| ||||| ||||| |||||||| ||| ||||||||||||    
T  27949438 ttgttcgtcgtcttgtacggcgttgtttgatttcccgtcttcttgcgatgttcatttgattcatatcgaaagatcaatt 27949516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #97
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 27949613 - 27949649
Alignment:
Q  202 cgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  27949613 cgttgtatgctattaacttggatgttgtgagtttgtt 27949649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 107; Significance: 1e-53; HSPs: 110)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 5 - 243
Target Start/End: Complemental strand, 21533920 - 21533682
Alignment:
Q  5 gtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatta 104  Q
    |||| |||||||||||||||| ||||||| ||| ||||| |||  |||||| | |||||||| ||||  |||||||||||||||| |  |||||| | ||    
T  21533920 gtgcggcgttgtgttgttcgtcgtcttgtacggcgtttggtttcgcgtcttgtcgcggtgtttgtttagttcctattgaaagatctacatcagtcgacta 21533821  T
Q  105 taaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgt 204  Q
     ||||||||  ||| ||||||||||| ||||||||||| |||||| |||||||| || |||||||||  |||| ||||||||||||||||||||| ||||    
T  21533820 caaattcaaccaataatttgggcgtcaacgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcattttgccgt 21533721  T
Q  205 tgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||||||||||||||||| ||| |||||||| ||||    
T  21533720 tgtatgctattaacttgggtgctgtgagtttgttcgcag 21533682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 14 - 243
Target Start/End: Complemental strand, 52923219 - 52922990
Alignment:
Q  14 tgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaa 113  Q
    |||||||||||| ||||||||||| |||||||||  ||| || | |||||||| |||   ||||| |||||||||| || | ||||||||| ||||||||    
T  52923219 tgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatctatattagtcaattacaaattcaa 52923120  T
Q  114 ttaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgcta 213  Q
      |||||||||| |||| ||||||||||| |||||| |||||||| || ||||||||   |||| |||||||||||||||||||||||||||||||||||    
T  52923119 ccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttaccgttgtatgcta 52923020  T
Q  214 ttaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||||| || ||| |||||||| ||||    
T  52923019 ttaacttggctgctgtgagtttgttcgcag 52922990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 33579856 - 33580095
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    |||||||||||||||||||||| |||||||||   |||||||||  |||||| | |||||||||||||  ||| |||||||||||| |  ||||||||||    
T  33579856 agtgcagcgttgtgttgttcgtcgtcttgtgcatcgtttgattttgcgtcttgtcgcggtgttcgtttatttcatattgaaagatcgacatcagtcaatt 33579955  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  ||||||||||||||| |||||| |||| |||||| | | | || || |||| ||||  |||| ||||||||||||||||||||| |||    
T  33579956 acaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcacgtgaatttcggtgatttaggttttatcatattatttgtaggcattttgccg 33580055  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    || ||||||||||||||||||||||| | |||||| ||||    
T  33580056 ttttatgctattaacttgggtgttgtgattttgttcgcag 33580095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 4 - 238
Target Start/End: Original strand, 9998443 - 9998677
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||  ||| || | |||||||| ||||  ||||| |||||||||| |  ||||||||||    
T  9998443 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgtttagttcctcttgaaagatctacatcagtcaatt 9998542  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||  ||  |||||||||||| | |||| |||||||| || ||||||||   |||| ||||||||||||||||||||| |||    
T  9998543 acaaattcaaccaatgatttgcacgatgacgttgcagatccagaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgccg 9998642  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||||||||||||| ||| ||||||||    
T  9998643 ttgtatgctattaacttgggtgctgtgagtttgtt 9998677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 6954808 - 6954569
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||||| |||||||| ||||||||||| |||||||||  ||| || |  ||||||| |||   |||||||||||||||| |  ||||||||||    
T  6954808 agtgcggcgttgtattgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcacggtgtttgttcagttcctattgaaagatctacatcagtcaatt 6954709  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| | | ||||||| |||||| |||||||| || ||||||||   |||| || |||||||||||||||||| |||    
T  6954708 acaaattcaaccaatgatttggacgtcaatgctgcagatccggaagcatgggtatttcggtgacttatgttttatcaaattatttgtaggcattttgccg 6954609  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||||||||| ||| |||||||||||||    
T  6954608 ttgtatgctattaacttgggtgctgtgagtttgtttgcag 6954569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 12 - 243
Target Start/End: Complemental strand, 20465074 - 20464843
Alignment:
Q  12 gttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattc 111  Q
    |||||||||||||| ||||||| ||| |||||||||  |||||| | ||||||||| ||| | ||||||||||||||| |||||||||||||| ||||||    
T  20465074 gttgtgttgttcgtcgtcttgtacggcgtttgattttgcgtcttgtcgcggtgttcatttaaatcctattgaaagatcgatttcagtcaattacaaattc 20464975  T
Q  112 aattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgc 211  Q
    ||| ||||||||||||||| | |||||||||| | ||| ||| |||| || |||||||| | |||| ||||||||||||  |||||||  ||| ||||||    
T  20464974 aataaatgatttgggcgtcaatgttgcagatttgaaagcatgagtatttcggtgacttaaattttatcatattatttgtgtgcattttgtcgtcgtatgc 20464875  T
Q  212 tattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||| ||| | | |||||||| ||||    
T  20464874 tattaacttgtgtgatatgagtttgttcgcag 20464843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 10 - 237
Target Start/End: Complemental strand, 23800016 - 23799789
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    |||||||||| || || ||||||||||| |||||||||  |||||| | || ||||||| ||  ||||| |||||||| | |   |||||||||| ||||    
T  23800016 gcgttgtgttcttagtcgtcttgtgcggcgtttgatttcgcgtcttgtcgcagtgttcgcttagttcctgttgaaagaacgacaccagtcaattacaaat 23799917  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||| |||||||| |||||| ||||||||||| || ||  ||| |||| ||| ||||||||| |||| ||||||||||||||||||||| |||||||||    
T  23799916 tcaatcaatgatttcggcgtcaacgttgcagatccgaaaacatgagtatttcaatgacttagattttatcatattatttgtaggcattttgccgttgtat 23799817  T
Q  210 gctattaacttgggtgttgttagtttgt 237  Q
    | |||||||||||||||||| |||||||    
T  23799816 gttattaacttgggtgttgtgagtttgt 23799789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 48650846 - 48650607
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| || |||||||||||||||||||||||||  ||||||||  |||||| | |||||||| |||   ||||||||||||||||    ||| ||||||    
T  48650846 agtgcggcattgtgttgttcgttgtcttgtgcggcatttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctgcatcaatcaatt 48650747  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  ||| |||||| |||| |||||||||||  | ||| ||| |||| || ||||||||   |||| ||||||||||||||||||||| |||    
T  48650746 acaaattcaaccaataatttggacgtcaacgttgcagatctgaaagaatgagtatttcggtgacttaagttttatcatattatttgtaggcattttgccg 48650647  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||||||||||||| |||||||| ||||    
T  48650646 ttgtatgctattaacttgggtgttgtgagtttgttcgcag 48650607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 9797633 - 9797410
Alignment:
Q  17 gttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaatta 116  Q
    ||||||||| ||||||||||| |||||||||  |||||| | |||||||| |||   |||||||||||||||| |  ||| ||||||| ||||||||  |    
T  9797633 gttgttcgtcgtcttgtgcggcgtttgattttgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagca 9797534  T
Q  117 atgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctatta 216  Q
    ||||||||  |||  ||||||||||| |||||| |||||||| | ||||| |||   |||| |||||||||||||||||||||  |||||||||||||||    
T  9797533 atgatttgaacgttaacgttgcagatccggaagcatgggtatttaagtgatttatgttttatcatattatttgtaggcattttgtcgttgtatgctatta 9797434  T
Q  217 acttgggtgttgttagtttgtttg 240  Q
    ||||||||| ||| ||||||||||    
T  9797433 acttgggtgctgtgagtttgtttg 9797410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 238
Target Start/End: Original strand, 40487301 - 40487535
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgttt-gatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaat 102  Q
    ||||| |||||||||||||||| ||||||||||| |||| |||||  |||||| | |||||||| |||   |||||||||||||||| |  |||||||||    
T  40487301 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgttttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatcagtcaat 40487400  T
Q  103 tataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttacc 202  Q
     | |||||||   |||||||||| |||| || |||||||| |||||| || ||||| || |||||||||  |||| ||||||||||||||||||||| ||    
T  40487401 -acaaattcagccaatgatttggacgtcaacattgcagatccggaagcataggtatttcggtgacttaggttttatcatattatttgtaggcattttgcc 40487499  T
Q  203 gttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    ||| |||| |||||||||||||||||| ||||||||    
T  40487500 gttatatgttattaacttgggtgttgtgagtttgtt 40487535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 58 - 243
Target Start/End: Complemental strand, 51303701 - 51303516
Alignment:
Q  58 tgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggta 157  Q
    ||||||||||||||| ||  |||||||||||||  ||| | |||| | ||||||||| ||||||||||||||| ||||||||||| | |||| |||||||    
T  51303701 tgcggtgttcgtttggtttgtattgaaagatcagcttctgacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggta 51303602  T
Q  158 tgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |    |||| ||||| || | ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||    
T  51303601 ttctggtgatttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcag 51303516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 58 - 238
Target Start/End: Original strand, 51923757 - 51923937
Alignment:
Q  58 tgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggta 157  Q
    ||||||||||||||| ||| |||||||||||||  ||||| ||||   ||||||||| |||||||||| |||| ||||||||||| | |||| |||||||    
T  51923757 tgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcgcaaattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggta 51923856  T
Q  158 tgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |    |||| ||||| || | ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  51923857 ttctggtgatttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgtt 51923937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 38545782 - 38546009
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaatt 110  Q
    ||||||||||||||| ||||||||||| |||||||||  |||||| | |||||||| ||||  || | ||||||||||| |  ||||||||||| |||||    
T  38545782 cgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgcggtgtttgtttattttccattgaaagatcgacatcagtcaattacaaatt 38545881  T
Q  111 caattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatg 210  Q
    |||  ||||||||||||||| |||||| |||| || ||  ||| | || |  |||||||||  |||| ||||||||||||||||||||| ||||| ||||    
T  38545882 caaccaatgatttgggcgtcaacgttgaagatccgaaaacatgcgaatttaggtgacttaggttttatcatattatttgtaggcattttgccgttttatg 38545981  T
Q  211 ctattaacttgggtgttgttagtttgtt 238  Q
    ||||||||||||||| ||  ||||||||    
T  38545982 ctattaacttgggtggtgggagtttgtt 38546009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 238
Target Start/End: Original strand, 10233046 - 10233280
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||  ||| || | |||||||| |||   ||||| |||||||||| |  ||||||||||    
T  10233046 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatctacatcagtcaatt 10233145  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||| | ||   ||||||||||| | |||  ||| |||| || ||||||||   |||| ||||||||||||||||||||| |||    
T  10233146 acaaattcaaccaatgatttagacgataacgttgcagatccagaaacatgagtatttcggtgacttaagttttatcatattatttgtaggcattttgccg 10233245  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||||||||||||| ||| ||||||||    
T  10233246 ttgtatgctattaacttgggtgctgtgagtttgtt 10233280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 7546645 - 7546830
Alignment:
Q  58 tgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggta 157  Q
    ||||||||||||||| ||| ||||||||||||| |||||| |||| | ||||||| | ||||||||| ||||| ||||||| ||| |  ||| |||||||    
T  7546645 tgcggtgttcgtttggttcgtattgaaagatcagtttcagacaatcacaaattcagtcaatgatttgagcgtcaacgttgccgatccaaaagcatgggta 7546744  T
Q  158 tgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |    |||| ||||| || | ||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  7546745 ttctggtgatttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcag 7546830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 11 - 224
Target Start/End: Original strand, 19339159 - 19339371
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaatt 110  Q
    |||||||||||||||   ||||||||| |||| ||||  |||||| | | || ||||||||  |||||||||||||||||| || ||||||||| |||||    
T  19339159 cgttgtgttgttcgtcaacttgtgcggcgtttaatttcacgtcttgtcgtggcgttcgtttagttcctattgaaagatcaactttagtcaattacaaatt 19339258  T
Q  111 caattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatg 210  Q
    |||| |||||||| || ||| | ||||||||| | |||| |||||||| || |||||||||| |||| |||||||| ||||||||||||  |||||||||    
T  19339259 caatcaatgatttaggtgtcaatgttgcagatccagaagcatgggtatttc-gtgacttagattttatcatattatctgtaggcattttgtcgttgtatg 19339357  T
Q  211 ctattaacttgggt 224  Q
     |||||||||||||    
T  19339358 ttattaacttgggt 19339371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 10 - 243
Target Start/End: Complemental strand, 43488696 - 43488463
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    |||||||||||||||| ||||||||||| |||||||||  |||||| |||||||||| |||   || ||||||||| |||    | | ||||||||||||    
T  43488696 gcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgttgcggtgtttgttcagtttctattgaaatatctgcattaatcaattataaat 43488597  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||  |||||||||  |||| ||||||||||| |||||| ||| |||| || |||| ||||  |||| |||||||||| ||||| |||| |||||||||    
T  43488596 tcaagcaatgatttgaacgtcaacgttgcagatccggaagcatgagtatttcggtgatttaggttttatcatattatttttaggctttttgccgttgtat 43488497  T
Q  210 gctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||| ||||||| ||| |||||||| ||||    
T  43488496 gctattaatttgggtgctgtgagtttgttcgcag 43488463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 52 - 217
Target Start/End: Original strand, 48199801 - 48199966
Alignment:
Q  52 tcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagta 151  Q
    |||| ||| |||||||||||| |||||||||||||||||| |||| ||||||||||||| ||| |||||||||| ||||||||||||| || | |||| |    
T  48199801 tcttgttgtggtgttcgtttggttcctattgaaagatcaacttcaatcaattataaatttaatcaatgatttggacgtcgacgttgcaaatccagaagca 48199900  T
Q  152 tgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaa 217  Q
    || | || || ||||||||||||||| |||||||| |||||||||||| || || |||||||||||    
T  48199901 tgtgcatttcggtgacttagaatttatcatattatctgtaggcattttgcctttatatgctattaa 48199966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 59 - 243
Target Start/End: Complemental strand, 46304577 - 46304393
Alignment:
Q  59 gcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtat 158  Q
    |||||||| ||||  |||||||||||| ||| |  ||||||||||| ||||||||  |||||||| |||||| || |||||||| |||||| ||||||||    
T  46304577 gcggtgtttgtttagttcctattgaaatatctacatcagtcaattacaaattcaaccaatgatttaggcgtcaacattgcagatccggaagcatgggtat 46304478  T
Q  159 gtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
     || |||||||||  |||| |||||||| ||||||||| || ||||||||||||||||||||| ||||||| |||||||| ||||    
T  46304477 ttcggtgacttaggttttatcatattatatgtaggcatgttgccgttgtatgctattaacttgagtgttgtgagtttgttcgcag 46304393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 4 - 238
Target Start/End: Original strand, 10229452 - 10229686
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||||||||||||||  |||||||||| |||||||||  ||| || | |||||||| |||   ||||| |||||||||| |  ||||||||||    
T  10229452 agtgcggcgttgtgttgttcgtcatcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatctacatcagtcaatt 10229551  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| ||   ||||||||||| |  ||| |||  ||| || ||||||||   |||| ||||||||||||||||||||| |||    
T  10229552 acaaattcaaccaatgatttggacgataacgttgcagatccaaaagcatgattatttcggtgacttaagttttatcatattatttgtaggcattttgccg 10229651  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||||||||||||| ||| ||||||||    
T  10229652 ttgtatgctattaacttgggtgctgtgagtttgtt 10229686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 4 - 238
Target Start/End: Complemental strand, 12149896 - 12149662
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||||| |||||| | ||||||||| | |||||||||  |||||| | ||| |||||||||  |||||||||||||||| |  ||||||  ||    
T  12149896 agtgcggcgttgtattgttcatcgtcttgtgcagcgtttgatttcgcgtcttgtcgcgatgttcgtttagttcctattgaaagatcgacatcagtctctt 12149797  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  ||||||||||||||| |||||||||||  ||||| |||||||| || |||| |||   |||| ||||||| | ||||||||||| |||    
T  12149796 acaaattcaaccaatgatttgggcgtcaacgttgcagatctggaagaatgggtatttcggtgaattatgttttatcatattaatcgtaggcattttgccg 12149697  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||||| ||||||  ||| ||||||||    
T  12149696 ttgtatgctattaagttgggtactgtgagtttgtt 12149662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 10 - 238
Target Start/End: Original strand, 47896134 - 47896361
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    |||||||||||||||||||||||||||| |||||||||  |||||| | ||||| || ||||  |||||||||||||||  |  ||||||||||| ||||    
T  47896134 gcgttgtgttgttcgttgtcttgtgcggcgtttgatttcacgtcttgtcgcggtatttgtttagttcctattgaaagatttacatcagtcaattacaaat 47896233  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||  ||||||||||||||  | |||||| || |||||| |||  ||| ||  | ||||||  |||| | ||||||||||| |||||||  ||||||||    
T  47896234 tcaaccaatgatttgggcgtaaatgttgcatatccggaagcatgaatatttcgataacttaggttttatcttattatttgta-gcattttgtcgttgtat 47896332  T
Q  210 gctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||| ||||||| ||||||||    
T  47896333 gctattaacttgagtgttgtgagtttgtt 47896361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 235
Target Start/End: Complemental strand, 45568557 - 45568326
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| |||||||| || |||||||||  |||||| |  ||||||| |||   ||||| |||||| | | |  ||| ||||||    
T  45568557 agtgcggcgttgtgttgttcgtcgtcttgtgtggcgtttgatttcgcgtcttgtcacggtgtttgttcagttcctgttgaaataactacatcaatcaatt 45568458  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| || |||||||| |||||| |||| ||| |  |||| ||||  |||| ||||||||||||||||||||| |||    
T  45568457 acaaattcaaacaatgatttggacgtcaactttgcagatccggaagcatggatatttgggtgatttaggttttatcatattatttgtaggcattttgccg 45568358  T
Q  204 ttgtatgctattaacttgggtgttgttagttt 235  Q
    |||||||||||||||||||||| ||| |||||    
T  45568357 ttgtatgctattaacttgggtgatgtgagttt 45568326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 13 - 243
Target Start/End: Complemental strand, 53807963 - 53807731
Alignment:
Q  13 ttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    ||||||||||||| ||||| |||||   ||||||||||  | |||| |||| ||||||||| | ||| |||||||||||||| |||||||||| | | ||    
T  53807963 ttgtgttgttcgtcgtcttctgcggcattgtttgatttggcatcttgttgctgtgttcgttgg-ttcatattgaaagatcaacttcagtcaatcacagat 53807865  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||| |||||||||| |||| |||||||| || | |||| | | ||||    |||| ||||| | || ||||||||||||||||||||| |||||||||    
T  53807864 tcaatcaatgatttggacgtcaacgttgcatatccagaagcaagagtattctggtgatttagattatatcatattatttgtaggcattttgccgttgtat 53807765  T
Q  210 gctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||| ||| |||||||| ||||    
T  53807764 gctattaacttgggtggtgtgagtttgttcgcag 53807731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 238
Target Start/End: Original strand, 10108212 - 10108446
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||  ||| || | |||||||| | |   ||||| |||||||||| |  ||||||||||    
T  10108212 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgctcagttcctcttgaaagatctacatcagtcaatt 10108311  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||  ||   ||||||||||| | || | ||| |||| || | ||||||   |||| ||||||||||||||||||||| |||    
T  10108312 acaaattcaaccaatgatttgaacgataacgttgcagatccagatgcatgagtatttcggcgacttaagttttatcatattatttgtaggcattttgccg 10108411  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||||||||||||| ||| ||||||||    
T  10108412 ttgtatgctattaacttgggtgctgtgagtttgtt 10108446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 238
Target Start/End: Original strand, 21313020 - 21313246
Alignment:
Q  12 gttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattc 111  Q
    |||||||||||||| |||||||  |   ||||||||  ||| || | |||||||||||||  || ||||||||| |||  | ||||||||||| ||||||    
T  21313020 gttgtgttgttcgtcgtcttgtctgacttttgatttcacgttttgtcgcggtgttcgtttagtttctattgaaatatcggtatcagtcaattacaaattc 21313119  T
Q  112 aattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgc 211  Q
    ||| |||||||||| |||| |||| ||| ||  | ||  ||| |||| || |||||||||| |||| |||||||||||||| |||||| |||||||||||    
T  21313120 aatcaatgatttggacgtcaacgtagcatatctgaaatcatgagtatttcggtgacttagattttatcatattatttgtagccattttgccgttgtatgc 21313219  T
Q  212 tattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||||| ||| ||||||||    
T  21313220 tattaacttgggtgctgtgagtttgtt 21313246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 77 - 243
Target Start/End: Original strand, 21431662 - 21431828
Alignment:
Q  77 ctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaattt 176  Q
    ||||||||||||| |  ||||||||||| ||||||||  || ||||||| |||| ||||||||||| |||||| |||||||| || ||||||||   |||    
T  21431662 ctattgaaagatctacatcagtcaattacaaattcaaccaacgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagtttt 21431761  T
Q  177 accatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    | ||||||||||||||||||||| |||||||||| |||||||||||||| ||| || ||||| ||||    
T  21431762 atcatattatttgtaggcattttgccgttgtatgatattaacttgggtgctgtgagattgttcgcag 21431828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 62 - 243
Target Start/End: Original strand, 8914746 - 8914927
Alignment:
Q  62 gtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtc 161  Q
    ||||||||||| ||| ||||||||||| |  ||||| |||| | ||||||||| ||||||||||||||| ||||||||||| | |||| ||| ||||       
T  8914746 gtgttcgtttggttcgtattgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagaatgtgtattct 8914845  T
Q  162 agtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
     |||| ||||| || | ||||||||||||||||||||| ||||||||||||||||||||| ||| ||| |||||||| ||||    
T  8914846 ggtgatttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttgagtgatgtgagtttgttcgcag 8914927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 21289926 - 21289687
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttat----tgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||||| |||||||||||||||||||   ||||||||||  | |||| |    ||||||||||||||| ||| |||||||||||||  ||||| ||||     
T  21289926 cgttgtggtgttcgttgtcttgtgcggcgttgtttgattttgcatcttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatc 21289827  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||| |||||||| || ||| |||||||||||   |||| |||| |||    || | ||||| || | ||||||||||||||||||||| |||    
T  21289826 acaaattcaatcaatgattttggtgtcaacgttgcagatctagaagcatggatattctggtaatttagatttcatcatattatttgtaggcattttgccg 21289727  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||||||||| ||| |||||||| ||||    
T  21289726 ttgtatgctattaacttgggtgctgtgagtttgttcgcag 21289687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 27 - 243
Target Start/End: Original strand, 32701490 - 32701706
Alignment:
Q  27 gtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttggg 126  Q
    ||||||||||| |||||||||  ||| || ||||| |||| |||   |||||||||||||||| |  |||  |||||| ||||||||| |||||||||||    
T  32701490 gtcttgtgcggcgtttgatttcgcgttttgttgcgatgtttgttcagttcctattgaaagatctacatcaaccaattacaaattcaatcaatgatttggg 32701589  T
Q  127 cgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgt 226  Q
    |||| |||||| |||| |||||| |||||||| || | ||||||   ||||  ||||||| |||||||||||| |||||||||||||| ||||||| ||     
T  32701590 cgtcaacgttgtagatccggaagcatgggtatttcggcgacttaagttttatgatattatctgtaggcattttgccgttgtatgctatgaacttggatgc 32701689  T
Q  227 tgttagtttgtttgcag 243  Q
    ||| |||||||| ||||    
T  32701690 tgtgagtttgttcgcag 32701706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 53099773 - 53099999
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaatt 110  Q
    |||||||||||| ||  |||||||||| |||||||||  |||||| | || || ||| |||  |||||||||||||||||   | ||||||||| || ||    
T  53099773 cgttgtgttgttagtcatcttgtgcggcgtttgatttcacgtcttgtcgccgtattcatttagttcctattgaaagatcagcatgagtcaattacaagtt 53099872  T
Q  111 caattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatg 210  Q
    |||| ||||||||||||||| ||||| || || |||||| ||| | ||  |||||||||||| |||| ||||||||||||| |||||||  |||||||||    
T  53099873 caatcaatgatttgggcgtcaacgttacatatccggaagcatgtgaattccagtgacttagattttagcatattatttgta-gcattttgtcgttgtatg 53099971  T
Q  211 ctattaacttgggtgttgttagtttgttt 239  Q
     ||||||||| |||||||| |||||||||    
T  53099972 ttattaactt-ggtgttgtgagtttgttt 53099999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 132 - 243
Target Start/End: Original strand, 4711586 - 4711697
Alignment:
Q  132 acgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgtta 231  Q
    ||||||||||| |||||| |||||||| || ||||||||   |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  4711586 acgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtga 4711685  T
Q  232 gtttgtttgcag 243  Q
    ||||||||||||    
T  4711686 gtttgtttgcag 4711697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 10 - 221
Target Start/End: Complemental strand, 12050754 - 12050543
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    ||||| |||||||||| ||||||||||| ||||||||| || |||| | |||||||| ||||  ||||||||| || ||| |  || |||||||| ||||    
T  12050754 gcgttttgttgttcgtcgtcttgtgcggcgtttgatttctcctcttgtcgcggtgtttgtttagttcctattggaatatctacatcggtcaattacaaat 12050655  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||  ||||||||||| ||| ||||||||||| |||||  ||| |||| || | |||||||  |||| ||||||||||||| |||||||  ||||||||    
T  12050654 tcaaccaatgatttgggtgtcaacgttgcagatccggaaacatgagtatttcggggacttaggttttatcatattatttgtaagcattttgtcgttgtat 12050555  T
Q  210 gctattaacttg 221  Q
    | ||||||||||    
T  12050554 gttattaacttg 12050543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 14859463 - 14859705
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtca 100  Q
    |||||||| | ||||||||||||||  ||||||| |   ||| ||||  | |||| ||||||||||| |||| ||| |||||||||||||  |||| |||    
T  14859463 ctgagtgcggtgttgtgttgttcgtcatcttgtgtgacatttaattttgcatcttgttgcggtgttcatttggttcatattgaaagatcagcttcaatca 14859562  T
Q  101 attataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatttta 200  Q
    || | | ||||||| |||||||||| |||| ||||||||||| | |||| |||||||| |  || | ||||| |||| | ||||||| || ||||||||     
T  14859563 atcacatattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattttggtaatttagattttatcgtattattggttggcattttg 14859662  T
Q  201 ccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
     |||||||||||||||||||||||||||| || ||||| ||||    
T  14859663 tcgttgtatgctattaacttgggtgttgtgagattgttagcag 14859705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 47042154 - 47041921
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttatt-gcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    ||||||||||||||| ||||||||||| |||||||||  ||| ||  | ||||||||| |||  |||||||||||||||||   ||||||| ||| ||||    
T  47042154 cgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtttttgtagcggtgttcatttatttcctattgaaagatcagcatcagtcagttacaaat 47042055  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||  |||| |||||||||| |||||| |||| |||||| ||| | || |  |||||||||  || | |||||||||||||||| ||||| |||| |||    
T  47042054 tcaaccaatggtttgggcgtcaacgttgaagatccggaagcatgtgaattttggtgacttaggtttcatcatattatttgtaggcgttttatcgttttat 47041955  T
Q  210 gctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||||||| |||| | | |||||||| ||||    
T  47041954 gctattaacttaggtgatatgagtttgttcgcag 47041921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 36461543 - 36461310
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||  |||||| | |||||||| |||   |||||||||||||||| |  ||| ||||||    
T  36461543 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgcggtgtttgttctgttcctattgaaagatctacatcaatcaatt 36461444  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| ||||| |||||  ||||| ||| |||| || | || ||||  |||| |||||||||||||| ||||          
T  36461443 acaaattcaagcaatgatttggacgtcaacgttacagatctggaagcatgagtatttcggcgatttaggttttatcatattatttgtagccatt------ 36461350  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||||| ||| ||| |||||||| ||||    
T  36461349 ttgtatgctattaacttgagtgctgtgagtttgttagcag 36461310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 40556688 - 40556917
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||           |||||||| |||   ||||| |||||||||| |  ||||||||||    
T  40556688 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttc----------gcggtgtttgttcagttcctcttgaaagatctacatcagtcaatt 40556777  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| |||||| | || |||||| ||| |||| |  ||||||||   |||| ||||||||||||||||||||| |||    
T  40556778 acaaattcaaccaatgatttggacgtcaacgttgtaaatccggaagcatgtgtattttggtgacttaagttttatcatattatttgtaggcattttgccg 40556877  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||  ||||||||||||| |||||||| ||||    
T  40556878 ttgtatgctatgcacttgggtgttgtgagtttgttcgcag 40556917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 38860225 - 38859985
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttc------agtcaatta 104  Q
    |||| |||||||||| ||||||||||| | |||||||  |||||| | |||||||| ||||  ||||||||| |||||| |  ||      |||| ||||    
T  38860225 cgttttgttgttcgtcgtcttgtgcggcgattgatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatctacatcagtcgatta 38860126  T
Q  105 taaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtca--gtgacttagaatttaccatattatttgtaggcattttacc 202  Q
     ||||||||  ||||| |||| |||| ||||||||||| || ||  |||||||| |    |||||||||  |||| ||||||||||||||||||||| ||    
T  38860125 caaattcaaccaatgacttggtcgtcaacgttgcagatccgaaaacatgggtatattttggtgacttaggttttatcatattatttgtaggcattttgcc 38860026  T
Q  203 gttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||||||||||||||||||||||| |||||||| ||||    
T  38860025 gttgtatgctattaacttgggtgttgtgagtttgttcgcag 38859985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 243
Target Start/End: Complemental strand, 20609005 - 20608776
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    ||||||||||||| || |||||||||||  ||||||||  |||||| | |||||||| ||||  |||||||||||| |||||  | ||||| ||| || |    
T  20609005 gcgttgtgttgttagtcgtcttgtgcggcatttgattttgcgtcttgtcgcggtgtttgtttagttcctattgaaatatcaacattagtcatttacaagt 20608906  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||| ||||||||| || || | ||||||||| |||||| ||| | || || |||| ||||| ||||  |||||| ||| || |||||| |||||||||    
T  20608905 tcaatcaatgatttgagcatcaaagttgcagatccggaagcatgagaatttcggtgatttagattttattatattacttgcagacatttttccgttgtat 20608806  T
Q  210 gctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||||    |||||||| |||||||||||||    
T  20608805 gctattaa----ggtgttgtgagtttgtttgcag 20608776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 54148967 - 54149206
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtctt-gtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaat 102  Q
    ||||| || ||||||||||||| ||||  ||||||  ||||||||  ||| || | |||||||| ||||  |||||||||||||||| |  ||| ||| |    
T  54148967 agtgcggcattgtgttgttcgtcgtctaagtgcggcatttgatttcgcgtattgtcgcggtgtttgtttagttcctattgaaagatctacatcaatca-t 54149065  T
Q  103 tataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttacc 202  Q
    || |||||  |  ||||||||||||||| ||||||||||| |||||| |||| ||| || ||||||| || |||| ||||||||||||||||||| |  |    
T  54149066 tacaaatttcaccaatgatttgggcgtcaacgttgcagatccggaagcatggctatttcggtgacttggattttatcatattatttgtaggcattatgtc 54149165  T
Q  203 gttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||| |||||| ||| |||| ||| ||||    
T  54149166 gttgtatgctattaacctgggtgatgtgagttagttcgcag 54149206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 52 - 243
Target Start/End: Complemental strand, 628986 - 628796
Alignment:
Q  52 tcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagta 151  Q
    |||| |||||||||||||| | ||| |||||||||||||  |||||||||| | | ||||||| |||||||||| | || |||||| |||| | |||| |    
T  628986 tcttgttgcggtgttcgttgg-ttcatattgaaagatcagcttcagtcaatcacagattcaatcaatgatttggacatcaacgttgtagatccagaagca 628888  T
Q  152 tgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
     | ||||    |||| ||||| | || ||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| ||||    
T  628887 agagtattctggtgatttagattatatcatattatttgtaggcattttgccgttgtattctattaacttgggtgttgtgagtttgttcgcag 628796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 61 - 243
Target Start/End: Original strand, 16235459 - 16235641
Alignment:
Q  61 ggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgt 160  Q
    |||| ||||||| ||| ||||||||||| | ||| || |||| | ||||||||| ||||||||||||||| |||||||||||   |||| ||||||||      
T  16235459 ggtgctcgtttggttcgtattgaaagattagttttagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatcaagaagcatgggtattc 16235558  T
Q  161 cagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
      |||| ||||| || | ||||||| |||||||||||||  ||||||||||||||||||||| || ||| |||||||| ||||    
T  16235559 tggtgatttagatttcatcatattacttgtaggcattttgtcgttgtatgctattaacttggatggtgtgagtttgttcgcag 16235641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 198
Target Start/End: Original strand, 45424775 - 45424968
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||||| | ||||||||| || ||| |||| || |||||||||  ||| || |||||||||| ||||  |||||||||||| ||| |  || |||||||    
T  45424775 agtgcagtggtgtgttgtttgtcgtcctgtgtgg-gtttgatttcgcgtattgttgcggtgtttgtttagttcctattgaaaaatcgacatcggtcaatt 45424873  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattt 198  Q
    | ||||||||| ||||||||||||||| || |||||||| |||||  |||||||  || ||||||| || |||| ||||||||||||||||||||    
T  45424874 acaaattcaatcaatgatttgggcgtcaacattgcagatccggaatcatgggtacttcggtgacttcgattttatcatattatttgtaggcattt 45424968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 243
Target Start/End: Complemental strand, 50194402 - 50194208
Alignment:
Q  49 tcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaa 148  Q
    |||||| | ||||||||||||||| ||| |||||||||| ||  |||||||||| | | |||||||  ||||||||| |||  ||||||||||| |||||    
T  50194402 tcgtctgagtgcggtgttcgtttgtttcatattgaaagaccagcttcagtcaatcacagattcaatcgatgatttggacgttaacgttgcagatccggaa 50194303  T
Q  149 gtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    | ||| ||||    |||| |||||  | | |||||| |||||||||||||| ||||| |||||||||||||||| |||||| |||||||| ||||    
T  50194302 gcatgagtattctggtgatttagatatcatcatattttttgtaggcattttgccgttatatgctattaacttggatgttgtgagtttgttcgcag 50194208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 58 - 238
Target Start/End: Complemental strand, 27706284 - 27706104
Alignment:
Q  58 tgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggta 157  Q
    ||||||||||||||| ||| |||||||||||||  ||    |||| | ||||||||| |||||||| |||||| |||||||| || |  ||| |||||||    
T  27706284 tgcggtgttcgtttggttcgtattgaaagatcagcttttaacaatcacaaattcaatcaatgatttcggcgtcaacgttgcatatccacaagcatgggta 27706185  T
Q  158 tgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |    || | ||||| || | |||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||    
T  27706184 tcctggttatttagatttcatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgttagtttgtt 27706104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 29239313 - 29239457
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcag 97  Q
    |||||||| |||||||||||||||| |||||||||||   ||||||||||  |||||| ||| |||||||||||| ||| ||||| |||||||  |||||    
T  29239313 ctgagtgcggcgttgtgttgttcgtcgtcttgtgcggcgctgtttgatttcacgtcttgttgtggtgttcgtttggttcgtattggaagatcagcttcag 29239412  T
Q  98 tcaattataaattcaattaatgatttgggcgtcgacgttgcagat 142  Q
    ||||| | | ||| ||| |||||||||| ||||||||||| ||||    
T  29239413 tcaatcacagatttaatcaatgatttggacgtcgacgttgtagat 29239457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 94 - 243
Target Start/End: Complemental strand, 7448936 - 7448787
Alignment:
Q  94 tcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtagg 193  Q
    ||||||||||| ||||||||  |||||||||| |||| |||||||| || |||||| ||| |||| || ||||||||   || | ||||||||||||||     
T  7448936 tcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcatatccggaagcatgagtatttcggtgacttaagtttcatcatattatttgtaga 7448837  T
Q  194 cattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||| ||| |||||||||||||||| |||| ||| |||||||| ||||    
T  7448836 cattttgccgctgtatgctattaacttaggtgatgtgagtttgttcgcag 7448787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 94 - 243
Target Start/End: Complemental strand, 7457078 - 7456929
Alignment:
Q  94 tcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtagg 193  Q
    ||||||||||| ||||||||  |||||||||| |||| |||||||| || |||||| ||| |||| || ||||||||   || | ||||||||||||||     
T  7457078 tcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcatatccggaagcatgagtatttcggtgacttaagtttcatcatattatttgtaga 7456979  T
Q  194 cattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||| ||| |||||||||||||||| |||| ||| |||||||| ||||    
T  7456978 cattttgccgctgtatgctattaacttaggtgatgtgagtttgttcgcag 7456929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 224
Target Start/End: Original strand, 18011003 - 18011216
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaatt 110  Q
    ||||||||||||| |  |||||||||| |||||||||  | |||| |  ||||||||||||  || ||||||||||||| | || ||||||| | || ||    
T  18011003 cgttgtgttgttcatcatcttgtgcggcgtttgatttcacatcttgtcacggtgttcgtttagtttctattgaaagatcgactttagtcaataacaattt 18011102  T
Q  111 caattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatg 210  Q
    |||| ||| | ||||||||| ||||||||||| | |||| |||  ||| |||||||||||||  | | ||||||||||||||| || || | ||||||||    
T  18011103 caatcaatcacttgggcgtcaacgttgcagatccagaagcatgaatatttcagtgacttagatataatcatattatttgtaggtatcttgcggttgtatg 18011202  T
Q  211 ctattaacttgggt 224  Q
    ||| ||| ||||||    
T  18011203 ctactaatttgggt 18011216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 209
Target Start/End: Complemental strand, 26716171 - 26716014
Alignment:
Q  52 tcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagta 151  Q
    |||| ||||||||||||||||||| |||||||||||| |  |||||||||| ||||||||||| |||||||| |||||| ||||||||||| |||||  |    
T  26716171 tcttgttgcggtgttcgtttgatttctattgaaagattagcttcagtcaatcataaattcaatcaatgattttggcgtcaacgttgcagatccggaatca 26716072  T
Q  152 tgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    | ||||    | ||| ||| | |||| ||||||||||||| |||||||  ||||||||    
T  26716071 taggtactataatgatttatattttatcatattatttgtaagcattttttcgttgtat 26716014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 42460780 - 42460964
Alignment:
Q  58 tgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggta 157  Q
    ||||||||||||||| ||| |||| ||| ||||| ||||| || | | ||||||||| ||||||||||||||| ||||||||||| | |||| |||   |    
T  42460780 tgcggtgttcgtttggttcgtattcaaatatcaacttcagaca-tcacaaattcaatcaatgatttgggcgtcaacgttgcagatacagaagcatgaaca 42460878  T
Q  158 tgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |    |||| ||||| |||| |||||||||||||||||||||   ||||||||||||||||||||||  ||| |||||||| ||||    
T  42460879 ttctggtgatttagattttatcatattatttgtaggcattttgttgttgtatgctattaacttgggtactgtgagtttgttcgcag 42460964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 40 - 220
Target Start/End: Complemental strand, 26275895 - 26275715
Alignment:
Q  40 tttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgca 139  Q
    ||||||||  |||||| | ||| |||||||||  |||||| ||||||||| |  |||||||  || ||||||||| |||||||| |  ||  ||||||||    
T  26275895 tttgatttcgcgtcttgtcgcgatgttcgtttagttcctagtgaaagatcgacatcagtcatatacaaattcaatcaatgattttgttgttaacgttgca 26275796  T
Q  140 gattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaactt 220  Q
    |||||| ||  ||| |||| ||||||||||| | |||| |||||||||||||||||||||  | |||||||||||||||||    
T  26275795 gattcgaaaacatgagtatttcagtgacttatattttatcatattatttgtaggcattttgtcattgtatgctattaactt 26275715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 13 - 243
Target Start/End: Original strand, 35175386 - 35175619
Alignment:
Q  13 ttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    ||||||||||| | ||||||||| |   ||||||||||   ||||| |||||||||||||||| ||  |||||||||||||  |||||||||| | | ||    
T  35175386 ttgtgttgttcatcgtcttgtgcagcgttgtttgatttcatgtcttgttgcggtgttcgtttggtttatattgaaagatcagcttcagtcaatcacatat 35175485  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcag-tgacttagaatttaccatattatttgtaggcattttaccgttgta 208  Q
    ||||| |||||||||| | || ||||||||||| || ||  ||| |||| || | ||| ||| | || | |||||| ||||||||||||||  | |||||    
T  35175486 tcaatcaatgatttggacatcaacgttgcagatccgaaaacatgagtat-tctgatgatttatatttcatcatattgtttgtaggcattttgtcattgta 35175584  T
Q  209 tgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||||||||| ||||||| |||||||| ||||    
T  35175585 tgctattaacttgagtgttgtgagtttgttcgcag 35175619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 133 - 238
Target Start/End: Original strand, 46220768 - 46220873
Alignment:
Q  133 cgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttag 232  Q
    |||||||||| || ||| || ||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||| ||||| ||||||| ||  ||    
T  46220768 cgttgcagatccgaaagcattggtatttcagtgatttagattttatcatattatttgtaggcattttaccgttgtatgccattaatttgggtgctgcgag 46220867  T
Q  233 tttgtt 238  Q
    ||||||    
T  46220868 tttgtt 46220873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 142
Target Start/End: Complemental strand, 35865038 - 35864906
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    ||||||||||||| || |||||||| || |||||||||  |||||| | |||||||||||||  |||||||||||||||| |  ||| ||||||| ||||    
T  35865038 gcgttgtgttgttagtcgtcttgtgtggcgtttgattttgcgtcttttcgcggtgttcgtttagttcctattgaaagatcgacatcaatcaattacaaat 35864939  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagat 142  Q
    ||||| |||||||||| |||  || ||||||||    
T  35864938 tcaatcaatgatttggacgttaacattgcagat 35864906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 37040755 - 37040986
Alignment:
Q  14 tgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaa 113  Q
    ||||||| |||| ||||||||||| |||||||||  |||||| | |||| ||||||||  || ||||||||||||  |  || ||||||||||||| |||    
T  37040755 tgtgttggtcgtcgtcttgtgcggcgtttgatttcacgtcttgtcgcggcgttcgtttagtttctattgaaagattgacatcggtcaattataaatccaa 37040854  T
Q  114 ttaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgcta 213  Q
    | ||||||||||| ||  | ||||| |||   |||  ||| |||| || |||||||||| || | ||||||| ||||| |||||||  | || |||| ||    
T  37040855 tcaatgatttgggtgtgaatgttgccgatctagaaacatgagtatttcggtgacttagatttaatcatattagttgta-gcattttgtcattttatgtta 37040953  T
Q  214 ttaacttgggtgttgttagtttgtttgcagttt 246  Q
    |||||||||||| ||| |||||||| |||||||    
T  37040954 ttaacttgggtgctgtgagtttgttcgcagttt 37040986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 43016831 - 43016974
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||||||||||||||| ||||||| || |||||||||   ||||| | |||||||| ||||  |||||  ||||||||| |  | ||||||||    
T  43016831 agtgcggcgttgtgttgttcgttatcttgtgtggcgtttgattttgtgtcttgtcgcggtgtttgtttagttccttgtgaaagatcgacgttagtcaatt 43016930  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcgga 147  Q
    | ||||||||  ||||||||||||||| ||||||||||| ||||    
T  43016931 acaaattcaaccaatgatttgggcgtcaacgttgcagatccgga 43016974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 53508195 - 53508437
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcggtgtt---tgatttatc-gtcttattgcggtgttcgtttgattcctattgaaagatcaatttca 96  Q
    |||| ||| |||||||||||||||| ||||||| || ||||   ||||||  | || || |||| ||||||||||| |||||||||||||||||| | ||    
T  53508195 ctgaatgcggcgttgtgttgttcgtcgtcttgtacgatgttgtttgatttccccgttttgttgcagtgttcgtttggttcctattgaaagatcaaatcca 53508294  T
Q  97 gtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcat 196  Q
    || ||| | | ||||||| |||||||||| |||| || ||||| || |  ||| ||| ||||  || ||| ||||| |||| ||||||||||||||||||    
T  53508295 gttaatcacagattcaatcaatgatttggacgtcaactttgcacatccaaaagcatgagtattacaatgatttagattttatcatattatttgtaggcat 53508394  T
Q  197 tttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||  |||    |||||||||||||| |||||| | |||||| ||||    
T  53508395 tttgtcgt----tgctattaacttggatgttgtgattttgttcgcag 53508437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 243
Target Start/End: Original strand, 4821817 - 4822021
Alignment:
Q  38 tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttg 137  Q
    ||||||||||  |||||| |||||||||||||||| ||| |||||||||||||  || ||||||| | | |||||||  ||||||||| |  | |||||     
T  4821817 tgtttgattttgcgtcttgttgcggtgttcgtttggttcatattgaaagatcagcttgagtcaatcacatattcaatccatgatttggacaccaacgtta 4821916  T
Q  138 cagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgt 237  Q
    || || |||| | ||||||||    |||| ||| | || | |||||| |||||||||||||| | ||| ||||||||||||||||||| ||| |||||||    
T  4821917 caaatccggaggcatgggtattctggtgattta-atttcatcatattttttgtaggcattttgctgttatatgctattaacttgggtgatgtgagtttgt 4822015  T
Q  238 ttgcag 243  Q
    | ||||    
T  4822016 tcgcag 4822021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 12947391 - 12947248
Alignment:
Q  2 tgagtgcagcgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagt 98  Q
    ||||||| || ||||||||||||| |||||||||||   ||||||||||  | |||| ||| |||||||||||| ||| |||||||| ||||| ||||||    
T  12947391 tgagtgcggctttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttgttgtggtgttcgtttggttcatattgaaatatcaacttcagt 12947292  T
Q  99 caattataaattcaattaatgatttgggcgtcgacgttgcagat 142  Q
    |||| ||| |||||||  ||||||||| || | || ||||||||    
T  12947291 caatcatagattcaatcgatgatttggacgccaacattgcagat 12947248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 98 - 219
Target Start/End: Original strand, 19619784 - 19619904
Alignment:
Q  98 tcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatt 197  Q
    ||||||| || |||||| |||||||| || ||| |||||| |||| || ||| ||| | || || |||||||||| |||| |||||||||||||||||||    
T  19619784 tcaattacaagttcaatcaatgatttaggtgtcaacgttgtagatccg-aagcatgagaatttcggtgacttagattttatcatattatttgtaggcatt 19619882  T
Q  198 ttaccgttgtatgctattaact 219  Q
    || |||||||||||||||||||    
T  19619883 ttgccgttgtatgctattaact 19619904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 44959950 - 44959846
Alignment:
Q  139 agattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    ||||||||||  |||||||| || ||||||||   |||| ||||||||||||||||||||| || ||||||||||||||||||| || ||| ||||| ||    
T  44959950 agattcggaatcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgccattgtatgctattaacttggatgctgtgagtttatt 44959851  T
Q  239 tgcag 243  Q
    |||||    
T  44959850 tgcag 44959846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 45425578 - 45425762
Alignment:
Q  14 tgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaa 113  Q
    |||||||| ||| ||| | ||||| |||||||||  ||| || | |||||||| ||||  |||| ||||||||||| |  ||| ||||||| ||||||||    
T  45425578 tgtgttgtccgtcgtcctatgcggcgtttgatttcgcgtattgtcgcggtgtttgtttagttcccattgaaagatcgaaatcaatcaattacaaattcaa 45425677  T
Q  114 ttaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattt 198  Q
    | |||||||||||| || || |||||||| |||||  ||  |||| || ||||||| || |||| ||||||||||| ||||||||    
T  45425678 tcaatgatttgggcttcaacattgcagatccggaaccataagtatttcggtgacttcgattttatcatattatttgcaggcattt 45425762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 238
Target Start/End: Complemental strand, 3085301 - 3085179
Alignment:
Q  116 aatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcag-tgacttagaatttaccatattatttgtaggcattttaccgttgtatgctat 214  Q
    |||||||||  |||| |||||||||||||| ||||| |||||| || | ||| |||||||| | ||||||||||||||||||||| |||||||| |||||    
T  3085301 aatgatttgaacgtcaacgttgcagattcgaaagtaggggtat-tctgatgatttagaattcatcatattatttgtaggcattttgccgttgtaggctat 3085203  T
Q  215 taacttgggtgttgttagtttgtt 238  Q
    ||| |||||||  || ||||||||    
T  3085202 taaattgggtgcagtgagtttgtt 3085179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 29922068 - 29922251
Alignment:
Q  39 gtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgc 138  Q
    |||||||||  |||||| |||||||||   |||  ||| |||||||||||||| ||||  |||| | | ||||||| |||||||||| |||| |||||||    
T  29922068 gtttgatttcgcgtcttgttgcggtgtatatttcgttcatattgaaagatcaacttcaaccaatcacatattcaatcaatgatttggacgtcaacgttgc 29922167  T
Q  139 agattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgg 222  Q
    |||| | |||  |||  | |    |||| ||||| |||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  29922168 agatccagaaacatgattgttctggtgatttagattttatcatattgtttgtaggcattttgccgttgtatgctattaacttgg 29922251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 29971221 - 29971404
Alignment:
Q  39 gtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgc 138  Q
    |||||||||  |||||| |||||||||   |||  ||| |||||||||||||| ||||  |||| | | ||||||| |||||||||| |||| |||||||    
T  29971221 gtttgatttcgcgtcttgttgcggtgtatatttcgttcatattgaaagatcaacttcaaccaatcacatattcaatcaatgatttggacgtcaacgttgc 29971320  T
Q  139 agattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgg 222  Q
    |||| | |||  |||  | |    |||| ||||| |||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  29971321 agatccagaaacatgattgttctggtgatttagattttatcatattgtttgtaggcattttgccgttgtatgctattaacttgg 29971404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 20987711 - 20987633
Alignment:
Q  160 tcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    ||||| ||||||| |||| ||||||||||||||||||||| | |||||||||||||||||||| || ||| ||||||||    
T  20987711 tcagttacttagattttatcatattatttgtaggcattttgcagttgtatgctattaacttggatgatgtgagtttgtt 20987633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 27856194 - 27856380
Alignment:
Q  58 tgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcag-attcggaagtatgggt 156  Q
    ||||||| ||||||| ||||||||||||||| || |||||| ||| | ||||||||| |||||| ||| |||   |  || || ||||||||| ||| ||    
T  27856194 tgcggtgctcgtttggttcctattgaaagattaacttcagtaaataacaaattcaatcaatgatctggacgtattc--tgaagtattcggaagcatgagt 27856291  T
Q  157 atgtca--gtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    || |    |||| ||||| |||| ||||||||||||||||||||| |||||| ||||||||||||||| || ||| |||||||| ||||    
T  27856292 atattctggtgatttagattttatcatattatttgtaggcatttttccgttgcatgctattaacttggatgatgtgagtttgttcgcag 27856380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 43017039 - 43017095
Alignment:
Q  179 catattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagttt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||    
T  43017039 catattatttgtaggcattttgccgttgtatgctattaacttaggtgttgtgagttt 43017095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 13458985 - 13459043
Alignment:
Q  182 attatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttg 240  Q
    |||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||    
T  13458985 attatttgtaggcatttttccgttgtatgatattaacttaggtgttgtgagtttgtttg 13459043  T

