View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18398_high_12 (Length: 440)

Name: NF18398_high_12
Description: NF18398
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18398_high_12
NF18398_high_12
[»] chr3 (17 HSPs)
chr3 (12-440)||(26289971-26290400)
chr3 (397-440)||(2620083-2620126)
chr3 (376-437)||(8383221-8383283)
chr3 (368-440)||(41961680-41961753)
chr3 (377-440)||(55401040-55401104)
chr3 (397-440)||(10268516-10268559)
chr3 (398-440)||(9800027-9800069)
chr3 (398-440)||(10954939-10954981)
chr3 (402-440)||(24633757-24633795)
chr3 (402-440)||(32804570-32804608)
chr3 (376-440)||(10335316-10335381)
chr3 (403-440)||(12703999-12704036)
chr3 (403-440)||(14840321-14840358)
chr3 (376-440)||(24205071-24205136)
chr3 (396-440)||(5441061-5441105)
chr3 (392-440)||(39756217-39756265)
chr3 (392-440)||(40052313-40052361)
[»] chr6 (21 HSPs)
chr6 (376-440)||(5732540-5732605)
chr6 (396-437)||(677822-677863)
chr6 (399-440)||(17341694-17341735)
chr6 (376-440)||(25096387-25096452)
chr6 (368-440)||(34595090-34595163)
chr6 (396-440)||(16833293-16833337)
chr6 (400-440)||(19040341-19040381)
chr6 (397-440)||(426544-426587)
chr6 (397-440)||(7265623-7265666)
chr6 (397-440)||(7930291-7930334)
chr6 (397-440)||(9027164-9027207)
chr6 (397-440)||(9658865-9658908)
chr6 (392-439)||(12868706-12868753)
chr6 (397-440)||(19044450-19044493)
chr6 (397-440)||(20371140-20371183)
chr6 (397-439)||(8777004-8777046)
chr6 (367-436)||(34073381-34073451)
chr6 (376-440)||(13360402-13360467)
chr6 (376-440)||(16766661-16766726)
chr6 (399-440)||(32313392-32313433)
chr6 (377-440)||(25038101-25038165)
[»] chr5 (17 HSPs)
chr5 (376-440)||(41995435-41995500)
chr5 (397-440)||(9449455-9449498)
chr5 (396-440)||(27144448-27144492)
chr5 (397-440)||(7175049-7175092)
chr5 (393-432)||(9878070-9878109)
chr5 (397-440)||(17123034-17123077)
chr5 (397-440)||(19552573-19552616)
chr5 (397-440)||(30098312-30098355)
chr5 (397-439)||(3966489-3966531)
chr5 (395-433)||(6035467-6035505)
chr5 (402-440)||(28588704-28588742)
chr5 (398-440)||(35017024-35017066)
chr5 (377-437)||(19820427-19820488)
chr5 (392-440)||(2436903-2436951)
chr5 (396-440)||(13808598-13808642)
chr5 (392-440)||(31084304-31084352)
chr5 (400-436)||(38816729-38816765)
[»] chr7 (23 HSPs)
chr7 (376-439)||(26329413-26329477)
chr7 (380-440)||(2425763-2425824)
chr7 (377-440)||(27945006-27945070)
chr7 (397-440)||(1433440-1433483)
chr7 (395-438)||(6630944-6630987)
chr7 (397-440)||(21828435-21828478)
chr7 (397-440)||(22868028-22868071)
chr7 (397-440)||(32308106-32308149)
chr7 (396-440)||(5307245-5307289)
chr7 (396-440)||(9408364-9408408)
chr7 (373-440)||(11722128-11722196)
chr7 (396-440)||(15902807-15902851)
chr7 (397-440)||(23191882-23191925)
chr7 (400-437)||(8046060-8046097)
chr7 (399-440)||(22602740-22602781)
chr7 (396-440)||(5233614-5233658)
chr7 (396-440)||(5835232-5835276)
chr7 (377-440)||(7438671-7438735)
chr7 (404-440)||(19206043-19206079)
chr7 (398-438)||(20549778-20549818)
chr7 (396-440)||(25791638-25791682)
chr7 (404-440)||(29787399-29787435)
chr7 (373-440)||(43249954-43250022)
[»] chr1 (17 HSPs)
chr1 (377-440)||(10572619-10572683)
chr1 (396-440)||(36878446-36878490)
chr1 (397-440)||(2896151-2896194)
chr1 (397-440)||(17831561-17831604)
chr1 (398-440)||(609488-609530)
chr1 (392-437)||(21530670-21530715)
chr1 (392-440)||(22881646-22881694)
chr1 (400-440)||(34298425-34298465)
chr1 (397-440)||(398795-398838)
chr1 (397-440)||(6427336-6427379)
chr1 (397-440)||(9103626-9103669)
chr1 (397-440)||(16812529-16812572)
chr1 (379-440)||(7918241-7918303)
chr1 (397-439)||(37598818-37598860)
chr1 (403-440)||(9828036-9828073)
chr1 (392-440)||(10475007-10475055)
chr1 (396-440)||(13997868-13997912)
[»] chr8 (10 HSPs)
chr8 (397-440)||(4786368-4786411)
chr8 (377-440)||(24362232-24362296)
chr8 (397-437)||(31109551-31109591)
chr8 (397-440)||(15816159-15816202)
chr8 (397-440)||(39954309-39954352)
chr8 (397-439)||(36450785-36450827)
chr8 (397-434)||(9382958-9382995)
chr8 (392-440)||(13844626-13844674)
chr8 (396-440)||(20679425-20679469)
chr8 (396-440)||(24669418-24669462)
[»] chr4 (11 HSPs)
chr4 (379-437)||(40742558-40742617)
chr4 (397-440)||(36635310-36635353)
chr4 (396-437)||(21539900-21539941)
chr4 (390-435)||(35723420-35723465)
chr4 (377-440)||(12895304-12895368)
chr4 (397-440)||(903908-903951)
chr4 (410-440)||(5775388-5775418)
chr4 (283-321)||(23824188-23824226)
chr4 (397-434)||(17345451-17345488)
chr4 (396-440)||(19482653-19482697)
chr4 (361-440)||(21945452-21945532)
[»] scaffold0022 (1 HSPs)
scaffold0022 (377-437)||(90808-90869)
[»] chr2 (13 HSPs)
chr2 (396-440)||(12464879-12464923)
chr2 (380-440)||(21782848-21782909)
chr2 (377-440)||(11670720-11670784)
chr2 (397-440)||(2331780-2331823)
chr2 (397-440)||(21616748-21616791)
chr2 (397-440)||(30404880-30404923)
chr2 (397-435)||(15972859-15972897)
chr2 (379-440)||(31018557-31018619)
chr2 (368-440)||(896169-896240)
chr2 (397-437)||(1239693-1239733)
chr2 (397-437)||(16069287-16069327)
chr2 (396-440)||(37411274-37411318)
chr2 (392-440)||(38117189-38117237)
[»] scaffold0306 (1 HSPs)
scaffold0306 (397-440)||(13386-13429)
[»] scaffold0152 (1 HSPs)
scaffold0152 (397-440)||(21898-21941)
[»] scaffold0018 (2 HSPs)
scaffold0018 (397-440)||(192279-192322)
scaffold0018 (397-437)||(178852-178892)
[»] scaffold0697 (1 HSPs)
scaffold0697 (392-437)||(1625-1670)
[»] scaffold0085 (1 HSPs)
scaffold0085 (396-440)||(26378-26422)
[»] scaffold0004 (1 HSPs)
scaffold0004 (397-440)||(92793-92836)
[»] scaffold0003 (1 HSPs)
scaffold0003 (367-440)||(241549-241623)
[»] scaffold0007 (1 HSPs)
scaffold0007 (376-440)||(225298-225363)


