View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18398_high_35 (Length: 302)

Name: NF18398_high_35
Description: NF18398
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18398_high_35
NF18398_high_35
[»] chr3 (18 HSPs)
chr3 (1-283)||(39670122-39670400)
chr3 (217-280)||(51419283-51419346)
chr3 (230-283)||(9563110-9563163)
chr3 (217-277)||(26141453-26141513)
chr3 (228-283)||(11347856-11347911)
chr3 (217-283)||(41189687-41189753)
chr3 (217-282)||(20764838-20764903)
chr3 (228-283)||(33644311-33644366)
chr3 (228-283)||(49607525-49607580)
chr3 (228-283)||(53982122-53982177)
chr3 (217-283)||(26754806-26754872)
chr3 (217-283)||(42823222-42823288)
chr3 (217-283)||(48375629-48375695)
chr3 (228-282)||(52629412-52629466)
chr3 (228-282)||(54868829-54868883)
chr3 (228-281)||(33118784-33118837)
chr3 (234-282)||(21746128-21746176)
chr3 (251-283)||(36707385-36707417)
[»] chr6 (9 HSPs)
chr6 (217-284)||(31110684-31110751)
chr6 (228-283)||(17598665-17598720)
chr6 (217-283)||(31976359-31976425)
chr6 (228-283)||(11427729-11427784)
chr6 (228-283)||(29857938-29857993)
chr6 (228-283)||(32869789-32869844)
chr6 (217-283)||(15989965-15990031)
chr6 (221-283)||(22880585-22880647)
chr6 (217-283)||(30341283-30341349)
[»] chr8 (13 HSPs)
chr8 (221-283)||(42710221-42710283)
chr8 (217-283)||(43414504-43414570)
chr8 (228-283)||(34012230-34012285)
chr8 (217-283)||(5957941-5958007)
chr8 (217-283)||(37038590-37038656)
chr8 (228-283)||(14548033-14548088)
chr8 (228-283)||(15048115-15048170)
chr8 (228-283)||(40423877-40423932)
chr8 (228-282)||(504055-504109)
chr8 (217-283)||(30479397-30479463)
chr8 (217-283)||(32032835-32032901)
chr8 (217-283)||(34307327-34307393)
chr8 (228-280)||(23122531-23122583)
[»] chr5 (12 HSPs)
chr5 (228-283)||(18520818-18520873)
chr5 (228-283)||(36732876-36732931)
chr5 (217-283)||(15409533-15409599)
chr5 (228-283)||(33149572-33149627)
chr5 (217-283)||(31009099-31009165)
chr5 (228-282)||(35785311-35785365)
chr5 (228-280)||(31132448-31132500)
chr5 (228-283)||(14831925-14831980)
chr5 (217-283)||(2252091-2252157)
chr5 (217-283)||(3921188-3921254)
chr5 (228-281)||(2740387-2740440)
chr5 (217-282)||(21370116-21370181)
[»] chr2 (19 HSPs)
chr2 (228-283)||(17473131-17473186)
chr2 (228-283)||(28863566-28863621)
chr2 (217-283)||(2533234-2533300)
chr2 (228-282)||(7465669-7465723)
chr2 (228-283)||(19930754-19930809)
chr2 (217-283)||(20700926-20700992)
chr2 (234-282)||(4060797-4060845)
chr2 (228-283)||(13438454-13438509)
chr2 (217-280)||(36168950-36169013)
chr2 (217-280)||(40613825-40613888)
chr2 (228-283)||(42257304-42257359)
chr2 (217-283)||(3034906-3034972)
chr2 (217-259)||(3440114-3440156)
chr2 (228-282)||(28381589-28381643)
chr2 (244-282)||(33436050-33436088)
chr2 (228-282)||(40701590-40701644)
chr2 (230-283)||(9058591-9058644)
chr2 (250-283)||(17819960-17819993)
chr2 (217-282)||(17823900-17823965)
[»] scaffold0316 (1 HSPs)
scaffold0316 (217-283)||(17214-17280)
[»] chr7 (18 HSPs)
chr7 (228-282)||(11044290-11044344)
chr7 (217-282)||(35522988-35523053)
chr7 (217-280)||(16374747-16374810)
chr7 (228-283)||(19329953-19330008)
chr7 (236-283)||(26296755-26296802)
chr7 (228-283)||(38837328-38837383)
chr7 (217-283)||(12311015-12311081)
chr7 (217-283)||(41423793-41423859)
chr7 (234-283)||(31735988-31736037)
chr7 (217-277)||(46374747-46374807)
chr7 (228-283)||(8080317-8080372)
chr7 (217-283)||(22343472-22343538)
chr7 (228-282)||(40957819-40957873)
chr7 (217-283)||(41915852-41915918)
chr7 (217-283)||(46033724-46033790)
chr7 (217-278)||(21234517-21234578)
chr7 (234-283)||(38267151-38267200)
chr7 (228-280)||(3434666-3434718)
[»] chr4 (10 HSPs)
chr4 (229-283)||(480382-480436)
chr4 (217-283)||(50052351-50052417)
chr4 (217-282)||(41823994-41824059)
chr4 (228-283)||(41236458-41236513)
chr4 (228-283)||(42044301-42044356)
chr4 (217-283)||(50526094-50526160)
chr4 (234-283)||(11511402-11511451)
chr4 (228-283)||(24995041-24995096)
chr4 (217-283)||(29239997-29240063)
chr4 (217-282)||(31910304-31910369)
[»] chr1 (13 HSPs)
chr1 (217-283)||(32813358-32813424)
chr1 (228-283)||(27564669-27564724)
chr1 (228-283)||(37649309-37649364)
chr1 (228-283)||(38632255-38632310)
chr1 (228-283)||(48716216-48716271)
chr1 (217-283)||(49811450-49811516)
chr1 (217-283)||(51898606-51898672)
chr1 (235-282)||(3000431-3000478)
chr1 (228-283)||(26274540-26274595)
chr1 (235-282)||(38595266-38595313)
chr1 (228-283)||(41758916-41758971)
chr1 (244-283)||(45044510-45044549)
chr1 (251-283)||(37926395-37926427)
[»] scaffold0321 (1 HSPs)
scaffold0321 (228-283)||(10043-10098)
[»] scaffold0237 (1 HSPs)
scaffold0237 (228-283)||(4140-4195)
[»] scaffold1268 (1 HSPs)
scaffold1268 (217-283)||(852-918)
[»] scaffold1267 (1 HSPs)
scaffold1267 (217-283)||(852-918)


Alignment Details
Target: chr3 (Bit Score: 238; Significance: 1e-132; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 39670400 - 39670122
Alignment:
Q  1 gaagcaagtgaaatagagtacatatgtgttgcaatttatctctaacatgataaagattgatcatcacaatacataatggttgaattgataaaatggcaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  39670400 gaagcaagtgaaatagagtacatatgtgttgcaatttatctctaacatgataaagattgatcatcacaatacaaaatggttgaattgataaaatggcaat 39670301  T
Q  101 tttgctgatcattgaggaagatgatttatcattatatttcaaaaaacagtggaagtcatatacttgattcaaagaagattaaagttttattcatttattt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39670300 tttgctgatcattgaggaagatgatttatcattatatttcaaaaaacagtggaagtcatatacttgattcaaagaagattaaagttttattcatttattt 39670201  T
Q  201 ttaaataacaacatagatgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    ||||||||||||    |||||||||| ||| | |||||||||||||||| ||||||| ||||||||||| |||||||||||||    
T  39670200 ttaaataacaac----atgttacacagacatcatttatttccgtacacccttgtacatctcatacattaagaagagagaagag 39670122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 280
Target Start/End: Original strand, 51419283 - 51419346
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaa 280  Q
    |||||||| | ||||| ||||||||| |||||| ||||||||| ||||||||||||||||||||    
T  51419283 atgttacataaacaccttttatttccatacacccttgtacaccccatacattaggaagagagaa 51419346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 283
Target Start/End: Complemental strand, 9563163 - 9563110
Alignment:
Q  230 accctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||||| || |||||||||||||| ||||| |||||||||||||||||||    
T  9563163 accctttattcccatacacctttgtacaactcatgcattaggaagagagaagag 9563110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 277
Target Start/End: Original strand, 26141453 - 26141513
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagaga 277  Q
    |||||||| | ||||||||||||||| |||||  ||||||||| |||||||||||||||||    
T  26141453 atgttacatagacaccctttatttccatacactcttgtacaccccatacattaggaagaga 26141513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 283
Target Start/End: Original strand, 11347856 - 11347911
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||||||| || |||||| || |||||| |||||||||||||||||||||||    
T  11347856 acaccctttattcccatacacccttatacaccccatacattaggaagagagaagag 11347911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 41189687 - 41189753
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | ||||||||||||||| |||||  ||||||||  ||||||||||||||| |||||||    
T  41189687 atgttacatagacaccctttatttccatacactcttgtacactccatacattaggaagaaagaagag 41189753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 282
Target Start/End: Original strand, 20764838 - 20764903
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaaga 282  Q
    |||||||| | ||||| ||||||  | |||||| ||||||||| ||||||||||||||||||||||    
T  20764838 atgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaagagagaaga 20764903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 33644366 - 33644311
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||||||| || |||||| || |||||| ||| |||||||||||||||||||    
T  33644366 acaccctttattcccatacacccttatacaccccatgcattaggaagagagaagag 33644311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 49607580 - 49607525
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||||||| || |||||| |||||||| |||| ||||||||||||| |||||    
T  49607580 acaccctttattcccatacacccttgtacacgtcatgcattaggaagagaaaagag 49607525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 53982177 - 53982122
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||||||| || |||| | ||||||||| ||| |||||||||||||||||||    
T  53982177 acaccctttattcccatacaaccttgtacaccccatgcattaggaagagagaagag 53982122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 26754872 - 26754806
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | |||| |||||||||| ||||||||||||||||  |||   ||||||||||||||||    
T  26754872 atgttacatagacactctttatttccatacacctttgtacaccctatattctaggaagagagaagag 26754806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 42823288 - 42823222
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | ||||| |||| || | |||||| |||||||||||||  ||||||||||||||||||    
T  42823288 atgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagag 42823222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 48375629 - 48375695
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | ||||||||||||||| |||| |||||||||||  |||   ||||||||||||||||    
T  48375629 atgttacatagacaccctttatttccatacatctttgtacaccctatattctaggaagagagaagag 48375695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 52629466 - 52629412
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaaga 282  Q
    |||||| |||||||| |||||| ||||||| | ||| ||||||||||||||||||    
T  52629466 acacccattatttccatacacccttgtacatcccatgcattaggaagagagaaga 52629412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 54868829 - 54868883
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaaga 282  Q
    ||||| ||||||||| |||||| |||||||||  || ||||||||||||||||||    
T  54868829 acaccttttatttccatacacccttgtacaccctatgcattaggaagagagaaga 54868883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 33118784 - 33118837
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaag 281  Q