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Target: chr3; HSP #71
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 26739475 - 26739235
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcggtgt---ttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcag 97  Q
    ||||||||| || |||||||||| ||||||||||||| ||   |||||||  | |||| ||| | |||  ||||| ||||||||||||||| || |||      
T  26739475 ctgagtgcaacgctgtgttgttcattgtcttgtgcggcgtcgtttgattttgcatcttgttgtgatgtctgtttggttcctattgaaagattaacttcga 26739376  T
Q  98 tcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatt 197  Q
    ||||| ||| ||||||  |||||||| | ||||  ||||||||||   |||   |||||||     | | ||||| |||| ||||||||||||| |||||    
T  26739375 tcaatcatagattcaaccaatgattttgacgtcagcgttgcagatcaagaatcgtgggtattatgataatttagattttatcatattatttgtaagcatt 26739276  T
Q  198 ttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    ||  |||||||||||||||||||| |||| || ||||||||    
T  26739275 ttggcgttgtatgctattaacttgagtgtcgtaagtttgtt 26739235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 58 - 135
Target Start/End: Complemental strand, 7887501 - 7887424
Alignment:
Q  58 tgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgt 135  Q
    ||||||||||||||  |||||||||||||||||| ||||| |||| | | |||| |||||||||||||||||| ||||    
T  7887501 tgcggtgttcgtttagttcctattgaaagatcaacttcagacaatcacatattcgattaatgatttgggcgtcaacgt 7887424  T