Alignment Details
Target: chr3 (Bit Score: 402; Significance: 0; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 12 - 440
Target Start/End: Original strand, 26289971 - 26290400
Alignment:
Q  12 tcatcatgtaaagcttatctagggaagctctaagtaaataggaattgtaagtgaatggaaagagcaaatttgcttaaaaatacaaacggagatgtaaatt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26289971 tcatcatgtaaagcttatctagggaagctctaagtaaataggaattgtaagtgaatggaaagagcaaatttgcttaaaaatacaaacggagatgtaaatt 26290070  T
Q  112 caggggtcatcgaa-aatactgatctacatatataaccatcggggaaaatgtgaatcaacaaggagacatcttaagtagtgttgtcaatcacggatagtg 210  Q
    || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  26290071 cacgggtcatcgaacaatactgatctacatatataaccatcggggaaaatgtgaatcaacaaggagacatcttaagtagtgttgtcaatcacggattgtg 26290170  T
Q  211 gaatatagcggtatgttcaaattatgcaaagctacaaggttataacaactattttactgattcatgtgttgcagaataatagcaatttgttaaaattccg 310  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26290171 gaatatagcggtatgttcaaattatgctaagctacaaggttataacaactattttactgattcatgtgttgcagaataatagcaatttgttaaaattccg 26290270  T
Q  311 ctaagctatagagttttagcaccgttatttgacaacacaggcctaattaattttactctataaagcacggacactggatacgacaagacactgacacgcc 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  26290271 ctaagctatagagttttagcaccgttatttgacaacacaggcctaattaattttactctataaagcaccgacaccggatacgacaagacactgacacgcc 26290370  T
Q  411 gacaccattaataatttgagaaaatcacat 440  Q
    ||||||||||||||||||||||||||||||    
T  26290371 gacaccattaataatttgagaaaatcacat 26290400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 397 - 440
Target Start/End: Complemental strand, 2620126 - 2620083
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||||||||||||||| |||| |||||||||||||||||    
T  2620126 gacactgacacgccgacaccactaatcatttgagaaaatcacat 2620083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 8383221 - 8383283
Alignment:
Q  376 cacggacactggatacgacaag-acactgacacgccgacaccattaataatttgagaaaatca 437  Q
    ||||||||||||| |||||| | ||| |||||||||||||||  |||||||||||||||||||    
T  8383221 cacggacactggacacgacacggacattgacacgccgacaccgctaataatttgagaaaatca 8383283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 41961753 - 41961680
Alignment:
Q  368 ctataaagcacggacactggatacgaca-agacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||| |||||||||||| ||| |||||| |||||||||||||||| ||| | ||||||||||| || |||||||    
T  41961753 ctatgaagcacggacaccggacacgacacagacactgacacgccgtcacaactaataatttgaaaatatcacat 41961680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 377 - 440
Target Start/End: Original strand, 55401040 - 55401104
Alignment:
Q  377 acggacactggatacgacaag-acactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||| |||||||||| | ||||||| |||||||||| | ||||||||||| ||||||||||    
T  55401040 acggacaccggatacgacacggacactgatacgccgacacaactaataatttgaaaaaatcacat 55401104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 440
Target Start/End: Complemental strand, 10268559 - 10268516
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||||||||  |||||||||||| ||||||||||    
T  10268559 gacactgacacgccgacacagttaataatttgaaaaaatcacat 10268516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 9800027 - 9800069
Alignment:
Q  398 acactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||||||||  ||||||||||||||||| ||||    
T  9800027 acactgacacgccgacacctctaataatttgagaaaattacat 9800069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 10954939 - 10954981
Alignment:
Q  398 acactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||||||| | ||||||||||| ||||||||||    
T  10954939 acactgacacgccgacacaactaataatttgaaaaaatcacat 10954981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 440
Target Start/End: Original strand, 24633757 - 24633795
Alignment:
Q  402 tgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  24633757 tgacatgccgacaccactaataatttgagaaaatcacat 24633795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 440
Target Start/End: Complemental strand, 32804608 - 32804570
Alignment:
Q  402 tgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  32804608 tgacatgccgacaccgttaataatttgagaaaatcacat 32804570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 440
Target Start/End: Complemental strand, 10335381 - 10335316
Alignment:
Q  376 cacggacactggatacgacaag-acactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||| ||| |||||| | |||||||||||||||||| | ||||||||||| ||| ||||||    
T  10335381 cacggacaccggacacgacacggacactgacacgccgacacaactaataatttgaaaaagtcacat 10335316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 440
Target Start/End: Original strand, 12703999 - 12704036
Alignment:
Q  403 gacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  12703999 gacacgccgacaccactaataatttgagaaaagcacat 12704036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 440
Target Start/End: Complemental strand, 14840358 - 14840321
Alignment:
Q  403 gacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  14840358 gacacgccaacaccattaataatttcagaaaatcacat 14840321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 440
Target Start/End: Complemental strand, 24205136 - 24205071
Alignment:
Q  376 cacggacactggatacgacaag-acactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||| ||| |||||| | ||||||||||||||||||   ||||||||||||||||| ||||    
T  24205136 cacggacaccggacacgacacggacactgacacgccgacacggataataatttgagaaaatgacat 24205071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 440
Target Start/End: Complemental strand, 5441105 - 5441061
Alignment:
Q  396 agacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||||| ||||  ||| ||||||||||||||||||    
T  5441105 agacactgacacgccgtcaccgctaaaaatttgagaaaatcacat 5441061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 440
Target Start/End: Original strand, 39756217 - 39756265
Alignment:
Q  392 gacaagacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||| ||||||||||||||||||  ||||||||||| | ||||||||||    
T  39756217 gacacgacactgacacgccgacaaaattaataatttaaaaaaatcacat 39756265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 440
Target Start/End: Original strand, 40052313 - 40052361
Alignment:
Q  392 gacaagacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||| |||||||||||||||||||   ||||||||||| ||||||||||    
T  40052313 gacacgacactgacacgccgacacagctaataatttgaaaaaatcacat 40052361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 376 - 440
Target Start/End: Complemental strand, 5732605 - 5732540
Alignment:
Q  376 cacggacactggatacgacaag-acactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||||||| |||||| | ||||||||||||||||||| |||||||||||||||||||||||    
T  5732605 cacggacactggacacgacatggacactgacacgccgacaccgttaataatttgagaaaatcacat 5732540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 396 - 437
Target Start/End: Original strand, 677822 - 677863
Alignment:
Q  396 agacactgacacgccgacaccattaataatttgagaaaatca 437  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  677822 agacactgacacgccgacactgttaataatttgagaaaatca 677863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 399 - 440
Target Start/End: Complemental strand, 17341735 - 17341694