    ||||||||||||||| |||||| ||||||||| ||| || |||| |||||||||    
T  33118784 acaccctttatttccatacacccttgtacaccccatgcactagggagagagaag 33118837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 21746128 - 21746176
Alignment:
Q  234 tttatttccgtacacctttgtacacctcatacattaggaagagagaaga 282  Q
    ||||||| | |||||| |||||||||||||| ||| |||||||||||||    
T  21746128 tttatttacatacacccttgtacacctcatatatttggaagagagaaga 21746176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 283
Target Start/End: Original strand, 36707385 - 36707417
Alignment:
Q  251 ttgtacacctcatacattaggaagagagaagag 283  Q
    ||||||||||||| |||||||||||||||||||    
T  36707385 ttgtacacctcatgcattaggaagagagaagag 36707417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 217 - 284
Target Start/End: Original strand, 31110684 - 31110751
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagagt 284  Q
    |||||||| | ||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  31110684 atgttacatagacatcctttatttccatacacctttgtacaccccatacattaggaagagagaagagt 31110751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 17598720 - 17598665
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    ||||| ||||||||| |||||| ||||||||| ||| |||||||||||||||||||    
T  17598720 acaccttttatttccatacacccttgtacaccccatgcattaggaagagagaagag 17598665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 31976425 - 31976359
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | ||||| ||||||  | |||||| ||||||||| |||||||||||||||||||||||    
T  31976425 atgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaagagagaagag 31976359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 11427784 - 11427729
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    ||||||||||||  | |||||| ||||||||| ||| |||||||||||||||||||    
T  11427784 acaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagag 11427729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 29857993 - 29857938
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    ||||| |||||| || |||||| ||||||||| ||| |||||||||||||||||||    
T  29857993 acaccatttattcccatacacccttgtacaccccatgcattaggaagagagaagag 29857938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 32869844 - 32869789
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||||||| || |||| | ||||||||| ||| |||||||||||||||||||    
T  32869844 acaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagag 32869789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 15989965 - 15990031
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | ||||| |||| || | |||||| ||||||||| |||| ||||||||||||||||||    
T  15989965 atgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagag 15990031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 283
Target Start/End: Original strand, 22880585 - 22880647
Alignment:
Q  221 tacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||| ||||||| |||||| || |||||| ||||||||| |||  ||||||||||||||||||    
T  22880585 tacatatacaccatttattcccatacacccttgtacaccccatgtattaggaagagagaagag 22880647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 30341283 - 30341349
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | ||||| |||| || | |||||| ||||||||| |||| ||||||||||||||||||    
T  30341283 atgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagag 30341349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 283
Target Start/End: Original strand, 42710221 - 42710283
Alignment:
Q  221 tacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||| |||||||||||| || |||||| ||||||||| |||||||||||||||||||||||    
T  42710221 tacacagacaccctttattcccatacacccttgtacaccccatacattaggaagagagaagag 42710283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 43414504 - 43414570
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | |||||||||||| || |||||| ||||||||| |||||||||||||||||||||||    
T  43414504 atgttacatagacaccctttattgccatacacccttgtacaccccatacattaggaagagagaagag 43414570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 283
Target Start/End: Original strand, 34012230 - 34012285
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    ||||||||||||  |||||||| ||||||||| ||| |||||||||||||||||||    
T  34012230 acaccctttattctcgtacacccttgtacaccccatgcattaggaagagagaagag 34012285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 5958007 - 5957941
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | ||||||||||||  | |||||| ||||||||||||| || ||||||||||||||||    
T  5958007 atgttacataaacaccctttattctcatacacccttgtacacctcatgcactaggaagagagaagag 5957941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 37038656 - 37038590
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | ||||||||||||||  |||||| ||||||||| ||| || ||||||||||||||||    
T  37038656 atgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagag 37038590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 14548088 - 14548033
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||||||| || |||| | ||||||||| ||| |||||||||||||||||||    