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Target: chr3; HSP #73
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 31271910 - 31271756
Alignment:
Q  13 ttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattca 112  Q
    ||||||||||||| |||||||||||  ||||||||  |||||| | ||||  |||||||  ||| ||| |||||||| | |||||| ||  | |||||||    
T  31271910 ttgtgttgttcgtcgtcttgtgcggcatttgatttcgcgtcttgtcgcggcattcgtttagttcatatggaaagatcgacttcagttaa--acaaattca 31271813  T
Q  113 attaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgactt 169  Q
    || || |||||||||||| ||  ||||||| |||||| |||||||  ||||||||||    
T  31271812 atcaaagatttgggcgtcaacaatgcagatccggaagcatgggtagttcagtgactt 31271756  T

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Target: chr3; HSP #74
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 36734765 - 36734687
Alignment:
Q  14 tgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||||| |||||||||||   ||||||||||  |||||||||||||||||| |||||||| || |||||||||    
T  36734765 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttattgcggtgttcatttgattcataatgaaagatc 36734687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 240
Target Start/End: Complemental strand, 52116072 - 52115897
Alignment:
Q  62 gtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtc 161  Q
    |||||||||||||||   |||||||||||| ||||  |||| | | ||||||| ||||||||  ||||| || |||||||| |  ||  ||||||||       
T  52116072 gtgttcgtttgattc---ttgaaagatcaacttcaaacaatcacatattcaatcaatgatttaagcgtcaacattgcagatccaaaatcatgggtattct 52115976  T
Q  162 agtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttg 240  Q
    | ||| ||||| | || |||||||||||||| ||||||   ||| |||| |||||||||||||||||| ||||||||||    
T  52115975 aatgatttagattgtatcatattatttgtagtcattttgttgttatatgttattaacttgggtgttgtgagtttgtttg 52115897  T

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Target: chr3; HSP #76
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 4396441 - 4396336
Alignment:
Q  12 gttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaa 108  Q
    ||||||||||| || |||||||| ||   ||||||||||  || ||| |||||||||||||||||||| ||||||||||| |  |||||||||| ||| |    
T  4396441 gttgtgttgtttgtcgtcttgtgtggcgttgtttgattttgcgccttgttgcggtgttcgtttgattcatattgaaagataagcttcagtcaatcataga 4396342  T
Q  109 ttcaat 114  Q
    ||||||    
T  4396341 ttcaat 4396336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 41818194 - 41818311
Alignment:
Q  13 ttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaa----ttat 105  Q
    ||||||||||||| |||||||||||   ||||||||||  |||||| ||| | |||||||||| |||||||||||||||||| |||| ||||    |||     
T  41818194 ttgtgttgttcgtcgtcttgtgcggtattgtttgatttcgcgtcttgttgtgatgttcgtttg-ttcctattgaaagatcaacttcaatcaatcatttac 41818292  T
Q  106 aaattcaattaatgatttg 124  Q
    ||||||||| |||||||||    
T  41818293 aaattcaatcaatgatttg 41818311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 7792141 - 7792063
Alignment:
Q  162 agtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttg 240  Q
    ||||| ||||| |||| ||||||||||||||||||||| || ||||| ||||||||||| ||||||   ||||||||||    
T  7792141 agtgatttagattttatcatattatttgtaggcattttgccattgtaagctattaacttaggtgttaagagtttgtttg 7792063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 136
Target Start/End: Complemental strand, 9211677 - 9211580
Alignment:
Q  38 tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgtt 136  Q
    ||||||||||||| |||| ||| |||||||||| |||| ||||| ||||||||| ||||||| |||| || | ||||||||||||| | |||| |||||    
T  9211677 tgtttgatttatcatcttgttgtggtgttcgttagatttctatt-aaagatcaaattcagtctattacaagtacaattaatgattttgacgtcaacgtt 9211580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 12116101 - 12116177
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    ||||||||||||||||||||||   ||||||||||  ||||||  |||||||||| |||||||| ||||||||||||    
T  12116101 tgttgttcgttgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 12116177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 224
Target Start/End: Original strand, 44805052 - 44805225
Alignment:
Q  50 cgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaag 149  Q
    |||||| |||||||||||||||| | | |||||||| ||||   ||||||||| | | || |||| ||| |||||| | || |||||||| || ||  ||    
T  44805052 cgtcttgttgcggtgttcgtttggtgcatattgaaatatcatcctcagtcaatcacatatgcaatcaataatttggac-tcaacgttgcaaatccgagag 44805150  T
Q  150 tatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggt 224  Q
     ||||||||    |||| ||||| |||| |||||| ||||||||||||||  | |||||||||||||||||||||    
T  44805151 catgggtattatggtgatttagattttatcatattgtttgtaggcattttgtcattgtatgctattaacttgggt 44805225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 46934645 - 46934721
Alignment:
Q  16 tgttgttcgttgtcttgtgcggtgtt---tgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||||||   ||||||  |||||| ||||||||||| |||||||| ||||||||||||    
T  46934645 tgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatc 46934721  T