Alignment:
Q  399 cactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  17341735 cactgacacgccgacaccgttaataatttgataaaatcacat 17341694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 376 - 440
Target Start/End: Original strand, 25096387 - 25096452
Alignment:
Q  376 cacggacactggatacgaca-agacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||  |||||| ||| |||||| |||||| |||||||| ||||||||||||||||||||||    
T  25096387 cacggacatcggatacaacacagacaccgacacgacgacaccactaataatttgagaaaatcacat 25096452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 368 - 440
Target Start/End: Original strand, 34595090 - 34595163
Alignment:
Q  368 ctataaagcacggacactggatacgacaag-acactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||| |||||||||||| ||| |||||| | ||| |||||||||||||| | ||||||||||| ||||||||||    
T  34595090 ctatgaagcacggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaatcacat 34595163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 440
Target Start/End: Original strand, 16833293 - 16833337
Alignment:
Q  396 agacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||    
T  16833293 agacactgacacgccgacacaactaataatttgaaaaaatcacat 16833337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 400 - 440
Target Start/End: Original strand, 19040341 - 19040381
Alignment:
Q  400 actgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  19040341 actgacacgccgacaccgctaataatttgagaaaatcacat 19040381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 440
Target Start/End: Complemental strand, 426587 - 426544
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||||||||  |||||||||||| ||||||||||    
T  426587 gacactgacacgccgacacagttaataatttgaaaaaatcacat 426544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 440
Target Start/End: Complemental strand, 7265666 - 7265623
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||| |||||  ||||||||||||||||||||||    
T  7265666 gacactgacacgccaacaccgctaataatttgagaaaatcacat 7265623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 440
Target Start/End: Original strand, 7930291 - 7930334
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||| |||||||| ||||||||||||| ||||||||||    
T  7930291 gacactgacatgccgacacaattaataatttgaaaaaatcacat 7930334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 440
Target Start/End: Original strand, 9027164 - 9027207
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||    
T  9027164 gacactgacacgccgacaccgctaataatttgagataatcacat 9027207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 440
Target Start/End: Original strand, 9658865 - 9658908
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||||||||||||||  ||||||||| ||||||||||||    
T  9658865 gacactgacacgccgacaccgctaataatttaagaaaatcacat 9658908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 439
Target Start/End: Complemental strand, 12868753 - 12868706
Alignment:
Q  392 gacaagacactgacacgccgacaccattaataatttgagaaaatcaca 439  Q
    |||| |||||||||||||||||||  |||||||||||| |||||||||    
T  12868753 gacacgacactgacacgccgacacagttaataatttgaaaaaatcaca 12868706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 440
Target Start/End: Original strand, 19044450 - 19044493
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||||||||||||| | |||||||||||||| |||||||    
T  19044450 gacactgacacgccgacacgactaataatttgagaatatcacat 19044493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 440
Target Start/End: Complemental strand, 20371183 - 20371140
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||| |||||||||||||||  ||||||||||||||||||||||    
T  20371183 gacattgacacgccgacaccgctaataatttgagaaaatcacat 20371140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 439
Target Start/End: Complemental strand, 8777046 - 8777004
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcaca 439  Q
    ||||||||||||||||||| | ||||||||||| |||||||||    
T  8777046 gacactgacacgccgacacaactaataatttgaaaaaatcaca 8777004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 436
Target Start/End: Complemental strand, 34073451 - 34073381
Alignment:
Q  367 tctataaagcacggacactggatacgaca-agacactgacacgccgacaccattaataatttgagaaaatc 436  Q
    ||||| |||||||||||||||| ||||||  |||||||||| ||| ||| |  ||||||||||||||||||    
T  34073451 tctatgaagcacggacactggacacgacacggacactgacatgccaacatcgctaataatttgagaaaatc 34073381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 440
Target Start/End: Complemental strand, 13360467 - 13360402
Alignment:
Q  376 cacggacactggatacgacaaga-cactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||||||| |||| | || ||| |||||| |||||||| || |||||||||||||||||||    
T  13360467 cacggacactggacacgatacgaacacagacacgtcgacaccactagtaatttgagaaaatcacat 13360402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 440
Target Start/End: Original strand, 16766661 - 16766726
Alignment:
Q  376 cacggacactggatacgacaag-acactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||| ||| |||||| | ||||||||||||||||||   ||||||||||| ||||||||||    
T  16766661 cacggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcacat 16766726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 440
Target Start/End: Original strand, 32313392 - 32313433
Alignment:
Q  399 cactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||||||||||||| |||||| |||||||||| ||||    
T  32313392 cactgacacgccgacaccaataataagttgagaaaataacat 32313433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 377 - 440
Target Start/End: Complemental strand, 25038165 - 25038101
Alignment:
Q  377 acggacactggatacgaca-agacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||| || |||||||| ||| |||||||||  |||||| |||||||||||||||||| ||||    
T  25038165 acggacattgaatacgacacagatactgacacgttgacaccgttaataatttgagaaaattacat 25038101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 376 - 440
Target Start/End: Original strand, 41995435 - 41995500
Alignment:
Q  376 cacggacactggatacgaca-agacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||||||||| |||||||||||||||||||| | |||||||| || ||||||||||    
T  41995435 cacggacactggatacgacacagacactgacacgccgacacaactaataattcgaaaaaatcacat 41995500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 397 - 440
Target Start/End: Original strand, 9449455 - 9449498
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||    
T  9449455 gacactggcacgccgacaccaataataatttgagaaaatcacat 9449498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 440
Target Start/End: Original strand, 27144448 - 27144492
Alignment:
Q  396 agacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||||||||||  |||||||||||| |||||||||    
T  27144448 agacactgacacgccgacaccgctaataatttgaggaaatcacat 27144492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 440
Target Start/End: Complemental strand, 7175092 - 7175049
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||  ||||||| |||||||||||||||||||||||    
T  7175092 gacactgacacatcgacaccgttaataatttgagaaaatcacat 7175049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 432
Target Start/End: Complemental strand, 9878109 - 9878070
Alignment:
Q  393 acaagacactgacacgccgacaccattaataatttgagaa 432  Q
    |||||||||||||||| |||||||| ||||||||||||||    
T  9878109 acaagacactgacacgtcgacaccaataataatttgagaa 9878070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 440
Target Start/End: Original strand, 17123034 - 17123077
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||| |||||  ||||||||||||||||||||||    
T  17123034 gacactgacacgccaacaccgctaataatttgagaaaatcacat 17123077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 440
Target Start/End: Complemental strand, 19552616 - 19552573
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||||||||  |||||||||||| ||||||||||    
T  19552616 gacactgacacgccgacacagttaataatttgaaaaaatcacat 19552573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 440
Target Start/End: Original strand, 30098312 - 30098355
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||| ||| ||| |||||||||||||||||||||||    
T  30098312 gacactgacacgacgaaaccgttaataatttgagaaaatcacat 30098355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 439
Target Start/End: Original strand, 3966489 - 3966531
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcaca 439  Q
    |||||||||| |||||||||  |||||||||||||||||||||    
T  3966489 gacactgacatgccgacaccgctaataatttgagaaaatcaca 3966531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 433
Target Start/End: Original strand, 6035467 - 6035505
Alignment:
Q  395 aagacactgacacgccgacaccattaataatttgagaaa 433  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  6035467 aagacactgacacgccgacaccgctaataatttgagaaa 6035505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 440
Target Start/End: Complemental strand, 28588742 - 28588704
Alignment:
Q  402 tgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  28588742 tgacacgccgacaccggtaataatttgagaaaatcacat 28588704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 35017024 - 35017066
Alignment:
Q  398 acactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||| |||||||||| |||| ||||||||||||||||||||||    
T  35017024 acaccgacacgccgaaaccactaataatttgagaaaatcacat 35017066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 437
Target Start/End: Complemental strand, 19820488 - 19820427
Alignment:
Q  377 acggacactggatacgacaag-acactgacacgccgacaccattaataatttgagaaaatca 437  Q
    |||||||| ||| |||||| | |||||||||| ||||||||  |||||||||||||||||||    
T  19820488 acggacaccggacacgacacggacactgacactccgacaccgctaataatttgagaaaatca 19820427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 440
Target Start/End: Original strand, 2436903 - 2436951
Alignment:
Q  392 gacaagacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||| ||||||||||||||||||||  ||||||||||  ||||||||||    
T  2436903 gacacgacactgacacgccgacaccgctaataatttgcaaaaatcacat 2436951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 440
Target Start/End: Complemental strand, 13808642 - 13808598
Alignment:
Q  396 agacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||| ||| ||||| ||||| |||||||||||||||||||    
T  13808642 agacactgatacgtcgacatcattattaatttgagaaaatcacat 13808598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 440
Target Start/End: Original strand, 31084304 - 31084352
Alignment:
Q  392 gacaagacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||| |||||||||||||||||||   ||||||||||| ||||||||||    
T  31084304 gacacgacactgacacgccgacacagctaataatttgaaaaaatcacat 31084352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 436
Target Start/End: Complemental strand, 38816765 - 38816729
Alignment:
Q  400 actgacacgccgacaccattaataatttgagaaaatc 436  Q
    |||||||||||||||||  ||||||||||||||||||    
T  38816765 actgacacgccgacaccgctaataatttgagaaaatc 38816729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 376 - 439
Target Start/End: Complemental strand, 26329477 - 26329413
Alignment:
Q  376 cacggacactggatacgaca-agacactgacacgccgacaccattaataatttgagaaaatcaca 439  Q
    ||||||||||||| |||||| ||||||||||||||||||| | ||||||||||||||||| ||||    
T  26329477 cacggacactggacacgacacagacactgacacgccgacatcgttaataatttgagaaaaacaca 26329413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 440
Target Start/End: Complemental strand, 2425824 - 2425763
Alignment:
Q  380 gacactggatacgaca-agacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||| |||||| ||| |||||||||||| |||| |||||||||||||||||||||||    
T  2425824 gacactggacacgacacagatactgacacgccggcaccgttaataatttgagaaaatcacat 2425763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 440
Target Start/End: Original strand, 27945006 - 27945070
Alignment:
Q  377 acggacactggatacgacaag-acactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||| ||| |||||| | |||||||||||||||||||| ||||||||||||||||| ||||    
T  27945006 acggacaccggacacgacacggacactgacacgccgacaccactaataatttgagaaaattacat 27945070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 397 - 440
Target Start/End: Original strand, 1433440 - 1433483
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||| ||||||||||||||| |||||||||||||||||||||||    
T  1433440 gacattgacacgccgacaccgttaataatttgagaaaatcacat 1433483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 395 - 438
Target Start/End: Complemental strand, 6630987 - 6630944
Alignment:
Q  395 aagacactgacacgccgacaccattaataatttgagaaaatcac 438  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||    
T  6630987 aagacactgacacgccgacaccactaataatttgagaaagtcac 6630944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 397 - 440
Target Start/End: Complemental strand, 21828478 - 21828435
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||||||||| ||| |||||||||||||||||||    
T  21828478 gacactgacacgccgacaccgttagtaatttgagaaaatcacat 21828435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 397 - 440
Target Start/End: Original strand, 22868028 - 22868071
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||    
T  22868028 gacactgacacgccgacaccactaataatatgagaaaatcacat 22868071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 397 - 440
Target Start/End: Original strand, 32308106 - 32308149
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||||||||||||||  ||||||||||||||||||||||    
T  32308106 gacactgacacgccgacaccgctaataatttgagaaaatcacat 32308149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 440
Target Start/End: Original strand, 5307245 - 5307289
Alignment:
Q  396 agacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||    
T  5307245 agacattgacacgccgacaccacttataatttgagaaaatcacat 5307289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 440
Target Start/End: Complemental strand, 9408408 - 9408364
Alignment:
Q  396 agacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||| ||||||| ||||||||||||| ||||||||||    
T  9408408 agacactgacacaccgacacaattaataatttgaaaaaatcacat 9408364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 373 - 440
Target Start/End: Complemental strand, 11722196 - 11722128
Alignment:
Q  373 aagcacggacactggatacgacaag-acactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||| || ||| |||||| | |||||||||||||||||||  ||| ||||||||||||||||||    