T  14548088 acaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagag 14548033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 283
Target Start/End: Original strand, 15048115 - 15048170
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||||||| |  |||||| ||||||| | |||||||||||||||||||||||    
T  15048115 acaccctttattccgatacacccttgtacatcccatacattaggaagagagaagag 15048170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 283
Target Start/End: Original strand, 40423877 - 40423932
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    ||||| |||||| || |||||| |||||||||||||  ||||||||||||||||||    
T  40423877 acaccttttattcccatacacccttgtacacctcatgtattaggaagagagaagag 40423932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 504055 - 504109
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaaga 282  Q
    ||||||||||||  | |||||| ||||||||| ||| ||||||||||||||||||    
T  504055 acaccctttattctcatacacccttgtacaccccatgcattaggaagagagaaga 504109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 30479397 - 30479463
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | ||||| |||| || | |||||| |||||||||||||  ||||||||||||||||||    
T  30479397 atgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagag 30479463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 32032901 - 32032835
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | ||||| |||| || | |||||| |||||||||||||  ||||||||||||||||||    
T  32032901 atgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagag 32032835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 34307393 - 34307327
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | ||||| |||| || | |||||| ||||||||| |||| ||||||||||||||||||    
T  34307393 atgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagag 34307327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 23122531 - 23122583
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaa 280  Q
    ||||||||||||  | |||||| ||||||||| ||| ||||||||||||||||    
T  23122531 acaccctttattctcatacacccttgtacaccccatgcattaggaagagagaa 23122583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 283
Target Start/End: Original strand, 18520818 - 18520873
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    ||||||||||||| | |||||| ||||||||||||| |||||||||||||||||||    
T  18520818 acaccctttattttcatacacccttgtacacctcatgcattaggaagagagaagag 18520873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 283
Target Start/End: Original strand, 36732876 - 36732931
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||||||| || |||||| ||||||||||||| |||||||||||||||||||    
T  36732876 acaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagag 36732931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 15409533 - 15409599
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | ||||||||||||  | |||||| ||||||||| |||||||||||||||||||||||    
T  15409533 atgttacataaacaccctttattcgcatacacccttgtacaccccatacattaggaagagagaagag 15409599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 283
Target Start/End: Original strand, 33149572 - 33149627
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    ||||||||||||  |||||||| ||||||||| ||| |||||||||||||||||||    
T  33149572 acaccctttattctcgtacacccttgtacaccccatgcattaggaagagagaagag 33149627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 31009165 - 31009099
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | ||||||||||||  | |||||||||||||||| ||| || ||||||||||||||||    
T  31009165 atgttacatagacaccctttattctcatacacctttgtacaccccatgcactaggaagagagaagag 31009099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 35785365 - 35785311
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaaga 282  Q
    ||||| ||||||||| |||||| ||||||||| ||| ||||||||||||||||||    
T  35785365 acaccttttatttccatacacccttgtacaccccatgcattaggaagagagaaga 35785311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 31132500 - 31132448
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaa 280  Q
    ||||||||||||| | |||||| ||||||||||||| |||||| |||||||||    
T  31132500 acaccctttattttcatacacccttgtacacctcatgcattagaaagagagaa 31132448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 14831980 - 14831925
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||||||| || |||| | ||||||||| ||| |||||||||||||||||||    
T  14831980 acaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagag 14831925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 2252091 - 2252157
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | ||||| |||| || | |||||| ||||||||| |||| ||||||||||||||||||    
T  2252091 atgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagag 2252157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 3921188 - 3921254
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | ||||| |||| || | |||||| ||||||||| |||| ||||||||||||||||||    
T  3921188 atgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagag 3921254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 2740440 - 2740387
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaag 281  Q