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Target: chr3; HSP #83
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 2208869 - 2208933
Alignment:
Q  61 ggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttggg 126  Q
    ||||||||||||||| ||||||||||| | |||||||||||||||| ||||||  |||||||||||    
T  2208869 ggtgttcgtttgatttctattgaaagaccgatttcagtcaattatatattcaa-caatgatttggg 2208933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 12946904 - 12946845
Alignment:
Q  179 catattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||| |||||||||||||| || || ||||||||||||||||||||||| | ||||||    
T  12946904 catattttttgtaggcattttgcccttatatgctattaacttgggtgttgtgaatttgtt 12946845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 242
Target Start/End: Original strand, 38142676 - 38142739
Alignment:
Q  179 catattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgca 242  Q
    ||||||||||||||||||||||  ||||||| |||||||||||  || ||| ||||||||||||    
T  38142676 catattatttgtaggcattttattgttgtatactattaacttgaatgctgtgagtttgtttgca 38142739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 22803025 - 22803105
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatt 93  Q
    |||||||||| ||||| |||||   |||||||||| |||| |  ||||||||||| |||||||| ||||||||||||||||    
T  22803025 tgttgttcgtcgtcttatgcggcgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaaagatcaatt 22803105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 32246469 - 32246547
Alignment:
Q  50 cgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcg 128  Q
    |||||| ||||| |||||  ||| |||||||||||||||||| |||||| ||| | | ||||||| |||||||||||||    
T  32246469 cgtcttgttgcgctgttcacttggttcctattgaaagatcaacttcagttaatcacatattcaatcaatgatttgggcg 32246547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 35499269 - 35499193
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||   ||||||||||  ||||||  |||||||||| |||||||| ||||||||||||    
T  35499269 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagatc 35499193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 42719520 - 42719596
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||   ||||||||||  ||||||  |||||||||| |||||||| ||||||||||||    
T  42719520 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 42719596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 9173899 - 9173940
Alignment:
Q  179 catattatttgtaggcattttaccgttgtatgctattaactt 220  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  9173899 catattatttgtaggcattttgccgttgtatgttattaactt 9173940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 12116262 - 12116314
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||| | ||||| |||||||||||||||| |||||| ||||||||    
T  12116262 tttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgtt 12116314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 42455757 - 42455693
Alignment:
Q  179 catattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||| |||||| ||||||  ||||||||||||||||||| | |||||| |||||||| ||||    
T  42455757 catattagttgtagtcattttgtcgttgtatgctattaacttcgatgttgtgagtttgttcgcag 42455693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 3848990 - 3848914
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||   |||||| |||  | |||| ||||||||||| ||| |||||||||||||||||    
T  3848990 tgttgttcgtcgtcttgtgcggcgttgtttgctttcccatcttcttgcggtgttcattttattcctattgaaagatc 3848914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 20987903 - 20987729
Alignment:
Q  12 gttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattc 111  Q
    |||||||| || || |||||||| ||  ||||||||  |||||| | ||| |||| ||||  |||||||||||||||| |  || |||||||| || ||     
T  20987903 gttgtgttcttagtcgtcttgtgtggcatttgatttcgcgtcttgtcgcgatgtttgtttagttcctattgaaagatcgacatcggtcaattacaagtta 20987804  T
Q  112 aattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattat 186  Q
     || ||||||||||| ||| ||||| |||||  ||||| ||  | || ||||| ||||||| |||| ||||||||    
T  20987803 catcaatgatttgggagtcaacgttacagatctggaagcataagaatttcagtaacttagattttatcatattat 20987729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 26446938 - 26446988
Alignment:
Q  56 attgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattata 106  Q
    |||| ||||||||||| ||||||||||||||||||| | || |||||||||    
T  26446938 attgtggtgttcgtttaattcctattgaaagatcaactccaatcaattata 26446988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 36906125 - 36906205
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatt 93  Q
    |||||||||| |||||||||||   ||||||||||  ||||||  ||  |||||| |||||||| ||||||||||||||||    
T  36906125 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgtagtgttcatttgattcatattgaaagatcaatt 36906205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 36910753 - 36910643
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttatt-gcggtgttcgtttgattcctattgaaagatcaatttcagtcaat 102  Q
    ||||| ||||| |||||||||| ||||||||||| |||||||||  |||||| || |||||||  |||   |||||||||||||||  |  ||| |||||    
T  36910753 agtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgttcgcggtgtctgttcagttcctattgaaagatgtacatcaatcaat 36910654  T
Q  103 tataaattcaa 113  Q
    || ||||||||    
T  36910653 tacaaattcaa 36910643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 39917468 - 39917393
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||||||||||| ||    |||||||||| |||||||  |||||||||| |||||||| ||||||||||||    
T  39917468 tgttgttcgttgtcttgtacgacgttgtttgattt-tcgtcttcgtgcggtgttcatttgattcatattgaaagatc 39917393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 49552295 - 49552219
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||   |||||||||| |||| || ||||||||||| ||| ||||  |||||||||||    
T  49552295 tgttgttcgtcgtcttgtgcggcgttgtttgatttctcgttttcttgcggtgttcattttattcacattgaaagatc 49552219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 31794059 - 31794150
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    ||||||| || | |||||||||||| || ||||||||   ||||||||||    |||| ||||||||||| |||||||| ||||||||||||    
T  31794059 ctgagtgtagtggtgtgttgttcgtcgttttgtgcggcgttgtttgattttctatcttgttgcggtgttcatttgattcatattgaaagatc 31794150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 32607472 - 32607547
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagat 88  Q
    |||||||||| |||||||| ||   ||||||||||  ||||||  |||||||||| |||||||| |||||||||||    
T  32607472 tgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagat 32607547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 35864893 - 35864844
Alignment:
Q  189 gtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    ||||||||||| || ||||||||||||||||||| |||||| || |||||    
T  35864893 gtaggcattttgccattgtatgctattaacttggatgttgtgaggttgtt 35864844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 36906286 - 36906343
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| | ||||| |||||||||||||||| || ||| |||||||| ||||    
T  36906286 tttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgcag 36906343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 49552134 - 49552077
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| | ||||| |||||||||||||||| || ||| |||||||| ||||    
T  49552134 tttgtaggcattatgccgttatatgctattaacttggatgctgtaagtttgttcgcag 49552077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 1649390 - 1649513
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcggtgtt--tgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagt 98  Q
    |||||||  ||||||| ||||||   |||||||||||||||  ||||||  |||||| |||  |||||| |||  |||||||||||||||| | |||||     
T  1649390 ctgagtgtggcgttgtattgttctccgtcttgtgcggtgttgttgatttcgcgtcttgttgatgtgttcttttagttcctattgaaagatcgacttcaga 1649489  T
Q  99 caattataaattcaattaatgatt 122  Q
    |||||| | ||| ||| |||||||    
T  1649490 caattacagatttaatcaatgatt 1649513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 242
Target Start/End: Original strand, 3656080 - 3656167
Alignment:
Q  154 ggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgca 242  Q
    ||||| || ||||||||||  ||| ||||||||||  ||| ||||||  |||||||| | | |||||||||||||| ||||||||||||    
T  3656080 ggtatttcggtgacttagatcttatcatattatttacaggtattttaatgttgtatgtt-taaacttgggtgttgtgagtttgtttgca 3656167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 22803194 - 22803246
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||| | ||||| |||||||||||||||| || ||| ||||||||    
T  22803194 tttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgtt 22803246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 25162600 - 25162652
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||| |  |||| |||||||||||||||| |||||| ||||||||    
T  25162600 tttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgtt 25162652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 31271745 - 31271705
Alignment:
Q  203 gttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||||||| |||||| |||||||| |||||||||||||    
T  31271745 gttgtatgctaataacttaggtgttgtgagtttgtttgcag 31271705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 52496937 - 52496989
Alignment:
Q  38 tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatca 90  Q
    ||||||||||  ||| || ||| |||||||||||||||| |||||||||||||    
T  52496937 tgtttgatttcacgtattgttgaggtgttcgtttgattcttattgaaagatca 52496989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 1e-53; HSPs: 111)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 4 - 238
Target Start/End: Original strand, 5983816 - 5984050
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||| |||||||||| ||||||||||| |||||||||   ||||| | |||||||| ||||  |||||||||||||||| |  ||||||||||    
T  5983816 agtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgtgtcttgtcgcggtgtttgtttagttcctattgaaagatctacatcagtcaatt 5983915  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  ||||||||||||||| ||| ||||||| |||||| |||||||| || ||||||||   |||| |||||||||||||||||||||  ||    
T  5983916 acaaattcaaccaatgatttgggcgtcaacgctgcagatccggaagcatgggtatttcggtgacttatgttttatcatattatttgtaggcattttgtcg 5984015  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||||||||||||| ||| ||||||||    
T  5984016 ttgtatgctattaacttgggtgatgtgagtttgtt 5984050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 4 - 238
Target Start/End: Original strand, 14872620 - 14872853
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| || ||||||||||||| ||||||||||| |||||||||  |||||| | ||||||||| |||  ||| |||||||||||| |  ||||||||||    
T  14872620 agtgcggcattgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgcggtgttcatttagttc-tattgaaagatcgacatcagtcaatt 14872718  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  ||||||||||||||| ||||||||||| |||||| |||||||| |  |||||||||  |||| ||||||||||||||||||||| |||    
T  14872719 acaaattcaaccaatgatttgggcgtcaacgttgcagatccggaagcatgggtattttggtgacttaggttttatcatattatttgtaggcattttgccg 14872818  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    ||||||||||||||||||| || ||| ||||||||    
T  14872819 ttgtatgctattaacttggatgctgtgagtttgtt 14872853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 10 - 238
Target Start/End: Complemental strand, 34878384 - 34878156
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    |||||||||||||||| |||||||||||||||||||||  ||| || | |||||||| |||   ||||||||||||||||    ||||||||||| ||||    
T  34878384 gcgttgtgttgttcgtcgtcttgtgcggtgtttgatttcgcgttttgtcgcggtgtttgttaatttcctattgaaagatcggcatcagtcaattacaaat 34878285  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatggg-tatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgta 208  Q
    ||||  ||||||||||||||| |||||| |||| |||||| ||| | ||| ||||||||||||  |||| ||||||||||||||||||||| ||||| ||    
T  34878284 tcaaccaatgatttgggcgtcaacgttgaagatccggaagcatgtgatat-tcagtgacttaggttttatcatattatttgtaggcattttgccgtttta 34878186  T
Q  209 tgctattaacttgggtgttgttagtttgtt 238  Q
    ||||||||||||||||||||| ||||||||    
T  34878185 tgctattaacttgggtgttgtgagtttgtt 34878156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 4 - 249
Target Start/End: Complemental strand, 35484503 - 35484258
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| ||||||||||   |||| |||  |||||| | |||||||| |||  ||||||||||||||||| |  ||| ||||||    
T  35484503 agtgcggcgttgtgttgttcgtcgtcttgtgcgtcatttgctttcgcgtcttgtcgcggtgtttgttcaattcctattgaaagatctacatcaatcaatt 35484404  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| ||||||||||| || ||| |||||||| || |||| || |  |||| ||||||||||||| ||||||| |||    
T  35484403 acaaattcaagcaatgatttggacgtcaacgttgcagatccgaaagcatgggtatttcggtgatttcggttttatcatattatttgtaagcattttgccg 35484304  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcagtttcgc 249  Q
    |||||||||||||||||||||||||| |||||||| |||| |||||    
T  35484303 ttgtatgctattaacttgggtgttgtgagtttgttcgcagattcgc 35484258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 10 - 243
Target Start/End: Complemental strand, 27580234 - 27580001
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    |||||||||||||||| || | ||| ||  ||||||||  |||||| | ||||||||| |||  |||||||||||||||| | |||||| ||||| ||||    
T  27580234 gcgttgtgttgttcgtcgtatcgtgtggcatttgattttgcgtcttgtcgcggtgttcatttagttcctattgaaagatcgacttcagtaaattacaaat 27580135  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||| ||||||||||||||| || ||||||||||| ||| ||| |||| || |||||||||| |||| |||||||||  || ||||||| || || |||    
T  27580134 tcaataaatgatttgggcgtcaacattgcagattcgaaagcatgagtatttcggtgacttagattttatcatattattcataagcattttgccattttat 27580035  T
Q  210 gctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||||||| |||||||| ||||    
T  27580034 gctattaacttgggtgttgtgagtttgttcgcag 27580001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 7836908 - 7836669
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| ||||||||||  |||||||||  |||||| | |||| ||||||||  ||||||| |||||||| |  ||||||||||    
T  7836908 agtgcggcgttgtgttgttcgtcgtcttgtgcgacgtttgatttcgcgtcttgtcgcggcgttcgtttatttcctatcgaaagatcgacatcagtcaatt 7836809  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  ||||||||||||||| |||||| | ||  ||| | ||| | || || |||||||||  |||| ||||||||||||||||||||| |||    
T  7836808 acaaattcaaccaatgatttgggcgtcaacgttgaatatctggaggcatgtgaatttcggtgacttaggttttatcatattatttgtaggcattttgccg 7836709  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    || ||||||||||||||||||| ||| |||||||| ||||    
T  7836708 ttttatgctattaacttgggtgctgtgagtttgttcgcag 7836669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 247
Target Start/End: Complemental strand, 10776573 - 10776330
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| ||||| ||||| ||||||||   |||||| | |||||||||||||  ||||| |||||||||| |  ||||||||||    
T  10776573 agtgcggcgttgtgttgttcgtcgtcttatgcggcgtttgattgtgcgtcttgtcgcggtgttcgtttacttccttttgaaagatcgacatcagtcaatt 10776474  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | |||| |||| |||||||||| |||| || |||||||| | |||| ||| |||| || |||||||||  |||| ||| ||||||||||||||||| | |    
T  10776473 acaaatccaatcaatgatttggacgtcaacattgcagatccagaagcatgagtatttcggtgacttaggttttatcattttatttgtaggcattttgctg 10776374  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcagtttc 247  Q
    |||||| ||||||||||||||| ||| |||||||| ||| ||||    
T  10776373 ttgtattctattaacttgggtgctgtgagtttgttcgcaatttc 10776330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 30 - 238
Target Start/End: Original strand, 44915645 - 44915853
Alignment:
Q  30 ttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgt 129  Q
    ||||||||  ||||||||  ||| || | |||||||||||||  ||| ||||||||||||||  ||||||||||| ||||||||| ||||||||||||||    
T  44915645 ttgtgcggcatttgattttgcgttttgtcgcggtgttcgtttagttcatattgaaagatcaacatcagtcaattacaaattcaatcaatgatttgggcgt 44915744  T
Q  130 cgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgt 229  Q
    | | ||||||||| |||||| ||| |||| || ||  |||||| |||| ||||||||||||||||||||| ||||||||||||||  ||||||||| |||    
T  44915745 caatgttgcagatccggaagcatgagtatttcggtttcttagattttatcatattatttgtaggcattttgccgttgtatgctatcgacttgggtgatgt 44915844  T
Q  230 tagtttgtt 238  Q
     ||||||||    
T  44915845 gagtttgtt 44915853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 58 - 238
Target Start/End: Original strand, 48750219 - 48750399
Alignment:
Q  58 tgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggta 157  Q
    ||||||||||||||||||| |||||||||||||  ||||| |||| | ||||| ||| ||||||||||||||| ||||||||||| |  ||| |||||||    
T  48750219 tgcggtgttcgtttgattcgtattgaaagatcagcttcagacaatcacaaatttaatcaatgatttgggcgtcaacgttgcagatccataagcatgggta 48750318  T
Q  158 tgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |    |||| ||||| || | ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  48750319 ttctggtgatttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgtt 48750399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 21947730 - 21947491
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||||||| |||||||||||| |||| |  ||| |||||||||  |||||| | |||||||| ||||  ||| |||||||||||| |  ||||||||||    
T  21947730 agtgcagcgctgtgttgttcgtcgtctcggacggcgtttgatttcgcgtcttgtcgcggtgtttgtttagttcttattgaaagatctacatcagtcaatt 21947631  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| ||||||||||| |||||| |||  ||| || ||||||||   |||| ||||||||||||||||||||| |||    
T  21947630 acaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgaatatttcggtgacttaagttttatcatattatttgtaggcattttgccg 21947531  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||  |||||||||||||| ||| |||||||| ||||    
T  21947530 ttgtattttattaacttgggtgatgtgagtttgttcgcag 21947491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 4 - 238
Target Start/End: Original strand, 32394978 - 32395212
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||||||||| || | |||||||||   |||||||||  ||| |||| |||||||| |||   |||||||||||||||| |  ||| ||||||    
T  32394978 agtgcggcgttgtgttgctcatcgtcttgtgcaacgtttgatttcccgttttatcgcggtgtttgttcagttcctattgaaagatctacatcattcaatt 32395077  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| |||||||||||||| ||| |||||||| || ||||||||   |||| |||||||||| |||||||||| |||    
T  32395078 acaaattcaaccaatgatttggacgtcaacgttgcagattcgaaagcatgggtatttcggtgacttaagttttatcatattatttataggcattttgccg 32395177  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtt 238  Q
     ||||||||||||||||||||| ||| ||||||||    
T  32395178 ctgtatgctattaacttgggtgctgtaagtttgtt 32395212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 4 - 238
Target Start/End: Original strand, 45415538 - 45415772
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||| |||||||||| |||||||||   |||||||||  |||||| | |||||||| |||   |||||||||||||||| |  ||| ||||||    
T  45415538 agtgcggcgttttgttgttcgtcgtcttgtgcatcgtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatcaatt 45415637  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||| ||||  |||||||||| |||| ||||||||||| |||||| || ||||| || |||||||||  |||| ||||||||||||||||||||| |||    
T  45415638 acaaactcaagcaatgatttggacgtcaacgttgcagatccggaagcataggtatttcggtgacttaggttttatcatattatttgtaggcattttgccg 45415737  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    ||||||  |||||| ||||||||||| ||||||||    
T  45415738 ttgtataatattaatttgggtgttgtgagtttgtt 45415772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 3228259 - 3228492
Alignment:
Q  14 tgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaa 113  Q
    |||||||||||| |||||||||||  ||||||||  | |||| | |||||||| ||||  |||||||||||||||| || ||||||||||| |||| |||    
T  3228259 tgtgttgttcgtcgtcttgtgcggcatttgatttcgcatcttgtcgcggtgtttgtttagttcctattgaaagatcgatatcagtcaattacaaatacaa 3228358  T
Q  114 ttaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgcta 213  Q
    | ||||||||||||||| ||||||||||| || ||  |||| ||| ||  ||| ||||  |||| ||||||||||||||||||||| ||||| |||| ||    
T  3228359 tcaatgatttgggcgtcaacgttgcagatccgaaatcatggatatttcgatgatttaggttttatcatattatttgtaggcattttgccgttatatgtta 3228458  T
Q  214 ttaacttgggtgttgttagtttgtttgcagtttc 247  Q
    |||||||||||| |||  ||||||| || |||||    
T  3228459 ttaacttgggtgatgtgtgtttgttcgcggtttc 3228492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 238
Target Start/End: Complemental strand, 23291748 - 23291520
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    |||||||||||||| || |||||||||  |||||||||  | |||| | |||||||||||||  ||||||||||||||||    ||||||||||| ||||    
T  23291748 gcgttgtgttgttcattatcttgtgcgacgtttgatttcgcttcttgtcgcggtgttcgtttatttcctattgaaagatcggcatcagtcaattacaaat 23291649  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||  |||||||||||| || |||||| |||| |||||| ||| | || || |||||||||  |||| ||||||||||| ||| ||||| ||||| |||    
T  23291648 tcaaccaatgatttgggcatcaacgttgaagatccggaagcatgtgaatttcggtgacttaggttttatcatattatttggaggtattttgccgttttat 23291549  T
Q  210 gctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||||||| ||| ||||||||    
T  23291548 gctattaacttgggtgctgtgagtttgtt 23291520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 7337775 - 7337536
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| |||||||||   |||||||||  |||||| | |||||||| |||   ||| |||||||||||| |  ||| ||||||    
T  7337775 agtgcggcgttgtgttgttcgtcgtcttgtgcaacgtttgatttcgcgtcttgtcgcggtgtttgttcagttcatattgaaagatctacatcaatcaatt 7337676  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||  |||| ||||||||||| |||||| |||||||| || |||| || |  |||| ||||||||||||||||||||| | |    
T  7337675 acaaattcaagcaatgatttgcacgtcaacgttgcagatccggaagcatgggtatttcggtgattttggttttatcatattatttgtaggcattttgctg 7337576  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||| ||||||||||||||| |||||| |||||||| ||||    
T  7337575 ttgcatgctattaacttggctgttgtgagtttgttcgcag 7337536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 47132877 - 47133122
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcag 97  Q
    |||||||  |||||||||||||||| || ||||||||   ||||| ||||  |||||| |||||||||||||||| ||| |||||||||||||  |||||    
T  47132877 ctgagtggggcgttgtgttgttcgtcgttttgtgcggcgttgtttaatttcgcgtcttgttgcggtgttcgtttgcttcatattgaaagatcagcttcag 47132976  T
Q  98 tcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatt 197  Q
    ||||| | | |||||||  ||||||||| |||| || |||||||| |||||| ||| ||||    |||| ||||| || | |||||| ||||||||||||    
T  47132977 tcaatcacagattcaatcgatgatttggacgtcaacattgcagatccggaagcatgagtattctggtgatttagatttcatcatattttttgtaggcatt 47133076  T
Q  198 ttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    || ||||| |||||||||||||||| |||||| |||||||| ||||    
T  47133077 ttgccgttatatgctattaacttggatgttgtgagtttgttcgcag 47133122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 58 - 243
Target Start/End: Complemental strand, 36775768 - 36775583
Alignment:
Q  58 tgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggta 157  Q
    |||||| |||||||| ||| ||||||||||||   ||||| |||| | ||||||||| ||||||||||||||| ||||||||||| | |||  |||||||    
T  36775768 tgcggtattcgtttggttcgtattgaaagatcggcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaaacatgggta 36775669  T
Q  158 tgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |  | |||| ||||| || | ||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||| ||||    
T  36775668 tcccggtgatttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttggatgttgtgagtttgttcgcag 36775583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 61 - 242
Target Start/End: Complemental strand, 37720204 - 37720023
Alignment:
Q  61 ggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgt 160  Q
    |||||||||||| ||| |||||||||||||| ||||| |||| | ||||||| ||||||||||||||||| ||||||||||| |  ||| ||||||||      
T  37720204 ggtgttcgtttggttcgtattgaaagatcaacttcagacaatcacaaattcatttaatgatttgggcgtcaacgttgcagatccaaaagcatgggtattc 37720105  T
Q  161 cagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgca 242  Q
      || | ||||| |||| ||||||||||||||||||||| | || | |||||||||||||||||||||| ||||||||||||    
T  37720104 tggttatttagattttatcatattatttgtaggcatttttctgtggaatgctattaacttgggtgttgtgagtttgtttgca 37720023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 229
Target Start/End: Original strand, 45789545 - 45789746
Alignment:
Q  28 tcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggc 127  Q
    |||||||| | | |||||||  ||| || ||||| |||| ||||| |||||||||||| ||||| || | ||||||| | ||||||| ||||||||||||    
T  45789545 tcttgtgcagcgcttgattttacgtgttgttgcgatgtttgtttggttcctattgaaatatcaactttaatcaattacagattcaatcaatgatttgggc 45789644  T
Q  128 gtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgtt 227  Q
    |||||||||| |||| |||||| ||| | || ||  ||||||||||||||  |||||||||||||| |||||  | ||||||||||||||||||||||||    
T  45789645 gtcgacgttgtagatccggaagcatgtgcatttctttgacttagaatttattatattatttgtaggaattttgtcattgtatgctattaacttgggtgtt 45789744  T
Q  228 gt 229  Q
    ||    
T  45789745 gt 45789746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 13 - 243
Target Start/End: Original strand, 49626900 - 49627132
Alignment:
Q  13 ttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    ||||||||||||| |||||||||||   ||||||||||  | |||| |||||||||||||| | ||| |||||||||||||  |||||||||| | ||||    
T  49626900 ttgtgttgttcgtcgtcttgtgcggcgttgtttgatttgacatcttgttgcggtgttcgttgg-ttcatattgaaagatcagcttcagtcaatcacaaat 49626998  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcag-tgacttagaatttaccatattatttgtaggcattttaccgttgta 208  Q
    ||||| |||||||||| |||| ||||||||||| | |||| | | |||| || | ||| ||||| | || ||| |||||||||| |||||| ||||||||    
T  49626999 tcaatcaatgatttggacgtcaacgttgcagatgcagaagcaagagtat-tctgatgatttagattatatcatcttatttgtagacattttgccgttgta 49627097  T
Q  209 tgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||||| ||||||||||| |||||||| ||||    
T  49627098 tgctattaatttgggtgttgtgagtttgttcgcag 49627132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 13 - 243
Target Start/End: Original strand, 44543259 - 44543491
Alignment:
Q  13 ttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    ||||||||||||| || || |||||   ||||||||||  | ||||||||||||||||||| | ||| |||||||||||||  || ||||||| | | ||    
T  44543259 ttgtgttgttcgtcgtattatgcggcgttgtttgatttggcatcttattgcggtgttcgttgg-ttcatattgaaagatcagctttagtcaatcacagat 44543357  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||| |||||||||| |||| ||||||||||| | |||| | | ||||   ||||| ||||| | || ||||||||||||||||||||| ||||| |||    
T  44543358 tcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctagtgatttagattatatcatattatttgtaggcattttgccgttttat 44543457  T
Q  210 gctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||| ||| |||||||| ||||    
T  44543458 gctattaacttgggtgctgtgagtttgttcgcag 44543491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 10 - 243
Target Start/End: Complemental strand, 13144918 - 13144685
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    ||||||||||||  ||||||||||||    ||||||||  |||||| | |  |||||| |||||||| |||||||||| | | || | ||||||| ||||    
T  13144918 gcgttgtgttgtctgttgtcttgtgcaacatttgatttcgcgtcttgtcgtagtgttcatttgattcatattgaaagaccgactttaatcaattacaaat 13144819  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||| |||||||||| |||| |  ||||||||  | ||| ||| |||| ||||||||||||| |||| |||| |||||||||||||||| || || |||    
T  13144818 tcaatcaatgatttggacgtcaattttgcagatctgaaagcatgagtatttcagtgacttagattttatcataatatttgtaggcattttgccattttat 13144719  T
Q  210 gctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||||||||| |||||| |||||||| ||||    
T  13144718 gctattaacttggatgttgtgagtttgttcgcag 13144685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 94 - 243
Target Start/End: Complemental strand, 15431688 - 15431539
Alignment:
Q  94 tcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtagg 193  Q
    |||| |||||| ||||||||| ||||||||||||||| |||||||||||  || || || | ||| |||||||| |||| |||| ||||||||||||||     
T  15431688 tcagccaattacaaattcaatcaatgatttgggcgtcaacgttgcagatctggcagcattgatatttcagtgacatagattttatcatattatttgtaga 15431589  T
Q  194 cattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||| |||||||||||||| |||||| |||||| |||||||| ||||    
T  15431588 cattttatcgttgtatgctattcacttggatgttgtgagtttgttcgcag 15431539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 238
Target Start/End: Original strand, 31317728 - 31317950
Alignment:
Q  2 tgagtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaa 101  Q
    ||||||| | |||||||| ||||| ||||||||   ||||||||||  |||||| || ||||  |||||||||||||||||||||||||| ||           
T  31317728 tgagtgcggtgttgtgttattcgtcgtcttgtgaaatgtttgatttcacgtcttgtttcggttctcgtttgattcctattgaaagatcaactt------- 31317820  T
Q  102 ttataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttac 201  Q
           |||||| ||||||||||||||| ||||| ||||  |||||| |||| ||| || |||| |||||||||| ||||||||||||||||||||||     
T  31317821 -------ttcaatcaatgatttgggcgtcaacgttacagacccggaagcatggatatttcggtgatttagaatttatcatattatttgtaggcattttat 31317913  T
Q  202 cgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    ||||| || ||||||||||||||| ||| ||||||||    
T  31317914 cgttgcatcctattaacttgggtgatgtgagtttgtt 31317950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 243
Target Start/End: Original strand, 16262851 - 16263080
Alignment:
Q  17 gttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaa 113  Q
    |||||| ||||| ||||||||   ||||||||||  |||||| ||| |||||||||||||||| |||||||| ||||| | |||||||| | | ||||||    
T  16262851 gttgttggttgttttgtgcggcgttgtttgatttcgcgtcttgttgtggtgttcgtttgattcatattgaaaaatcaactgcagtcaatcacatattcaa 16262950  T
Q  114 ttaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcag-tgacttagaatttaccatattatttgtaggcattttaccgttgtatgct 212  Q
    | ||||||||| || || ||||||||||| |||||| ||| |||| || | ||| ||||| |||| ||| ||||| ||| ||||||| ||||| ||||||    
T  16262951 tcaatgatttgtgcatcaacgttgcagatccggaagcatgagtat-tctgatgatttagattttatcatgttattcgtatgcattttgccgttttatgct 16263049  T
Q  213 attaacttgggtgttgttagtttgtttgcag 243  Q
    |||||| || ||||||| |||||||| ||||    
T  16263050 attaacatgagtgttgtgagtttgttagcag 16263080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 222
Target Start/End: Original strand, 18939336 - 18939518
Alignment:
Q  40 tttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgca 139  Q
    ||||||||  |||| | ||||||||||| |||| ||  |||||||||||||| |||||||||||| | ||| ||| |||||||||| |||||||||||||    
T  18939336 tttgatttcacgtcctgttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttggacgtcgacgttgca 18939434  T
Q  140 gattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggca-ttttaccgttgtatgctattaacttgg 222  Q
    |||  ||||| ||| |||| |  ||||||||||||||| || |||||||| ||||| ||||  |||||||||||||||||||||    
T  18939435 gatctggaagcatgtgtattttggtgacttagaatttatcaaattatttgcaggcatttttgtcgttgtatgctattaacttgg 18939518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 13 - 238
Target Start/End: Original strand, 24582937 - 24583164
Alignment:
Q  13 ttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    ||||||||||| | | |||||||||   ||||||||||  | |||| |||||||||||||| | ||| |||||||||||||  |||||||||| | | ||    
T  24582937 ttgtgttgttcatcgccttgtgcggcgttgtttgatttggcatcttgttgcggtgttcgttgg-ttcatattgaaagatcagcttcagtcaatcacagat 24583035  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||| |||||||||| |||| ||||||||||| | |||| | |  |||    |||| ||||| | || ||||||||||||||||||||| |||||||||    
T  24583036 tcaatcaatgatttggacgtcaacgttgcagatccagaagcaagaatattctggtgatttagattatatcatattatttgtaggcattttgccgttgtat 24583135  T
Q  210 gctattaacttgggtgttgttagtttgtt 238  Q
    | |||||||||||||| ||| ||||||||    
T  24583136 gatattaacttgggtgatgtgagtttgtt 24583164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 30 - 243
Target Start/End: Original strand, 31918994 - 31919208
Alignment:
Q  30 ttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgt 129  Q
    |||||||| |||||||||  |||||| | || ||||||||||  ||||| |||||||||| |  ||||||||||| || |||||| ||||||||| || |    
T  31918994 ttgtgcggcgtttgatttcgcgtcttgtcgcagtgttcgtttagttcctgttgaaagatcgacatcagtcaattacaagttcaatcaatgatttgagcat 31919093  T
Q  130 cgacgttgcagattcggaagtatgggtatgtcagtgactta-gaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttg 228  Q
    | ||||||||||| | |||| |||   || ||||||||||| |  |||| |||||||||||||| ||||||  ||||||||||||||||||||| |||||    
T  31919094 caacgttgcagatccagaagcatgaaaatttcagtgacttagggttttatcatattatttgtagacattttgtcgttgtatgctattaacttggatgttg 31919193  T
Q  229 ttagtttgtttgcag 243  Q
      |||||||| ||||    
T  31919194 cgagtttgttcgcag 31919208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 110 - 243
Target Start/End: Original strand, 31984247 - 31984380
Alignment:
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||| ||||||||||||||| |||||||| || |||||| |||||||| || |||||||||  |||| |||||||||| || |||||||  ||||||||    
T  31984247 tcaatcaatgatttgggcgtcaacgttgcaaatccggaagcatgggtatttcggtgacttaggttttatcatattatttttaagcattttgtcgttgtat 31984346  T
Q  210 gctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||||||| | |||||| ||||    
T  31984347 gctattaacttgggtgttgtgactttgttcgcag 31984380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 1742261 - 1742454
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| ||||||||||  |||||||||  |||||| | | |||||||||||  ||||||||||||||||    ||| ||||||    
T  1742261 agtgcggcgttgtgttgttcgtcgtcttgtgcgacgtttgatttcgcgtcttgtcgtggtgttcgtttatttcctattgaaagatcggcatcaatcaatt 1742360  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatttt 199  Q
    | ||||||||  ||||||||||||||| |||||| |||| || ||| ||| | || || |||||  ||  |||| |||||||||||||||||||||    
T  1742361 acaaattcaaccaatgatttgggcgtcaacgttgaagatccgaaagcatgtgaatttcggtgac--aggttttatcatattatttgtaggcatttt 1742454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 243
Target Start/End: Complemental strand, 34413200 - 34412965
Alignment:
Q  13 ttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttat----tgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattat 105  Q
    ||||||||||||| |||||||||||   ||||||||||  | |||| |    ||||||||||||||||||  |||||||||||||  | ||| |||| |     
T  34413200 ttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgttcgtttgatttgtattgaaagatcagctccagacaatcac 34413101  T
Q  106 aaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgtt 205  Q
    ||||||||| ||| ||  || |||| |||||| |||| | |||| ||||||||    |||| ||||| || | ||||||||||||||||||||| | |||    
T  34413100 aaattcaatcaataat--ggacgtcaacgttgtagatccagaagcatgggtattctggtgatttagatttcatcatattatttgtaggcattttgcggtt 34413003  T
Q  206 gtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||| |||||||||||||||||| |||||||| ||||    
T  34413002 gtatgttattaacttgggtgttgtgagtttgttcgcag 34412965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 77 - 243
Target Start/End: Complemental strand, 29738703 - 29738537
Alignment:
Q  77 ctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaattt 176  Q
    |||||| |||||| |  ||||||||||| ||||||||  ||||| ||||||||| | |||||| || |||||| ||| |||| ||||||||||||   ||    
T  29738703 ctattggaagatctacatcagtcaattacaaattcaaccaatgacttgggcgtcaatgttgcaaatccggaagcatgtgtatttcagtgacttaggtgtt 29738604  T
Q  177 accatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    | |||||||||| | |||||||  ||||||||||||||||||||||||| ||| |||| ||| ||||    
T  29738603 atcatattatttattggcatttggccgttgtatgctattaacttgggtgctgtgagttcgttcgcag 29738537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 8212016 - 8211828
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    |||||||||||||| | ||||||||||| ||||||||   |||||| | ||| ||||| |||  || ||||||||||||| |  |||||||| || ||||    
T  8212016 gcgttgtgttgttcatcgtcttgtgcggcgtttgattccacgtcttgtcgcgatgttcatttagttactattgaaagatctacatcagtcaaatacaaat 8211917  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatttt 199  Q
    ||||  |||||| ||| |||| | ||||||||| |||||| |||||||| ||| ||||||||  |||| ||||||||||||||| |||||    
T  8211916 tcaaccaatgatctgg-cgtcaatgttgcagatccggaagcatgggtatttcaatgacttaggttttatcatattatttgtaggtatttt 8211828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 78 - 235
Target Start/End: Original strand, 39888236 - 39888393
Alignment:
Q  78 tattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaattta 177  Q
    |||||||||||| | |||||||||||| || |||||| ||||||||||||||| |||||| |||| ||   | |  ||||| || |||||||||| ||||    
T  39888236 tattgaaagatcgacttcagtcaattacaacttcaatcaatgatttgggcgtccacgttgtagatccgagcgcacaggtatttcggtgacttagatttta 39888335  T
Q  178 ccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagttt 235  Q
     |||||| ||| || |||||||| ||||||||||||||||||| | |||||| |||||    
T  39888336 tcatattctttatatgcattttatcgttgtatgctattaacttagatgttgtgagttt 39888393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 78 - 243
Target Start/End: Complemental strand, 49504633 - 49504468
Alignment:
Q  78 tattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaattta 177  Q
    |||||||||||| |  ||| ||||||| ||| ||||  ||||||||||  ||| ||||||||||| |||||| ||| || | || |||| || |  ||||    
T  49504633 tattgaaagatctacatcaatcaattacaaactcaaacaatgatttggatgtcaacgttgcagatccggaagcatgagtgtttcggtgatttgggtttta 49504534  T
Q  178 ccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
     |||| ||||| |||||||||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  49504533 acataatatttttaggcattttaccgttgtatgctattaacttgggtgctgtgagtttgttcgcag 49504468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 16989454 - 16989590
Alignment:
Q  107 aattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttg 206  Q
    |||||||  ||| ||||| ||||| | |||| |||| |||||  ||| | || ||||||||||||  |||| ||||||||||||||||||||| |||||     
T  16989454 aattcaaccaataatttgagcgtcaaggttgaagatccggaatcatgtgaatttcagtgacttaggttttatcatattatttgtaggcattttgccgttt 16989553  T
Q  207 tatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  16989554 tatgctattaacttgggtgctgtgagtttgtttgcag 16989590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 120 - 238
Target Start/End: Original strand, 4413210 - 4413328
Alignment:
Q  120 atttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaact 219  Q
    ||||||||||| ||||||||||| |||||| |||  ||| || |||||||||  |||| ||||||||||||||||||||| | ||||||||||||||| |    
T  4413210 atttgggcgtcaacgttgcagatccggaagcatgaatatttcggtgacttaggttttatcatattatttgtaggcattttgctgttgtatgctattaaat 4413309  T
Q  220 tgggtgttgttagtttgtt 238  Q
    || ||| ||| | ||||||    
T  4413310 tgagtgctgtgaatttgtt 4413328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 238
Target Start/End: Original strand, 12635148 - 12635384
Alignment:
Q  5 gtgcagcgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaa 101  Q
    |||| |||||||||||||||| |||||||||||   ||||||||||  ||| || | | ||||||| |||| ||| |||||||||||||| || ||| ||    
T  12635148 gtgcggcgttgtgttgttcgtcgtcttgtgcggcgttgtttgattttacgttttgtagtggtgttcatttggttcatattgaaagatcaactttagtaaa 12635247  T
Q  102 ttataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttac 201  Q
    | | ||||||||| |||||||||  ||||  | || || ||   |||| ||||||||    | || ||| | |||| |||||| |||  |||||||||      
T  12635248 tcacaaattcaatcaatgatttgcacgtcagcctttcatatcacgaagcatgggtattctggcgatttatattttatcatatttttttaaggcattttgt 12635347  T
Q  202 cgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    ||||||||||||||||||||| |||||||||||||||    
T  12635348 cgttgtatgctattaacttggatgttgttagtttgtt 12635384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 16161818 - 16162047
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttat----tgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||||||||||||| |||||||||||   ||||||||||  | |||| |    ||||||||||||||| ||| |||||||||||||  || || ||||     
T  16161818 cgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcacatcttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttaagacaatc 16161917  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcag-tgacttagaatttaccatattatttgtaggcattttacc 202  Q
    | ||||||| | ||||||||||||||| |||||          ||| |||||||| || | ||| ||||| |||| ||||||||||||||||||||| ||    
T  16161918 acaaattcattcaatgatttgggcgtcaacgtt----------aagcatgggtat-tctgctgatttagattttatcatattatttgtaggcattttgcc 16162006  T
Q  203 gttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    || | ||||||||||||| |||||||| |||||||| ||||    
T  16162007 gtggaatgctattaacttaggtgttgtgagtttgttcgcag 16162047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 238
Target Start/End: Original strand, 19060896 - 19061123
Alignment:
Q  13 ttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    ||||||||||||| |||||||| ||   ||||||||||  | |||| |||| ||||||||| | ||| ||||||||||| |  |||||||||| | |  |    
T  19060896 ttgtgttgttcgtcgtcttgtgtggcgttgtttgatttgacatcttgttgcagtgttcgttgg-ttcatattgaaagattagcttcagtcaatcacaggt 19060994  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||| ||| |||||| | || | |||| |||| | |||| | | ||||    |||| ||||| | || ||||||||||||||||||||| |||||||||    
T  19060995 tcaatcaataatttggacatcaatgttgtagatccagaaggaagagtattctggtgatttagattatatcatattatttgtaggcattttgccgttgtat 19061094  T
Q  210 gctattaacttgggtgttgttagtttgtt 238  Q
    ||||||||||||| |||||| ||||||||    
T  19061095 gctattaacttggatgttgtgagtttgtt 19061123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 208
Target Start/End: Complemental strand, 51916761 - 51916575
Alignment:
Q  16 tgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaatt 115  Q
    ||||||| || |||||||||||  ||||||||  |||||| | |||||  ||||||  ||||||||||||||  ||  ||||||||||| |||||||||     
T  51916761 tgttgttagtcgtcttgtgcggcatttgatttcgcgtcttgtcgcggt--tcgtttagttcctattgaaaga--aacgtcagtcaattacaaattcaatc 51916666  T
Q  116 aatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgta 208  Q
    ||||||||| ||||| ||||||||||| |||||| ||| |||| || |||||||||| |||| |||| |||||| | |||||||  |||||||    
T  51916665 aatgatttgagcgtcaacgttgcagatacggaagcatgagtatttc-gtgacttagattttatcata-tatttgcatgcattttgtcgttgta 51916575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 227
Target Start/End: Complemental strand, 6217925 - 6217712
Alignment:
Q  21 ttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaa 117  Q
    ||||||||||||||||    ||||||||||  |||||| ||  | |||||||||| |   |||||||||||||| |||||||||| | ||||||||| ||    
T  6217925 ttcgttgtcttgtgcgacgttgtttgattttgcgtcttgttatgttgttcgtttggtatatattgaaagatcaacttcagtcaatcacaaattcaatcaa 6217826  T
Q  118 tgatttgggcgtcgacgttgcagattcggaagtatgggt--atgtca--gtgacttagaatttaccatattatttgtaggcattttaccgttgtatgcta 213  Q
    ||||||||  ||| || ||||| ||  | ||| ||| ||  || ||   |||| ||||| |||| ||||||||||||||| |||||||||||||||||||    
T  6217825 tgatttggatgtcaacattgcatatctgtaagcatgagtgaatatcctcgtgatttagattttatcatattatttgtaggtattttaccgttgtatgcta 6217726  T
Q  214 ttaacttgggtgtt 227  Q
    ||||||||| ||||    
T  6217725 ttaacttggatgtt 6217712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 51373811 - 51373734
Alignment:
Q  163 gtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttg 240  Q
    |||||||| | |||| |||||||||||||||||||||  ||| |||||||||||||||||||||||| ||||||||||    
T  51373811 gtgacttatattttatcatattatttgtaggcattttgtcgtcgtatgctattaacttgggtgttgtgagtttgtttg 51373734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 24583301 - 24583365
Alignment:
Q  179 catattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||| ||||    
T  24583301 catattatttgtaggcattttgccgttgtatgctattaacttgggtgatgtgagtttgttcgcag 24583365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 27456526 - 27456646
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    ||||||||||||| ||  ||||||||   |||||||||  |||||| | |||||||||||||  |||||||||||||||| |  ||||||||||| || |    
T  27456526 gcgttgtgttgttagtcatcttgtgcaacgtttgatttcgcgtcttgtcgcggtgttcgtttagttcctattgaaagatcgacatcagtcaattacaagt 27456625  T
Q  110 tcaattaatgatttgggcgtc 130  Q
    ||||| |||||||||||||||    
T  27456626 tcaatcaatgatttgggcgtc 27456646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 238
Target Start/End: Complemental strand, 11462447 - 11462360
Alignment:
Q  151 atgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||| || ||||||||   |||| ||||||||||||||| |||||  |||||||||||||||||||||||| ||| ||||||||    
T  11462447 atgggtatttcggtgacttaagttttatcatattatttgtaggaattttgtcgttgtatgctattaacttgggtgctgtgagtttgtt 11462360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 149
Target Start/End: Original strand, 21686859 - 21686998
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    |||||||||||||||| ||||||||||| |||||||||  ||| || | |||||||| |||   |||||||||||||||     ||| ||||||| ||||    
T  21686859 gcgttgtgttgttcgtcgtcttgtgcggcgtttgattttgcgttttgtcgcggtgtttgttaatttcctattgaaagataggcatcactcaattaaaaat 21686958  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaag 149  Q
    ||||  ||||||||||||||| || ||| |||| ||||||    
T  21686959 tcaaccaatgatttgggcgtcaacattgaagatccggaag 21686998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 21687528 - 21687597
Alignment:
Q  174 tttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||| |||||||||||||||||||||  |||| ||||||||||| ||||||||||| |||||||| ||||    
T  21687528 tttatcatattatttgtaggcattttctcgttttatgctattaatttgggtgttgtgagtttgttagcag 21687597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 93 - 158
Target Start/End: Complemental strand, 24597347 - 24597282
Alignment:
Q  93 ttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtat 158  Q
    |||||||||||||||||||||| |||||||||| |||| |||||| |||| |||||| ||||||||    
T  24597347 ttcagtcaattataaattcaatcaatgatttggacgtcaacgttgtagatccggaagcatgggtat 24597282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 218
Target Start/End: Original strand, 15492373 - 15492481
Alignment:
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||| |||||||||||||||   ||||||||| | | || |||| |||    |||| ||||| |||| ||||||||||||| |||||||||||||||||    
T  15492373 tcaatcaatgatttgggcgtcagtgttgcagatcctggagcatggatattatggtgatttagattttatcatattatttgtatgcattttaccgttgtat 15492472  T
Q  210 gctattaac 218  Q
    |||||||||    
T  15492473 gctattaac 15492481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 1602104 - 1602265
Alignment:
Q  38 tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttg 137  Q
    ||||||||||  | |||| |||||| |||||||||||| ||||||||||||| | || ||||||||| || |||||| |||||||| ||| || | ||||    
T  1602104 tgtttgattttgcatcttgttgcggcgttcgtttgatttctattgaaagatcgactt-agtcaattacaatttcaatcaatgatttaggcatcaatgttg 1602202  T
Q  138 cagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttac 201  Q
    || || |||||| | | ||||  |||| ||||| |||||| |||||||||  ||| ||||||||    
T  1602203 catatccggaagcacgtgtattccagtcactta-aatttatcatattattcatagacattttac 1602265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 41994401 - 41994541
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcag 97  Q
    |||| ||| |||||||||||||| | ||||||||| |   ||||||||||    |||| ||| |||||||||||  ||| ||||||||||||| ||||||    
T  41994401 ctgaatgcggcgttgtgttgttcatcgtcttgtgcagcgttgtttgatttcggatcttgttgtggtgttcgtttcgttcatattgaaagatcagtttcag 41994500  T
Q  98 tcaattataaattcaattaatgatttgggcgtcgacgttgc 138  Q
    ||||| | | ||| ||| |||||||||| |||| |||||||    
T  41994501 tcaatcaaatatttaatcaatgatttggacgtcaacgttgc 41994541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 940351 - 940424
Alignment:
Q  12 gttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaa 85  Q
    ||||||||||| || ||||||||||  |||||||||  |||||| | ||||||||||||| |||||||||||||    
T  940351 gttgtgttgtttgtcgtcttgtgcgacgtttgatttcgcgtcttgtcgcggtgttcgtttaattcctattgaaa 940424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 9341701 - 9341923