T  11722196 aagcacggataccggacacgacacggacactgacacgccgacaccgctaacaatttgagaaaatcacat 11722128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 440
Target Start/End: Original strand, 15902807 - 15902851
Alignment:
Q  396 agacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||||| |||||||||| ||||||||||| ||||||||||    
T  15902807 agacactgacatgccgacaccaataataatttgataaaatcacat 15902851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 440
Target Start/End: Original strand, 23191882 - 23191925
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||| |||||||||||  ||||||||||||||||||||||    
T  23191882 gacactgatacgccgacaccgctaataatttgagaaaatcacat 23191925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Complemental strand, 8046097 - 8046060
Alignment:
Q  400 actgacacgccgacaccattaataatttgagaaaatca 437  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  8046097 actgacacgccaacaccactaataatttgagaaaatca 8046060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 440
Target Start/End: Complemental strand, 22602781 - 22602740
Alignment:
Q  399 cactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||||||| | ||| |||||||||||||||||    
T  22602781 cactgacacgccgacaccgtaaattatttgagaaaatcacat 22602740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 440
Target Start/End: Original strand, 5233614 - 5233658
Alignment:
Q  396 agacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||| |||| ||  |||||||||||||||||||||||    
T  5233614 agacactgacacaccgatacggttaataatttgagaaaatcacat 5233658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 440
Target Start/End: Original strand, 5835232 - 5835276
Alignment:
Q  396 agacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||| |||||||||||| ||||| ||||||||||| ||||    
T  5835232 agacactgatacgccgacaccactaatagtttgagaaaataacat 5835276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 377 - 440
Target Start/End: Original strand, 7438671 - 7438735
Alignment:
Q  377 acggacactggatacgaca-agacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||  |||||||||| | ||||||||| ||||||||  |||||||||||| ||||||||||    
T  7438671 acggacatcggatacgacataaacactgacatgccgacacagttaataatttgaaaaaatcacat 7438735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 440
Target Start/End: Original strand, 19206043 - 19206079
Alignment:
Q  404 acacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||  ||||||||||||||||||||||    
T  19206043 acacgccgacaccgctaataatttgagaaaatcacat 19206079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 398 - 438
Target Start/End: Original strand, 20549778 - 20549818
Alignment:
Q  398 acactgacacgccgacaccattaataatttgagaaaatcac 438  Q
    |||||||||| ||||||||  ||||||||||||||||||||    
T  20549778 acactgacacaccgacaccgctaataatttgagaaaatcac 20549818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 440
Target Start/End: Original strand, 25791638 - 25791682
Alignment:
Q  396 agacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||||||||||  |||| |||||||||| ||||||    
T  25791638 agacactgacacgccgacaccgctaattatttgagaaattcacat 25791682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 440
Target Start/End: Complemental strand, 29787435 - 29787399
Alignment:
Q  404 acacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||  ||||||||||||||||||||||    
T  29787435 acacgccgacaccgctaataatttgagaaaatcacat 29787399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 440
Target Start/End: Original strand, 43249954 - 43250022
Alignment:
Q  373 aagcacggacactggatacgacaag-acactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||| ||| | |||| | ||||||||||||||||||   ||||||||||||||||| ||||    
T  43249954 aagcacggacaccggacaagacacggacactgacacgccgacacggataataatttgagaaaatgacat 43250022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 377 - 440
Target Start/End: Complemental strand, 10572683 - 10572619
Alignment:
Q  377 acggacactggatacgacaaga-cactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||| ||| |||||| || ||||||||||||||||||| ||||||||||||||||||||||    
T  10572683 acggacaccggacacgacatgaacactgacacgccgacaccactaataatttgagaaaatcacat 10572619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 440
Target Start/End: Original strand, 36878446 - 36878490
Alignment:
Q  396 agacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||||||||||  ||||||||||||||||||||||    
T  36878446 agacactgacacgccgacaccgctaataatttgagaaaatcacat 36878490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 397 - 440
Target Start/End: Complemental strand, 2896194 - 2896151
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||||||||||||||  ||||||||||||||||||||||    
T  2896194 gacactgacacgccgacaccgctaataatttgagaaaatcacat 2896151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 397 - 440
Target Start/End: Complemental strand, 17831604 - 17831561
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||||||||||||||  ||||||||||||||||||||||    
T  17831604 gacactgacacgccgacaccgctaataatttgagaaaatcacat 17831561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 609530 - 609488
Alignment:
Q  398 acactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||||||||| ||||||||||||||||| ||||    
T  609530 acactgacacgccgacaccactaataatttgagaaaattacat 609488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 392 - 437
Target Start/End: Original strand, 21530670 - 21530715
Alignment:
Q  392 gacaagacactgacacgccgacaccattaataatttgagaaaatca 437  Q
    |||| ||||| |||||||||||||| ||||||||||||||||||||    
T  21530670 gacatgacacagacacgccgacaccgttaataatttgagaaaatca 21530715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 392 - 440
Target Start/End: Complemental strand, 22881694 - 22881646
Alignment:
Q  392 gacaagacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||| ||||||||||||||||||| | ||||||||||| ||||||||||    
T  22881694 gacacgacactgacacgccgacacaactaataatttgaaaaaatcacat 22881646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 400 - 440
Target Start/End: Original strand, 34298425 - 34298465
Alignment:
Q  400 actgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||| ||||||||| ||||||||||||||||||||||    
T  34298425 actgacacaccgacaccactaataatttgagaaaatcacat 34298465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 440
Target Start/End: Complemental strand, 398838 - 398795
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||    
T  398838 gacactgacacgccgacaccgctaataatttgaaaaaatcacat 398795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 440
Target Start/End: Original strand, 6427336 - 6427379
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||| |||||  ||||||||||||||||||||||    
T  6427336 gacactgacacgccaacaccgctaataatttgagaaaatcacat 6427379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 440
Target Start/End: Original strand, 9103626 - 9103669
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||||||||  |||||||||||| ||||||||||    
T  9103626 gacactgacacgccgacacagttaataatttgaaaaaatcacat 9103669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 440
Target Start/End: Original strand, 16812529 - 16812572
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||||    