    |||||||||||| || |||||| ||||||| | ||| |||||||||||||||||    
T  2740440 acaccctttattcccatacacccttgtacatcccatgcattaggaagagagaag 2740387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 21370181 - 21370116
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaaga 282  Q
    |||||||| | ||||||||||||| | |||||||||||||| || ||| | |||||||| ||||||    
T  21370181 atgttacataaacaccctttattttcatacacctttgtacatcttatatactaggaagaaagaaga 21370116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 17473186 - 17473131
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||||||| || |||||| ||||||||||||| |||||||||||||||||||    
T  17473186 acaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagag 17473131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 28863621 - 28863566
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||||||| || |||||| ||||||||||||| |||||||||||||||||||    
T  28863621 acaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagag 28863566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 2533300 - 2533234
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||| | |||||||||||||| || |||||| ||||||||| |||||||| ||||||||||||||    
T  2533300 atgttatatatacaccctttattcccatacacccttgtacaccccatacattgggaagagagaagag 2533234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 7465669 - 7465723
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaaga 282  Q
    |||||||||||| || |||||| ||||||||||||| ||||||||||||||||||    
T  7465669 acaccctttattcccatacacccttgtacacctcatgcattaggaagagagaaga 7465723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 283
Target Start/End: Original strand, 19930754 - 19930809
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    ||||| |||||| || |||||| ||||||||||||| |||||||||||||||||||    
T  19930754 acaccttttattcccatacacccttgtacacctcatgcattaggaagagagaagag 19930809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 20700992 - 20700926
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | |||||||||||| || |||||| ||||||||| ||| || ||||||||||||||||    
T  20700992 atgttacatagacaccctttattcccatacacccttgtacaccccatgcactaggaagagagaagag 20700926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 4060845 - 4060797
Alignment:
Q  234 tttatttccgtacacctttgtacacctcatacattaggaagagagaaga 282  Q
    ||||||||| |||||| ||||||||| ||| ||||||||||||||||||    
T  4060845 tttatttccatacacccttgtacaccccatgcattaggaagagagaaga 4060797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 13438509 - 13438454
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||||||| || |||| | ||||||||| ||| |||||||||||||||||||    
T  13438509 acaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagag 13438454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 280
Target Start/End: Complemental strand, 36169013 - 36168950
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaa 280  Q
    |||||||| | ||||||||||||  | |||||  ||||||||| ||||||||||||||||||||    
T  36169013 atgttacataaacaccctttattctcatacactcttgtacaccccatacattaggaagagagaa 36168950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 280
Target Start/End: Original strand, 40613825 - 40613888
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaa 280  Q
    |||||||| | |||||||||||| || |||||| ||||||||| ||||||||| ||||| ||||    
T  40613825 atgttacatagacaccctttattcccatacacccttgtacaccccatacattatgaagaaagaa 40613888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 42257359 - 42257304
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    ||||||||||||||  |||||  ||||||||| ||||||||||||||| |||||||    
T  42257359 acaccctttatttctatacactcttgtacaccccatacattaggaagaaagaagag 42257304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 3034906 - 3034972
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | ||||| |||| || | |||||||| |||||||||||  ||||||||||||||||||    
T  3034906 atgttacatagacaccttttaattgcatacaccttggtacacctcatgtattaggaagagagaagag 3034972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 3440156 - 3440114
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacc 259  Q
    |||||||| | ||||||||||||||| ||||||||||||||||    
T  3440156 atgttacatagacaccctttatttccatacacctttgtacacc 3440114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 28381589 - 28381643
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaaga 282  Q
    |||||||||||| || |||| | ||||||||| |||| |||||||||||||||||    
T  28381589 acaccctttattcccatacatccttgtacaccccatatattaggaagagagaaga 28381643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 33436050 - 33436088
Alignment:
Q  244 tacacctttgtacacctcatacattaggaagagagaaga 282  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  33436050 tacacccttgtacacctcatgcattaggaagagagaaga 33436088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 40701644 - 40701590
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaaga 282  Q
    ||||| ||||||||| |||||| |||||||||  || ||||||||||||||||||    
T  40701644 acaccttttatttccatacacccttgtacacccgatgcattaggaagagagaaga 40701590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 283