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcag 97  Q
    ||||||| || ||| |||||||||| ||||||||| |   |||||||||    ||||| |||||||||| ||||||||| |||| ||  ||||||| ||     
T  9341701 ctgagtggagtgttatgttgttcgtcgtcttgtgcagcgttgtttgattctgtgtcttgttgcggtgtttgtttgattcatattaaactatcaatt-caa 9341799  T
Q  98 tcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatt 197  Q
    ||||| | | |||| || |||| ||||| |||| ||| ||||||||| | || |||  |||    |||||||||| |||| ||||||||||||||| |||    
T  9341800 tcaatcacatattccatcaatgttttggacgtcaacgatgcagattcaggagcatgtatattctggtgacttagattttatcatattatttgtaggtatt 9341899  T
Q  198 ttaccgttgtatgctattaacttg 221  Q
    ||   ||||||| |||||||||||    
T  9341900 ttgttgttgtatactattaacttg 9341923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 15434987 - 15434902
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    ||||| ||||| |||||||||||||||||||||| |||||||||  |||||| | | | ||||| ||| |||||| ||||||||||    
T  15434987 agtgcggcgttctgttgttcgttgtcttgtgcggcgtttgattttgcgtcttgtcgtgatgttcatttaattcctcttgaaagatc 15434902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 238
Target Start/End: Complemental strand, 38520506 - 38520393
Alignment:
Q  126 gcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatat-tatttgtaggcattttaccgttgtatgctattaacttgggt 224  Q
    ||||| |||||||||||||||| | |||| |||  |||| ||||  | |||| | ||| | |||||||||||| ||||||| |||||||||||||||| |    
T  38520506 gcgtcaacgttgcagattcggaggcatggatattccagtcactttaattttatcgtatatttttgtaggcattataccgttatatgctattaacttggat 38520407  T
Q  225 gttgttagtttgtt 238  Q
    ||||| ||||||||    
T  38520406 gttgtgagtttgtt 38520393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 5855994 - 5856106
Alignment:
Q  109 ttcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgta 208  Q
    |||| ||||||||||| ||||| || |||||| || ||| | || |||||  || | ||||  | |||||||||||||||||||  ||||| ||||||||    
T  5855994 ttcagttaatgatttgtgcgtcaacattgcaggtttggatgcattggtattccaatcactttaattttaccatattatttgtagaaattttgccgttgta 5856093  T
Q  209 tgctattaacttg 221  Q
    |||||||||||||    
T  5856094 tgctattaacttg 5856106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 7312173 - 7312100
Alignment:
Q  14 tgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| ||||||||||   ||||||||||  |||||| ||||||||||| |||||||| ||||||||||||    
T  7312173 tgtgttgttcattgtcttgtgt--tgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagatc 7312100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 19596402 - 19596354
Alignment:
Q  174 tttaccatattatttgtaggcattttaccgttgtatgctattaacttgg 222  Q
    |||| ||||||||||||||||||||| ||||| ||||||||||||||||    
T  19596402 tttatcatattatttgtaggcattttgccgttttatgctattaacttgg 19596354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 32679078 - 32679014
Alignment:
Q  179 catattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||| |||||||||||||| ||||| ||||| |||||||||| |||||| |||||||| ||||    
T  32679078 catattttttgtaggcattttgccgttatatgccattaacttggatgttgtgagtttgttcgcag 32679014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 247
Target Start/End: Original strand, 50377462 - 50377546
Alignment:
Q  163 gtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcagtttc 247  Q
    |||||||||| |||| |||||| | |||||||||||| |||| ||||| |||||||||||||| ||  |||||||| ||| ||||    
T  50377462 gtgacttagattttatcatattgtctgtaggcatttttccgtcgtatgttattaacttgggtgctgagagtttgttcgcaatttc 50377546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 217
Target Start/End: Complemental strand, 32873918 - 32873763
Alignment:
Q  62 gtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtc 161  Q
    ||||||||||  ||||||||||| || | | |||||||||||| | ||| ||| ||||||||  ||||| | ||||||||| | |||  |||||||| ||    
T  32873918 gtgttcgtttagttcctattgaatgaccgacttcagtcaattacacatttaatcaatgatttaagcgtcaatgttgcagatccagaaacatgggtatttc 32873819  T
Q  162 agtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaa 217  Q
      | |||| || |||| |||||||||||||| ||| ||  | ||||||||||||||    
T  32873818 gatcactttgattttatcatattatttgtagacatattgtcattgtatgctattaa 32873763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 243
Target Start/End: Original strand, 41740515 - 41740594
Alignment:
Q  164 tgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||| | |||| |||||||||| || ||||| | |||||||||| ||||||||| | ||||||||||||||| ||||    
T  41740515 tgacttatattttatcatattatttataagcattcttccgttgtatgttattaacttagatgttgttagtttgttcgcag 41740594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 9172500 - 9172576
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||   |||||| |||  |||||| ||||||||||| ||| |||||||||||||||||    
T  9172500 tgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatc 9172576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 9180482 - 9180558
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||   |||||| |||  |||||| ||||||||||| ||| |||||||||||||||||    
T  9180482 tgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatc 9180558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 11462548 - 11462462
Alignment:
Q  16 tgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaat 102  Q
    |||||||||| ||||||||||| |||||||||  |||||| | |||||||| ||||  ||||||||| |||||| |  |||||||||    
T  11462548 tgttgttcgtcgtcttgtgcggcgtttgatttcacgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaat 11462462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 27456648 - 27456698
Alignment:
Q  188 tgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    ||||| ||||||  |||||||||||||||||||||||||||| ||||||||    
T  27456648 tgtagacattttgtcgttgtatgctattaacttgggtgttgtgagtttgtt 27456698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 34519142 - 34519218
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| || ||||||||   |||||||||| ||||||| ||| ||||||| |||||||| ||||||||||||    
T  34519142 tgttgttcgtcgttttgtgcggcgttgtttgatttctcgtcttcttgtggtgttcatttgattcatattgaaagatc 34519218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 35584689 - 35584613
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||   ||||||||||  ||||||  |||||||||| |||||||| ||||||||||||    
T  35584689 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 35584613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 50166170 - 50166094
Alignment:
Q  16 tgttgttcgttgtcttgtgcggtgtt---tgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| ||||||||||| |||   || ||| ||||||| ||||||||||| ||| |||||||||||||||||    
T  50166170 tgttgttcgtcgtcttgtgcggcgttatttgctttctcgtcttcttgcggtgttcattttattcctattgaaagatc 50166094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 51868716 - 51868640
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||   |||||| ||| ||||||| ||||||||||| ||| |||| ||||||||||||    
T  51868716 tgttgttcgtcgtcttgtgcggcgttgtttgctttctcgtcttcttgcggtgttcattttattcttattgaaagatc 51868640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 34529232 - 34529293
Alignment:
Q  182 attatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||||||||||||||   ||||||| ||||||||||||||| ||| |||||||| ||||    
T  34529232 attatttgtaggcatttttttgttgtatactattaacttgggtgatgtgagtttgttcgcag 34529293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 187
Target Start/End: Complemental strand, 35462091 - 35461978
Alignment:
Q  74 ttcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaa 173  Q
    ||||| |||| ||||| || ||||||||||| ||||| ||  ||||||| || |||| ||||||||||| |||||| ||| |||| || ||||||||       
T  35462091 ttcctcttgagagatctatatcagtcaattacaaattaaaccaatgattcggacgtcaacgttgcagatccggaagcatgtgtatttcggtgacttaagt 35461992  T
Q  174 tttaccatattatt 187  Q
    |||| |||||||||    
T  35461991 tttatcatattatt 35461978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 3871579 - 3871631
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||| | ||||| |||||||||||||||| |||||| ||||||||    
T  3871579 tttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgtt 3871631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 30879086 - 30879161
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg--tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| ||||||||||   ||||||||||  ||||||  |||||||||| |||||||| ||||||||||||    
T  30879086 tgttgttcgtcgtcttgtgcgcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 30879161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 123
Target Start/End: Original strand, 34528707 - 34528829
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtt---tgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtca 100  Q
    ||||| || ||||||||||||| |||||| ||||||||   ||||||  | |||| || |||||||  |||| ||  |||||||||||||| ||||||||    
T  34528707 agtgcggcattgtgttgttcgtcgtcttgcgcggtgttgtttgatttcgcatcttgtttcggtgtttctttggtttatattgaaagatcaacttcagtca 34528806  T
Q  101 attataaattcaattaatgattt 123  Q
    || | | ||||||| ||||||||    
T  34528807 atcacagattcaatcaatgattt 34528829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 39927627 - 39927549
Alignment:
Q  14 tgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||||| |||||||| ||   ||||||||||  |||||| ||||||||||| |||| ||| ||||||||||||    
T  39927627 tgtgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttgttgcggtgttcatttgtttcatattgaaagatc 39927549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 199
Target Start/End: Original strand, 43412401 - 43412549
Alignment:
Q  51 gtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagt 150  Q
    |||| ||||| ||||| ||||||||| |||||||| ||| |||||| |||||   | ||||||| |||||||||   ||| ||||||||||| | ||||     
T  43412401 gtctaattgcagtgtttgtttgattcatattgaaatatctatttcaatcaatcgcatattcaatcaatgatttgaaagtcaacgttgcagatccagaagc 43412500  T
Q  151 atgggtatgtcagtgacttagaatttaccatattatttgtaggcatttt 199  Q
    ||| |||| |  ||||  |||| |||| ||||||||||| ||| |||||    
T  43412501 atgcgtattttggtgatctagattttatcatattatttgcaggtatttt 43412549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 50166009 - 50165957
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||| | ||||| |||||||||||||||| |||||| ||||||||    
T  50166009 tttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgtt 50165957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 5701432 - 5701487
Alignment:
Q  188 tgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||| | ||||| |||||||||||||||| |||||| |||||||| ||||    
T  5701432 tgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcag 5701487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 142
Target Start/End: Complemental strand, 49648939 - 49648848
Alignment:
Q  51 gtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagat 142  Q
    ||||| ||||||||||  |||| ||| ||| |||||||  | ||||  |||||||| ||||||||||||||||| ||||| |||||| ||||    
T  49648939 gtcttgttgcggtgtttatttggttcttatcgaaagattgacttcaaccaattatacattcaattaatgatttgtgcgtcaacgttgtagat 49648848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 5324629 - 5324557
Alignment:
Q  16 tgttgttcgttgtcttgtgcggt---gtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaa 85  Q
    |||||||||  ||||||||||||   |||||||||  |||||| ||||||||||| |||||||| ||||||||    
T  5324629 tgttgttcgccgtcttgtgcggtattgtttgatttcccgtctttttgcggtgttcatttgattcatattgaaa 5324557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 5701269 - 5701341
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaa 85  Q
    |||||||||| |||||||||||   ||||||||||  ||||||  |||||||||| |||||||| ||||||||    
T  5701269 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaa 5701341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 7342732 - 7342808
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||   |||||| |||  |||||| ||||| ||||| ||| |||||||||||||||||    
T  7342732 tgttgttcgtcgtcttgtgcggcgttgtttgttttcccgtcttcttgcgttgttcattttattcctattgaaagatc 7342808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 9687275 - 9687199
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    ||||||||||  ||||||||||   ||||||||||  | |||| ||||||||||| |||||||| ||||||||||||    
T  9687275 tgttgttcgtcatcttgtgcggcgttgtttgatttcccatcttcttgcggtgttcatttgattcatattgaaagatc 9687199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 9919399 - 9919475
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| ||||||| |||   |||||| |||  |||||| ||||||||||| ||| |||||||||||||||||    
T  9919399 tgttgttcgtcgtcttgtacggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatc 9919475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 19715966 - 19715890
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| ||||||||| |   ||||||||||  ||||||  |||||||||| |||||||| ||||||||||||    
T  19715966 tgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 19715890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 28035149 - 28035225
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||   ||||||||||  ||||||  | |||||||| |||||||| ||||||||||||    
T  28035149 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtacggtgttcatttgattcatattgaaagatc 28035225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 31836817 - 31836889
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaa 85  Q
    |||||||||| |||||||||||   ||||||||||  ||||||  |||||||||| |||||||| ||||||||    
T  31836817 tgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaa 31836889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 44637429 - 44637509
Alignment:
Q  14 tgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaa 91  Q
    |||||||||||| ||||||||||    |||||| |||  |||||| || |||||||| |||||||| ||||||||||||||    
T  44637429 tgtgttgttcgtagtcttgtgcgacgttgtttggtttcccgtcttgttacggtgttcatttgattcatattgaaagatcaa 44637509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 7997960 - 7998017
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| | ||||| |||| ||||||||||| || ||| |||||||||||||    
T  7997960 tttgtaggcattatgccgttatatgttattaacttggatgatgtgagtttgtttgcag 7998017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 14489411 - 14489472
Alignment:
Q  163 gtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggt 224  Q
    |||| ||||| |||| ||||||||||||||| |||||   |||||||| |||||||||||||    
T  14489411 gtgatttagattttatcatattatttgtaggtattttgttgttgtatgttattaacttgggt 14489472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 25406194 - 25406137
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| | ||||| |||||||||||||||| || ||| |||||||| ||||    
T  25406194 tttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcag 25406137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 33291489 - 33291414
Alignment:
Q  16 tgttgttcgttgtcttgtgcggtgtt---tgatttatcgtcttattgcggtgttcgtttgattcctattgaaagat 88  Q
    |||||||||| |||||||||||||||   ||||||  |||| |  |||||||||| |||||||| |||||||||||    
T  33291489 tgttgttcgtcgtcttgtgcggtgttgtttgattttccgtcgtcgtgcggtgttcatttgattcatattgaaagat 33291414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 40880923 - 40880866
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| | | ||| |||||||||||||||| |||||| |||||||| ||||    
T  40880923 tttgtaggcattatgctgttatatgctattaacttggatgttgtgagtttgttcgcag 40880866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 41903740 - 41903855
Alignment:
Q  13 ttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    |||||||||| ||||||||||||||   |||||||||   ||| ||||| || |||||||||| ||||||| |||| |  || |||| |||||||   ||    
T  41903740 ttgtgttgtttgttgtcttgtgcggtattgtttgattacgcgtgttatttcgatgttcgtttgcttcctatagaaacactaacttcaatcaattaattat 41903839  T
Q  110 tcaattaatgatttgg 125  Q
    ||||| ||||||||||    
T  41903840 tcaatcaatgatttgg 41903855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 45425976 - 45425927
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagttt 235  Q
    |||||||||||| ||||||| |||||||||||||||| || ||| |||||    
T  45425976 tttgtaggcattataccgttatatgctattaacttggatgctgtgagttt 45425927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 50272050 - 50271993
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| | ||||| |||||||||||||| | |||||| |||||||| ||||    
T  50272050 tttgtaggcattatgccgttatatgctattaacttagatgttgtgagtttgttcgcag 50271993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 52854259 - 52854214
Alignment:
Q  15 gtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgc 60  Q
    ||||||||| | |||||||||| |||||||||| ||||||||||||    
T  52854259 gtgttgttcatcgtcttgtgcgatgtttgatttctcgtcttattgc 52854214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 5600924 - 5600984
Alignment:
Q  183 ttatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||||| ||||||||| |||| | |||| | |||| |||||||| ||||    
T  5600924 ttatttgtaggcattttatcgttgtatgttatttatttggatattgtgagtttgttcgcag 5600984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 242
Target Start/End: Complemental strand, 19885220 - 19885152
Alignment:
Q  174 tttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgca 242  Q
    |||| ||||||||||  || ||||||| | || ||| ||| ||||||||||||||| ||||||||||||    
T  19885220 tttatcatattatttagagacattttatcattatatactactaacttgggtgttgtaagtttgtttgca 19885152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 25406353 - 25406279
Alignment:
Q  18 ttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||| |||||||| ||   |||||| |||  |||||| ||||||||||| ||| |||||||||||||||||    
T  25406353 ttgttcgtcgtcttgtgtggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatc 25406279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 242
Target Start/End: Complemental strand, 28053659 - 28053591
Alignment:
Q  174 tttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgca 242  Q
    |||| ||||||||||||||||||||||  |||||||| | || |||||| |||| | ||||| ||||||    
T  28053659 tttatcatattatttgtaggcattttattgttgtatgatctttacttggatgttatgagtttatttgca 28053591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 89
Target Start/End: Complemental strand, 30506231 - 30506199
Alignment:
Q  57 ttgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||||||||| ||||||||||||||||    
T  30506231 ttgcggtgttcgtttgcttcctattgaaagatc 30506199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 32677121 - 32677081
Alignment:
Q  107 aattcaattaatgatttgggcgtcgacgttgcagattcgga 147  Q
    |||||||| || |||||||||||| ||||||||||||||||    
T  32677121 aattcaatcaaagatttgggcgtcaacgttgcagattcgga 32677081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 33291409 - 33291369
Alignment:
Q  107 aattcaattaatgatttgggcgtcgacgttgcagattcgga 147  Q
    |||||||| || |||||||||||| ||||||||||||||||    
T  33291409 aattcaatcaaagatttgggcgtcaacgttgcagattcgga 33291369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 33817231 - 33817176
Alignment:
Q  33 tgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||| |||||||||| ||||||| || |||||||| |||||||| ||||||||||||    
T  33817231 tgcgttgtttgatttctcgtcttttt-cggtgttcatttgattcatattgaaagatc 33817176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 33876701 - 33876646
Alignment:
Q  33 tgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||| |||||||||| ||||||| || |||||||| |||||||| ||||||||||||    
T  33876701 tgcgttgtttgatttctcgtcttttt-cggtgttcatttgattcatattgaaagatc 33876646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 39987401 - 39987475
Alignment:
Q  18 ttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||| |||||||||||   ||||||||||  ||| ||  |||||||||| |||||||| ||||||||||||    
T  39987401 ttgttcgtcgtcttgtgcggcgttgtttgattttccgtattgctgcggtgttcatttgattcatattgaaagatc 39987475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 127
Target Start/End: Complemental strand, 40163506 - 40163418
Alignment:
Q  39 gtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggc 127  Q
    |||||||||  | |||||||| |||||| ||||| || |||||| |||||||  |||||||||  | ||||| ||| ||||||||||||    
T  40163506 gtttgatttcgcctcttattgtggtgtttgtttggtttctattgcaagatcagcttcagtcaaacaaaaatttaatcaatgatttgggc 40163418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 50377314 - 50377418
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    |||||||||||||||| || || || ||  ||||||||  |||||| | ||||||| |||||  | |||||||||||||| |  ||||||||||| |||     
T  50377314 gcgttgtgttgttcgtcgttttttgtggcatttgatttcgcgtcttgtcgcggtgtacgtttagtccctattgaaagatcgacatcagtcaattacaaag 50377413  T
Q  110 tcaat 114  Q
    |||||    
T  50377414 tcaat 50377418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 1e-50; HSPs: 111)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 14 - 243
Target Start/End: Original strand, 2520786 - 2521015
Alignment:
Q  14 tgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaa 113  Q
    |||||||||||| ||||||||||| |||||||||  ||| || | ||| |||| |||  ||||||||||||||||| |  ||| ||||||| ||||| ||    
T  2520786 tgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcgatgtttgttcaattcctattgaaagatctacatcaatcaattacaaattaaa 2520885  T
Q  114 ttaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgcta 213  Q
      |||||||||| |||| ||||||||||| |||||| |||||||| || |||| ||||| |||| | ||||||||||||||||||| |||||||||||||    
T  2520886 gcaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgatttagattttatcgtattatttgtaggcattttgccgttgtatgcta 2520985  T
Q  214 ttaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||| |||||||| ||||    
T  2520986 ttaacttgggtgttgtgagtttgttcgcag 2521015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 22611180 - 22611419
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||  ||| || | |||||||| |||   |||||||||||||||| |  ||||||||||    
T  22611180 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgattttgcgttttgtcgcggtgtttgttcagttcctattgaaagatctacatcagtcaatt 22611279  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| ||||||||||| |||||| ||| |||| || ||||||||   |||| ||||||||||||||||||||| |||    
T  22611280 acaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttgtaggcattttgccg 22611379  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||| |||||| ||||||| ||| |||||||| ||||    
T  22611380 ttgtatggtattaaattgggtgctgtgagtttgttcgcag 22611419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 234
Target Start/End: Original strand, 53811031 - 53811255
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    ||||| |||||||||| ||||||||||| |||||||||  ||| || | |||| ||| |||   |||||||||||||||| |  ||||||||||| ||||    
T  53811031 gcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggggtttgttcagttcctattgaaagatctacatcagtcaattacaaat 53811130  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||  |||||||||| |||| ||||||||||| |||||| ||| |||| || ||||||||   |||| |||||||||||||||||||||  ||||||||    
T  53811131 tcaaccaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttgtaggcattttggcgttgtat 53811230  T
Q  210 gctattaacttgggtgttgttagtt 234  Q
    |||||||||||||||||||| ||||    
T  53811231 gctattaacttgggtgttgtgagtt 53811255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 236
Target Start/End: Complemental strand, 56040758 - 56040526
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||| |||||||||| ||||||||||| |||| ||||  |||||| | || ||||| ||||  ||||||||| |||||| |  ||||||||||    
T  56040758 agtgcggcgttttgttgttcgtcgtcttgtgcggcgtttaattttgcgtcttgtcgcagtgtttgtttagttcctattggaagatctacatcagtcaatt 56040659  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  ||||||||||||| | ||||||||||| | |||| |||||||| || |||||||||  |||| |||||||||||||||||||||  ||    
T  56040658 acaaattcaaccaatgatttgggcggcaacgttgcagatccagaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcattttgtcg 56040559  T
Q  204 ttgtatgctattaacttgggtgttgttagtttg 236  Q
    ||||||||||||||||||| || ||| ||||||    
T  56040558 ttgtatgctattaacttggatgctgtgagtttg 56040526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 19853624 - 19853385
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| ||||| || ||  ||||||||  ||| ||||  ||||||| |||   |||||||||||||||| |  ||| ||||||    
T  19853624 agtgcggcgttgtgttgttcgtcgtcttatgtggcatttgattttgcgttttatcacggtgtttgttcagttcctattgaaagatctacatcactcaatt 19853525  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| ||||||||||| |||||| |||| ||| || ||||||||   |||| |||||||||| |||||||||| |||    
T  19853524 acaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatggatatttcggtgacttaagttttatcatattatttctaggcattttgccg 19853425  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||||||||||||| |||||||| ||||    
T  19853424 ttgtatgctattaacttgggtgttgtgagtttgttcgcag 19853385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 12199808 - 12199567
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtca 100  Q
    |||||||  |||||||||||||| | || |||||| |  ||||||||  |||||| |||||||||||||||  ||| |||||||| ||||| ||||||||    
T  12199808 ctgagtgtggcgttgtgttgttcatcgttttgtgcagcttttgattttgcgtcttgttgcggtgttcgtttagttcatattgaaatatcaacttcagtca 12199709  T
Q  101 attataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatttta 200  Q
     ||| | ||||||| || |||||| ||||||||||| |||||||||||| ||| | || |  | ||||||||||||| ||||||||||||||| ||||||    
T  12199708 gttacagattcaatcaaagatttgagcgtcgacgttacagattcggaagcatgagaattttggcgacttagaatttatcatattatttgtaggtatttta 12199609  T
Q  201 ccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    | |||||||| |||| ||||||||||||| |||||||| ||||    
T  12199608 ctgttgtatgttatt-acttgggtgttgtgagtttgttcgcag 12199567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 12 - 238
Target Start/End: Original strand, 32766519 - 32766745
Alignment:
Q  12 gttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattc 111  Q
    |||||||||||||| ||||||||||| |||||||||  ||| || | |||||||| |||   |||||||| ||||||| |  ||||||||||| ||||||    
T  32766519 gttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgttttgtcgcggtgtttgttcagttcctattaaaagatctacatcagtcaattacaaattc 32766618  T
Q  112 aattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgc 211  Q
    ||| |||||||||| |||| | ||||||||| |||||  |||||||| || ||||||||   |||| ||||||||||||||||||| |  ||||||||||    
T  32766619 aatcaatgatttggacgtcaatgttgcagatccggaaacatgggtatttcggtgacttaagttttatcatattatttgtaggcattatgtcgttgtatgc 32766718  T
Q  212 tattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||||| ||| ||||||||    
T  32766719 tattaacttgggtgctgtgagtttgtt 32766745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 38 - 247
Target Start/End: Original strand, 21662468 - 21662677
Alignment:
Q  38 tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttg 137  Q
    ||||||||||  |||||| | ||||| |||||||  ||||||||||||||||||  ||||||||||| |||| |||| ||||||||| ||||| ||||||    
T  21662468 tgtttgatttcgcgtcttgtcgcggtattcgtttagttcctattgaaagatcaacatcagtcaattacaaatccaatcaatgatttgagcgtcaacgttg 21662567  T
Q  138 cagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgt 237  Q
    ||||| |||||| |||||||| || |||||||||  |||| |||||||||||||| || |||   ||||||||||||||||||| ||||||| || ||||    
T  21662568 cagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtagacactttggtgttgtatgctattaacttgagtgttgtgaggttgt 21662667  T
Q  238 ttgcagtttc 247  Q
    | ||||||||    
T  21662668 tcgcagtttc 21662677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 38 - 247
Target Start/End: Original strand, 21671232 - 21671441
Alignment:
Q  38 tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttg 137  Q
    ||||||||||  |||||| | ||||| |||||||  ||||||||||||||||||  ||||||||||| |||| |||| ||||||||| ||||| ||||||    
T  21671232 tgtttgatttcgcgtcttgtcgcggtattcgtttagttcctattgaaagatcaacatcagtcaattacaaatccaatcaatgatttgagcgtcaacgttg 21671331  T
Q  138 cagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgt 237  Q
    ||||| |||||| |||||||| || |||||||||  |||| |||||||||||||| || |||   ||||||||||||||||||| ||||||| || ||||    
T  21671332 cagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtagacactttggtgttgtatgctattaacttgagtgttgtgaggttgt 21671431  T
Q  238 ttgcagtttc 247  Q
    | ||||||||    
T  21671432 tcgcagtttc 21671441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 4 - 238
Target Start/End: Original strand, 33921048 - 33921285
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||  ||||| ||||  |||||||||  |||||| | || ||||||||||  |||||||||||||||| |  || |||||||    
T  33921048 agtgcggcgttgtgttgttcgccgtcttatgcgacgtttgatttcacgtcttgtcgcagtgttcgtttagttcctattgaaagatcgacatc-gtcaatt 33921146  T
Q  104 ataaa----ttcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatttt 199  Q
    | |||    |||||| ||| ||||| ||||| ||||||||||| |||||| |||||||| ||||||||||||| |||| ||||||||||||||||||| |    
T  33921147 acaaacaaattcaatcaataatttgagcgtcaacgttgcagatccggaagcatgggtatttcagtgacttagattttatcatattatttgtaggcattgt 33921246  T
Q  200 accgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |  |||||||||||||||||||| |||||| ||||||||    
T  33921247 atagttgtatgctattaacttggatgttgtgagtttgtt 33921285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 10496332 - 10496571
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||| |||||||||||| |||||||| |  |||||||||  |||||| | || ||||||||||  ||||||||||||||||    ||||||||||    
T  10496332 agtgcggcgatgtgttgttcgtcgtcttgtgtgacgtttgattttgcgtcttgtcgcagtgttcgtttagttcctattgaaagatcggcatcagtcaatt 10496431  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  ||||||||||||||| || |||||||| || ||| |||||||| || |||| ||||  |||| ||||||||||||||||||||| | |    
T  10496432 acaaattcaaccaatgatttgggcgtcaactttgcagatccgtaagcatgggtatttcggtgagttaggttttatcatattatttgtaggcattttgctg 10496531  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    | |||||||||||||||||||| | | |||||||| ||||    
T  10496532 tcgtatgctattaacttgggtgctttgagtttgttcgcag 10496571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 17949436 - 17949197
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||||||||||| || || |||||||| |||||||||  ||| || | ||||||||||||| ||||||||||||||||| |  ||||||||||    
T  17949436 agtgcggcgttgtgttgtttgtcgtgttgtgcggcgtttgattttgcgttttgtcgcggtgttcgtttaattcctattgaaagatctacatcagtcaatt 17949337  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  ||||||| | ||||| ||||||||||| |||||| |||||||| |   ||||||||  |||| |||||||| |||| |||||||        
T  17949336 acaaattcaaccaatgattggagcgtcaacgttgcagatccggaagaatgggtattttgatgacttaggttttatcatattatatgtatgcattttgttc 17949237  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||| |||||||||||||||||| |||||||| ||||    
T  17949236 ttgtatgttattaacttgggtgttgtgagtttgttcgcag 17949197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 17953288 - 17953049
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||||||||||| || || |||||||| |||||||||  ||| || | ||||||||||||| ||||||||||||||||| |  ||||||||||    
T  17953288 agtgcggcgttgtgttgtttgtcgtgttgtgcggcgtttgattttgcgttttgtcgcggtgttcgtttaattcctattgaaagatctacatcagtcaatt 17953189  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  ||||||| | ||||| ||||||||||| |||||| |||||||| |   ||||||||  |||| |||||||| |||| |||||||        
T  17953188 acaaattcaaccaatgattggagcgtcaacgttgcagatccggaagaatgggtattttgatgacttaggttttatcatattatatgtatgcattttgttc 17953089  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||| |||||||||||||||||| |||||||| ||||    
T  17953088 ttgtatgttattaacttgggtgttgtgagtttgttcgcag 17953049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 35348304 - 35348543
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||    |||| ||| |||||||||||  || |||||||||||||      ||||||||    
T  35348304 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgtttcttgttgtggtgttcgtttagttactattgaaagatcggcgatagtcaatt 35348403  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||| |||  ||| ||||||||||| |||||| ||| | || ||| ||||||||  |||| ||||||||||||||||||||| ||     
T  35348404 acaaattcaaccaatgatctggatgtcaacgttgcagatccggaagcatgtgaatttcaatgacttaggttttatcatattatttgtaggcattttgcca 35348503  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    || ||||||||||||||||||||||| |||||||||||||    
T  35348504 ttttatgctattaacttgggtgttgtgagtttgtttgcag 35348543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 53444122 - 53444349
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaatt 110  Q
    ||||||||||||||| |||||||||||| ||||||||  ||| || | |||||||| ||||  ||||||||||||||||    ||||||||||| |||||    
T  53444122 cgttgtgttgttcgtcgtcttgtgcggtatttgatttcgcgttttgtcgcggtgtttgtttatttcctattgaaagatcggcatcagtcaattacaaatt 53444221  T
Q  111 caattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatg 210  Q
    |||  ||||||||||||||| | |||| |||| |||||| ||| | || || |||||||||  |||| ||||||||||||||  ||||| ||||| ||||    
T  53444222 caaccaatgatttgggcgtcaatgttgaagatccggaagcatgtgaatttcggtgacttaggttttatcatattatttgtagatatttttccgttttatg 53444321  T
Q  211 ctattaacttgggtgttgttagtttgtt 238  Q
    ||||||||||||||| ||| ||||||||    
T  53444322 ctattaacttgggtgctgtgagtttgtt 53444349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 16 - 243
Target Start/End: Complemental strand, 24099167 - 24098942
Alignment:
Q  16 tgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaatt 115  Q
    |||||||||| ||||||||||| | |||||||  |||||| | |||| ||| |||   |||||||||||||||| |  ||| ||||||| ||||||||      
T  24099167 tgttgttcgtcgtcttgtgcggcgattgatttcgcgtcttgtcgcggagtttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagc 24099068  T
Q  116 aatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctatt 215  Q
    |||||||||| |||| ||||||||||| |||||  |||||||| ||||||||||||  |||| ||||||||||||||||||||| |||||| ||||||||    
T  24099067 aatgatttggacgtcaacgttgcagatccggaaacatgggtatttcagtgacttaggttttatcatattatttgtaggcattttgccgttg-atgctatt 24098969  T
Q  216 aacttgggtgttgttagtttgtttgcag 243  Q
    ||||| |||| ||| |||||||| ||||    
T  24098968 aactt-ggtgctgtgagtttgttcgcag 24098942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 234
Target Start/End: Original strand, 8670482 - 8670712
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||||||||||| ||  ||||||||||||||||||||  || ||| | |||||||||||||  ||||||||||||||||    ||||||||||    
T  8670482 agtgcggcgttgtgttgttagtcatcttgtgcggtgtttgatttcgcgacttgtcgcggtgttcgtttatttcctattgaaagatcggcatcagtcaatt 8670581  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  ||||||||||||||| |||||| |||| || ||| ||| | || || ||||||||| ||||| ||||||||||| ||||||||| ||     
T  8670582 acaaattcaaccaatgatttgggcgtcaacgttgaagatccgaaagcatgtgaatttcggtgacttaggatttatcatattatttgaaggcattttgcca 8670681  T
Q  204 ttgtatgctattaacttgggtgttgttagtt 234  Q
    || | ||| |||||||||| |||||| ||||    
T  8670682 ttttgtgcaattaacttggctgttgtgagtt 8670712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 238
Target Start/End: Original strand, 13634112 - 13634346
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| ||||||||||  ||| |||||  |||||| | |||||||| |||   |||||||||||||||| |  ||| ||||||    
T  13634112 agtgcggcgttgtgttgttcgtcgtcttgtgcgaggttagatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatcaatt 13634211  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  || ||||||| |||| ||||||||||| |||||  |||||||| ||||||| ||||  |||| | ||||||||||||  ||||| |||    
T  13634212 acaaattcaagcaacgatttggacgtcaacgttgcagatccggaaacatgggtatttcagtgatttaggttttatcttattatttgtagttattttgccg 13634311  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||||||||||||| ||| | ||||||    
T  13634312 ttgtatgctattaacttgggtgctgtgaatttgtt 13634346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 243
Target Start/End: Complemental strand, 52061026 - 52060796
Alignment:
Q  13 ttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattca 112  Q
    ||||| ||||||| ||||||| ||| ||||||||    ||||| ||| ||||||||||| ||||||||||||||||||| |||||||||||| | |||||    
T  52061026 ttgtgatgttcgtcgtcttgtacggcgtttgattatgtgtcttgttgaggtgttcgtttaattcctattgaaagatcaacttcagtcaattacagattca 52060927  T
Q  113 attaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgct 212  Q
    || |||||||||||||| || |||| ||||   |||| |||| ||| ||| |||||| ||||||| |||||| ||||||||||||||   ||||||| ||    
T  52060926 atcaatgatttgggcgttgatgttgtagatctagaagcatggatatttcaatgactttgaatttatcatattttttgtaggcattttgttgttgtatact 52060827  T
Q  213 attaacttgggtgttgttagtttgtttgcag 243  Q
    ||||| |||  |||| | |||||||||||||    
T  52060826 attaatttgaatgttatgagtttgtttgcag 52060796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 10 - 243
Target Start/End: Complemental strand, 56156748 - 56156515
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    |||||||||||||||| |||||||| || |||||||||  |||||| | |||||||||||||  ||||| ||||||||| ||  ||||||||||| ||||    
T  56156748 gcgttgtgttgttcgtcgtcttgtgtggcgtttgatttcgcgtcttgtcgcggtgttcgtttagttcctcttgaaagattaacatcagtcaattacaaat 56156649  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||  ||||||| ||||||| || ||||||||  ||||| ||| | || || ||||||||   |||| ||  ||||||||||||||||| ||||| |||    
T  56156648 tcaaccaatgattggggcgtcaacattgcagatctggaagcatgtgaatttcggtgacttatgttttatcaatttatttgtaggcattttgccgttttat 56156549  T
Q  210 gctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||| || |||||||||| |||||||| ||||    
T  56156548 gctatttacctgggtgttgtgagtttgttcgcag 56156515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 14 - 238
Target Start/End: Complemental strand, 21686344 - 21686120
Alignment:
Q  14 tgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaa 113  Q
    |||||||||||| ||||||||||| |||||||||  ||||||   |||||||| |||   |||||||||||||||| |  ||| ||| ||| ||||||||    
T  21686344 tgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgccgcggtgtttgttcagttcctattgaaagatctacatcaatcagttacaaattcaa 21686245  T
Q  114 ttaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgcta 213  Q
      |||||||||| |||| ||||||||||| |||||| ||| |||| |  |||| ||||  |||| ||||||||||||||||||||| ||| |||||| ||    
T  21686244 gcaatgatttggacgtcaacgttgcagatccggaagcatgagtattttggtgatttaggttttatcatattatttgtaggcattttgccgctgtatgtta 21686145  T
Q  214 ttaacttgggtgttgttagtttgtt 238  Q
    |||||||||||| ||| ||||||||    
T  21686144 ttaacttgggtgctgtgagtttgtt 21686120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 52944302 - 52944526
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcag 97  Q
    |||||||| |||||||||||||||| || ||||||||   ||||| ||||  |||||| |||||||||||||||| ||| |||||||||||||  |||||    
T  52944302 ctgagtgcggcgttgtgttgttcgtcgttttgtgcggcgttgtttaattttgcgtcttgttgcggtgttcgtttgtttcatattgaaagatcagcttcag 52944401  T
Q  98 tcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatt 197  Q
    ||||| | | |||||||  ||||||||| |||| ||||||||||| |||||| ||||||||    |||| ||||| || | |||||| ||||||||||||    
T  52944402 tcaatcacagattcaatcgatgatttggacgtcaacgttgcagatccggaagcatgggtattctggtgatttagatttcatcatattttttgtaggcatt 52944501  T
Q  198 ttaccgttgtatgctattaacttgg 222  Q
    ||   ||| ||||||||||||||||    
T  52944502 ttgtagttatatgctattaacttgg 52944526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 37030255 - 37030492
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtca 100  Q
    |||||| | |||||||||||||||| |||||||  || |||||||||   ||||| | ||||||| |||||| || ||||  ||||||||| |||| |||    
T  37030255 ctgagtacggcgttgtgttgttcgtcgtcttgtatggcgtttgatttcatgtcttgtcgcggtgtacgtttggtttctatcaaaagatcaacttcaatca 37030354  T
Q  101 attataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatttta 200  Q
    | || | ||||||| |||||||||| | ||||||||||||||    ||  |||||||| |||||||||||||| ||| |||||||||||||| |||||      
T  37030355 aatacagattcaatcaatgatttggacatcgacgttgcagatcgaaaaacatgggtatttcagtgacttagaaattatcatattatttgtagacatttag 37030454  T
Q  201 ccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    || |||||||||||||||||||||| ||| | ||||||    
T  37030455 ccattgtatgctattaacttgggtgctgtaaatttgtt 37030492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 18935833 - 18936018
Alignment:
Q  58 tgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggta 157  Q
    ||||||||||||||| ||| ||||||||||| || ||||| |||| | |||||||||||||||||||||| || ||||||||||| |  ||| || ||||    
T  18935833 tgcggtgttcgtttggttcgtattgaaagattaacttcagacaatcaaaaattcaattaatgatttgggcatcaacgttgcagatccaaaagcataggta 18935932  T
Q  158 tgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |    |||| ||||| || | ||||||||||||||||||||| |  ||||| | |||||||||||||||||| |||||||||||||    
T  18935933 ttctggtgatttagatttcatcatattatttgtaggcattttgctattgtacgttattaacttgggtgttgtgagtttgtttgcag 18936018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 58 - 238
Target Start/End: Complemental strand, 31891345 - 31891165
Alignment:
Q  58 tgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggta 157  Q
    ||||||||||||||| ||| |||||||| |||| |||||| |||| | ||||||||   |||||||||||||| |||||||| || | |||| ||| |||    
T  31891345 tgcggtgttcgtttggttcgtattgaaaaatcagtttcagacaatcacaaattcaaaccatgatttgggcgtcaacgttgcaaatccagaagcatgagta 31891246  T
Q  158 tgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |    |||| ||||| || |  |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  31891245 ttctggtgatttagatttcattatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgtt 31891165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 221
Target Start/End: Original strand, 54021866 - 54022073
Alignment:
Q  13 ttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattca 112  Q
    |||||||||| || ||||||||||| |||||||||   ||||| | |||||||||||||  |||||||||||||||| |  ||||||||||| ||||| |    
T  54021866 ttgtgttgttagtcgtcttgtgcggcgtttgatttcgtgtcttgtcgcggtgttcgtttagttcctattgaaagatcgacatcagtcaattacaaattga 54021965  T
Q  113 attaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgct 212  Q
    || ||||||||||  ||| ||||||||||| || ||  |||| ||| || |||||||||| |||| |||||||||||||| || |||  ||||||||| |    
T  54021966 atcaatgatttggatgtcaacgttgcagatccgaaaacatggatatttcggtgacttagattttatcatattatttgtagaca-tttgtcgttgtatgtt 54022064  T
Q  213 attaacttg 221  Q
    |||||||||    
T  54022065 attaacttg 54022073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 26633783 - 26633544
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| |||||||||||  || || ||  |||||| | || ||||| |||   |||||||||||||||| |  |||||| |||    
T  26633783 agtgcggcgttgtgttgttcgtcgtcttgtgcggcattggacttcgcgtcttgtcgcagtgtttgttcagttcctattgaaagatctacatcagtcgatt 26633684  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| | ||||||||| |||||| |||  ||| || |||||||||  |||| |||||||  | ||||||||||||||    
T  26633683 acaaattcaaccaatgatttggacgtcaatgttgcagatccggaagcatgaatatttctgtgacttaggttttatcatattaaatataggcattttaccg 26633584  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||||||||| ||| | |||||| |||||||| ||||    
T  26633583 ttgtatgctattagcttagatgttgtgagtttgttcgcag 26633544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 27651934 - 27652179
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtt---tgatttatcgtcttat----tgcggtgttcgtttgattcctattgaaagatcaatttca 96  Q
    |||||| ||||||||||||||| |||||||||||||||   ||||||  | || | |    ||||||||||||||| ||| |||||||||||||  || |    
T  27651934 agtgcaacgttgtgttgttcgtcgtcttgtgcggtgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttta 27652033  T
Q  97 gtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcat 196  Q
    | |||| | ||||||||| |||||||||||  || ||||||||||| | |||| ||||||||   ||||  ||||| || | |||||||||||||| |||    
T  27652034 gacaatcacaaattcaatcaatgatttgggtatcaacgttgcagatccagaagcatgggtattctagtgt-ttagatttcatcatattatttgtagacat 27652132  T
Q  197 tttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||| ||||||||||||||||||||| ||||||| |||||||| ||||    
T  27652133 tttgccgttgtatgctattaacttgagtgttgtgagtttgttcgcag 27652179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 43510194 - 43510432
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||| || || ||||||||||| |||||||||   || || | |||||||| |||  |||||| |||||||||| |  ||||||| ||    
T  43510194 agtgcggcgttgtgttatttgtcgtcttgtgcggcgtttgatttcgtgttttgtcgcggtgtttgttcaattcctcttgaaagatctacatcagtca-tt 43510292  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||| || ||||||||||| |||| | ||||||||| | |||| |||||||| || ||||||||   |||| |||||||||||||||||||||  ||    
T  43510293 acaaattaaactaatgatttggacgtcaatgttgcagatcctgaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgtcg 43510392  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||  ||||||||||||| ||| |||||||| ||||    
T  43510393 ttgtatgtcattaacttgggtgctgtgagtttgttcgcag 43510432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 11 - 247
Target Start/End: Original strand, 9178357 - 9178593
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaatt 110  Q
    |||||| ||||||||  ||||||| || |||||||||  |||||| | ||| |||||||||  |||||||||||||||| |  ||| ||||||| ||||     
T  9178357 cgttgtattgttcgtcatcttgtgtggcgtttgatttcgcgtcttgtcgcgttgttcgtttagttcctattgaaagatcgacatcaatcaattacaaatc 9178456  T
Q  111 caattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatg 210  Q
    |||| ||| ||||| || || |||||||||||  ||||| |   |||| |||| ||||| |  |||| |||||||||||||||||||||  |||||||||    
T  9178457 caatcaataatttgagcatcaacgttgcagatctggaagcaaaagtatttcagagacttcggttttatcatattatttgtaggcattttgtcgttgtatg 9178556  T
Q  211 ctattaacttgggtgttgttagtttgtttgcagtttc 247  Q
    ||||||||||| |||  || |||||||| ||||||||    
T  9178557 ctattaacttgtgtgacgtgagtttgttcgcagtttc 9178593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 28857396 - 28857637
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtca 100  Q
    ||||| ||||||||||||||||||||||||||||   |||||||||   |||||  |||||||||||||||| ||| |||||||||||||  ||||||||    
T  28857396 agtgcggcgttgtgttgttcgttgtcttgtgcggcgttgtttgattccgcgtctagttgcggtgttcgtttgtttcatattgaaagatcagcttcagtca 28857495  T
Q  101 attataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatttta 200  Q
    || | | |||||||| ||||||||| || | ||||| ||||| |||||| |||| | | |  |||| ||||| || | |||||| |||||||| |||||     
T  28857496 atcacatattcaattgatgatttggacgccaacgtttcagatccggaagcatggttttct-ggtgatttagatttcatcatattttttgtaggtattttg 28857594  T
Q  201 ccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    || || ||||||||||||||||  | ||| |||||||| ||||    
T  28857595 cccttatatgctattaacttggcagctgtgagtttgttcgcag 28857637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 239
Target Start/End: Complemental strand, 26091022 - 26090787
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttat--cgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataa 107  Q
    ||||| |||||||||  || |||||||| ||||||||| |  ||||||||  ||||||||||||  ||| | |||||||||| |  ||||||||||||||    
T  26091022 gcgttctgttgttcgccgttttgtgcggcgtttgattttttgcgtcttatcacggtgttcgtttagttcatcttgaaagatcgacatcagtcaattataa 26090923  T
Q  108 attcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaa----tttaccatattatttgtaggcattttaccg 203  Q
    |||||| |||||||||||||||| |||||||| ||||||||| || ||||| || ||||||||||     |||| ||||||||||| ||  || ||  ||    
T  26090922 attcaactaatgatttgggcgtcaacgttgcaaattcggaagcattggtatttcggtgacttagatatattttatcatattatttgcagatatattgtcg 26090823  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgttt 239  Q
    |||||||||||||| |||| || ||| | |||||||    
T  26090822 ttgtatgctattaatttggatgctgtgaatttgttt 26090787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 238
Target Start/End: Original strand, 36161713 - 36161942
Alignment:
Q  12 gttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaa 108  Q
    ||||| |||||||||||||||||||    ||||||||||  ||| || |||||||||||||||  ||| ||| ||||||| | ||||||||||| | | |    
T  36161713 gttgttttgttcgttgtcttgtgcgtcgttgtttgattttacgttttgttgcggtgttcgttttgttcatatcgaaagattagtttcagtcaatcacata 36161812  T
Q  109 ttcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgta 208  Q
