View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18397_low_6 (Length: 277)
Name: NF18397_low_6
Description: NF18397
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18397_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 18 - 259
Target Start/End: Complemental strand, 48593917 - 48593670
Alignment:
| Q |
18 |
cactatatattcaatatttagtcataaaattgtaggattagtttagttatctcaatatctaatatcacataatataactccgtacctccgttgacattta |
117 |
Q |
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| T |
48593917 |
cactatatattcaatatttagtcataaaattgtaggattagtttagttatctcaatatctagtatcacataatataactccgtacctccgttgacattta |
48593818 |
T |
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| Q |
118 |
tagagacccttatacttgg------tattctttcaagaaagctataatttcttgttcttataccttgttattacattaataaagtaaggaatttccttat |
211 |
Q |
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||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48593817 |
tagagacccttatacttggtttgcatattctttcaagaaacctataatttcttgttcttataccttgttattacattaataaagtaaggaatttccttat |
48593718 |
T |
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| Q |
212 |
atttactgtttatgcctttagtttatcttgttttgtttatgatggaat |
259 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
48593717 |
atttacggtttatgcctttagtttatcttgttttgtttatgatggaat |
48593670 |
T |
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