Target Start/End: Complemental strand, 9058644 - 9058591
Alignment:
Q  230 accctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||||| || |||||  ||||||||| ||| |||||||||||||||||||    
T  9058644 accctttattcccatacactcttgtacaccccatgcattaggaagagagaagag 9058591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 17819960 - 17819993
Alignment:
Q  250 tttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||||||||| |||||||||||||||||||    
T  17819960 tttgtacacctcatgcattaggaagagagaagag 17819993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 17823965 - 17823900
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaaga 282  Q
    |||||||| | ||| ||||||||| | |||||| ||||||||| |||| ||| |||||||||||||    
T  17823965 atgttacatagacatcctttatttacatacacccttgtacaccccatatatttggaagagagaaga 17823900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 17280 - 17214
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | ||||||||||||||| ||||||||||||||||| |||   ||||||||||||||||    
T  17280 atgttacatagacaccctttatttccatacacctttgtacaccttatattctaggaagagagaagag 17214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 11044344 - 11044290
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaaga 282  Q
    |||| |||||||| | |||||||||||||||||||| ||||||||||||||||||    
T  11044344 acactctttattttcatacacctttgtacacctcatgcattaggaagagagaaga 11044290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 35523053 - 35522988
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaaga 282  Q
    |||||||| | ||||| |||||| || |||||| ||||||||| ||||||||||||||||||||||    
T  35523053 atgttacataaacaccatttattcccatacacccttgtacaccccatacattaggaagagagaaga 35522988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 280
Target Start/End: Original strand, 16374747 - 16374810
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaa 280  Q
    |||||||| | ||||||||||||  | |||||||||||||||  ||||||||||||||||||||    
T  16374747 atgttacatagacaccctttattctcatacacctttgtacactccatacattaggaagagagaa 16374810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 19330008 - 19329953
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||||||| || |||||| ||||||||| ||| |||||||||||||||||||    
T  19330008 acaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagag 19329953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 283
Target Start/End: Complemental strand, 26296802 - 26296755
Alignment:
Q  236 tatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    ||||||| |||||| ||||||||||||||||||| |||||||||||||    
T  26296802 tatttccatacacccttgtacacctcatacattaagaagagagaagag 26296755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 38837383 - 38837328
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    ||||||||||||||| |||||| ||||||| | ||| |||||||||||||||||||    
T  38837383 acaccctttatttccatacacccttgtacatcccatgcattaggaagagagaagag 38837328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 12311081 - 12311015
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | ||||||||||||||| |||||||||||||| ||  || | ||||||||||||||||    
T  12311081 atgttacatagacaccctttatttccatacacctttgtacatcttgtatactaggaagagagaagag 12311015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 41423859 - 41423793
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | ||||||||||||  | |||||||||||||||| ||| || ||||||||||||||||    
T  41423859 atgttacataaacaccctttattctcatacacctttgtacaccccatgcactaggaagagagaagag 41423793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 283
Target Start/End: Complemental strand, 31736037 - 31735988
Alignment:
Q  234 tttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||| || |||||| ||||||||| |||||||||||||||||||||||    
T  31736037 tttattcccatacacccttgtacaccccatacattaggaagagagaagag 31735988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 277
Target Start/End: Original strand, 46374747 - 46374807
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagaga 277  Q
    |||||||| | ||||| |||||| || |||||| ||||||||| |||||||||||||||||    
T  46374747 atgttacatagacaccatttattcccatacacccttgtacaccccatacattaggaagaga 46374807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 283
Target Start/End: Original strand, 8080317 - 8080372
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||||||| || |||||| ||||||||| ||| || ||||||||||||||||    
T  8080317 acaccctttattcccatacacccttgtacaccccatgcaataggaagagagaagag 8080372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 22343538 - 22343472
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | ||||| |||| || | |||||| |||||||||||||  ||||||||||||||||||    
T  22343538 atgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagag 22343472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 40957873 - 40957819
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaaga 282  Q
    |||||| |||||| | |||||| ||||||||| ||| ||||||||||||||||||    
T  40957873 acacccattattttcatacacccttgtacaccccatgcattaggaagagagaaga 40957819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 41915918 - 41915852