    |||||| |||||||||| || | ||||| ||||| || ||  ||| |||| |  |||| ||||| |||| ||||||||||||||||||||   |||| ||    
T  36161813 ttcaatcaatgatttggacgccaacgttacagatccgaaaacatgagtattttcgtgatttagattttatcatattatttgtaggcatttggtcgttata 36161912  T
Q  209 tgctattaacttgggtgttgttagtttgtt 238  Q
    || |||||||||||||||||| ||||||||    
T  36161913 tgttattaacttgggtgttgtgagtttgtt 36161942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 11 - 249
Target Start/End: Original strand, 44596668 - 44596902
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaatt 110  Q
    |||||| |||||||| ||||||||||| |||||||||  |||||| | || | ||||||||  |||||||| ||| ||| |  ||||||| ||| |||||    
T  44596668 cgttgtattgttcgtcgtcttgtgcggcgtttgatttg-cgtcttgtggcagcgttcgtttagttcctattaaaaaatctacatcagtca-ttacaaatt 44596765  T
Q  111 caattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatg 210  Q
    |||| |||||||  | |||| ||||||| |||||| ||  || ||||| ||  ||| ||| | |||| ||||||||||||||  ||||||||||||||||    
T  44596766 caatcaatgatt--gacgtcaacgttgctgattcgaaaacataggtatttcgatgatttacattttatcatattatttgtagctattttaccgttgtatg 44596863  T
Q  211 ctattaacttgggtgttgttagtttgtttgcagtttcgc 249  Q
    ||||||||||||||| ||| |||||||| |||| |||||    
T  44596864 ctattaacttgggtgctgtgagtttgttcgcagattcgc 44596902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 243
Target Start/End: Original strand, 43095634 - 43095864
Alignment:
Q  13 ttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattca 112  Q
    |||||||||| || ||||||| |||||||||||||  |||||| |  || ||||| |||  ||||||||| |||||| |  ||||||||||| || || |    
T  43095634 ttgtgttgttagtcgtcttgtacggtgtttgatttcgcgtcttgtcacgatgttcatttagttcctattggaagatcgacatcagtcaattacaagttaa 43095733  T
Q  113 attaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgct 212  Q
    || |||||||||| |||| ||  ||||||| |||||| ||| | || ||| ||||||||| |||| ||||| ||||||||| |||||   ||||||||||    
T  43095734 atcaatgatttggccgtcaacagtgcagatccggaagcatgagaatttcactgacttagattttatcatatcatttgtaggtattttgtagttgtatgct 43095833  T
Q  213 attaacttgggtgttgttagtttgtttgcag 243  Q
    ||||| |||| || ||| |||||||| ||||    
T  43095834 attaatttggatgatgtgagtttgttcgcag 43095864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 51888329 - 51888089
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcag 97  Q
    |||||||| |||||||||||||| | ||||| ||||    ||||||||||  | |||| |||||||||||||||| ||| |||||||||||||| ||||     
T  51888329 ctgagtgcggcgttgtgttgttcatcgtcttatgcgacgttgtttgatttcgcatcttgttgcggtgttcgtttggttcatattgaaagatcaacttcaa 51888230  T
Q  98 tcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatt 197  Q
    ||||| | ||||| ||| |||||||| |  ||  |||||||| ||  | ||| ||| ||||    |||| ||||| |||| |||||||||||||||| ||    
T  51888229 tcaatcacaaatttaatcaatgattttgatgttaacgttgcatatctgaaagcatgagtattctggtgatttagattttatcatattatttgtaggcgtt 51888130  T
Q  198 ttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    || || ||| ||||||||||||| |||||||| ||||||||    
T  51888129 ttgccattgcatgctattaacttaggtgttgtgagtttgtt 51888089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 36194760 - 36194944
Alignment:
Q  58 tgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggta 157  Q
    ||||||||||||||| ||| |||||||||||||  ||||  |||| | ||||||||| |||||||||  | || | ||||||||| | |||  |||||||    
T  36194760 tgcggtgttcgtttggttcgtattgaaagatcagcttcaaacaatcacaaattcaatcaatgatttga-catcaaagttgcagatccagaaacatgggta 36194858  T
Q  158 tgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |    |||| ||||| || | ||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||| ||||    
T  36194859 ttctggtgatttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttggatgttgtgagtttgttcgcag 36194944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 4 - 209
Target Start/End: Complemental strand, 4142867 - 4142659
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtg---tttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtca 100  Q
    ||||| |||||||||||||||| ||||||||||| |   ||||||||   || || | |||||||| |||  |||||| |||||||||| |  |||||||    
T  4142867 agtgcggcgttgtgttgttcgtcgtcttgtgcggcggcgtttgatttcgtgttttgtcgcggtgtttgttcaattcctcttgaaagatctacatcagtca 4142768  T
Q  101 attataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatttta 200  Q
    |||| ||||||||  |||||||||| |||| ||||||||||| | |||  ||| |||| || ||||||||   |||| |||||||||||||| ||||||     
T  4142767 attacaaattcaaccaatgatttggacgtcaacgttgcagatccagaaacatgagtatttcggtgacttaagttttatcatattatttgtagacattttg 4142668  T
Q  201 ccgttgtat 209  Q
    |||||||||    
T  4142667 ccgttgtat 4142659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 78 - 243
Target Start/End: Complemental strand, 29960987 - 29960822
Alignment:
Q  78 tattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaattta 177  Q
    |||||||||||| |  ||| ||||||||||||||||   ||||||| ||| || ||||||||||| |||||  ||   ||| | ||||| ||||| ||||    
T  29960987 tattgaaagatctacatcaatcaattataaattcaaccgatgattttggcatcaacgttgcagatccggaaacataaatattttagtgatttagatttta 29960888  T
Q  178 ccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
     |||| |||||||||||||||| |||||||||||| |||||||||||| ||| |||||||| ||||    
T  29960887 tcatactatttgtaggcattttgccgttgtatgcttttaacttgggtgctgtgagtttgttcgcag 29960822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 94 - 243
Target Start/End: Complemental strand, 47320434 - 47320285
Alignment:
Q  94 tcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtagg 193  Q
    ||||||||| | | ||||||| |||||||||| |||| ||||||||||| | |||| | | ||||    |||| ||||| | || |||||||||||||||    
T  47320434 tcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatattatttgtagg 47320335  T
Q  194 cattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||| ||||||||||||||||||||||||| ||| |||||||| ||||    
T  47320334 cattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcag 47320285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 106 - 226
Target Start/End: Original strand, 45418611 - 45418731
Alignment:
Q  106 aaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgtt 205  Q
    ||||||||| |||||||||||| || ||||||||||| || ||| |   |||| || |||||||||| |||| |||||||||||||||||||||  ||||    
T  45418611 aaattcaatcaatgatttgggcatcaacgttgcagatccgaaagcactagtatttcggtgacttagattttatcatattatttgtaggcattttgtcgtt 45418710  T
Q  206 gtatgctattaacttgggtgt 226  Q
    ||||||||||||| |||||||    
T  45418711 gtatgctattaacatgggtgt 45418731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 38166343 - 38166199
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtca 100  Q
    |||||||| |||||||||||||||||||||| |||| ||||||||||  | |||||||| |||||| ||||||||  |||||||||||||| || ||| |    
T  38166343 ctgagtgcggcgttgtgttgttcgttgtctt-tgcgctgtttgatttcacatcttattgtggtgtttgtttgatttatattgaaagatcaactt-agtta 38166246  T
Q  101 attataaattcaattaatgatttgggcgtcgacgttgcagattcgga 147  Q
    || ||| ||||||  |||||||||| | || ||||||||||| ||||    
T  38166245 atcatagattcaagcaatgatttggacatcaacgttgcagatccgga 38166199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 210
Target Start/End: Complemental strand, 10258999 - 10258802
Alignment:
Q  13 ttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattca 112  Q
    |||||||||| || ||||| || | ||||||||||  ||||||   |||||||||||||  ||| | |||||||||| |  | ||||||||| |||||||    
T  10258999 ttgtgttgttagtggtcttatgtgatgtttgatttcgcgtcttgacgcggtgttcgtttagttcatgttgaaagatcgacattagtcaattacaaattca 10258900  T
Q  113 attaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatg 210  Q
    || ||||||||||||| | |||||||| |  |||||| |||  ||| |  |||||||||| |||| |||||||||||||| |||||| | ||||||||    
T  10258899 atcaatgatttgggcgccaacgttgcatacccggaagcatgaatattttggtgacttagattttatcatattatttgtagacattttgctgttgtatg 10258802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 222
Target Start/End: Complemental strand, 2069658 - 2069475
Alignment:
Q  38 tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttg 137  Q
    ||||||||||  | |||| ||||||| ||| |||| ||| |||||||| |||| ||| ||||||| ||| ||||||| ||| ||||||| ||| ||||||    
T  2069658 tgtttgatttcgcatcttgttgcggtattcatttggttcatattgaaatatcagttttagtcaatcatagattcaatcaattatttgggtgtcaacgttg 2069559  T
Q  138 cagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgg 222  Q
    || |||  |||| ||||||||    |||| ||| | |||| ||||||||||||| ||||||||||||| |||| |||||||||||    
T  2069558 caaatttagaagcatgggtattatggtgatttatattttatcatattatttgtatgcattttaccgtt-tatgttattaacttgg 2069475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 1621613 - 1621384
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttat----tgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattata 106  Q
    ||||||||||| ||| |||||||||| ||||||||||  | || | |    || |||||||||||| ||| |||||||||||||  ||||  |||| |||    
T  1621613 cgttgtgttgtccgtcgtcttgtgcgttgtttgatttcgcatcctttgttgtgtggtgttcgtttggttcgtattgaaagatcagcttcaaacaatcata 1621514  T
Q  107 aattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttg 206  Q
    |||||||| ||||||||||||||  ||||||||||| | |||    ||||||    |||| ||||| || | |||||||||||||| |||||  ||||||    
T  1621513 aattcaatcaatgatttgggcgt-aacgttgcagatccagaa----gggtattctggtgatttagatttcatcatattatttgtagacattt--ccgttg 1621421  T
Q  207 tatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||| |||||||||| |||||| |||||||| ||||    
T  1621420 tatgcaattaacttggatgttgtgagtttgttcgcag 1621384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 109 - 219
Target Start/End: Complemental strand, 29120386 - 29120276
Alignment:
Q  109 ttcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgta 208  Q
    ||||||| || ||||||||||| || ||||||||  ||||| ||| |||| || || ||||||| |||| |||||||||||||||||||||  |||||||    
T  29120386 ttcaattgataatttgggcgtcaacattgcagatctggaagcatgagtatttcggtaacttagattttatcatattatttgtaggcattttgtcgttgta 29120287  T
Q  209 tgctattaact 219  Q
    |||||||||||    
T  29120286 tgctattaact 29120276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 239
Target Start/End: Original strand, 9048708 - 9048896
Alignment:
Q  51 gtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagt 150  Q
    ||||| |||||||||||||||| || || ||||||||| |  |||||| ||| | ||||||||| ||||||||| ||||| |||||||| ||  | ||      
T  9048708 gtcttgttgcggtgttcgtttggtttcttttgaaagataagcttcagttaatcacaaattcaatcaatgatttgagcgtcaacgttgcaaatctgaaaac 9048807  T
Q  151 atgggtatgtcag-tgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgttt 239  Q
    |||||||| || | ||| ||| | |||| |||||||||||||||||||||  |||  | |||||| |||||||||||||| |||||||||    
T  9048808 atgggtat-tctgatgatttaaattttatcatattatttgtaggcattttgtcgtcatgtgctataaacttgggtgttgtgagtttgttt 9048896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 37465638 - 37465715
Alignment:
Q  163 gtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttg 240  Q
    |||| ||||| |||| ||||||||||||| |||||||  |||||||||||||||||||||||||||| ||||||||||    
T  37465638 gtgatttagattttatcatattatttgtaagcattttgtcgttgtatgctattaacttgggtgttgtgagtttgtttg 37465715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 130
Target Start/End: Original strand, 4937864 - 4937956
Alignment:
Q  38 tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtc 130  Q
    ||||||||||  | |||| |||||| ||||||||||||  |||||||||||||| ||||||| |||||||||||||| |||||||| ||||||    
T  4937864 tgtttgattttacatcttgttgcggagttcgtttgatttttattgaaagatcaacttcagtcgattataaattcaatcaatgatttaggcgtc 4937956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 225
Target Start/End: Complemental strand, 6155280 - 6155114
Alignment:
Q  62 gtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagta---tgggtat 158  Q
    ||||||||||||||| ||||||||||||| ||||||||||| | |  ||||||  ||||||| | |||  ||||||||||| |||||| |   | | |||    
T  6155280 gtgttcgtttgattcatattgaaagatcagtttcagtcaatcacatgttcaatcgatgatttagacgtaaacgttgcagatccggaagcaacatagatat 6155181  T
Q  159 gtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtg 225  Q
        |||| ||||| | || |||||||||||||||||||||  ||||||||||||||||||||||||    
T  6155180 tctggtgatttagattctatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtg 6155114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 9643389 - 9643505
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataa 107  Q
    ||||||||||||||| |||||| |||    |||||||||| || |||| |||| ||||||||||| ||| |||| ||||||||| |||||||||| | |     
T  9643389 cgttgtgttgttcgtcgtcttgagcgacgttgtttgatttctcatcttgttgcagtgttcgtttggttcatattaaaagatcaacttcagtcaatcacat 9643488  T
Q  108 attcaattaatgatttg 124  Q
    |||||||||||||||||    
T  9643489 attcaattaatgatttg 9643505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 38 - 199
Target Start/End: Complemental strand, 22038880 - 22038719
Alignment:
Q  38 tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttg 137  Q
    ||||||||||  |||||| ||| |||| ||||||| ||| |||||||||||| | |||||||||| | | ||||||| |||||||| | | || | ||||    
T  22038880 tgtttgatttcgcgtcttgttgtggtgctcgtttggttcatattgaaagatctacttcagtcaatcacatattcaataaatgattttgacatcaatgttg 22038781  T
Q  138 cagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatttt 199  Q
    ||||| | |||| ||| |||| || |||| ||| | |||| |||| ||||||||||||||||    
T  22038780 cagatccagaagcatgtgtatttcggtgatttaaattttatcataatatttgtaggcatttt 22038719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 5119345 - 5119421
Alignment:
Q  13 ttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    ||||||||||||||||||| ||||| |||||||||   ||||||| |||||||||||||  ||||||||||||||||    
T  5119345 ttgtgttgttcgttgtcttttgcggcgtttgattttgtgtcttatcgcggtgttcgtttagttcctattgaaagatc 5119421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 57 - 243
Target Start/End: Original strand, 9713962 - 9714146
Alignment:
Q  57 ttgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggt 156  Q
    |||||| ||||||||  ||| ||||| |||||||  ||||  |||| | ||||||||| || |||||||||||| |||||||||||  |||||  |   |    
T  9713962 ttgcggagttcgtttctttcatattggaagatcagcttcaaacaatcacaaattcaatcaacgatttgggcgtcaacgttgcagatctggaagcgta--t 9714059  T
Q  157 atgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||   ||||| ||||| |||| |||||||||||||||||||||  | ||||||| | |||||||| ||||||| |||||||| ||||    
T  9714060 attctagtgaattagattttatcatattatttgtaggcattttgtcattgtatgttgttaacttgagtgttgtgagtttgttcgcag 9714146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 243
Target Start/End: Complemental strand, 48257628 - 48257505
Alignment:
Q  120 atttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaact 219  Q
    |||||| |||| ||||| ||||| || ||  |||||||| || |||||||    |||| ||||||||||||||| ||||| |||||||||||||||||||    
T  48257628 atttggacgtcaacgttacagatccgaaaacatgggtatttcggtgacttgagttttatcatattatttgtaggtattttgccgttgtatgctattaact 48257529  T
Q  220 tgggtgttgttagtttgtttgcag 243  Q
    ||| | |||| |||||||| ||||    
T  48257528 tggattttgtgagtttgttcgcag 48257505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 868180 - 868260
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatt 93  Q
    |||||||||| |||||||||||   ||||||||||  |||||| ||||||||||| |||||||| ||||||||||||||||    
T  868180 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatcaatt 868260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 22300850 - 22301086
Alignment:
Q  11 cgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataa 107  Q
    ||||||||||||||| |||||||||||   ||||||||||  |||| | |||||||||| ||||   || | |||||||||||  || ||||||| | |     
T  22300850 cgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtcctgttgcggtgtttgtttagctcatcttgaaagatcagctttagtcaatcacag 22300949  T
Q  108 attcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattattt-gtaggcattttaccgttg 206  Q
    |||||||  ||||||||| || ||||||||||||| || ||  ||| |||| |  |||| ||||| || |  ||||| |||  |||| ||||| ||| |     
T  22300950 attcaatcgatgatttggacgccgacgttgcagatccgaaatcatgagtattttggtgatttagatttcattatattttttcataggtattttgccgcta 22301049  T
Q  207 tatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||| |||||| |||||||| ||||    
T  22301050 tatgctattaacttggatgttgtgagtttgttcgcag 22301086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 242
Target Start/End: Complemental strand, 42032536 - 42032403
Alignment:
Q  108 attcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgt 207  Q
    ||||||| ||||||||||| | | |||||| |||| | |||| ||| |||| |  |||| |||||  ||| ||||||||| |||| |||||| |||||||    
T  42032536 attcaataaatgatttgggtgccaacgttgaagatccagaagcatgagtatctt-gtgatttagatgttatcatattattggtagccattttgccgttgt 42032438  T
Q  208 atgctattaacttgggtgttgttagtttgtttgca 242  Q
    ||||||||||||||  |||||| ||||||||||||    
T  42032437 atgctattaacttgaatgttgtgagtttgtttgca 42032403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 58 - 199
Target Start/End: Complemental strand, 33332627 - 33332486
Alignment:
Q  58 tgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggta 157  Q
    ||||||||||||||  ||  |||||||||||||| ||||| |||| | | ||||||| |||||||||| |||| ||||||||||| |  ||| ||||| |    
T  33332627 tgcggtgttcgtttcgtttttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggca 33332528  T
Q  158 tgtcagtgacttagaatttaccatattatttgtaggcatttt 199  Q
    | |   ||| ||||| |||| ||||||||||||| |||||||    
T  33332527 ttttgatgatttagattttatcatattatttgtatgcatttt 33332486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 43853552 - 43853679
Alignment:
Q  116 aatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcag-tgacttagaatttaccatattatttgtaggcattttaccgttgtatgctat 214  Q
    |||||||||  |||| |||||||||||||||||| ||| |||| | || ||| ||||| |||| ||||||||||||  |||||||   |||||||| |||    
T  43853552 aatgatttgtacgtcaacgttgcagattcggaagcatgcgtat-taagatgatttagattttatcatattatttgtcagcattttgttgttgtatgttat 43853650  T
Q  215 taacttgggtgttgttagtttgtttgcag 243  Q
    |||||||| |||||| |||||||| ||||    
T  43853651 taacttggatgttgtgagtttgttcgcag 43853679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 18048885 - 18048990
Alignment:
Q  12 gttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaa 108  Q
    ||||||||||| || |||||||| ||   ||||||||||  || ||| |||||||||||||||||||| ||||||||||| |  |||||||||| ||| |    
T  18048885 gttgtgttgtttgtcgtcttgtgtggcgttgtttgattttgcgccttgttgcggtgttcgtttgattcatattgaaagataagcttcagtcaatcataga 18048984  T
Q  109 ttcaat 114  Q
    ||||||    
T  18048985 ttcaat 18048990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 7008945 - 7008871
Alignment:
Q  160 tcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtt 234  Q
    ||||||| ||| | |||| |||||||||||| | |||||| |||||||||||||||||||| |||||||| ||||    
T  7008945 tcagtgatttaaattttatcatattatttgtggacattttgccgttgtatgctattaacttaggtgttgtgagtt 7008871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 36184698 - 36184764
Alignment:
Q  174 tttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttg 240  Q
    |||| |||| ||||| ||||||||||  ||||||||||||||||||||| |||||| ||||||||||    
T  36184698 tttatcatactatttctaggcattttgtcgttgtatgctattaacttggatgttgtgagtttgtttg 36184764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 53616721 - 53616641
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatt 93  Q
    |||||||||| |||||||||||   ||||||||||  ||||||  |||||||||| |||||||| ||||||||||||||||    
T  53616721 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcaatt 53616641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 7393263 - 7393365
Alignment:
Q  3 gagtgcagcgttgtgttgttcgttgtcttgtgcgg----tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagt 98  Q
    |||||||| ||||||||| |||| ||||||| ||     ||||||||||  | |||| ||| ||||||||||||||||||||||||||||||| || |||    
T  7393263 gagtgcagtgttgtgttgctcgtcgtcttgttcgacatttgtttgatttcacatcttgttgtggtgttcgtttgattcctattgaaagatcaacttaagt 7393362  T
Q  99 caa 101  Q
    |||    
T  7393363 caa 7393365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 11299952 - 11299883
Alignment:
Q  174 tttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||| ||||||||| |||||||||||  |||| |||| |||||||||||||||||| |||||||| ||||    
T  11299952 tttatcatattattcgtaggcattttggcgttttatgttattaacttgggtgttgtgagtttgttcgcag 11299883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 22305573 - 22305516
Alignment:
Q  164 tgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttg 221  Q
    ||||||||| |||| ||||||||||||||| |||||  ||||||||||||||||||||    
T  22305573 tgacttagattttatcatattatttgtaggtattttgtcgttgtatgctattaacttg 22305516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 55227971 - 55228073
Alignment:
Q  3 gagtgcagcgttgtgttgttcgttgtcttgtgc---ggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtc 99  Q
    ||||||||| |||||||||| || |||||||||   | |||| |||||  ||| |||||||||||||||||||||||||||| | | ||||| ||| |||    
T  55227971 gagtgcagcattgtgttgtttgtcgtcttgtgcaacgttgttagattttgcgttttattgcggtgttcgtttgattcctattaacaaatcaacttcggtc 55228070  T
Q  100 aat 102  Q
    |||    
T  55228071 aat 55228073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 242
Target Start/End: Original strand, 9643564 - 9643611
Alignment:
Q  195 attttaccgttgtatgctattaacttgggtgttgttagtttgtttgca 242  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||||||    
T  9643564 attttgccgttatatgctattaacttgggtgttgtgagtttgtttgca 9643611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 209
Target Start/End: Complemental strand, 48351264 - 48351093
Alignment:
Q  38 tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttg 137  Q
    ||||||||||  |||||| |  ||||||||||||| ||  |||||||||||||  |||||||||| | | ||||||   ||||||||| ||||  |||||    
T  48351264 tgtttgatttcgcgtcttgtcacggtgttcgtttggtttatattgaaagatcagcttcagtcaatcacatattcaacctatgatttggacgtccgcgttg 48351165  T
Q  138 cagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    |||||  ||||| ||| ||||  | |||| ||||| | || ||| ||||||||| |||||||  ||||||||    
T  48351164 cagatctggaagcatgagtattacggtgatttagattgtatcatgttatttgtatgcattttgtcgttgtat 48351093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 4643876 - 4643952
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||   ||||||||||  ||||||  |||||||||| |||||||| ||||||||||||    
T  4643876 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagatc 4643952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 10389825 - 10389753
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaa 85  Q
    |||||||||| |||||||||||   ||||||||||  |||||| ||||||||||| |||||||| ||||||||    
T  10389825 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattgaaa 10389753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 25273901 - 25273977
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||   ||||||||||  ||||||  |||||||||| |||||||| ||||||||||||    
T  25273901 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 25273977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 47417680 - 47417756
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||   ||||||||||  ||||||  |||||||||| |||||||| ||||||||||||    
T  47417680 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 47417756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 56194619 - 56194695
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||   |||||| |||  |||||| ||||||||||| ||| |||||||||||||||||    
T  56194619 tgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatc 56194695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 29965653 - 29965728
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagat 88  Q
    |||||||||| |||||||||||   ||||||||||  ||||||  |||||||||| |||||||| |||||||||||    
T  29965653 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagat 29965728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 213
Target Start/End: Original strand, 36700377 - 36700482
Alignment:
Q  108 attcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgt 207  Q
    ||||||| ||||||||||||||| |||||||| ||  |||||  ||||||| ||  ||||||| | |||| ||||||||||  | |||||||  ||||||    
T  36700377 attcaatcaatgatttgggcgtcaacgttgcaaatctggaagcgtgggtatttcgatgacttaaattttatcatattatttaaaagcattttgtcgttgt 36700476  T
Q  208 atgcta 213  Q
    ||||||    
T  36700477 atgcta 36700482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 91
Target Start/End: Original strand, 45418540 - 45418609
Alignment:
Q  22 tcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaa 91  Q
    ||||||||||||| |||||||||||   |||||||| ||||||||| |||  || |||||||||||||||    
T  45418540 tcgttgtcttgtgtggtgtttgattctgcgtcttatcgcggtgttcatttagttgctattgaaagatcaa 45418609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 51318003 - 51318078
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagat 88  Q
    |||||||||| |||||||||||   ||||||||||  |||||| ||||||||||  |||||||| |||||||||||    
T  51318003 tgttgttcgtcgtcttgtgcggcattgtttgatttcccgtcttcttgcggtgttaatttgattcatattgaaagat 51318078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 11300095 - 11299980
Alignment:
Q  12 gttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattc 111  Q
    |||||||||||||| |||||||||   |||||||||  |||||| | ||||||||| ||   || ||||||||||||||    ||||| |||| ||||||    
T  11300095 gttgtgttgttcgtcgtcttgtgcaacgtttgatttcgcgtcttgtcgcggtgttcattcattttctattgaaagatca---gcagtcgattacaaattc 11299999  T
Q  112 aattaatgatttgggcgtc 130  Q
    ||  |||||||||||||||    
T  11299998 aaacaatgatttgggcgtc 11299980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 18138986 - 18138908
Alignment:
Q  14 tgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||||| |||||||||||   ||||||||||  | |||| |||| |||||| ||||||| |||||||||||||    
T  18138986 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttgttgcagtgttcatttgatttctattgaaagatc 18138908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 35395788 - 35395690
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgt---gcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttca 96  Q
    |||||||| |||||||||||||||| |||||||    || |||||||| ||  ||||| | |||| ||||||||| ||| |||||||||||||| ||||    
T  35395788 ctgagtgcggcgttgtgttgttcgtcgtcttgttcgacgttgtttgatctagtgtcttgtcgcggcgttcgtttgtttcttattgaaagatcaacttca 35395690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 49126199 - 49126121
Alignment:
Q  14 tgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||||| |||||||||||   ||||||||||  | |||| |||| |||||| ||||||| |||||||||||||    
T  49126199 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttgttgcagtgttcatttgatttctattgaaagatc 49126121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 2624512 - 2624589
Alignment:
Q  14 tgtgttgttcgttgtcttgtgcggtgt---ttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagat 88  Q
    |||||||||||| ||||||||||| ||   |||||||  |||||| ||||||||||  |||||||| |||||||||||    
T  2624512 tgtgttgttcgtcgtcttgtgcggcgtagtttgatttcccgtcttgttgcggtgtttatttgattcatattgaaagat 2624589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 45367058 - 45367113
Alignment:
Q  68 gtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgattt 123  Q
    ||||||||| |||| |||||||||||||||||||| | ||||| ||||||| ||||    
T  45367058 gtttgattcatattaaaagatcaatttcagtcaatcacaaatttaattaataattt 45367113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 47158401 - 47158456
Alignment:
Q  183 ttatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    ||||||||| ||| |||| ||||||||||||||||||||| || ||| ||||||||    
T  47158401 ttatttgtatgcactttatcgttgtatgctattaacttggatgatgtgagtttgtt 47158456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 9528948 - 9528872
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||   ||||||||||  ||||||  |||| ||||| |||||||| ||||||||||||    
T  9528948 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcgatgttcatttgattcatattgaaagatc 9528872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 20569273 - 20569349
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| ||||| |||||   ||||||||||  ||||||  |||||||||| |||||||| ||||||||||||    
T  20569273 tgttgttcgtcgtcttctgcggggttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 20569349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 35261207 - 35261287
Alignment:
Q  14 tgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaa 91  Q
    ||||||||| || ||||| |||||   ||||||||||  |||||| ||||||||||| |||||||| |||| |||||||||    
T  35261207 tgtgttgtttgtcgtcttctgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattaaaagatcaa 35261287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 37683881 - 37683977
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcg-tttgattcctattgaaagatcaatt 93  Q
    |||||||| |||||||||||||| | ||||||||  |   ||||||||||  |||||| |||||||||||| |||| || |||||||||||| ||||    
T  37683881 ctgagtgcggcgttgtgttgttcatcgtcttgtgtagagttgtttgatttcgcgtcttgttgcggtgttcgttttggtttctattgaaagattaatt 37683977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 43154085 - 43154009
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||| ||   ||||||||||  ||||||  |||||||||| |||||||| ||||||||||||    
T  43154085 tgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 43154009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 43444411 - 43444487
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| |||||||||||   ||||||||||  |||||   |||||||||| |||||||| ||||||||||||    
T  43444411 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtctacgtgcggtgttcatttgattcatattgaaagatc 43444487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 49410241 - 49410317
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| ||||||||| |   ||||||||||  ||||||  |||||||||| |||||||| ||||||||||||    
T  49410241 tgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 49410317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 52933902 - 52933828
Alignment:
Q  163 gtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgt 237  Q
    |||| ||||| |||| ||||||||||||||| ||||| |  ||||||| |||||||||| ||| ||| |||||||    
T  52933902 gtgatttagattttatcatattatttgtaggtattttgcttttgtatgttattaacttgagtgatgtgagtttgt 52933828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 3336230 - 3336152
Alignment:
Q  14 tgtgttgttcgttgtcttgtgcgg----tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagat 88  Q
    |||||||||||| ||| |||||||    ||||||||||  | |||| ||||||||||| |||||||| |||||||||||    
T  3336230 tgtgttgttcgtcgtcctgtgcggacgttgtttgattttccatcttgttgcggtgttcatttgattcatattgaaagat 3336152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 18138824 - 18138767
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||| |||| | ||||| |||||||||||||||| |||||| |||||||| ||||    
T  18138824 tttgtagtcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcag 18138767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 21554725 - 21554684
Alignment:
Q  181 tattatttgtaggcattttaccgttgtatgctattaacttgg 222  Q
    ||||||||||||||||||| || |||| ||||||||||||||    
T  21554725 tattatttgtaggcattttgcccttgtttgctattaacttgg 21554684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 35395597 - 35395528
Alignment:
Q  174 tttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||| |||||||||||| |||||||  ||| |||||||||||||||  ||||||  |||||||| ||||    
T  35395597 tttactatattatttgtatgcattttgtcgtcgtatgctattaactttagtgttgcaagtttgttcgcag 35395528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 44947591 - 44947648
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| | ||||| |||| ||||||||||| |||||| |||||||| ||||    
T  44947591 tttgtaggcattgtgccgttatatgttattaacttggatgttgtgagtttgttcgcag 44947648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 49126037 - 49125980
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||| |||| | ||||| |||||||||||||||| |||||| |||||||| ||||    
T  49126037 tttgtagtcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcag 49125980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 53616560 - 53616503
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| | ||||| |||||||||||||||| || ||| |||||||| ||||    
T  53616560 tttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgcag 53616503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 4644038 - 4644094
Alignment:
Q  187 ttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||||||| | ||||| |||||||||||||||| |||||| || ||||| ||||    
T  4644038 ttgtaggcattatgccgttatatgctattaacttggatgttgtgagcttgttcgcag 4644094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 9145828 - 9145764
Alignment:
Q  179 catattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||| ||| ||||||||||||  |||||||||||||| || |||||||| |||| ||| ||||    
T  9145828 catattgtttataggcattttacttttgtatgctattaatttaggtgttgtgagttcgttcgcag 9145764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 10359458 - 10359406
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||| | ||||| |||||||||||||||| || ||| ||||||||    
T  10359458 tttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgtt 10359406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 14183821 - 14183896
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg--tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| ||||||||||   ||||||||||   |||||  |||||||||| |||||||| ||||||||||||    
T  14183821 tgttgttcgtagtcttgtgcgtgttgtttgattttctgtcttcatgcggtgttcatttgattcatattgaaagatc 14183896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 27593739 - 27593687
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||| ||| | ||||| |||||||||||||||| |||||| ||||||||    
T  27593739 tttgtaggaattatgccgttatatgctattaacttggatgttgtgagtttgtt 27593687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 29966522 - 29966562
Alignment:
Q  203 gttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||||||| |||||| |||||||| ||||    
T  29966522 gttgtatgctattaacttggatgttgtgagtttgttcgcag 29966562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 243
Target Start/End: Original strand, 35261392 - 35261428
Alignment:
Q  207 tatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||| |||||| |||||||||||||    
T  35261392 tatgctattaacttggatgttgtgagtttgtttgcag 35261428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 43153924 - 43153872
Alignment:
Q  186 tttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||| | ||||| |||||| ||||||||| |||||| ||||||||    
T  43153924 tttgtaggcattatgccgttatatgctgttaacttggatgttgtgagtttgtt 43153872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 52204409 - 52204345
Alignment:
Q  38 tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaat 102  Q
    ||||||||||  |||||| || |||||||||||||||| | ||| ||||||| |||||| |||||    
T  52204409 tgtttgattttgcgtcttgttacggtgttcgtttgattaccattaaaagatcgatttcaatcaat 52204345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #111
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 56335737 - 56335809
Alignment:
Q  171 gaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||| |||||||||| ||  ||||||| |||| ||||| |||||| ||| |||||| | |||||||||||    
T  56335737 gaatttatcatattatttataaacattttatcgttttatgcaattaacatggatgttgtgattttgtttgcag 56335809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 12 - 243
Target Start/End: Original strand, 15476 - 15708
Alignment:
Q  12 gttgtgttgttcgttgtcttgtgcggtgttt-gatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaatt 110  Q
    |||||||||||||| ||||||||||| |||| |||||  |||||| | |||||||| |||   |||||||||||||||| |  ||||||||||| |||||    
T  15476 gttgtgttgttcgtcgtcttgtgcggcgttttgatttcgcgtcttgtcgcggtgtttgttcatttcctattgaaagatctacatcagtcaattacaaatt 15575  T
Q  111 caattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatg 210  Q
    |||  |||||||||| |||| || |||||||| |||||| |||| ||| || |||||||||  |||| ||||||||||||||||||||| ||||| ||||    
T  15576 caaccaatgatttggacgtcaacattgcagatccggaagcatggatatttcggtgacttaggttttatcatattatttgtaggcattttgccgttatatg 15675  T
Q  211 ctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||||||||||| ||| |||||||| ||||    
T  15676 ctattaacttgggtgctgtgagtttgttcgcag 15708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 1321 - 1560
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||| |||||||| || |||||||||  |||||| |||||||||||||||  ||||||||||||||||    ||||||||||    
T  1321 agtgcggcgttgtgttgttcgtcgtcttgtgtggcgtttgatttcgcgtcttgttgcggtgttcgtttagttcctattgaaagatcggcatcagtcaatt 1420  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | |||||| |  ||| ||||||||||| ||||||||| |   |||| ||| | || || |||| ||||  |||| ||||||||||||||||||||| |||    
T  1421 acaaattcgaccaataatttgggcgtcaacgttgcagttctagaagcatgtgaatttcggtgatttaggttttatcatattatttgtaggcattttgccg 1520  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    || |||||||||||||||| |||||| |||||||||||||    
T  1521 ttttatgctattaacttggatgttgtgagtttgtttgcag 1560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 7690 - 7926
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtca 100  Q
    |||||||| ||||||||||||| || |||||||| || |||||| ||  ||||||  ||| ||||||||| | || ||||||||||||| | ||||||||    
T  7690 ctgagtgcggcgttgtgttgtttgtcgtcttgtgtggcgtttgaattcgcgtcttgatgcagtgttcgttagttttctattgaaagatccacttcagtca 7789  T
Q  101 attataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatttta 200  Q
    ||||||||||| || ||| ||||||| |||||||||||| || |||||| ||||  |||| ||||| ||| |||||| ||||||||||||||| |||||     
T  7790 attataaattccatcaattatttgggtgtcgacgttgcatatccggaagcatggtaatgt-agtgagttataatttatcatattatttgtagggattttg 7888  T
Q  201 ccgttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |  ||||||| |||||||||||||||||| ||||||||    
T  7889 ctattgtatgttattaacttgggtgttgtgagtttgtt 7926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 4 - 238
Target Start/End: Complemental strand, 32859 - 32625
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||| |||||||||| ||||||||||| |||||||||  |||||| | ||||| || |||   |||||||||||||||| |  ||| ||||||    
T  32859 agtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgcggtatttgttcagttcctattgaaagatctacatcaatcaatt 32760  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  |||||||||| |||| |||||||||||  ||||| ||| |||| || |||||||||| |||| |||||||||||||||||||||  ||    
T  32759 acaaattcaagcaatgatttggacgtcaacgttgcagatctggaagcatgagtatttcggtgacttagattttatcatattatttgtaggcattttgtcg 32660  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtt 238  Q
     ||||| ||||||||||| ||||||| ||||||||    
T  32659 ctgtatactattaacttgagtgttgtgagtttgtt 32625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 238
Target Start/End: Complemental strand, 71976 - 71748
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| |||||||||||||||||||||||||||| |||||||||  ||| || | |||||||| |||   |||||||||||||||| |  | ||||||||    
T  71976 agtgcggcgttgtgttgttcgttgtcttgtgcggagtttgatttcacgttttgtcgcggtgtttgttcagttcctattgaaagatctacattagtcaatt 71877  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  ||||||||||  ||| |||||| |||| |||||| ||||||      ||||||||   |||| ||||||||||||||||||||| |||    
T  71876 acaaattcaaccaatgatttggatgtcaacgttgtagatccggaagcatgggt------gtgacttaagttttatcatattatttgtaggcattttgccg 71783  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||||||||||||| ||| ||||||||    
T  71782 ttgtatgctattaacttgggtgctgtgagtttgtt 71748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 87; Significance: 9e-42; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 10 - 240
Target Start/End: Complemental strand, 71406 - 71176
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    ||||||||||||| || | ||||||| |   |||||||  |||||| | | |||||||||||  |||||||| |||||||    ||||||||||||||||    
T  71406 gcgttgtgttgttagtcgacttgtgcagcagttgatttcgcgtcttgtcgtggtgttcgtttagttcctatttaaagatcggcatcagtcaattataaat 71307  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||| ||||||| ||| ||| ||||||||||| |||||| |||||||| |   ||||||||| ||||  ||||||||||||||||||||   |||||||    
T  71306 tcaatcaatgattggggtgtcaacgttgcagatccggaagcatgggtattttgatgacttagattttattatattatttgtaggcattttgttgttgtat 71207  T
Q  210 gctattaacttgggtgttgttagtttgtttg 240  Q
    |||||||||||||||||||| ||||||||||    
T  71206 gctattaacttgggtgttgtaagtttgtttg 71176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 84; Significance: 6e-40; HSPs: 3)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 10154 - 9915
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| || |||| |||||||| ||||||||||| |||||||||  |||||| | ||||||||| ||| ||||||||||||||||| |  ||  ||||||    
T  10154 agtgcggctttgttttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgtcgcggtgttcatttaattcctattgaaagatcgacatcgatcaatt 10055  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  ||||||||| | ||| ||||||||||| | |||  ||| |||| ||||||| || |  |||| ||||||||||||||||||||| |||    
T  10054 acaaattcaaccaatgatttgagagtcaacgttgcagatccagaaacatgtgtatttcagtgaattgggttttatcatattatttgtaggcatttttccg 9955  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    || ||||||||| ||||||||| ||| |||||||| ||||    
T  9954 ttttatgctattgacttgggtgctgtgagtttgttcgcag 9915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 227
Target Start/End: Original strand, 38053 - 38255
Alignment:
Q  27 gtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttggg 126  Q
    ||||||||||| || ||||||   ||||| || | ||||||||||  ||| |||||||||||  | |||||||||||| |||||||||  ||||||||||    
T  38053 gtcttgtgcggcgtatgatttcatgtcttgttacagtgttcgtttagttcatattgaaagatagacttcagtcaattacaaattcaatcgatgatttggg 38152  T
Q  127 cgtcgacgttgcagattcgg---aagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttggg 223  Q
     ||| || |||  ||| |||   ||  |||||||| || |||||||||| |||| ||||||||||||||| |||||  || | |||||||||||||||||    
T  38153 tgtcaacattgttgatccggcggaaacatgggtatttcggtgacttagattttatcatattatttgtagggatttt-gcgctatatgctattaacttggg 38251  T
Q  224 tgtt 227  Q
    ||||    
T  38252 tgtt 38255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 34704 - 34635
Alignment:
Q  174 tttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||| |||||||||||||||||||||   |||||||||  ||||||| | |||||| |||||||| ||||    
T  34704 tttatcatattatttgtaggcattttgttgttgtatgcctttaacttagatgttgtaagtttgttcgcag 34635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 66154 - 65915
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||||||||| |||||||||| |||||||| || || ||||||  | |||| | | |||||| ||||  || | |||| |||||| |  ||||||||||    
T  66154 agtgcagcgttatgttgttcgtcgtcttgtgtggcgtctgattttgcatcttgtcgtggtgtttgtttagttacaattggaagatcgacatcagtcaatt 66055  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  ||||||||||| | | ||||||||||| |||||| |||||||| || ||||||||   |||| |||||||||||||||||||||  ||    
T  66054 acaaattcaaccaatgatttgggtgccaacgttgcagatccggaagcatgggtatttcggtgacttatgttttatcatattatttgtaggcattttgtcg 65955  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||||||||| ||||| | |||||||| ||||    
T  65954 ttgtatgctattaacttgagtgttatgagtttgttcgcag 65915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 4 - 238
Target Start/End: Original strand, 8489 - 8723
Alignment:
Q  4 agtgcagcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaatt 103  Q
    ||||| ||||||| |||||| | ||||||||| | |||||||||  |||||| | ||| |||||||||  |||||||||||||||| |  ||||||  ||    
T  8489 agtgcggcgttgtattgttcatcgtcttgtgcagcgtttgatttcgcgtcttgtcgcgatgttcgtttagttcctattgaaagatcgacatcagtctctt 8588  T
Q  104 ataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccg 203  Q
    | ||||||||  ||||||||||||||| |||||||||||  ||||| |||||||| || |||| |||   |||| ||||||| | ||||||||||| |||    
T  8589 acaaattcaaccaatgatttgggcgtcaacgttgcagatctggaagaatgggtatttcggtgaattatgttttatcatattaatcgtaggcattttgccg 8688  T
Q  204 ttgtatgctattaacttgggtgttgttagtttgtt 238  Q
    |||||||||||||| ||||||  ||| ||||||||    
T  8689 ttgtatgctattaagttgggtactgtgagtttgtt 8723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 28 - 212
Target Start/End: Complemental strand, 1907 - 1723
Alignment:
Q  28 tcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggc 127  Q
    |||||||||  ||||| |||  |||||| | ||||||||||||| ||| |||||| |||||| |  || || ||||| ||||||||| ||||||||||||    
T  1907 tcttgtgcgtcgtttggtttcgcgtcttgtcgcggtgttcgtttaatttctattggaagatcgacatcggtaaattacaaattcaatcaatgatttgggc 1808  T
Q  128 gtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgct 212  Q
      | ||||||||||| |||||| |||||||| ||  ||||||| | |||| ||||||||||||||||||||||||||||||||||    
T  1807 accaacgttgcagatccggaagcatgggtatttcgatgacttatattttatcatattatttgtaggcattttaccgttgtatgct 1723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 96 - 243
Target Start/End: Original strand, 50845 - 50992
Alignment:
Q  96 agtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggca 195  Q
    ||||||||| ||||||||  |||||||||| |||| ||||||||||| |||||| |||| ||| || ||||||||   |||| |||||||||||||||||    
T  50845 agtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatggatatttcggtgacttaagttttatcatattatttgtaggca 50944  T
Q  196 ttttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    |||| || |||||||||||||||||||||| ||| |||||||| ||||    
T  50945 ttttgccattgtatgctattaacttgggtgctgtgagtttgttcgcag 50992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 238
Target Start/End: Complemental strand, 31380 - 31152
Alignment:
Q  10 gcgttgtgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaat 109  Q
    ||||| ||||||| || ||||||||||  |||||||||  |||||| |  ||||  || |||  |||||||||||||||| |  ||| ||||||| ||||    
T  31380 gcgttatgttgttagtcgtcttgtgcgacgtttgatttcccgtcttgtcacggtaatcatttagttcctattgaaagatcgacatcactcaattacaaat 31281  T
Q  110 tcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtat 209  Q
    ||||| || |||||| || || | ||||||||| |||||| |||||||| || |||||||||| |||| |||||||||| ||||||||||  |||||  |    
T  31280 tcaatcaacgatttgagcatcaatgttgcagatccggaagcatgggtatttcggtgacttagattttatcatattatttataggcattttgtcgttgctt 31181  T
Q  210 gctattaacttgggtgttgttagtttgtt 238  Q
    ||||||| |||||||| ||| ||||||||    
T  31180 gctattagcttgggtgctgtgagtttgtt 31152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 243
Target Start/End: Complemental strand, 2073 - 1846
Alignment:
Q  16 tgttgttcgttgtcttgtgcggtgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaatt 115  Q
    |||||||||| ||||| || || |||||||||  | |||| | ||||||||  |||  |||||||||||||||| |  | ||||||||| ||||||||      
T  2073 tgttgttcgtcgtcttatgtggcgtttgatttcgcatcttgtcgcggtgtttttttagttcctattgaaagatctacattagtcaattacaaattcaacc 1974  T
Q  116 aatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctatt 215  Q
    |||| |||||||||| ||||||||||| || ||  ||  |||| || |||| ||||  |||| ||||||||||||||||||||| | |||||||| ||||    
T  1973 aatggtttgggcgtcaacgttgcagatccgaaaacataagtatttcggtgatttaggttttatcatattatttgtaggcattttgctgttgtatgttatt 1874  T
Q  216 aacttgggtgttgttagtttgtttgcag 243  Q
    |||||||||||| | |||||||| ||||    
T  1873 aacttgggtgttatgagtttgttcgcag 1846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 6001 - 6246
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcag 97  Q
    |||||||||  | |||||||||||| |||||||||||   ||||||||||  ||| || ||||||||||| |||| ||| ||||||||  | || |||||    
T  6001 ctgagtgcaatgatgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtattgttgcggtgttcatttggttcatattgaaatgttaacttcag 6100  T
Q  98 tcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatt 197  Q
    ||||| | | ||||||| ||||||||||  ||| | ||||||||| |||||| ||| ||||    |||| ||||| |||| |||||||||||||| ||||    
T  6101 tcaatcacatattcaatcaatgatttggatgtcaatgttgcagatccggaagcatgtgtattctggtgatttagattttatcatattatttgtagacatt 6200  T
Q  198 ttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||   |||  | ||||||||||||| |||||| |||||||||||||    
T  6201 ttgttgttacaagctattaacttggatgttgtgagtttgtttgcag 6246  T

