View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18396_high_27 (Length: 209)
Name: NF18396_high_27
Description: NF18396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18396_high_27 |
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Alignment Details
Target: chr2 (Bit Score: 189; Significance: 1e-103; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-103
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 40646674 - 40646866
Alignment:
| Q |
1 |
tcatcattttccgacaacccttcaacctcatacgccggttcaaccggattccatctctcaaccgatacatcaatctcaagcagaacatccttaacctctc |
100 |
Q |
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| T |
40646674 |
tcatcattttccgacaacccttcaacctcatacgccggttcaaccggattccatctctcaaccgatacatcaatctcaagcagaacatccttaacctctc |
40646773 |
T |
|
| Q |
101 |
ttcgcaactcactcccagaaaacccaaacatctacgacttctccgaaatctgttccgccacaaacaacttcctctccaaacgctactcttcct |
193 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
40646774 |
ttcgcaactcactcccagaaaacccaaacatctacgacttctccgaaatctgttccgccacaaataacttcctctccaaacgctactcttcct |
40646866 |
T |
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