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | ||||| |||| || | |||||| ||||||||| |||| ||||||||||||||||||    
T  41915918 atgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagag 41915852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 46033724 - 46033790
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | ||||| ||||||  | |||||| ||||||||| ||||||||||||| |||||||||    
T  46033724 atgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaatagagaagag 46033790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 21234578 - 21234517
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagag 278  Q
    |||||||| | ||||| ||||||  | |||||| ||||||||| ||||||||||||||||||    
T  21234578 atgttacatagacaccttttattctcatacaccattgtacaccccatacattaggaagagag 21234517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 283
Target Start/End: Complemental strand, 38267200 - 38267151
Alignment:
Q  234 tttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    ||||||||| |||||||| ||||| | ||| |||||||||||||||||||    
T  38267200 tttatttccatacaccttcgtacatcccatgcattaggaagagagaagag 38267151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 3434718 - 3434666
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaa 280  Q
    |||||||||||| || |||| | ||||||||| ||| ||||||||||||||||    
T  3434718 acaccctttattcccatacagccttgtacaccccatgcattaggaagagagaa 3434666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 283
Target Start/End: Original strand, 480382 - 480436
Alignment:
Q  229 caccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    ||||| |||||||| |||||||||||||||| ||| |||||||||||||||||||    
T  480382 cacccattatttccatacacctttgtacaccccatgcattaggaagagagaagag 480436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 50052351 - 50052417
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | |||||||||||| || ||||||||||||||||| || || ||||||||||||||||    
T  50052351 atgttacatagacaccctttattcccatacacctttgtacaccttatgcactaggaagagagaagag 50052417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 41824059 - 41823994
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaaga 282  Q
    |||||||| | ||||| ||||||  | |||||||||||||||||||| ||||||||||||||||||    
T  41824059 atgttacatagacaccatttattctcatacacctttgtacacctcatgcattaggaagagagaaga 41823994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 41236513 - 41236458
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||||||| || |||||| ||||||||| ||| |||||||||||||||||||    
T  41236513 acaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagag 41236458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 283
Target Start/End: Original strand, 42044301 - 42044356
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    ||||||||||||||| |||||| ||||||| | ||| |||||||||||||||||||    
T  42044301 acaccctttatttccatacacccttgtacatcccatgcattaggaagagagaagag 42044356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 50526094 - 50526160
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | ||||||||||||||  |||||| ||||||||| ||| || ||||||||||||||||    
T  50526094 atgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagag 50526160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 283
Target Start/End: Original strand, 11511402 - 11511451
Alignment:
Q  234 tttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    ||||||||| |||||| ||||||||||||| ||||| |||||||||||||    
T  11511402 tttatttccatacacccttgtacacctcatgcattaagaagagagaagag 11511451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 283
Target Start/End: Original strand, 24995041 - 24995096
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||||||| || |||||| ||||||||| ||| ||||| |||||||||||||    
T  24995041 acaccctttattcccatacaccattgtacaccccatgcattaagaagagagaagag 24995096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 29240063 - 29239997
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | |||||||||||| || |||||  ||||||||| ||| || ||||||||||||||||    
T  29240063 atgttacatagacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagag 29239997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 31910369 - 31910304
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaaga 282  Q
    |||||||| | ||||| |||||| || |||||  ||||||| | ||||||||||||||||||||||    
T  31910369 atgttacatagacaccatttattcccatacactcttgtacatcccatacattaggaagagagaaga 31910304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 32813424 - 32813358
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | ||||| |||||| || |||||| ||||||||| |||||||||||||||||||||||    
T  32813424 atgttacatagacaccatttattcccatacacccttgtacaccccatacattaggaagagagaagag 32813358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 283
Target Start/End: Original strand, 27564669 - 27564724
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||||||| || |||||| ||||||||| ||| |||||||||||||||||||    
T  27564669 acaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagag 27564724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 37649364 - 37649309