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Target: scaffold0009 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 58164 - 57961
Alignment:
Q  40 tttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgca 139  Q
    ||||||||  |||||| |||||||||| ||||| ||| || ||||||||||  |||||||||| | | |||||||  ||||||||| |||| || |||||    
T  58164 tttgattttgcgtcttgttgcggtgtttgtttgtttcatactgaaagatcagcttcagtcaatcacagattcaatcgatgatttggacgtcaacattgca 58065  T
Q  140 gattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgttt 239  Q
    ||| |||||| ||| ||||    |||| ||||| || | |||||| |||||||||||||| ||||| |||||||||||||||| || ||| ||||||||     
T  58064 gatccggaagcatgagtattctggtgatttagatttcatcatattttttgtaggcattttgccgttatatgctattaacttggatgctgtgagtttgttc 57965  T
Q  240 gcag 243  Q
    ||||    
T  57964 gcag 57961  T

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Target: scaffold0039 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 93077 - 93305
Alignment:
Q  1 ctgagtgcagcgttgtgttgttcgttgtcttgtgcgg---tgtttgat-ttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttca 96  Q
    |||||||| ||||||||||||| ||||||||||||||   |||||||| ||   ||||| ||| |||||||||||| ||| ||||||||||||  |||||    
T  93077 ctgagtgctgcgttgtgttgtttgttgtcttgtgcggcgttgtttgatattcgtgtcttgttgtggtgttcgtttggttcatattgaaagatcggtttca 93176  T
Q  97 gtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcat 196  Q
     ||||| | | ||| ||| ||||||| || |||| ||||||||||| | ||| |||||||||    |||| ||| | |||| |||||| |||||||||||    
T  93177 ctcaatcacatattgaatcaatgattaggacgtcaacgttgcagatccagaaatatgggtattctggtgatttaaattttatcatattgtttgtaggcat 93276  T
Q  197 tttaccgttgtatgctattaacttgggtg 225  Q
    |||   ||||| |||||||||||||||||    
T  93277 tttgttgttgtgtgctattaacttgggtg 93305  T