T  16812529 gacactgacacaccgacaccaataataatttgacaaaatcacat 16812572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 379 - 440
Target Start/End: Complemental strand, 7918303 - 7918241
Alignment:
Q  379 ggacactggatacgaca-agacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||| ||| |||||| ||||| |||||||| |||| || ||||||||||||||||||||||    
T  7918303 ggacaccggacacgacacagacaatgacacgctgacatcactaataatttgagaaaatcacat 7918241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 439
Target Start/End: Original strand, 37598818 - 37598860
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcaca 439  Q
    ||||||||||||||||||| | ||||||||||| |||||||||    
T  37598818 gacactgacacgccgacacaactaataatttgaaaaaatcaca 37598860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 440
Target Start/End: Original strand, 9828036 - 9828073
Alignment:
Q  403 gacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  9828036 gacacgccgacaccactaataatttgataaaatcacat 9828073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 440
Target Start/End: Complemental strand, 10475055 - 10475007
Alignment:
Q  392 gacaagacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||| |||| |||||||||||||||  |||||| |||||||||||||||    
T  10475055 gacacgacattgacacgccgacaccgctaataacttgagaaaatcacat 10475007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 440
Target Start/End: Original strand, 13997868 - 13997912
Alignment:
Q  396 agacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||||||||||||||| ||||| |||| | ||||||||||    
T  13997868 agacactgacacgccgacaccgttaattatttaaaaaaatcacat 13997912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 440
Target Start/End: Complemental strand, 4786411 - 4786368
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  4786411 gacactgacacgccgacaccattaataatttaagaaaatcacat 4786368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 440
Target Start/End: Complemental strand, 24362296 - 24362232
Alignment:
Q  377 acggacactggatacgaca-agacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||| |||||||||| |||||| ||||||||||||||  ||||||||||||| ||||||||    
T  24362296 acggacaccggatacgacacagacaccgacacgccgacaccgctaataatttgagagaatcacat 24362232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 437
Target Start/End: Complemental strand, 31109591 - 31109551
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatca 437  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  31109591 gacactgacacgccgacaccgttaataatttgagaaaatca 31109551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 440
Target Start/End: Complemental strand, 15816202 - 15816159
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||||||||||||| | ||||||||||| ||||||||||    
T  15816202 gacactgacacgccgacacaactaataatttgaaaaaatcacat 15816159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 440
Target Start/End: Complemental strand, 39954352 - 39954309
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||| ||||||||||||||  ||||||||||||||||||||||    
T  39954352 gacaccgacacgccgacaccgctaataatttgagaaaatcacat 39954309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 439
Target Start/End: Complemental strand, 36450827 - 36450785
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcaca 439  Q
    ||||||||||||||||||| | ||||||||||| |||||||||    
T  36450827 gacactgacacgccgacacaactaataatttgaaaaaatcaca 36450785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 434
Target Start/End: Original strand, 9382958 - 9382995
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaa 434  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  9382958 gacactgacacgccgataccatgaataatttgagaaaa 9382995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 440
Target Start/End: Complemental strand, 13844674 - 13844626
Alignment:
Q  392 gacaagacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||| ||||| |||||||||||||   ||||||||||||||||||||||    
T  13844674 gacacgacacggacacgccgacactgctaataatttgagaaaatcacat 13844626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 440
Target Start/End: Complemental strand, 20679469 - 20679425
Alignment:
Q  396 agacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||||| | |||||||  ||||||||||||||||||||||    
T  20679469 agacactgacatgtcgacacccctaataatttgagaaaatcacat 20679425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 440
Target Start/End: Original strand, 24669418 - 24669462
Alignment:
Q  396 agacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||| |||||| ||||||||||||| |||| ||||    
T  24669418 agacactgacacgctgacaccgttaataatttgaggaaattacat 24669462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 437
Target Start/End: Original strand, 40742558 - 40742617
Alignment:
Q  379 ggacactggatacgacaag-acactgacacgccgacaccattaataatttgagaaaatca 437  Q
    ||||||||||||||||| | ||| ||| ||||||||||||||||||||||||||||||||    
T  40742558 ggacactggatacgacacggacattgaaacgccgacaccattaataatttgagaaaatca 40742617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 397 - 440
Target Start/End: Original strand, 36635310 - 36635353
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||| |||||| ||||||||||||||||||||||    
T  36635310 gacactgacacgccaacaccactaataatttgagaaaatcacat 36635353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 396 - 437
Target Start/End: Complemental strand, 21539941 - 21539900
Alignment:
Q  396 agacactgacacgccgacaccattaataatttgagaaaatca 437  Q
    ||||||||||| |||||||||||||||||||| |||||||||    
T  21539941 agacactgacatgccgacaccattaataatttaagaaaatca 21539900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 390 - 435
Target Start/End: Complemental strand, 35723465 - 35723420
Alignment:
Q  390 acgacaagacactgacacgccgacaccattaataatttgagaaaat 435  Q
    |||||| ||||||||||||||||||||  |||||||||||||||||    
T  35723465 acgacatgacactgacacgccgacaccgctaataatttgagaaaat 35723420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 377 - 440
Target Start/End: Complemental strand, 12895368 - 12895304
Alignment:
Q  377 acggacactggatacgacaaga-cactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||| |||||||||| || || |||||||||||||| | ||||||||||| ||||||||||    
T  12895368 acggacaccggatacgacacgaacaatgacacgccgacacaaataataatttgaaaaaatcacat 12895304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 440
Target Start/End: Original strand, 903908 - 903951
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||||| ||| |||| |||||||||||||||||||||||    
T  903908 gacactgacacaccggcaccgttaataatttgagaaaatcacat 903951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 440
Target Start/End: Complemental strand, 5775418 - 5775388
Alignment:
Q  410 cgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||||||||||||||||||||    
T  5775418 cgacaccattaataatttgagaaaatcacat 5775388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 321
Target Start/End: Complemental strand, 23824226 - 23824188
Alignment:
Q  283 agaataatagcaatttgttaaaattccgctaagctatag 321  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  23824226 agaataatagcaatttgttcaaattcagctaagctatag 23824188  T