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||||||| || |||||| ||||||||| ||| |||||||||||||||||||    
T  37649364 acaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagag 37649309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 283
Target Start/End: Original strand, 38632255 - 38632310
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||||||| || |||||| ||||||||| ||| |||||||||||||||||||    
T  38632255 acaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagag 38632310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 283
Target Start/End: Original strand, 48716216 - 48716271
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||||||| || |||||| ||||||||| ||| |||||||||||||||||||    
T  48716216 acaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagag 48716271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 49811450 - 49811516
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | ||||||||||||  | |||||| |||| |||| |||||||||||||||||||||||    
T  49811450 atgttacatagacaccctttattctcatacacccttgtgcaccacatacattaggaagagagaagag 49811516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 51898606 - 51898672
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | ||||||||||||||  |||||| ||||||||| ||| || ||||||||||||||||    
T  51898606 atgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagag 51898672  T

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Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 282
Target Start/End: Complemental strand, 3000478 - 3000431
Alignment:
Q  235 ttatttccgtacacctttgtacacctcatacattaggaagagagaaga 282  Q
    |||||||| |||||| ||||||||| |||| |||||||||||||||||    
T  3000478 ttatttccatacacccttgtacaccccatatattaggaagagagaaga 3000431  T

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Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 26274595 - 26274540
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||||||| || |||||| |||| || ||||| |||||||||||||||||||    
T  26274595 acaccctttattcccatacacccttgtgcatctcatgcattaggaagagagaagag 26274540  T

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Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 282
Target Start/End: Complemental strand, 38595313 - 38595266
Alignment:
Q  235 ttatttccgtacacctttgtacacctcatacattaggaagagagaaga 282  Q
    |||||||| |||||| ||||||||| |||| |||||||||||||||||    
T  38595313 ttatttccatacacccttgtacaccccatatattaggaagagagaaga 38595266  T

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Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 41758971 - 41758916
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    ||||||||||||  | |||||| ||||||||| ||| |||||||||||||||||||    
T  41758971 acaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagag 41758916  T

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Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 283
Target Start/End: Original strand, 45044510 - 45044549
Alignment:
Q  244 tacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  45044510 tacacccttgtacaccccatacattaggaagagagaagag 45044549  T

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Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 283
Target Start/End: Original strand, 37926395 - 37926427
Alignment:
Q  251 ttgtacacctcatacattaggaagagagaagag 283  Q
    ||||||||| |||||||||||||||||||||||    
T  37926395 ttgtacaccccatacattaggaagagagaagag 37926427  T

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Target: scaffold0321 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 283
Target Start/End: Original strand, 10043 - 10098
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||| |||||||| |||||| |||||||||  || |||||||||||||||||||    
T  10043 acacccattatttccatacacccttgtacaccctatgcattaggaagagagaagag 10098  T

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Target: scaffold0237 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 4195 - 4140
Alignment:
Q  228 acaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    ||||| |||||| || |||||| ||||||||| ||| |||||||||||||||||||    
T  4195 acaccatttattcccatacacccttgtacaccccatgcattaggaagagagaagag 4140  T

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Target: scaffold1268 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 852 - 918
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | |||||||||||| || |||||  ||||||||| ||| || ||||||||||||||||    
T  852 atgttacataaacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagag 918  T

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Target: scaffold1267 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 852 - 918
Alignment:
Q  217 atgttacacatacaccctttatttccgtacacctttgtacacctcatacattaggaagagagaagag 283  Q
    |||||||| | |||||||||||| || |||||  ||||||||| ||| || ||||||||||||||||    
T  852 atgttacataaacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagag 918  T

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