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Target: scaffold0888 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 62 - 243
Target Start/End: Complemental strand, 1732 - 1551
Alignment:
Q  62 gtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtc 161  Q
    ||||||||||| ||| |||||||||||||| ||||| |||| | ||||||||| |||||||||||  || |||| | |||| | |||  ||||||||       
T  1732 gtgttcgtttggttcgtattgaaagatcaacttcagacaatcacaaattcaatcaatgatttgggtatcaacgtagtagatccagaaacatgggtattct 1633  T
Q  162 agtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
     |||| ||||| |||| |||||||||||||||||||||| |||| ||||||||||| || | || ||| |||||||| ||||    
T  1632 ggtgatttagattttatcatattatttgtaggcattttatcgttatatgctattaattttgatgatgtgagtttgttcgcag 1551  T

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Target: scaffold0128 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 238
Target Start/End: Original strand, 36898 - 37037
Alignment:
Q  100 aattataaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcatttt 199  Q
    ||||| ||||||||| ||||||||||||||| | |||||  ||  ||||| |||||||| ||||||| ||||| |||| ||||||||||||||| |||||    
T  36898 aattacaaattcaatcaatgatttgggcgtcaatgttgctaatctggaagcatgggtatttcagtgatttagattttatcatattatttgtaggtatttt 36997  T
Q  200 accgttgtatgctattaactt-gggtgttgttagtttgtt 238  Q
       ||| |||||||||||||| ||||||||| ||||||||    
T  36998 gatgttttatgctattaacttggggtgttgtgagtttgtt 37037  T

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Target: scaffold0042 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 158
Target Start/End: Complemental strand, 92574 - 92454
Alignment:
Q  38 tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttgggcgtcgacgttg 137  Q
    ||||||||||  |||||| ||| |||||||||||| ||| ||||||||||||||||| ||| ||| | | ||||||| |||||||||| |||| ||||||    
T  92574 tgtttgatttcacgtcttgttgtggtgttcgtttggttcatattgaaagatcaattttagtaaatcacagattcaatcaatgatttggacgtcaacgttg 92475  T
Q  138 cagattcggaagtatgggtat 158  Q
     |||| | |||| ||||||||    
T  92474 tagatccagaagcatgggtat 92454  T

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Target: scaffold0219 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 238
Target Start/End: Complemental strand, 14880 - 14749
Alignment:
Q  106 aaattcaattaatgatttgggcgtcgacgttgcagattcggaagtatgggtatgtcagtgacttagaatttaccatattatttgtaggcattttaccgtt 205  Q
    ||||||||| |||||||| ||  || || |||||||| |||||  ||| |||| ||  ||||||||| |||| ||||||||||||| ||||||| |  ||    
T  14880 aaattcaatcaatgatttaggaatcaacattgcagatccggaaacatgagtatttcgatgacttaga-tttatcatattatttgtatgcattttgctatt 14782  T
Q  206 gtatgctattaacttgggtgttgttagtttgtt 238  Q
     ||||||||||||||||||| ||| ||||||||    
T  14781 atatgctattaacttgggtgctgtgagtttgtt 14749  T

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Target: scaffold0426 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 6311 - 6387
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||| ||||||| |||   ||||||||||  |||||| ||||||||||| |||||||| ||||||||||||    
T  6311 tgttgttcgtcgtcttgtacggcattgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatc 6387  T

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Target: scaffold0095 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 9398 - 9484
Alignment:
Q  38 tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatcaatttcagtcaattataaattcaattaatgatttg 124  Q
    ||||||||||  ||| |||||| |||||||||||| ||  | |||||||||||| || ||||||||| | ||||||| || ||||||    
T  9398 tgtttgattttccgttttattgtggtgttcgtttggttatttttgaaagatcaacttaagtcaattacatattcaatcaacgatttg 9484  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 83500 - 83433
Alignment:
Q  25 ttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||||||   |||||||||| |||||||  |||||| ||| |||||||| ||||||||||||    
T  83500 ttgtcttgtgcggcgttgtttgatttctcgtcttcgtgcggtattcatttgattcatattgaaagatc 83433  T

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Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 83348 - 83289
Alignment:
Q  186 tttgtaggcatttta--ccgttgtatgctattaacttgggtgttgttagtttgtttgcag 243  Q
    ||||||||||| |||  ||||| |||||||||||||||| |||||| |||||||| ||||    
T  83348 tttgtaggcatattatgccgttatatgctattaacttggatgttgtgagtttgttcgcag 83289  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 4130 - 4081
Alignment:
Q  38 tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaaga 87  Q
    ||||||||||   ||||||||| |||||||||||||||| ||||||||||    
T  4130 tgtttgatttcgtgtcttattgtggtgttcgtttgattcatattgaaaga 4081  T

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Target: scaffold0014 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 201443 - 201372
Alignment:
Q  16 tgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaa 84  Q
    |||||||||| |||||||||||   ||||||||||  |||||| ||| ||||||| |||||||| |||||||    
T  201443 tgttgttcgtagtcttgtgcggcgctgtttgatttcacgtcttcttgtggtgttcatttgattcatattgaa 201372  T

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Target: scaffold0064 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 19024 - 18976
Alignment:
Q  174 tttaccatattatttgtaggcattttaccgttgtatgctattaacttgg 222  Q
    |||| ||||||||||||| ||||||| ||||||||| ||||||| ||||    
T  19024 tttatcatattatttgtatgcattttgccgttgtatactattaatttgg 18976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 453936 - 454014
Alignment:
Q  14 tgtgttgttcgttgtcttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttgattcctattgaaagatc 89  Q
    |||||||||||| |||||| ||||   ||||||||||   ||||| ||||||||||| ||||| || ||||||||||||    
T  453936 tgtgttgttcgtcgtcttgggcggcgttgtttgattttcagtcttgttgcggtgttcatttgactcatattgaaagatc 454014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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