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Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 434
Target Start/End: Complemental strand, 17345488 - 17345451
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaa 434  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  17345488 gacactgacacgccgacaccgctaataatttgagaaaa 17345451  T

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Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 440
Target Start/End: Original strand, 19482653 - 19482697
Alignment:
Q  396 agacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||||||||| | ||||||||||| || |||||||    
T  19482653 agacactgacacgccgacacaactaataatttgaaaatatcacat 19482697  T

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Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 21945452 - 21945532
Alignment:
Q  361 ttttactctataaagcacggacactggatacgaca-agacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||| |||||| |||||||||||| ||| | |||| ||||||||||| ||||||||   ||||||||||| ||||| ||||    
T  21945452 ttttgctctatgaagcacggacaccggacatgacacagacactgacatgccgacacagctaataatttgaaaaaatgacat 21945532  T

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Target: scaffold0022 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 437
Target Start/End: Original strand, 90808 - 90869
Alignment:
Q  377 acggacactggatacgaca-agacactgacacgccgacaccattaataatttgagaaaatca 437  Q
    ||||| |||||| |||||| |||||||||||| || ||||||||||||||||||||||||||    
T  90808 acggatactggacacgacacagacactgacacaccaacaccattaataatttgagaaaatca 90869  T

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Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 440
Target Start/End: Complemental strand, 12464923 - 12464879
Alignment:
Q  396 agacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||    
T  12464923 agacactgacacgccgacaccaataataatttgagaaaatgacat 12464879  T

