View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18396_low_20 (Length: 252)
Name: NF18396_low_20
Description: NF18396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18396_low_20 |
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Alignment Details
Target: chr1 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 18 - 224
Target Start/End: Original strand, 32376567 - 32376773
Alignment:
| Q |
18 |
ataatattttactttcttcaaataaatcttttcgaatatgaatatatttactgaatactcgcttaataggtttctcatgtaaaattcatcatgctttaaa |
117 |
Q |
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| T |
32376567 |
ataatattttactttcttcaaataaatcttttcgaatatgaatatatttactgaatactcgcttaataggtttctcatgtaaaattcgtcatgctttaaa |
32376666 |
T |
|
| Q |
118 |
ctaatcatattatgtttataagtataacaagtgtggctaatactttgacaatacaaacagacaagaggaataatttcatatccaacattaacaagaaaag |
217 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
32376667 |
ctaatcatattatgtttataagtataaaaagtgtggctaatactttgacaatacaaacatacaagaggaataatttcatatccaacattaacaagaaaag |
32376766 |
T |
|
| Q |
218 |
tgtaacc |
224 |
Q |
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||||||| |
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| T |
32376767 |
tgtaacc |
32376773 |
T |
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