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Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 380 - 440
Target Start/End: Complemental strand, 21782909 - 21782848
Alignment:
Q  380 gacactggatacgaca-agacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||| |||||| | ||||||||||||||||||   ||||||||||||||||||||||    
T  21782909 gacactggacacgacacaaacactgacacgccgacactgctaataatttgagaaaatcacat 21782848  T

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Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 377 - 440
Target Start/End: Original strand, 11670720 - 11670784
Alignment:
Q  377 acggacactggatacgaca-agacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||| | |||||||| ||||||||||||| |||| ||| ||||||||||| ||||||||||    
T  11670720 acggacaccgaatacgacatagacactgacacgtcgacgccactaataatttgaaaaaatcacat 11670784  T

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Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 440
Target Start/End: Original strand, 2331780 - 2331823
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||| ||||||||  |||||||||||||||||||||||||||||    
T  2331780 gacattgacacgcaaacaccattaataatttgagaaaatcacat 2331823  T

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Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 440
Target Start/End: Original strand, 21616748 - 21616791
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||| ||||||||||||||  ||||||||||||||||||||||    
T  21616748 gacacggacacgccgacaccgctaataatttgagaaaatcacat 21616791  T

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Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 440
Target Start/End: Complemental strand, 30404923 - 30404880
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||||||||  |||||||||||| ||||||||||    
T  30404923 gacactgacacgccgacacggttaataatttgaaaaaatcacat 30404880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 435
Target Start/End: Original strand, 15972859 - 15972897
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaat 435  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  15972859 gacactgacacgccgacacaattaataatttgaaaaaat 15972897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 379 - 440
Target Start/End: Original strand, 31018557 - 31018619
Alignment:
Q  379 ggacactggatacgacaag-acactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||| |||||||||| | ||||||||||||| |||||  ||||||||| ||||||||||||    
T  31018557 ggacaccggatacgacatggacactgacacgccaacaccgctaataatttcagaaaatcacat 31018619  T

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Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 440
Target Start/End: Original strand, 896169 - 896240
Alignment:
Q  368 ctataaagcacggacactggatacgacaagacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||| ||||| |||||| ||| ||||||  ||||||||||||||||||   ||||| ||||||||||||||||    
T  896169 ctatgaagcatggacaccggacacgacac-acactgacacgccgacactgctaatagtttgagaaaatcacat 896240  T

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Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 437
Target Start/End: Complemental strand, 1239733 - 1239693
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatca 437  Q
    ||||| |||||||||||| |||||||||||| |||||||||    
T  1239733 gacacggacacgccgacatcattaataatttaagaaaatca 1239693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 437
Target Start/End: Complemental strand, 16069327 - 16069287
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatca 437  Q
    |||||||||||||||||||| |||||||||| | |||||||    
T  16069327 gacactgacacgccgacaccgttaataatttaaaaaaatca 16069287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 440
Target Start/End: Complemental strand, 37411318 - 37411274
Alignment:
Q  396 agacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||| |||||| |||||||||  ||||||||||||||||||||||    
T  37411318 agacgctgacatgccgacaccgctaataatttgagaaaatcacat 37411274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 440
Target Start/End: Complemental strand, 38117237 - 38117189
Alignment:
Q  392 gacaagacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||| |||||||||||||||||||   ||||||||||| ||||||||||    
T  38117237 gacacgacactgacacgccgacacagctaataatttgaaaaaatcacat 38117189  T

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Target: scaffold0306 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 397 - 440
Target Start/End: Original strand, 13386 - 13429
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||||||||||||| | ||||||||||||||||||||||    
T  13386 gacactgacacgccgacacaactaataatttgagaaaatcacat 13429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 397 - 440
Target Start/End: Complemental strand, 21941 - 21898
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||||||||||||| | ||||||||||||||||||||||    
T  21941 gacactgacacgccgacacaactaataatttgagaaaatcacat 21898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 397 - 440
Target Start/End: Complemental strand, 192322 - 192279
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    |||||||||||||||||||| |||||||||||||||||| ||||    
T  192322 gacactgacacgccgacaccgttaataatttgagaaaattacat 192279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 437
Target Start/End: Complemental strand, 178892 - 178852
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatca 437  Q
    ||||||||||||||||||| | ||||||||||| |||||||    
T  178892 gacactgacacgccgacacaactaataatttgaaaaaatca 178852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 392 - 437
Target Start/End: Original strand, 1625 - 1670
Alignment:
Q  392 gacaagacactgacacgccgacaccattaataatttgagaaaatca 437  Q
    |||| ||||| |||||||||||||| ||||||||||||||||||||    
T  1625 gacatgacacagacacgccgacaccgttaataatttgagaaaatca 1670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 440
Target Start/End: Original strand, 26378 - 26422
Alignment:
Q  396 agacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||| ||||||| |||||||| ||||||||||||||||||||||    
T  26378 agacagtgacacgtcgacaccactaataatttgagaaaatcacat 26422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 440
Target Start/End: Original strand, 92793 - 92836
Alignment:
Q  397 gacactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||||||||||||||  ||||||||||||||||| ||||    
T  92793 gacactgacacgccgacaccgctaataatttgagaaaattacat 92836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 440
Target Start/End: Original strand, 241549 - 241623
Alignment:
Q  367 tctataaagcacggacactggatacgacaag-acactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||| |||||||||||| ||| |||||| | ||||||||||||||||||   ||||||||||  ||||||||||    
T  241549 tctatgaagcacggacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaatcacat 241623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 440
Target Start/End: Complemental strand, 225363 - 225298
Alignment:
Q  376 cacggacactggatacgacaag-acactgacacgccgacaccattaataatttgagaaaatcacat 440  Q
    ||||||||| ||| |||||| | ||||||||||||||||||   ||||||||||||||||| ||||    
T  225363 cacggacaccggacacgacacggacactgacacgccgacacagataataatttgagaaaatgacat 225298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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